AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58635

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58635.t1 MTR_2g437240 76.019 417 91 4 1 415 1 410 0.0 614
MS.gene58635.t1 MTR_2g438020 77.273 396 87 2 25 418 57 451 0.0 603
MS.gene58635.t1 MTR_2g437200 76.601 406 84 4 1 403 1 398 0.0 602
MS.gene58635.t1 MTR_2g437170 63.070 417 106 5 15 416 20 403 6.37e-176 497
MS.gene58635.t1 MTR_2g437150 62.708 421 105 6 15 418 20 405 2.13e-175 496
MS.gene58635.t1 MTR_2g437960 66.492 382 89 3 39 416 53 399 2.42e-173 491
MS.gene58635.t1 MTR_2g437960 66.492 382 89 3 39 416 53 399 9.67e-173 490
MS.gene58635.t1 MTR_2g437120 63.768 414 103 5 15 417 20 397 1.44e-172 489
MS.gene58635.t1 MTR_2g437100 61.283 421 108 6 3 403 10 395 4.07e-162 462
MS.gene58635.t1 MTR_2g437180 58.140 430 128 4 3 418 4 395 1.60e-161 460
MS.gene58635.t1 MTR_2g437160 57.143 434 133 6 1 417 12 409 9.26e-161 459
MS.gene58635.t1 MTR_2g076320 61.111 414 116 5 15 418 20 398 9.95e-161 458
MS.gene58635.t1 MTR_2g437990 60.386 414 118 6 15 418 20 397 1.48e-156 449
MS.gene58635.t1 MTR_2g438010 58.213 414 128 5 15 418 40 418 3.11e-156 448
MS.gene58635.t1 MTR_2g437940 55.916 431 110 7 3 418 4 369 1.41e-145 419
MS.gene58635.t1 MTR_2g437130 56.391 399 129 5 23 418 30 386 3.54e-142 410
MS.gene58635.t1 MTR_2g437080 48.744 398 161 5 22 415 24 382 5.48e-124 364
MS.gene58635.t1 MTR_2g437060 49.873 393 154 6 23 411 40 393 1.15e-123 364
MS.gene58635.t1 MTR_2g437260 47.952 415 169 8 1 410 1 373 1.39e-123 363
MS.gene58635.t1 MTR_2g437020 48.878 401 153 7 20 411 21 378 4.61e-120 354
MS.gene58635.t1 MTR_2g436440 47.089 395 164 6 26 415 34 388 6.40e-111 331
MS.gene58635.t1 MTR_2g437040 47.368 399 163 8 23 415 25 382 6.13e-110 328
MS.gene58635.t1 MTR_2g436400 46.194 381 163 5 31 407 39 381 9.99e-110 328
MS.gene58635.t1 MTR_4g119550 45.932 381 165 5 34 411 46 388 1.10e-109 328
MS.gene58635.t1 MTR_2g437030 44.557 395 174 6 26 415 114 468 1.05e-104 318
MS.gene58635.t1 MTR_2g436460 46.277 376 161 4 32 404 40 377 1.29e-98 299
MS.gene58635.t1 MTR_4g120380 43.280 372 171 3 32 401 37 370 2.22e-92 283
MS.gene58635.t1 MTR_2g437160 72.973 185 48 1 235 417 134 318 1.11e-90 277
MS.gene58635.t1 MTR_2g437160 31.276 243 102 5 1 181 12 251 1.92e-23 100
MS.gene58635.t1 MTR_4g119580 42.819 376 173 5 30 401 33 370 1.71e-88 273
MS.gene58635.t1 MTR_4g120380 43.014 365 169 3 32 395 37 363 2.99e-88 274
MS.gene58635.t1 MTR_2g019810 42.893 401 170 9 12 403 9 359 5.57e-82 256
MS.gene58635.t1 MTR_2g019840 40.750 400 192 8 8 403 13 371 3.26e-80 252
MS.gene58635.t1 MTR_2g437090 55.556 171 74 1 248 416 1 171 4.89e-62 198
MS.gene58635.t1 MTR_4g119570 39.286 252 115 4 152 401 14 229 3.11e-49 167
MS.gene58635.t1 MTR_3g085240 46.371 248 73 8 1 244 21 212 7.83e-48 164
MS.gene58635.t1 MTR_3g085240 57.778 90 19 2 307 394 176 248 2.22e-21 93.2
MS.gene58635.t1 MTR_3g450500 29.459 370 217 4 25 388 24 355 1.86e-46 164
MS.gene58635.t1 MTR_4g007490 29.787 376 216 8 20 388 19 353 1.91e-41 150
MS.gene58635.t1 MTR_2g436370 39.286 196 79 4 31 224 38 195 5.93e-35 129
MS.gene58635.t1 MTR_8g081000 28.402 338 201 4 68 401 85 385 5.09e-34 131
MS.gene58635.t1 MTR_8g081000 28.402 338 201 4 68 401 85 385 5.46e-34 131
MS.gene58635.t1 MTR_8g081000 28.402 338 201 4 68 401 85 385 7.78e-34 130
MS.gene58635.t1 MTR_8g080990 28.916 332 195 5 70 397 74 368 8.86e-32 124
MS.gene58635.t1 MTR_4g049400 40.854 164 79 4 1 146 1 164 3.94e-28 111
MS.gene58635.t1 MTR_2g436380 44.444 99 52 1 248 346 1 96 9.13e-19 86.3
MS.gene58635.t1 MTR_8g012210 22.086 326 218 10 115 417 58 370 3.32e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58635.t1 AT5G07900 31.233 365 211 4 41 400 70 399 5.90e-55 187
MS.gene58635.t1 AT1G21150 31.161 353 205 3 41 390 57 374 2.07e-45 162
MS.gene58635.t1 AT1G21150 31.161 353 205 3 41 390 121 438 7.37e-45 162
MS.gene58635.t1 AT1G21150 30.532 357 210 3 37 390 17 338 1.67e-44 158
MS.gene58635.t1 AT1G61990 27.763 389 197 6 41 390 53 396 3.93e-37 140
MS.gene58635.t1 AT1G61990 27.763 389 197 6 41 390 53 396 3.93e-37 140
MS.gene58635.t1 AT1G61980 29.262 393 203 9 41 396 53 407 7.66e-37 139
MS.gene58635.t1 AT1G61980 29.262 393 203 9 41 396 53 407 7.66e-37 139
MS.gene58635.t1 AT1G61980 29.262 393 203 9 41 396 53 407 7.66e-37 139
MS.gene58635.t1 AT1G62120 29.032 403 213 7 32 397 48 414 1.02e-36 139
MS.gene58635.t1 AT1G61970 27.320 388 201 9 41 388 53 399 1.76e-34 133
MS.gene58635.t1 AT1G61970 27.320 388 201 9 41 388 53 399 1.76e-34 133
MS.gene58635.t1 AT1G61970 27.320 388 201 9 41 388 53 399 1.76e-34 133
MS.gene58635.t1 AT1G61970 27.320 388 201 9 41 388 53 399 1.76e-34 133
MS.gene58635.t1 AT1G61970 27.320 388 201 9 41 388 53 399 1.76e-34 133
MS.gene58635.t1 AT1G61970 27.320 388 201 9 41 388 53 399 1.76e-34 133
MS.gene58635.t1 AT1G61970 27.320 388 201 9 41 388 53 399 1.76e-34 133
MS.gene58635.t1 AT5G64950 26.440 382 223 8 26 390 22 362 1.39e-31 124
MS.gene58635.t1 AT3G46950 29.781 319 167 7 12 320 20 291 2.00e-29 119
MS.gene58635.t1 AT1G61960 26.265 415 253 13 41 413 53 456 7.01e-28 115
MS.gene58635.t1 AT1G62150 24.566 403 252 10 41 399 59 453 8.19e-28 115
MS.gene58635.t1 AT1G62085 25.840 387 245 10 41 388 56 439 1.19e-27 114
MS.gene58635.t1 AT1G62085 25.840 387 245 10 41 388 56 439 1.19e-27 114
MS.gene58635.t1 AT1G62110 28.369 282 159 4 41 318 53 295 6.43e-24 103
MS.gene58635.t1 AT5G23930 26.526 426 267 11 2 392 21 435 1.03e-23 103
MS.gene58635.t1 AT1G56380 23.238 383 259 12 35 397 10 377 8.87e-17 82.0
MS.gene58635.t1 AT1G56380 23.238 383 259 12 35 397 21 388 1.05e-16 82.0
MS.gene58635.t1 AT2G44020 22.148 298 223 3 75 366 147 441 2.77e-12 68.9
MS.gene58635.t1 AT1G79220 22.601 323 226 10 112 417 84 399 2.95e-11 65.1

Find 69 sgRNAs with CRISPR-Local

Find 93 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAATTTGATGGCTGATTT+TGG 0.115073 2.3:+54033142 MS.gene58635:CDS
GCCATCTATATTTGGTTTAA+AGG 0.141804 2.3:+54033204 MS.gene58635:CDS
CAGTCAAGGCCATCTATATT+TGG 0.179813 2.3:+54033196 MS.gene58635:CDS
GATCCTTCGTTGACTACTTT+TGG 0.192467 2.3:+54033268 MS.gene58635:CDS
TTGGAGGAAGTTAAGGGTTT+AGG 0.192505 2.3:+54033241 MS.gene58635:CDS
TGGAGGAAGTTAAGGGTTTA+GGG 0.236533 2.3:+54033242 MS.gene58635:CDS
AAACTATAACAAAACATATT+TGG 0.239296 2.3:-54033502 None:intergenic
AGACCAACCCCATTTCTTAA+AGG 0.307244 2.3:-54033350 None:intergenic
TTTGTTATAGTTTACATAAA+AGG 0.315414 2.3:+54033512 MS.gene58635:CDS
GCAGAGAATGGTGTCCTTGC+TGG 0.321424 2.3:-54033062 None:intergenic
CTTGAGCAAGTTTGTCTTGA+AGG 0.325723 2.3:+54033636 MS.gene58635:CDS
TCTCTGCTTAATTCGATATT+CGG 0.329319 2.3:+54033078 MS.gene58635:CDS
AAGAAATTGAGAACTGAATC+AGG 0.331080 2.3:-54032701 None:intergenic
AAAGGATTTGATTAAGTCAT+TGG 0.335353 2.3:+54033222 MS.gene58635:CDS
AAACTAATCTGTAAAATTGC+AGG 0.337554 2.3:-54032989 None:intergenic
TCCTACCTCATCGACAAATT+CGG 0.342604 2.3:+54032617 MS.gene58635:CDS
TGTAGGTAACCCTAAGTTCT+TGG 0.343348 2.3:+54032874 MS.gene58635:CDS
AAGCTTAATTCCAAGAACTT+AGG 0.347303 2.3:-54032884 None:intergenic
GTCAGATTCAGAAGCACCTT+TGG 0.364937 2.3:-54032837 None:intergenic
AAGTTGATACCTTTAAGAAA+TGG 0.365182 2.3:+54033341 MS.gene58635:CDS
AGTTGATACCTTTAAGAAAT+GGG 0.365271 2.3:+54033342 MS.gene58635:CDS
ATTGAAGCCAACATCAAATT+AGG 0.374513 2.3:-54033406 None:intergenic
ATATCTTCAGAATAAGTAAA+TGG 0.375368 2.3:-54033610 None:intergenic
TAAGTCATTGGAGGAAGTTA+AGG 0.377755 2.3:+54033234 MS.gene58635:CDS
AATTGATATTAGCCACAATA+AGG 0.389243 2.3:-54033126 None:intergenic
TGTGGCTAATATCAATTTGA+TGG 0.392207 2.3:+54033132 MS.gene58635:CDS
AGCTTAATTCCAAGAACTTA+GGG 0.393617 2.3:-54032883 None:intergenic
ATCAGATGAAGAAGCGCCTT+TGG 0.403170 2.3:-54032942 None:intergenic
TCCTTTAAACCAAATATAGA+TGG 0.404648 2.3:-54033205 None:intergenic
TCAATTAGGTTGGGATTCCT+TGG 0.416390 2.3:+54033465 MS.gene58635:CDS
AATTGCAAAACTGAGGCTCT+TGG 0.425012 2.3:-54033541 None:intergenic
TTGGGTCAATCAATTAGGTT+GGG 0.436055 2.3:+54033456 MS.gene58635:CDS
GACATTGTTCGTATGGTTGT+AGG 0.437321 2.3:+54032857 MS.gene58635:CDS
AAGTCATTGGAGGAAGTTAA+GGG 0.441441 2.3:+54033235 MS.gene58635:CDS
ACATACGCAATATCATCAAA+AGG 0.441484 2.3:+54032750 MS.gene58635:CDS
GAAATCACATATTAAGTGAA+TGG 0.476870 2.3:-54033733 None:intergenic
TTTGGGTCAATCAATTAGGT+TGG 0.477232 2.3:+54033455 MS.gene58635:CDS
GTTGCTTTGGTAGCCAAGAA+AGG 0.482780 2.3:+54033292 MS.gene58635:CDS
TGAATCTGACATTGTTCGTA+TGG 0.483173 2.3:+54032850 MS.gene58635:CDS
ATGAGGTAGGAAACGGTGAA+TGG 0.498531 2.3:-54032605 None:intergenic
AACTAATCTGTAAAATTGCA+GGG 0.522503 2.3:-54032988 None:intergenic
ATATCAGCCTAATTTGATGT+TGG 0.524802 2.3:+54033399 MS.gene58635:CDS
CATACGCAATATCATCAAAA+GGG 0.533856 2.3:+54032751 MS.gene58635:CDS
ATTAGCCACAATAAGGCGAT+AGG 0.536156 2.3:-54033119 None:intergenic
TGAGGTAGGAAACGGTGAAT+GGG 0.540099 2.3:-54032604 None:intergenic
TTGCTAGTTTGCTTCAGTCA+AGG 0.547608 2.3:+54033182 MS.gene58635:CDS
GTTGATACCTTTAAGAAATG+GGG 0.553181 2.3:+54033343 MS.gene58635:CDS
GGATTTGATTAAGTCATTGG+AGG 0.561173 2.3:+54033225 MS.gene58635:CDS
AAATTTGAGAGAAAATAGGA+AGG 0.566350 2.3:-54032555 None:intergenic
ATATCGAATTAAGCAGAGAA+TGG 0.572002 2.3:-54033074 None:intergenic
AAATCCCTATCGCCTTATTG+TGG 0.576235 2.3:+54033114 MS.gene58635:CDS
ATACCTTTAAGAAATGGGGT+TGG 0.587688 2.3:+54033347 MS.gene58635:CDS
GAGCAAGTTTGTCTTGAAGG+AGG 0.590871 2.3:+54033639 MS.gene58635:CDS
TAGGTTCTTTAATTCCAGCA+AGG 0.604223 2.3:+54033048 MS.gene58635:CDS
TGGAAACTTAGCAAGTGCCA+AGG 0.606665 2.3:-54033482 None:intergenic
TTAGCCACAATAAGGCGATA+GGG 0.609256 2.3:-54033118 None:intergenic
ATATCATCAAAAGGGAACCA+TGG 0.612508 2.3:+54032759 MS.gene58635:CDS
TTTGTCGATGAGGTAGGAAA+CGG 0.617530 2.3:-54032612 None:intergenic
CAAAAGAAATTGCAAAACTG+AGG 0.625549 2.3:-54033548 None:intergenic
TCCGAATTTGTCGATGAGGT+AGG 0.639837 2.3:-54032618 None:intergenic
GTATCGCAGGAAAGAATCCA+TGG 0.639912 2.3:-54032776 None:intergenic
AATTTGAGAGAAAATAGGAA+GGG 0.640674 2.3:-54032554 None:intergenic
GTGTGAATGTGAATTTGAAG+TGG 0.648017 2.3:-54032582 None:intergenic
AGAATCCGAATTTGTCGATG+AGG 0.652980 2.3:-54032622 None:intergenic
AATGAAACTTGCATACACAA+AGG 0.663379 2.3:+54033696 MS.gene58635:CDS
CTATCTATTAAAGTTATACG+AGG 0.674399 2.3:+54033669 MS.gene58635:CDS
GATATTGCGTATGTGTGAGT+CGG 0.676436 2.3:-54032741 None:intergenic
ACCCCAAAAGTAGTCAACGA+AGG 0.684823 2.3:-54033271 None:intergenic
GCATACACAAAGGAGAACAA+TGG 0.692068 2.3:+54033706 MS.gene58635:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTATAACAAAACATATT+TGG - chr2.3:54033505-54033524 None:intergenic 15.0%
!! TATTTAACAATTCAAAAAGA+GGG - chr2.3:54033030-54033049 None:intergenic 15.0%
!!! TTTGTTATAGTTTACATAAA+AGG + chr2.3:54033512-54033531 MS.gene58635:CDS 15.0%
!! AAGGATTAAGTAAAAAACTT+TGG + chr2.3:54033311-54033330 MS.gene58635:CDS 20.0%
!! AGAAAAATTTGAGAGAAAAT+AGG - chr2.3:54032562-54032581 None:intergenic 20.0%
!! AGAGTAAAAATTGAAACTTT+GGG - chr2.3:54032817-54032836 None:intergenic 20.0%
!! AGGATTAAGTAAAAAACTTT+GGG + chr2.3:54033312-54033331 MS.gene58635:CDS 20.0%
!! ATATCTTCAGAATAAGTAAA+TGG - chr2.3:54033613-54033632 None:intergenic 20.0%
!! CTATTTAACAATTCAAAAAG+AGG - chr2.3:54033031-54033050 None:intergenic 20.0%
!!! CTCTTTTTGAATTGTTAAAT+AGG + chr2.3:54033029-54033048 MS.gene58635:CDS 20.0%
!!! TTTTTTACTTAATCCTTTCT+TGG - chr2.3:54033308-54033327 None:intergenic 20.0%
! AAACTAATCTGTAAAATTGC+AGG - chr2.3:54032992-54033011 None:intergenic 25.0%
! AAAGGATTTGATTAAGTCAT+TGG + chr2.3:54033222-54033241 MS.gene58635:CDS 25.0%
! AAATTTGAGAGAAAATAGGA+AGG - chr2.3:54032558-54032577 None:intergenic 25.0%
! AACTAATCTGTAAAATTGCA+GGG - chr2.3:54032991-54033010 None:intergenic 25.0%
! AATTGATATTAGCCACAATA+AGG - chr2.3:54033129-54033148 None:intergenic 25.0%
! AATTTGAGAGAAAATAGGAA+GGG - chr2.3:54032557-54032576 None:intergenic 25.0%
! CTATCTATTAAAGTTATACG+AGG + chr2.3:54033669-54033688 MS.gene58635:CDS 25.0%
! CTCAATTTCTTCAAAAATCA+CGG + chr2.3:54032713-54032732 MS.gene58635:CDS 25.0%
! GAGAGTAAAAATTGAAACTT+TGG - chr2.3:54032818-54032837 None:intergenic 25.0%
! TCCTTTAAACCAAATATAGA+TGG - chr2.3:54033208-54033227 None:intergenic 25.0%
!! AGTTGATACCTTTAAGAAAT+GGG + chr2.3:54033342-54033361 MS.gene58635:CDS 25.0%
!! TTGCAATTTCTTTTGATGAA+AGG + chr2.3:54033556-54033575 MS.gene58635:CDS 25.0%
!! TTTCAATTTTTACTCTCCAA+AGG + chr2.3:54032821-54032840 MS.gene58635:CDS 25.0%
!! TTTGAATATTTTCGATCCAA+AGG + chr2.3:54032926-54032945 MS.gene58635:CDS 25.0%
!!! AAGTTGATACCTTTAAGAAA+TGG + chr2.3:54033341-54033360 MS.gene58635:CDS 25.0%
!!! TGCAATTTTACAGATTAGTT+TGG + chr2.3:54032991-54033010 MS.gene58635:CDS 25.0%
AAGAAATTGAGAACTGAATC+AGG - chr2.3:54032704-54032723 None:intergenic 30.0%
AAGCTTAATTCCAAGAACTT+AGG - chr2.3:54032887-54032906 None:intergenic 30.0%
AATGAAACTTGCATACACAA+AGG + chr2.3:54033696-54033715 MS.gene58635:CDS 30.0%
ACATACGCAATATCATCAAA+AGG + chr2.3:54032750-54032769 MS.gene58635:CDS 30.0%
AGCTTAATTCCAAGAACTTA+GGG - chr2.3:54032886-54032905 None:intergenic 30.0%
ATATCAGCCTAATTTGATGT+TGG + chr2.3:54033399-54033418 MS.gene58635:CDS 30.0%
ATATCGAATTAAGCAGAGAA+TGG - chr2.3:54033077-54033096 None:intergenic 30.0%
ATTGAAGCCAACATCAAATT+AGG - chr2.3:54033409-54033428 None:intergenic 30.0%
CAAAAGAAATTGCAAAACTG+AGG - chr2.3:54033551-54033570 None:intergenic 30.0%
CATACGCAATATCATCAAAA+GGG + chr2.3:54032751-54032770 MS.gene58635:CDS 30.0%
TCTCTGCTTAATTCGATATT+CGG + chr2.3:54033078-54033097 MS.gene58635:CDS 30.0%
TGTGGCTAATATCAATTTGA+TGG + chr2.3:54033132-54033151 MS.gene58635:CDS 30.0%
! GCCATCTATATTTGGTTTAA+AGG + chr2.3:54033204-54033223 MS.gene58635:CDS 30.0%
! GTTGATACCTTTAAGAAATG+GGG + chr2.3:54033343-54033362 MS.gene58635:CDS 30.0%
!! ATCAATTTGATGGCTGATTT+TGG + chr2.3:54033142-54033161 MS.gene58635:CDS 30.0%
!!! AGTTTTTGGGTCAATCAATT+AGG + chr2.3:54033451-54033470 MS.gene58635:CDS 30.0%
!!! GGTTTTGAAATAAAGCTCTT+TGG - chr2.3:54032672-54032691 None:intergenic 30.0%
!!! TAGTTTGCTGATGAGTTTTT+GGG + chr2.3:54033438-54033457 MS.gene58635:CDS 30.0%
!!! TTAGTTTGCTGATGAGTTTT+TGG + chr2.3:54033437-54033456 MS.gene58635:CDS 30.0%
AAGTCATTGGAGGAAGTTAA+GGG + chr2.3:54033235-54033254 MS.gene58635:CDS 35.0%
ATATCATCAAAAGGGAACCA+TGG + chr2.3:54032759-54032778 MS.gene58635:CDS 35.0%
GGATTTGATTAAGTCATTGG+AGG + chr2.3:54033225-54033244 MS.gene58635:CDS 35.0%
GTGTGAATGTGAATTTGAAG+TGG - chr2.3:54032585-54032604 None:intergenic 35.0%
TAAGTCATTGGAGGAAGTTA+AGG + chr2.3:54033234-54033253 MS.gene58635:CDS 35.0%
TAGGTTCTTTAATTCCAGCA+AGG + chr2.3:54033048-54033067 MS.gene58635:CDS 35.0%
TGAATCTGACATTGTTCGTA+TGG + chr2.3:54032850-54032869 MS.gene58635:CDS 35.0%
TTGGGTCAATCAATTAGGTT+GGG + chr2.3:54033456-54033475 MS.gene58635:CDS 35.0%
TTTGGGTCAATCAATTAGGT+TGG + chr2.3:54033455-54033474 MS.gene58635:CDS 35.0%
! AACTGAATCAGGTTTTTGTG+AGG - chr2.3:54032693-54032712 None:intergenic 35.0%
! ATACCTTTAAGAAATGGGGT+TGG + chr2.3:54033347-54033366 MS.gene58635:CDS 35.0%
!! ATCCTTCGTTGACTACTTTT+GGG + chr2.3:54033269-54033288 MS.gene58635:CDS 35.0%
AATTGCAAAACTGAGGCTCT+TGG - chr2.3:54033544-54033563 None:intergenic 40.0%
AGAATCCGAATTTGTCGATG+AGG - chr2.3:54032625-54032644 None:intergenic 40.0%
AGACCAACCCCATTTCTTAA+AGG - chr2.3:54033353-54033372 None:intergenic 40.0%
ATTAGCCACAATAAGGCGAT+AGG - chr2.3:54033122-54033141 None:intergenic 40.0%
CAGTCAAGGCCATCTATATT+TGG + chr2.3:54033196-54033215 MS.gene58635:CDS 40.0%
CTTGAGCAAGTTTGTCTTGA+AGG + chr2.3:54033636-54033655 MS.gene58635:CDS 40.0%
GACATTGTTCGTATGGTTGT+AGG + chr2.3:54032857-54032876 MS.gene58635:CDS 40.0%
GATATTGCGTATGTGTGAGT+CGG - chr2.3:54032744-54032763 None:intergenic 40.0%
GCATACACAAAGGAGAACAA+TGG + chr2.3:54033706-54033725 MS.gene58635:CDS 40.0%
TCCTACCTCATCGACAAATT+CGG + chr2.3:54032617-54032636 MS.gene58635:CDS 40.0%
TGGAGGAAGTTAAGGGTTTA+GGG + chr2.3:54033242-54033261 MS.gene58635:CDS 40.0%
TGTAGGTAACCCTAAGTTCT+TGG + chr2.3:54032874-54032893 MS.gene58635:CDS 40.0%
TTAGCCACAATAAGGCGATA+GGG - chr2.3:54033121-54033140 None:intergenic 40.0%
TTGGAGGAAGTTAAGGGTTT+AGG + chr2.3:54033241-54033260 MS.gene58635:CDS 40.0%
TTTGTCGATGAGGTAGGAAA+CGG - chr2.3:54032615-54032634 None:intergenic 40.0%
! AAATCCCTATCGCCTTATTG+TGG + chr2.3:54033114-54033133 MS.gene58635:CDS 40.0%
!! ACTTTGGGAGAATCGTTTTG+TGG - chr2.3:54032802-54032821 None:intergenic 40.0%
!! CTTTGGGAGAATCGTTTTGT+GGG - chr2.3:54032801-54032820 None:intergenic 40.0%
!! GATCCTTCGTTGACTACTTT+TGG + chr2.3:54033268-54033287 MS.gene58635:CDS 40.0%
!! TCAATTAGGTTGGGATTCCT+TGG + chr2.3:54033465-54033484 MS.gene58635:CDS 40.0%
!! TCCTTCGTTGACTACTTTTG+GGG + chr2.3:54033270-54033289 MS.gene58635:CDS 40.0%
!! TTGCTAGTTTGCTTCAGTCA+AGG + chr2.3:54033182-54033201 MS.gene58635:CDS 40.0%
ACCCCAAAAGTAGTCAACGA+AGG - chr2.3:54033274-54033293 None:intergenic 45.0%
ATGAGGTAGGAAACGGTGAA+TGG - chr2.3:54032608-54032627 None:intergenic 45.0%
GAGCAAGTTTGTCTTGAAGG+AGG + chr2.3:54033639-54033658 MS.gene58635:CDS 45.0%
GTATCGCAGGAAAGAATCCA+TGG - chr2.3:54032779-54032798 None:intergenic 45.0%
TCCGAATTTGTCGATGAGGT+AGG - chr2.3:54032621-54032640 None:intergenic 45.0%
TGAGGTAGGAAACGGTGAAT+GGG - chr2.3:54032607-54032626 None:intergenic 45.0%
TGGAAACTTAGCAAGTGCCA+AGG - chr2.3:54033485-54033504 None:intergenic 45.0%
! GTTGCTTTGGTAGCCAAGAA+AGG + chr2.3:54033292-54033311 MS.gene58635:CDS 45.0%
!! AATCGTTTTGTGGGTATCGC+AGG - chr2.3:54032792-54032811 None:intergenic 45.0%
!! ATCAGATGAAGAAGCGCCTT+TGG - chr2.3:54032945-54032964 None:intergenic 45.0%
!! GTCAGATTCAGAAGCACCTT+TGG - chr2.3:54032840-54032859 None:intergenic 45.0%
!!! GACTACTTTTGGGGTTGCTT+TGG + chr2.3:54033279-54033298 MS.gene58635:CDS 45.0%
GCAGAGAATGGTGTCCTTGC+TGG - chr2.3:54033065-54033084 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 54032488 54033744 54032488 ID=MS.gene58635
chr2.3 mRNA 54032488 54033744 54032488 ID=MS.gene58635.t1;Parent=MS.gene58635
chr2.3 exon 54032488 54033744 54032488 ID=MS.gene58635.t1.exon1;Parent=MS.gene58635.t1
chr2.3 CDS 54032488 54033744 54032488 ID=cds.MS.gene58635.t1;Parent=MS.gene58635.t1
Gene Sequence

>MS.gene58635

ATGTTGAAAGCGTTTCTCTGCAACAATAATGCATTTCGCATATCAACAACAACACTCTACAACGCACCCTTCCTATTTTCTCTCAAATTTTTCTCCACTTCAAATTCACATTCACACCCATTCACCGTTTCCTACCTCATCGACAAATTCGGATTCTCACATGAATTTGCACTCAAAGCTTCCAAAGAGCTTTATTTCAAAACCTCACAAAAACCTGATTCAGTTCTCAATTTCTTCAAAAATCACGGTTTCACCGACTCACACATACGCAATATCATCAAAAGGGAACCATGGATTCTTTCCTGCGATACCCACAAAACGATTCTCCCAAAGTTTCAATTTTTACTCTCCAAAGGTGCTTCTGAATCTGACATTGTTCGTATGGTTGTAGGTAACCCTAAGTTCTTGGAATTAAGCTTGAAGAATCATCAAATTAAGTTTGAATATTTTCGATCCAAAGGCGCTTCTTCATCTGATATTGTTTCATTGTTAACTGCAAACCCTGCAATTTTACAGATTAGTTTGGAGAAACGAATAATCCCTCTTTTTGAATTGTTAAATAGGTTCTTTAATTCCAGCAAGGACACCATTCTCTGCTTAATTCGATATTCGGCTGCATTTATTATAAATCCCTATCGCCTTATTGTGGCTAATATCAATTTGATGGCTGATTTTGGAGTTTCTGATAATGTCATTGCTAGTTTGCTTCAGTCAAGGCCATCTATATTTGGTTTAAAGGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCGTTGACTACTTTTGGGGTTGCTTTGGTAGCCAAGAAAGGATTAAGTAAAAAACTTTGGGATGAGAAAGTTGATACCTTTAAGAAATGGGGTTGGTCTGATGAAGATGTAATTCGAGCATTTAGATATCAGCCTAATTTGATGTTGGCTTCAATTGATAAGATTAGTTTGCTGATGAGTTTTTGGGTCAATCAATTAGGTTGGGATTCCTTGGCACTTGCTAAGTTTCCAAATATGTTTTGTTATAGTTTACATAAAAGGATCATTCCAAGAGCCTCAGTTTTGCAATTTCTTTTGATGAAAGGTTTGCGAAAAAAGAATGCAAGCTTAGTCACACCATTTACTTATTCTGAAGATATGTTCTTGAGCAAGTTTGTCTTGAAGGAGGAGTCTAACTATCTATTAAAGTTATACGAGGAAAAAATGAAACTTGCATACACAAAGGAGAACAATGGCATGCCATTCACTTAA
Protein sequence

>MS.gene58635.t1

MLKAFLCNNNAFRISTTTLYNAPFLFSLKFFSTSNSHSHPFTVSYLIDKFGFSHEFALKASKELYFKTSQKPDSVLNFFKNHGFTDSHIRNIIKREPWILSCDTHKTILPKFQFLLSKGASESDIVRMVVGNPKFLELSLKNHQIKFEYFRSKGASSSDIVSLLTANPAILQISLEKRIIPLFELLNRFFNSSKDTILCLIRYSAAFIINPYRLIVANINLMADFGVSDNVIASLLQSRPSIFGLKDLIKSLEEVKGLGFDPSLTTFGVALVAKKGLSKKLWDEKVDTFKKWGWSDEDVIRAFRYQPNLMLASIDKISLLMSFWVNQLGWDSLALAKFPNMFCYSLHKRIIPRASVLQFLLMKGLRKKNASLVTPFTYSEDMFLSKFVLKEESNYLLKLYEEKMKLAYTKENNGMPFT