Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58764.t1 | XP_013466739.1 | 40.8 | 370 | 153 | 8 | 1 | 367 | 1 | 307 | 2.20E-49 | 206.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58764.t1 | A0A072VRN1 | 40.8 | 370 | 153 | 8 | 1 | 367 | 1 | 307 | 1.6e-49 | 206.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene58764.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58764.t1 | MTR_2g045670 | 41.033 | 368 | 110 | 8 | 1 | 367 | 20 | 281 | 1.45e-70 | 222 |
| MS.gene58764.t1 | MTR_2g045700 | 41.734 | 369 | 115 | 8 | 1 | 367 | 1 | 271 | 3.10e-67 | 213 |
| MS.gene58764.t1 | MTR_1g034500 | 49.801 | 251 | 77 | 7 | 1 | 223 | 1 | 230 | 4.49e-66 | 211 |
| MS.gene58764.t1 | MTR_2g045630 | 45.956 | 272 | 110 | 7 | 96 | 366 | 42 | 277 | 7.34e-56 | 184 |
| MS.gene58764.t1 | MTR_8g077950 | 39.773 | 88 | 51 | 1 | 276 | 361 | 252 | 339 | 1.34e-13 | 71.6 |
| MS.gene58764.t1 | MTR_8g077950 | 39.773 | 88 | 51 | 1 | 276 | 361 | 250 | 337 | 1.38e-13 | 71.2 |
| MS.gene58764.t1 | MTR_8g077950 | 39.773 | 88 | 51 | 1 | 276 | 361 | 192 | 279 | 4.11e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58764.t1 | AT4G36730 | 36.250 | 80 | 51 | 0 | 282 | 361 | 220 | 299 | 2.28e-11 | 64.7 |
| MS.gene58764.t1 | AT4G36730 | 36.250 | 80 | 51 | 0 | 282 | 361 | 222 | 301 | 2.38e-11 | 64.7 |
Find 68 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTACAGGTTGTGAGTTTC+TGG | 0.129427 | 8.1:-10378409 | None:intergenic |
| CTCAGCTAGTAGAGATTTAT+TGG | 0.150152 | 8.1:-10378055 | None:intergenic |
| TCCCCAGTTATTAATCTTAC+AGG | 0.249858 | 8.1:-10378423 | None:intergenic |
| GTAAATAATTGGTTGGAATC+TGG | 0.251335 | 8.1:-10378387 | None:intergenic |
| GAGAACAAGGATTTATCTTT+TGG | 0.256634 | 8.1:+10379665 | MS.gene58764:CDS |
| GTGAGTTTCTGGTAAATAAT+TGG | 0.270018 | 8.1:-10378398 | None:intergenic |
| CAAAGAAATTGTTGTAATAC+TGG | 0.291279 | 8.1:-10378521 | None:intergenic |
| ACTGGGGAATCAAGTGAATA+TGG | 0.297191 | 8.1:+10378438 | MS.gene58764:CDS |
| GAGAACAAGGTTAAGGAAAA+AGG | 0.303213 | 8.1:+10381233 | MS.gene58764:CDS |
| TGCAGGTGGATGATTATAAT+AGG | 0.311712 | 8.1:-10377775 | None:intergenic |
| CAACCTGTAAGATTAATAAC+TGG | 0.342383 | 8.1:+10378420 | MS.gene58764:CDS |
| TGATGCTCAACTAAAATATA+TGG | 0.343775 | 8.1:+10379948 | MS.gene58764:CDS |
| TGCAATTGCTTTCTCAGAAA+TGG | 0.357172 | 8.1:+10378338 | MS.gene58764:CDS |
| GGATGATTATAATAGGGATT+TGG | 0.374399 | 8.1:-10377768 | None:intergenic |
| CTTGGCTGATTCAGAGTTTG+AGG | 0.379924 | 8.1:+10379890 | MS.gene58764:CDS |
| TGTGGCAGCATAGGATTGTT+TGG | 0.381160 | 8.1:-10377409 | None:intergenic |
| ATCTGTGCTGAGTCAAACTT+TGG | 0.386345 | 8.1:+10378554 | MS.gene58764:CDS |
| TAAATAATTGGTTGGAATCT+GGG | 0.388774 | 8.1:-10378386 | None:intergenic |
| TGACGCTCGACTAAATAATA+TGG | 0.389843 | 8.1:+10378602 | MS.gene58764:CDS |
| AAGTTATTCTGAGGCATGTC+TGG | 0.390063 | 8.1:+10382242 | MS.gene58764:CDS |
| GAAGAGCTAATTAAGGAGTA+TGG | 0.396074 | 8.1:+10382718 | MS.gene58764:CDS |
| CAATCCTATGCTGCCACATT+GGG | 0.402800 | 8.1:+10377414 | MS.gene58764:CDS |
| AGAGATCTAAGATGAATGTT+GGG | 0.413041 | 8.1:+10379636 | MS.gene58764:CDS |
| TCAGTACATGTGGCAAAATC+AGG | 0.421341 | 8.1:+10377878 | MS.gene58764:CDS |
| GATTTATTGGAGAGCTTCAC+AGG | 0.424141 | 8.1:-10378042 | None:intergenic |
| GATCTCTGCTTCTTACATAT+AGG | 0.425971 | 8.1:-10379620 | None:intergenic |
| ACATTGGGCTTCACCTATGC+AGG | 0.438630 | 8.1:+10377429 | MS.gene58764:CDS |
| CAGAGATCTAAGATGAATGT+TGG | 0.451770 | 8.1:+10379635 | MS.gene58764:CDS |
| GGAACAGGAAGAGCTAATTA+AGG | 0.452723 | 8.1:+10382711 | MS.gene58764:intron |
| CAGCTAAGAGAACAAGGTTA+AGG | 0.453072 | 8.1:+10381226 | MS.gene58764:CDS |
| AAAGAAGAATCCGATCCATC+TGG | 0.459016 | 8.1:+10377249 | MS.gene58764:CDS |
| TCTGTGCTGAGTCAAACTTT+GGG | 0.467374 | 8.1:+10378555 | MS.gene58764:CDS |
| GCAGGTGGATGATTATAATA+GGG | 0.469270 | 8.1:-10377774 | None:intergenic |
| AAAGTTTGACTCAGCACAGA+TGG | 0.498013 | 8.1:-10378552 | None:intergenic |
| GTTTCTGGTAAATAATTGGT+TGG | 0.499066 | 8.1:-10378394 | None:intergenic |
| TTGAATCATCAGTATGCAGC+TGG | 0.509107 | 8.1:+10377840 | MS.gene58764:CDS |
| CTGAGTCAAACTTTGGGGAC+AGG | 0.511343 | 8.1:+10378561 | MS.gene58764:CDS |
| CTTTCTCAGAAATGGTAAGC+AGG | 0.515920 | 8.1:+10378346 | MS.gene58764:CDS |
| TGAGGTACCACAAAATAGTA+AGG | 0.518570 | 8.1:-10377276 | None:intergenic |
| ACAATCCTATGCTGCCACAT+TGG | 0.521704 | 8.1:+10377413 | MS.gene58764:CDS |
| AAACTCTGAATCAGCCAAGA+TGG | 0.521783 | 8.1:-10379886 | None:intergenic |
| TATAATCATCCACCTGCAGC+TGG | 0.532701 | 8.1:+10377780 | MS.gene58764:CDS |
| GAAGCCCAATGTGGCAGCAT+AGG | 0.538692 | 8.1:-10377418 | None:intergenic |
| CAGTTACAATGTCAAGCAGC+AGG | 0.542255 | 8.1:-10382775 | None:intergenic |
| AACCTGTAAGATTAATAACT+GGG | 0.551341 | 8.1:+10378421 | MS.gene58764:CDS |
| AAATAGTAAGGTCTTCCAGA+TGG | 0.566947 | 8.1:-10377264 | None:intergenic |
| AACTTTGGGGACAGGCGTCA+AGG | 0.567206 | 8.1:+10378569 | MS.gene58764:CDS |
| GTTAAAATGATGAACCTCGA+TGG | 0.568844 | 8.1:-10382286 | None:intergenic |
| CTCATGTAAGAACCAGCTGC+AGG | 0.577655 | 8.1:-10377792 | None:intergenic |
| TGTTGGGGATGGTGAGAACA+AGG | 0.580631 | 8.1:+10379652 | MS.gene58764:CDS |
| ATAGGGATTTGGAGTAAACT+CGG | 0.582242 | 8.1:-10377757 | None:intergenic |
| GTAAGGTCTTCCAGATGGAT+CGG | 0.588408 | 8.1:-10377259 | None:intergenic |
| CTGTGCTGAGTCAAACTTTG+GGG | 0.590960 | 8.1:+10378556 | MS.gene58764:CDS |
| GAAATCTAAGATGACTGTTG+AGG | 0.593683 | 8.1:+10379700 | MS.gene58764:CDS |
| TAGGGATTTGGAGTAAACTC+GGG | 0.602326 | 8.1:-10377756 | None:intergenic |
| CATGATTCACTGACATCTTG+AGG | 0.602539 | 8.1:-10377294 | None:intergenic |
| CAATAAATCTCTACTAGCTG+AGG | 0.606627 | 8.1:+10378056 | MS.gene58764:CDS |
| GGGAATCAGCTAAGAGAACA+AGG | 0.611347 | 8.1:+10381220 | MS.gene58764:CDS |
| GAGTTTGAGGACAGTCGTCA+AGG | 0.611746 | 8.1:+10379903 | MS.gene58764:CDS |
| AGATGCTGATCGAGTTGTGT+TGG | 0.613493 | 8.1:+10378494 | MS.gene58764:CDS |
| TCTAAGATGAATGTTGGGGA+TGG | 0.626712 | 8.1:+10379641 | MS.gene58764:CDS |
| ACTTGAATCATCAGTACATG+TGG | 0.630018 | 8.1:+10377868 | MS.gene58764:CDS |
| ATGTAAGAACCAGCTGCAGG+TGG | 0.634873 | 8.1:-10377789 | None:intergenic |
| GAGATCTAAGATGAATGTTG+GGG | 0.640487 | 8.1:+10379637 | MS.gene58764:CDS |
| TCTAAGATGACTGTTGAGGA+TGG | 0.650064 | 8.1:+10379704 | MS.gene58764:CDS |
| ACCTGTAAGATTAATAACTG+GGG | 0.682506 | 8.1:+10378422 | MS.gene58764:CDS |
| TGCATAGGTGAAGCCCAATG+TGG | 0.721959 | 8.1:-10377427 | None:intergenic |
| TGATGAAAACGATTCCATCG+AGG | 0.749293 | 8.1:+10382272 | MS.gene58764:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATTCATTGAAATATTT+AGG | - | chr8.1:10378086-10378105 | None:intergenic | 10.0% |
| !! | ATTTAAAGAAAATTAGAATA+AGG | - | chr8.1:10381459-10381478 | None:intergenic | 10.0% |
| !! | GATATAAAATTGAAAAAATA+AGG | - | chr8.1:10382315-10382334 | None:intergenic | 10.0% |
| !! | TAAAAGATGATATTAAAAAA+TGG | - | chr8.1:10381409-10381428 | None:intergenic | 10.0% |
| !! | TATAAAATTGAAAAAATAAG+GGG | - | chr8.1:10382313-10382332 | None:intergenic | 10.0% |
| !! | TATTATAACTAACAAAATTA+TGG | - | chr8.1:10380876-10380895 | None:intergenic | 10.0% |
| !!! | ACTCATTTTAAATTTTAATT+AGG | + | chr8.1:10377722-10377741 | MS.gene58764:intron | 10.0% |
| !!! | ACTTGAAAAAAAAAAAATTT+TGG | - | chr8.1:10381436-10381455 | None:intergenic | 10.0% |
| !!! | CTTGAAAAAAAAAAAATTTT+GGG | - | chr8.1:10381435-10381454 | None:intergenic | 10.0% |
| !!! | TTGAAAAAAAAAAAATTTTG+GGG | - | chr8.1:10381434-10381453 | None:intergenic | 10.0% |
| !! | AATGAAATAAACTAAAAACT+AGG | + | chr8.1:10382437-10382456 | MS.gene58764:intron | 15.0% |
| !!! | TTAGATATTCTTAATTTTGT+TGG | + | chr8.1:10380809-10380828 | MS.gene58764:intron | 15.0% |
| !!! | TTTTCTAATCATAATTTCTA+TGG | + | chr8.1:10378129-10378148 | MS.gene58764:intron | 15.0% |
| !! | AAAAAGAAATGAAAACAGTT+AGG | + | chr8.1:10382478-10382497 | MS.gene58764:intron | 20.0% |
| !! | AAAATTATGGCTAGAATTAT+AGG | - | chr8.1:10380863-10380882 | None:intergenic | 20.0% |
| !! | AAATTATGGCTAGAATTATA+GGG | - | chr8.1:10380862-10380881 | None:intergenic | 20.0% |
| !! | AAGATTAATTCTTAACTATC+TGG | + | chr8.1:10381110-10381129 | MS.gene58764:intron | 20.0% |
| !! | AGGAAATTTCATATTTCTTT+AGG | + | chr8.1:10378182-10378201 | MS.gene58764:intron | 20.0% |
| !! | AGTGTAAAATGACATAATTT+GGG | + | chr8.1:10378839-10378858 | MS.gene58764:intron | 20.0% |
| !! | ATAGAAAAATAAACAGCAAA+TGG | + | chr8.1:10378781-10378800 | MS.gene58764:intron | 20.0% |
| !! | ATCAATTTATTCTTCATTAC+AGG | + | chr8.1:10379537-10379556 | MS.gene58764:intron | 20.0% |
| !! | ATTCATTGTTAAAATGTAGT+AGG | + | chr8.1:10379116-10379135 | MS.gene58764:intron | 20.0% |
| !! | GATTATGATTATACATGTTA+GGG | + | chr8.1:10381863-10381882 | MS.gene58764:intron | 20.0% |
| !! | GCTAAAATGACATATAATTT+GGG | + | chr8.1:10378875-10378894 | MS.gene58764:intron | 20.0% |
| !! | TAATAAGTGCTTAAAATGTT+TGG | - | chr8.1:10380511-10380530 | None:intergenic | 20.0% |
| !! | TAGTGTAAAATGACATAATT+TGG | + | chr8.1:10378838-10378857 | MS.gene58764:intron | 20.0% |
| !! | TATAGTTAGTATACATTTAG+AGG | + | chr8.1:10378162-10378181 | MS.gene58764:intron | 20.0% |
| !! | TATGATTGTTGTATATTCAT+CGG | + | chr8.1:10381949-10381968 | MS.gene58764:intron | 20.0% |
| !! | TCAAAAATGTCTTTCATTAA+TGG | + | chr8.1:10378724-10378743 | MS.gene58764:intron | 20.0% |
| !! | TCTTAGATATTGGAATTAAT+GGG | + | chr8.1:10379399-10379418 | MS.gene58764:intron | 20.0% |
| !! | TGATTATGATTATACATGTT+AGG | + | chr8.1:10381862-10381881 | MS.gene58764:intron | 20.0% |
| !! | TGCTAAAATGACATATAATT+TGG | + | chr8.1:10378874-10378893 | MS.gene58764:intron | 20.0% |
| !!! | AAACATTTTAAGCACTTATT+AGG | + | chr8.1:10380510-10380529 | MS.gene58764:intron | 20.0% |
| !!! | AACTTTTTAGTTGTTTTGTT+AGG | - | chr8.1:10382227-10382246 | None:intergenic | 20.0% |
| !!! | ATACCAATATTTATGCATTT+TGG | + | chr8.1:10378306-10378325 | MS.gene58764:intron | 20.0% |
| !!! | GTATCTAAGATATATAAAGT+AGG | - | chr8.1:10380229-10380248 | None:intergenic | 20.0% |
| !!! | GTTTGAAAAGGTTTTATTTA+TGG | + | chr8.1:10380002-10380021 | MS.gene58764:intron | 20.0% |
| !!! | TATATTGAGCTTTAAATTGT+TGG | + | chr8.1:10380767-10380786 | MS.gene58764:intron | 20.0% |
| !!! | TTTTCACATTCTTTGTTTTT+CGG | + | chr8.1:10377975-10377994 | MS.gene58764:intron | 20.0% |
| ! | AAAACTGTAAAAAAAAGTCG+TGG | + | chr8.1:10381375-10381394 | MS.gene58764:intron | 25.0% |
| ! | AAACTGTAAAAAAAAGTCGT+GGG | + | chr8.1:10381376-10381395 | MS.gene58764:intron | 25.0% |
| ! | AAAGAAAAAGACAATCAAAC+AGG | + | chr8.1:10381199-10381218 | MS.gene58764:CDS | 25.0% |
| ! | AAAGATACTAATTGGCAATT+TGG | - | chr8.1:10381986-10382005 | None:intergenic | 25.0% |
| ! | AAAGTTCAAGAAAACGATAA+AGG | - | chr8.1:10382110-10382129 | None:intergenic | 25.0% |
| ! | AACCTGTAAGATTAATAACT+GGG | + | chr8.1:10378421-10378440 | MS.gene58764:CDS | 25.0% |
| ! | AAGAAAAAGACAATCAAACA+GGG | + | chr8.1:10381200-10381219 | MS.gene58764:CDS | 25.0% |
| ! | AAGAAATGGGTAGTTTATTA+AGG | + | chr8.1:10379503-10379522 | MS.gene58764:intron | 25.0% |
| ! | AATATCTATGATTTCGACAA+TGG | + | chr8.1:10381340-10381359 | MS.gene58764:intron | 25.0% |
| ! | ACAACTAAAAAGTTATTCTG+AGG | + | chr8.1:10382233-10382252 | MS.gene58764:CDS | 25.0% |
| ! | ACAATCATGTTCCAAATAAA+GGG | - | chr8.1:10381837-10381856 | None:intergenic | 25.0% |
| ! | ATATCTAACAAGATTTGAGA+TGG | - | chr8.1:10380797-10380816 | None:intergenic | 25.0% |
| ! | ATGAAAGGCTTATAAATGAT+AGG | - | chr8.1:10380998-10381017 | None:intergenic | 25.0% |
| ! | ATGAGACAATGTATCTTTAA+GGG | - | chr8.1:10380262-10380281 | None:intergenic | 25.0% |
| ! | ATTCACTGTTGAAATATAGT+AGG | + | chr8.1:10380164-10380183 | MS.gene58764:intron | 25.0% |
| ! | ATTTCATATTTCTTTAGGTG+CGG | + | chr8.1:10378187-10378206 | MS.gene58764:intron | 25.0% |
| ! | CAAAGAAATTGTTGTAATAC+TGG | - | chr8.1:10378524-10378543 | None:intergenic | 25.0% |
| ! | CTCTTAGATATTGGAATTAA+TGG | + | chr8.1:10379398-10379417 | MS.gene58764:intron | 25.0% |
| ! | GAAGTGTAATTAATGTTGTA+TGG | + | chr8.1:10378677-10378696 | MS.gene58764:intron | 25.0% |
| ! | GATACATATTTAAATCCCTT+AGG | + | chr8.1:10379196-10379215 | MS.gene58764:intron | 25.0% |
| ! | GGTAATGATGTACATATTTA+TGG | + | chr8.1:10377899-10377918 | MS.gene58764:intron | 25.0% |
| ! | GTTTCCTTATTATGAACTTA+TGG | + | chr8.1:10381792-10381811 | MS.gene58764:intron | 25.0% |
| ! | TAAAATTTGAATGCTCAGAA+AGG | + | chr8.1:10379784-10379803 | MS.gene58764:intron | 25.0% |
| ! | TAAATAATTGGTTGGAATCT+GGG | - | chr8.1:10378389-10378408 | None:intergenic | 25.0% |
| ! | TACAATCATGTTCCAAATAA+AGG | - | chr8.1:10381838-10381857 | None:intergenic | 25.0% |
| ! | TAGAATGTTGGATTGTAAAA+TGG | - | chr8.1:10381035-10381054 | None:intergenic | 25.0% |
| ! | TATGAGACAATGTATCTTTA+AGG | - | chr8.1:10380263-10380282 | None:intergenic | 25.0% |
| ! | TATGTATCGAAGATACATAA+AGG | - | chr8.1:10379184-10379203 | None:intergenic | 25.0% |
| ! | TCAAAAAAGTAAGTTTGCAT+GGG | - | chr8.1:10380070-10380089 | None:intergenic | 25.0% |
| ! | TGACCAAAATGCATAAATAT+TGG | - | chr8.1:10378312-10378331 | None:intergenic | 25.0% |
| ! | TGATGCTCAACTAAAATATA+TGG | + | chr8.1:10379948-10379967 | MS.gene58764:CDS | 25.0% |
| ! | TGGTAATCAAAGATACTAAT+TGG | - | chr8.1:10381994-10382013 | None:intergenic | 25.0% |
| ! | TTCAAAAAAGTAAGTTTGCA+TGG | - | chr8.1:10380071-10380090 | None:intergenic | 25.0% |
| !! | AATATATATAGTGTGTCGAT+GGG | - | chr8.1:10380753-10380772 | None:intergenic | 25.0% |
| !! | AATTTTCGTGAAATTGTCAA+AGG | - | chr8.1:10378655-10378674 | None:intergenic | 25.0% |
| !! | AGTTATAATATGTTTTCGTG+TGG | + | chr8.1:10380886-10380905 | MS.gene58764:intron | 25.0% |
| !! | ATGTCATCTTTTCTTTCTTT+AGG | - | chr8.1:10379149-10379168 | None:intergenic | 25.0% |
| !! | ATTCAACTAAAGTACTTGTT+TGG | + | chr8.1:10382339-10382358 | MS.gene58764:intron | 25.0% |
| !! | ATTTTCGTGAAATTGTCAAA+GGG | - | chr8.1:10378654-10378673 | None:intergenic | 25.0% |
| !! | CAATATTTTCTGCAATTATG+AGG | - | chr8.1:10381319-10381338 | None:intergenic | 25.0% |
| !! | GGAGTACTATTAAATGTTAT+GGG | + | chr8.1:10378903-10378922 | MS.gene58764:intron | 25.0% |
| !! | TTATTCAAAGCTTTTGATGT+TGG | + | chr8.1:10382598-10382617 | MS.gene58764:intron | 25.0% |
| !! | TTTATTTGGAACATGATTGT+AGG | + | chr8.1:10381837-10381856 | MS.gene58764:intron | 25.0% |
| !! | TTTTCATAGCATGTTTGAAA+AGG | + | chr8.1:10379990-10380009 | MS.gene58764:intron | 25.0% |
| !! | TTTTCTACGGCAATTATAAA+TGG | - | chr8.1:10379241-10379260 | None:intergenic | 25.0% |
| !! | TTTTTGTAGCATGTTTGAAA+AGG | + | chr8.1:10378926-10378945 | MS.gene58764:intron | 25.0% |
| !!! | AAAATGTTTTAAACCTGCAT+AGG | - | chr8.1:10377445-10377464 | None:intergenic | 25.0% |
| !!! | AACCCTTGTAATTTTTTCTA+CGG | - | chr8.1:10379254-10379273 | None:intergenic | 25.0% |
| !!! | AAGAAACAATGTTTTTAGCT+TGG | + | chr8.1:10381642-10381661 | MS.gene58764:intron | 25.0% |
| !!! | AATATTTATGCATTTTGGTC+AGG | + | chr8.1:10378311-10378330 | MS.gene58764:intron | 25.0% |
| !!! | GTTTGAAAAGGTTTTATTTG+TGG | + | chr8.1:10378938-10378957 | MS.gene58764:intron | 25.0% |
| AAAATTTGCAACTACCACAT+TGG | - | chr8.1:10382014-10382033 | None:intergenic | 30.0% | |
| AAAGAATGTGAAAATGAAGC+AGG | - | chr8.1:10377969-10377988 | None:intergenic | 30.0% | |
| AACTCAACCTCATAAGAAAT+GGG | + | chr8.1:10379490-10379509 | MS.gene58764:intron | 30.0% | |
| AAGAGATGTAAACAAAGTCA+AGG | - | chr8.1:10382050-10382069 | None:intergenic | 30.0% | |
| AAGGTTTATATGTTTCCATG+AGG | - | chr8.1:10382091-10382110 | None:intergenic | 30.0% | |
| ACCTGTAAGATTAATAACTG+GGG | + | chr8.1:10378422-10378441 | MS.gene58764:CDS | 30.0% | |
| AGCACCATAAGTTCATAATA+AGG | - | chr8.1:10381799-10381818 | None:intergenic | 30.0% | |
| AGTATCTTTGATTACCAATG+TGG | + | chr8.1:10381997-10382016 | MS.gene58764:intron | 30.0% | |
| ATGAAAACAGTTAGGATGTT+AGG | + | chr8.1:10382486-10382505 | MS.gene58764:intron | 30.0% | |
| ATGAACTGCAATACAAGTTT+CGG | - | chr8.1:10379819-10379838 | None:intergenic | 30.0% | |
| ATGGTACTGTAGAATGTTAT+GGG | + | chr8.1:10379967-10379986 | MS.gene58764:intron | 30.0% | |
| CAACAAACTTTCCCTTTATT+TGG | + | chr8.1:10381823-10381842 | MS.gene58764:intron | 30.0% | |
| CAACCTGTAAGATTAATAAC+TGG | + | chr8.1:10378420-10378439 | MS.gene58764:CDS | 30.0% | |
| CAATATATATAGTGTGTCGA+TGG | - | chr8.1:10380754-10380773 | None:intergenic | 30.0% | |
| CATATCTTAGTTTCCTTCAT+TGG | + | chr8.1:10381708-10381727 | MS.gene58764:intron | 30.0% | |
| CGGTAATAATTTGAGAATGT+TGG | + | chr8.1:10380648-10380667 | MS.gene58764:intron | 30.0% | |
| GAAAAGAAATGCAGCTAAAT+AGG | - | chr8.1:10381153-10381172 | None:intergenic | 30.0% | |
| GAATTAATCTTAGCAACCTT+AGG | - | chr8.1:10381101-10381120 | None:intergenic | 30.0% | |
| GGATGATTATAATAGGGATT+TGG | - | chr8.1:10377771-10377790 | None:intergenic | 30.0% | |
| GTAAATAATTGGTTGGAATC+TGG | - | chr8.1:10378390-10378409 | None:intergenic | 30.0% | |
| GTCAAAGGGACATATAATTT+GGG | - | chr8.1:10378640-10378659 | None:intergenic | 30.0% | |
| GTGATAGCATTTCATATGAA+AGG | - | chr8.1:10381013-10381032 | None:intergenic | 30.0% | |
| TAAACTACCCATTTCTTATG+AGG | - | chr8.1:10379500-10379519 | None:intergenic | 30.0% | |
| TAACTCAACCTCATAAGAAA+TGG | + | chr8.1:10379489-10379508 | MS.gene58764:intron | 30.0% | |
| TATGGTACTGTAGAATGTTA+TGG | + | chr8.1:10379966-10379985 | MS.gene58764:intron | 30.0% | |
| TCAAGTTATGTTCTAACACA+AGG | - | chr8.1:10380588-10380607 | None:intergenic | 30.0% | |
| TCACAAAGCAATCATATGTA+TGG | - | chr8.1:10377597-10377616 | None:intergenic | 30.0% | |
| TCTTTGTAGAAAAACCATCT+TGG | + | chr8.1:10379872-10379891 | MS.gene58764:intron | 30.0% | |
| TGCCGTAGAAAAAATTACAA+GGG | + | chr8.1:10379249-10379268 | MS.gene58764:intron | 30.0% | |
| TGCTTTGTATCAATTTGTGA+TGG | + | chr8.1:10377466-10377485 | MS.gene58764:intron | 30.0% | |
| TGTCAAAGGGACATATAATT+TGG | - | chr8.1:10378641-10378660 | None:intergenic | 30.0% | |
| TTCAAATACCAATCTCACAT+TGG | - | chr8.1:10382539-10382558 | None:intergenic | 30.0% | |
| TTCTCAAATTATTACCGAGT+CGG | - | chr8.1:10380645-10380664 | None:intergenic | 30.0% | |
| TTGCCGTAGAAAAAATTACA+AGG | + | chr8.1:10379248-10379267 | MS.gene58764:intron | 30.0% | |
| TTTCATATTTCTTTAGGTGC+GGG | + | chr8.1:10378188-10378207 | MS.gene58764:intron | 30.0% | |
| ! | ACAAGGATTTATCTTTTGGT+TGG | + | chr8.1:10379669-10379688 | MS.gene58764:CDS | 30.0% |
| ! | AGAGATCTAAGATGAATGTT+GGG | + | chr8.1:10379636-10379655 | MS.gene58764:CDS | 30.0% |
| ! | ATATATATAGTGTGTCGATG+GGG | - | chr8.1:10380752-10380771 | None:intergenic | 30.0% |
| ! | ATGATTGCTTTGTGATTTGT+TGG | + | chr8.1:10377602-10377621 | MS.gene58764:intron | 30.0% |
| ! | GAGAACAAGGATTTATCTTT+TGG | + | chr8.1:10379665-10379684 | MS.gene58764:CDS | 30.0% |
| ! | GAGAGTAAGGATTTATCTTT+TGG | + | chr8.1:10379728-10379747 | MS.gene58764:intron | 30.0% |
| ! | GGTCTTATGCTTAAAATCTT+TGG | + | chr8.1:10379558-10379577 | MS.gene58764:intron | 30.0% |
| ! | GTCTAATTTTATCCTTTCTG+TGG | + | chr8.1:10379588-10379607 | MS.gene58764:intron | 30.0% |
| ! | TAATTCTGAGTGTTGTATTG+TGG | + | chr8.1:10382634-10382653 | MS.gene58764:intron | 30.0% |
| !! | GGGAGTACTATTAAATGTTA+TGG | + | chr8.1:10378902-10378921 | MS.gene58764:intron | 30.0% |
| !! | GTGAGTTTCTGGTAAATAAT+TGG | - | chr8.1:10378401-10378420 | None:intergenic | 30.0% |
| !! | GTTTCTGGTAAATAATTGGT+TGG | - | chr8.1:10378397-10378416 | None:intergenic | 30.0% |
| AAAACAGTTAGGATGTTAGG+TGG | + | chr8.1:10382489-10382508 | MS.gene58764:intron | 35.0% | |
| AAATAGTAAGGTCTTCCAGA+TGG | - | chr8.1:10377267-10377286 | None:intergenic | 35.0% | |
| AATCTCACATTGGTAAGCAA+TGG | - | chr8.1:10382529-10382548 | None:intergenic | 35.0% | |
| AATCTTAGCAACCTTAGGAA+GGG | - | chr8.1:10381096-10381115 | None:intergenic | 35.0% | |
| AATTATAGGGTCTAGGTAGA+TGG | - | chr8.1:10380849-10380868 | None:intergenic | 35.0% | |
| ACTCAAATTAGCAGCAAACT+TGG | - | chr8.1:10382678-10382697 | None:intergenic | 35.0% | |
| ACTTGAATCATCAGTACATG+TGG | + | chr8.1:10377868-10377887 | MS.gene58764:CDS | 35.0% | |
| AGAAAGTAAATCCCTTCCTA+AGG | + | chr8.1:10381082-10381101 | MS.gene58764:intron | 35.0% | |
| AGTTTGTCATAGTTTCCTCA+TGG | + | chr8.1:10382073-10382092 | MS.gene58764:intron | 35.0% | |
| ATCTCACATTGGTAAGCAAT+GGG | - | chr8.1:10382528-10382547 | None:intergenic | 35.0% | |
| ATGAAACTGATCACCAATGA+AGG | - | chr8.1:10381724-10381743 | None:intergenic | 35.0% | |
| ATGTAGAGACAATGTACCTA+AGG | - | chr8.1:10379215-10379234 | None:intergenic | 35.0% | |
| ATTGCTTACCAATGTGAGAT+TGG | + | chr8.1:10382528-10382547 | MS.gene58764:intron | 35.0% | |
| CAATAAATCTCTACTAGCTG+AGG | + | chr8.1:10378056-10378075 | MS.gene58764:CDS | 35.0% | |
| CACTTTAGACGGATAAAGAT+AGG | + | chr8.1:10381580-10381599 | MS.gene58764:intron | 35.0% | |
| CTAGGTAGATGGTGAAATTA+TGG | - | chr8.1:10380838-10380857 | None:intergenic | 35.0% | |
| CTCAGCTAGTAGAGATTTAT+TGG | - | chr8.1:10378058-10378077 | None:intergenic | 35.0% | |
| CTGCTAATTTGAGTGTGATT+GGG | + | chr8.1:10382684-10382703 | MS.gene58764:intron | 35.0% | |
| GAAGAGCTAATTAAGGAGTA+TGG | + | chr8.1:10382718-10382737 | MS.gene58764:CDS | 35.0% | |
| GACATATCTAGCTAGAATGT+TGG | - | chr8.1:10381047-10381066 | None:intergenic | 35.0% | |
| GAGAACAAGGTTAAGGAAAA+AGG | + | chr8.1:10381233-10381252 | MS.gene58764:CDS | 35.0% | |
| GATCTCTGCTTCTTACATAT+AGG | - | chr8.1:10379623-10379642 | None:intergenic | 35.0% | |
| GATGTCAGTGAATCATGTTA+TGG | + | chr8.1:10377300-10377319 | MS.gene58764:intron | 35.0% | |
| GCAGGTGGATGATTATAATA+GGG | - | chr8.1:10377777-10377796 | None:intergenic | 35.0% | |
| GCATAGGTTCTCTTAGATAT+TGG | + | chr8.1:10379389-10379408 | MS.gene58764:intron | 35.0% | |
| GTATCGAAGATACATAAAGG+AGG | - | chr8.1:10379181-10379200 | None:intergenic | 35.0% | |
| GTTAAAATGATGAACCTCGA+TGG | - | chr8.1:10382289-10382308 | None:intergenic | 35.0% | |
| TAATCTTAGCAACCTTAGGA+AGG | - | chr8.1:10381097-10381116 | None:intergenic | 35.0% | |
| TAGGTACATTGTCTCTACAT+AGG | + | chr8.1:10379215-10379234 | MS.gene58764:intron | 35.0% | |
| TCAGCACCAAAAATTGATGT+TGG | + | chr8.1:10378471-10378490 | MS.gene58764:CDS | 35.0% | |
| TCCCCAGTTATTAATCTTAC+AGG | - | chr8.1:10378426-10378445 | None:intergenic | 35.0% | |
| TGACGCTCGACTAAATAATA+TGG | + | chr8.1:10378602-10378621 | MS.gene58764:CDS | 35.0% | |
| TGCAATTGCTTTCTCAGAAA+TGG | + | chr8.1:10378338-10378357 | MS.gene58764:CDS | 35.0% | |
| TGCAGGTGGATGATTATAAT+AGG | - | chr8.1:10377778-10377797 | None:intergenic | 35.0% | |
| TGTAGAGACAATGTACCTAA+GGG | - | chr8.1:10379214-10379233 | None:intergenic | 35.0% | |
| TGTCTTCTGATCAACTTATC+TGG | - | chr8.1:10381685-10381704 | None:intergenic | 35.0% | |
| TTCATATTTCTTTAGGTGCG+GGG | + | chr8.1:10378189-10378208 | MS.gene58764:intron | 35.0% | |
| TTTGAGAATGTTGGATACTC+TGG | + | chr8.1:10380657-10380676 | MS.gene58764:intron | 35.0% | |
| ! | AAAAGGTACATACTAGACCA+TGG | + | chr8.1:10381250-10381269 | MS.gene58764:intron | 35.0% |
| ! | AATTTTATCCTTTCTGTGGC+AGG | + | chr8.1:10379592-10379611 | MS.gene58764:intron | 35.0% |
| ! | ATAGGGATTTGGAGTAAACT+CGG | - | chr8.1:10377760-10377779 | None:intergenic | 35.0% |
| ! | ATAGTTGCTTTCTTAGACCA+TGG | + | chr8.1:10377930-10377949 | MS.gene58764:intron | 35.0% |
| ! | ATGACATATAATTTGGGACG+AGG | + | chr8.1:10378881-10378900 | MS.gene58764:intron | 35.0% |
| ! | CAGAGATCTAAGATGAATGT+TGG | + | chr8.1:10379635-10379654 | MS.gene58764:CDS | 35.0% |
| ! | GAAATCTAAGATGACTGTTG+AGG | + | chr8.1:10379700-10379719 | MS.gene58764:CDS | 35.0% |
| ! | GAGATCTAAGATGAATGTTG+GGG | + | chr8.1:10379637-10379656 | MS.gene58764:CDS | 35.0% |
| ! | GCATCTCCAACATCAATTTT+TGG | - | chr8.1:10378480-10378499 | None:intergenic | 35.0% |
| ! | GGACTTGAGTCTTTTCAAAT+AGG | + | chr8.1:10380553-10380572 | MS.gene58764:intron | 35.0% |
| ! | TAAAGTGAGAGTATGTGCTA+AGG | - | chr8.1:10379321-10379340 | None:intergenic | 35.0% |
| ! | TGACATATAATTTGGGACGA+GGG | + | chr8.1:10378882-10378901 | MS.gene58764:intron | 35.0% |
| ! | TGAGGTACCACAAAATAGTA+AGG | - | chr8.1:10377279-10377298 | None:intergenic | 35.0% |
| ! | TGGAAGACCTTACTATTTTG+TGG | + | chr8.1:10377269-10377288 | MS.gene58764:CDS | 35.0% |
| ! | TTAGCTGCATTTCTTTTCTC+AGG | + | chr8.1:10381155-10381174 | MS.gene58764:intron | 35.0% |
| !! | GGATTTATCTTTTGGTTGGA+AGG | + | chr8.1:10379673-10379692 | MS.gene58764:CDS | 35.0% |
| !!! | AACATCAATTTTTGGTGCTG+AGG | - | chr8.1:10378472-10378491 | None:intergenic | 35.0% |
| AAACTCTGAATCAGCCAAGA+TGG | - | chr8.1:10379889-10379908 | None:intergenic | 40.0% | |
| AAAGAAGAATCCGATCCATC+TGG | + | chr8.1:10377249-10377268 | MS.gene58764:CDS | 40.0% | |
| AAAGTTTGACTCAGCACAGA+TGG | - | chr8.1:10378555-10378574 | None:intergenic | 40.0% | |
| AATGATCTGACGATCACGAT+TGG | - | chr8.1:10377538-10377557 | None:intergenic | 40.0% | |
| AATTGGCAATTTGGAAAGCC+AGG | - | chr8.1:10381977-10381996 | None:intergenic | 40.0% | |
| ACTATAAGCAGACTGCACAT+AGG | - | chr8.1:10377344-10377363 | None:intergenic | 40.0% | |
| ACTGGGGAATCAAGTGAATA+TGG | + | chr8.1:10378438-10378457 | MS.gene58764:CDS | 40.0% | |
| AGTGGGAACATGTTAAAGTG+AGG | - | chr8.1:10380388-10380407 | None:intergenic | 40.0% | |
| ATCTGTGCTGAGTCAAACTT+TGG | + | chr8.1:10378554-10378573 | MS.gene58764:CDS | 40.0% | |
| ATGTAATTCAACCCACTGAG+TGG | + | chr8.1:10381907-10381926 | MS.gene58764:intron | 40.0% | |
| CAGCTAAGAGAACAAGGTTA+AGG | + | chr8.1:10381226-10381245 | MS.gene58764:CDS | 40.0% | |
| CAGCTTAGCTTCACTTTAGA+CGG | + | chr8.1:10381569-10381588 | MS.gene58764:intron | 40.0% | |
| CATGATTCACTGACATCTTG+AGG | - | chr8.1:10377297-10377316 | None:intergenic | 40.0% | |
| CTAATTTGAGTGTGATTGGG+TGG | + | chr8.1:10382687-10382706 | MS.gene58764:intron | 40.0% | |
| CTATAAGCAGACTGCACATA+GGG | - | chr8.1:10377343-10377362 | None:intergenic | 40.0% | |
| CTTTCTCAGAAATGGTAAGC+AGG | + | chr8.1:10378346-10378365 | MS.gene58764:CDS | 40.0% | |
| GATTTATTGGAGAGCTTCAC+AGG | - | chr8.1:10378045-10378064 | None:intergenic | 40.0% | |
| GCACTATCTGTAGTCAATGT+GGG | + | chr8.1:10380532-10380551 | MS.gene58764:intron | 40.0% | |
| GCATAGGCTCTCTTAGATAT+AGG | + | chr8.1:10379463-10379482 | MS.gene58764:intron | 40.0% | |
| GCTGCTAATTTGAGTGTGAT+TGG | + | chr8.1:10382683-10382702 | MS.gene58764:intron | 40.0% | |
| GGAACAGGAAGAGCTAATTA+AGG | + | chr8.1:10382711-10382730 | MS.gene58764:intron | 40.0% | |
| GTGGGAACATGTTAAAGTGA+GGG | - | chr8.1:10380387-10380406 | None:intergenic | 40.0% | |
| GTTGTATATTCATCGGATCC+TGG | + | chr8.1:10381956-10381975 | MS.gene58764:intron | 40.0% | |
| TCAGTACATGTGGCAAAATC+AGG | + | chr8.1:10377878-10377897 | MS.gene58764:CDS | 40.0% | |
| TCTGTGCTGAGTCAAACTTT+GGG | + | chr8.1:10378555-10378574 | MS.gene58764:CDS | 40.0% | |
| TCTTACAGGTTGTGAGTTTC+TGG | - | chr8.1:10378412-10378431 | None:intergenic | 40.0% | |
| TGATGAAAACGATTCCATCG+AGG | + | chr8.1:10382272-10382291 | MS.gene58764:CDS | 40.0% | |
| TGGCTAGAATTATAGGGTCT+AGG | - | chr8.1:10380856-10380875 | None:intergenic | 40.0% | |
| TTGAATCATCAGTATGCAGC+TGG | + | chr8.1:10377840-10377859 | MS.gene58764:CDS | 40.0% | |
| ! | CAAAAAGGGGTCTTGTACAA+GGG | - | chr8.1:10379351-10379370 | None:intergenic | 40.0% |
| ! | TAGGGATTTGGAGTAAACTC+GGG | - | chr8.1:10377759-10377778 | None:intergenic | 40.0% |
| ! | TCTAAGATGAATGTTGGGGA+TGG | + | chr8.1:10379641-10379660 | MS.gene58764:CDS | 40.0% |
| ! | TCTAAGATGACTGTTGAGGA+TGG | + | chr8.1:10379704-10379723 | MS.gene58764:CDS | 40.0% |
| ! | TTGAAGCATGGGTTATGCAT+AGG | + | chr8.1:10380425-10380444 | MS.gene58764:intron | 40.0% |
| !! | AAGTTATTCTGAGGCATGTC+TGG | + | chr8.1:10382242-10382261 | MS.gene58764:CDS | 40.0% |
| !! | ACTCAGTGGGTTGAATTACA+TGG | - | chr8.1:10381908-10381927 | None:intergenic | 40.0% |
| !! | GGAATTAATGGGCTATGCAT+AGG | + | chr8.1:10379410-10379429 | MS.gene58764:intron | 40.0% |
| !! | GGTAAGCAATGGGTTAACAT+TGG | - | chr8.1:10382518-10382537 | None:intergenic | 40.0% |
| !!! | CAATTTTTGGTGCTGAGGAT+TGG | - | chr8.1:10378467-10378486 | None:intergenic | 40.0% |
| !!! | CATTCTTTGTTTTTCGGTGC+AGG | + | chr8.1:10377981-10378000 | MS.gene58764:intron | 40.0% |
| AACCCATGCTTCAAGCCATA+GGG | - | chr8.1:10380419-10380438 | None:intergenic | 45.0% | |
| ACAATCCTATGCTGCCACAT+TGG | + | chr8.1:10377413-10377432 | MS.gene58764:CDS | 45.0% | |
| ACCCCATTTGTAATCACCGT+GGG | + | chr8.1:10380287-10380306 | MS.gene58764:intron | 45.0% | |
| ACCGTGGGAGAAAAACACAA+GGG | + | chr8.1:10380302-10380321 | MS.gene58764:intron | 45.0% | |
| ACGTTCCTCACCTTATGAGT+CGG | - | chr8.1:10380488-10380507 | None:intergenic | 45.0% | |
| AGGAAAATCCTGCCACAGAA+AGG | - | chr8.1:10379603-10379622 | None:intergenic | 45.0% | |
| ATTTGAGTGTGATTGGGTGG+TGG | + | chr8.1:10382690-10382709 | MS.gene58764:intron | 45.0% | |
| CAATCCTATGCTGCCACATT+GGG | + | chr8.1:10377414-10377433 | MS.gene58764:CDS | 45.0% | |
| CCATGCTTCAAGCCAAAAAG+GGG | - | chr8.1:10379364-10379383 | None:intergenic | 45.0% | |
| CCCATGCTTCAAGCCAAAAA+GGG | - | chr8.1:10379365-10379384 | None:intergenic | 45.0% | |
| CTCCCACGGTGATTACAAAT+GGG | - | chr8.1:10380292-10380311 | None:intergenic | 45.0% | |
| CTGTGCTGAGTCAAACTTTG+GGG | + | chr8.1:10378556-10378575 | MS.gene58764:CDS | 45.0% | |
| GGCACTATCTGTAGTCAATG+TGG | + | chr8.1:10380531-10380550 | MS.gene58764:intron | 45.0% | |
| GGGAATCAGCTAAGAGAACA+AGG | + | chr8.1:10381220-10381239 | MS.gene58764:CDS | 45.0% | |
| GGTTAGCAGTTACTAGAGGA+TGG | + | chr8.1:10378216-10378235 | MS.gene58764:intron | 45.0% | |
| GTAAGGTCTTCCAGATGGAT+CGG | - | chr8.1:10377262-10377281 | None:intergenic | 45.0% | |
| TAACCCATGCTTCAAGCCAT+AGG | - | chr8.1:10380420-10380439 | None:intergenic | 45.0% | |
| TATAATCATCCACCTGCAGC+TGG | + | chr8.1:10377780-10377799 | MS.gene58764:CDS | 45.0% | |
| TCCCACGGTGATTACAAATG+GGG | - | chr8.1:10380291-10380310 | None:intergenic | 45.0% | |
| TCCCACTTATAAGACCCCTA+TGG | + | chr8.1:10380401-10380420 | MS.gene58764:intron | 45.0% | |
| TCTCCCACGGTGATTACAAA+TGG | - | chr8.1:10380293-10380312 | None:intergenic | 45.0% | |
| TCTTCACGTTCTTGCTGCTA+AGG | - | chr8.1:10382165-10382184 | None:intergenic | 45.0% | |
| TGTGGCAGCATAGGATTGTT+TGG | - | chr8.1:10377412-10377431 | None:intergenic | 45.0% | |
| TGTTGAGGATGGTGAGAGTA+AGG | + | chr8.1:10379715-10379734 | MS.gene58764:intron | 45.0% | |
| ! | ACCCTTGTGTTTTTCTCCCA+CGG | - | chr8.1:10380306-10380325 | None:intergenic | 45.0% |
| ! | ACGATCACGATTGGTTGACA+AGG | - | chr8.1:10377529-10377548 | None:intergenic | 45.0% |
| ! | AGATGCTGATCGAGTTGTGT+TGG | + | chr8.1:10378494-10378513 | MS.gene58764:CDS | 45.0% |
| ! | AGCCATAGGGGTCTTATAAG+TGG | - | chr8.1:10380406-10380425 | None:intergenic | 45.0% |
| ! | CCAAAAAGGGGTCTTGTACA+AGG | - | chr8.1:10379352-10379371 | None:intergenic | 45.0% |
| ! | CCTCATAAGACCGACTCATA+AGG | + | chr8.1:10380475-10380494 | MS.gene58764:intron | 45.0% |
| ! | CCTTATGAGTCGGTCTTATG+AGG | - | chr8.1:10380478-10380497 | None:intergenic | 45.0% |
| ! | CCTTGTACAAGACCCCTTTT+TGG | + | chr8.1:10379349-10379368 | MS.gene58764:intron | 45.0% |
| ! | CGTCTAAAGTGAAGCTAAGC+TGG | - | chr8.1:10381571-10381590 | None:intergenic | 45.0% |
| ! | CTTGGCTGATTCAGAGTTTG+AGG | + | chr8.1:10379890-10379909 | MS.gene58764:CDS | 45.0% |
| ! | GCCATAGGGGTCTTATAAGT+GGG | - | chr8.1:10380405-10380424 | None:intergenic | 45.0% |
| ! | TAAGACCGACTCATAAGGTG+AGG | + | chr8.1:10380480-10380499 | MS.gene58764:intron | 45.0% |
| ! | TTGAAGCATGGGCTATGCAT+AGG | + | chr8.1:10379373-10379392 | MS.gene58764:intron | 45.0% |
| !!! | CCCTTTTTGGCTTGAAGCAT+GGG | + | chr8.1:10379362-10379381 | MS.gene58764:intron | 45.0% |
| !! | ATATAAAATTGAAAAAATAA+GGG | - | chr8.1:10382314-10382333 | None:intergenic | 5.0% |
| AAGCTAAGCTGGCAGAGTTC+TGG | - | chr8.1:10381560-10381579 | None:intergenic | 50.0% | |
| AAGTCTGCTCTTCCACTCAG+TGG | - | chr8.1:10381922-10381941 | None:intergenic | 50.0% | |
| ACACCGACACTTCAGACTGA+GGG | - | chr8.1:10380687-10380706 | None:intergenic | 50.0% | |
| ACATTGGGCTTCACCTATGC+AGG | + | chr8.1:10377429-10377448 | MS.gene58764:CDS | 50.0% | |
| ACCCATGCTTCAAGCCATAG+GGG | - | chr8.1:10380418-10380437 | None:intergenic | 50.0% | |
| ACCCCTATGGCTTGAAGCAT+GGG | + | chr8.1:10380414-10380433 | MS.gene58764:intron | 50.0% | |
| AGTCTGCTCTTCCACTCAGT+GGG | - | chr8.1:10381921-10381940 | None:intergenic | 50.0% | |
| ATGTAAGAACCAGCTGCAGG+TGG | - | chr8.1:10377792-10377811 | None:intergenic | 50.0% | |
| ATTTCTTTAGGTGCGGGGCT+GGG | + | chr8.1:10378194-10378213 | MS.gene58764:intron | 50.0% | |
| CACCGTGGGAGAAAAACACA+AGG | + | chr8.1:10380301-10380320 | MS.gene58764:intron | 50.0% | |
| CGTGTGGCAACTGATCTTGT+AGG | + | chr8.1:10380902-10380921 | MS.gene58764:intron | 50.0% | |
| CTCATGTAAGAACCAGCTGC+AGG | - | chr8.1:10377795-10377814 | None:intergenic | 50.0% | |
| GACCCCATTTGTAATCACCG+TGG | + | chr8.1:10380286-10380305 | MS.gene58764:intron | 50.0% | |
| GAGTTTGAGGACAGTCGTCA+AGG | + | chr8.1:10379903-10379922 | MS.gene58764:CDS | 50.0% | |
| GCATAGGTTCTCGCAGACAT+TGG | + | chr8.1:10380441-10380460 | MS.gene58764:intron | 50.0% | |
| GCCCATGCTTCAAGCCAAAA+AGG | - | chr8.1:10379366-10379385 | None:intergenic | 50.0% | |
| GGTACATACTAGACCATGGC+TGG | + | chr8.1:10381254-10381273 | MS.gene58764:intron | 50.0% | |
| TACACCGACACTTCAGACTG+AGG | - | chr8.1:10380688-10380707 | None:intergenic | 50.0% | |
| TATTTCTTTAGGTGCGGGGC+TGG | + | chr8.1:10378193-10378212 | MS.gene58764:intron | 50.0% | |
| TGCATAGGTGAAGCCCAATG+TGG | - | chr8.1:10377430-10377449 | None:intergenic | 50.0% | |
| TGTTGGGGATGGTGAGAACA+AGG | + | chr8.1:10379652-10379671 | MS.gene58764:CDS | 50.0% | |
| ! | ACACCCTCAGTCTGAAGTGT+CGG | + | chr8.1:10380681-10380700 | MS.gene58764:intron | 50.0% |
| ! | CAGGTGTGTTGTTCTTGCCA+TGG | - | chr8.1:10377950-10377969 | None:intergenic | 50.0% |
| ! | CTGAGTCAAACTTTGGGGAC+AGG | + | chr8.1:10378561-10378580 | MS.gene58764:CDS | 50.0% |
| ! | CTGGGGTTAGCAGTTACTAG+AGG | + | chr8.1:10378212-10378231 | MS.gene58764:intron | 50.0% |
| ! | GCACTGACACAATACCGACT+CGG | + | chr8.1:10380628-10380647 | MS.gene58764:intron | 50.0% |
| !!! | CCCCTTTTTGGCTTGAAGCA+TGG | + | chr8.1:10379361-10379380 | MS.gene58764:intron | 50.0% |
| GAAGCCCAATGTGGCAGCAT+AGG | - | chr8.1:10377421-10377440 | None:intergenic | 55.0% | |
| GACCCCTATGGCTTGAAGCA+TGG | + | chr8.1:10380413-10380432 | MS.gene58764:intron | 55.0% | |
| TTTCTTTAGGTGCGGGGCTG+GGG | + | chr8.1:10378195-10378214 | MS.gene58764:intron | 55.0% | |
| ! | AACTTTGGGGACAGGCGTCA+AGG | + | chr8.1:10378569-10378588 | MS.gene58764:CDS | 55.0% |
| !! | GTGTGATTGGGTGGTGGAAC+AGG | + | chr8.1:10382696-10382715 | MS.gene58764:intron | 55.0% |
| CATGGCTGGTGCAATGCAGC+GGG | + | chr8.1:10381268-10381287 | MS.gene58764:intron | 60.0% | |
| CCATGGCTGGTGCAATGCAG+CGG | + | chr8.1:10381267-10381286 | MS.gene58764:intron | 60.0% | |
| CCGCTGCATTGCACCAGCCA+TGG | - | chr8.1:10381270-10381289 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 10377243 | 10382786 | 10377243 | ID=MS.gene58764 |
| chr8.1 | mRNA | 10377243 | 10382786 | 10377243 | ID=MS.gene58764.t1;Parent=MS.gene58764 |
| chr8.1 | exon | 10377243 | 10377302 | 10377243 | ID=MS.gene58764.t1.exon1;Parent=MS.gene58764.t1 |
| chr8.1 | CDS | 10377243 | 10377302 | 10377243 | ID=cds.MS.gene58764.t1;Parent=MS.gene58764.t1 |
| chr8.1 | exon | 10377400 | 10377450 | 10377400 | ID=MS.gene58764.t1.exon2;Parent=MS.gene58764.t1 |
| chr8.1 | CDS | 10377400 | 10377450 | 10377400 | ID=cds.MS.gene58764.t1;Parent=MS.gene58764.t1 |
| chr8.1 | exon | 10377744 | 10377899 | 10377744 | ID=MS.gene58764.t1.exon3;Parent=MS.gene58764.t1 |
| chr8.1 | CDS | 10377744 | 10377899 | 10377744 | ID=cds.MS.gene58764.t1;Parent=MS.gene58764.t1 |
| chr8.1 | exon | 10378003 | 10378077 | 10378003 | ID=MS.gene58764.t1.exon4;Parent=MS.gene58764.t1 |
| chr8.1 | CDS | 10378003 | 10378077 | 10378003 | ID=cds.MS.gene58764.t1;Parent=MS.gene58764.t1 |
| chr8.1 | exon | 10378333 | 10378623 | 10378333 | ID=MS.gene58764.t1.exon5;Parent=MS.gene58764.t1 |
| chr8.1 | CDS | 10378333 | 10378623 | 10378333 | ID=cds.MS.gene58764.t1;Parent=MS.gene58764.t1 |
| chr8.1 | exon | 10379614 | 10379725 | 10379614 | ID=MS.gene58764.t1.exon6;Parent=MS.gene58764.t1 |
| chr8.1 | CDS | 10379614 | 10379725 | 10379614 | ID=cds.MS.gene58764.t1;Parent=MS.gene58764.t1 |
| chr8.1 | exon | 10379881 | 10379969 | 10379881 | ID=MS.gene58764.t1.exon7;Parent=MS.gene58764.t1 |
| chr8.1 | CDS | 10379881 | 10379969 | 10379881 | ID=cds.MS.gene58764.t1;Parent=MS.gene58764.t1 |
| chr8.1 | exon | 10381177 | 10381254 | 10381177 | ID=MS.gene58764.t1.exon8;Parent=MS.gene58764.t1 |
| chr8.1 | CDS | 10381177 | 10381254 | 10381177 | ID=cds.MS.gene58764.t1;Parent=MS.gene58764.t1 |
| chr8.1 | exon | 10382168 | 10382293 | 10382168 | ID=MS.gene58764.t1.exon9;Parent=MS.gene58764.t1 |
| chr8.1 | CDS | 10382168 | 10382293 | 10382168 | ID=cds.MS.gene58764.t1;Parent=MS.gene58764.t1 |
| chr8.1 | exon | 10382718 | 10382786 | 10382718 | ID=MS.gene58764.t1.exon10;Parent=MS.gene58764.t1 |
| chr8.1 | CDS | 10382718 | 10382786 | 10382718 | ID=cds.MS.gene58764.t1;Parent=MS.gene58764.t1 |
| Gene Sequence |
| Protein sequence |
