Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58803.t1 | XP_003613488.1 | 75.1 | 241 | 58 | 1 | 1 | 241 | 1 | 239 | 1.80E-84 | 322.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58803.t1 | Q69WS3 | 71.4 | 147 | 39 | 2 | 98 | 241 | 110 | 256 | 5.5e-50 | 199.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58803.t1 | G7K714 | 75.1 | 241 | 58 | 1 | 1 | 241 | 1 | 239 | 1.3e-84 | 322.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene58803.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58803.t1 | MTR_5g037250 | 85.477 | 241 | 33 | 1 | 1 | 241 | 1 | 239 | 1.32e-154 | 429 |
MS.gene58803.t1 | MTR_8g062240 | 60.902 | 266 | 66 | 8 | 5 | 241 | 22 | 278 | 1.12e-94 | 279 |
MS.gene58803.t1 | MTR_8g012290 | 79.121 | 91 | 19 | 0 | 105 | 195 | 282 | 372 | 1.10e-44 | 156 |
MS.gene58803.t1 | MTR_8g012290 | 79.121 | 91 | 19 | 0 | 105 | 195 | 282 | 372 | 1.13e-44 | 156 |
MS.gene58803.t1 | MTR_7g053410 | 65.546 | 119 | 37 | 1 | 77 | 195 | 284 | 398 | 4.60e-44 | 155 |
MS.gene58803.t1 | MTR_7g053410 | 63.492 | 126 | 42 | 1 | 77 | 202 | 284 | 405 | 6.42e-44 | 155 |
MS.gene58803.t1 | MTR_3g116770 | 61.654 | 133 | 40 | 3 | 74 | 196 | 148 | 279 | 1.72e-42 | 149 |
MS.gene58803.t1 | MTR_3g116770 | 61.654 | 133 | 40 | 3 | 74 | 196 | 148 | 279 | 1.85e-42 | 148 |
MS.gene58803.t1 | MTR_4g070320 | 50.802 | 187 | 70 | 6 | 23 | 202 | 61 | 232 | 7.66e-42 | 145 |
MS.gene58803.t1 | MTR_5g048860 | 58.779 | 131 | 50 | 3 | 93 | 220 | 343 | 472 | 3.56e-40 | 145 |
MS.gene58803.t1 | MTR_8g099880 | 80.952 | 84 | 15 | 1 | 102 | 185 | 134 | 216 | 2.85e-39 | 138 |
MS.gene58803.t1 | MTR_8g065740 | 72.340 | 94 | 25 | 1 | 93 | 185 | 283 | 376 | 2.95e-39 | 141 |
MS.gene58803.t1 | MTR_3g498825 | 82.278 | 79 | 14 | 0 | 107 | 185 | 140 | 218 | 4.32e-39 | 138 |
MS.gene58803.t1 | MTR_1g017350 | 70.968 | 93 | 26 | 1 | 94 | 185 | 239 | 331 | 5.84e-38 | 137 |
MS.gene58803.t1 | MTR_1g017350 | 70.968 | 93 | 26 | 1 | 94 | 185 | 239 | 331 | 6.14e-38 | 137 |
MS.gene58803.t1 | MTR_1g017350 | 70.968 | 93 | 26 | 1 | 94 | 185 | 239 | 331 | 7.47e-38 | 137 |
MS.gene58803.t1 | MTR_1g017350 | 70.968 | 93 | 26 | 1 | 94 | 185 | 239 | 331 | 7.49e-38 | 137 |
MS.gene58803.t1 | MTR_1g059270 | 66.000 | 100 | 29 | 2 | 111 | 210 | 157 | 251 | 9.04e-37 | 130 |
MS.gene58803.t1 | MTR_1g059270 | 78.667 | 75 | 16 | 0 | 111 | 185 | 157 | 231 | 5.56e-36 | 130 |
MS.gene58803.t1 | MTR_7g092510 | 75.000 | 80 | 20 | 0 | 108 | 187 | 167 | 246 | 5.33e-35 | 127 |
MS.gene58803.t1 | MTR_6g084120 | 46.825 | 126 | 51 | 2 | 75 | 200 | 123 | 232 | 1.75e-26 | 103 |
MS.gene58803.t1 | MTR_4g131160 | 66.667 | 66 | 21 | 1 | 114 | 179 | 196 | 260 | 1.67e-20 | 89.7 |
MS.gene58803.t1 | MTR_4g131160 | 66.667 | 66 | 21 | 1 | 114 | 179 | 199 | 263 | 1.95e-20 | 89.4 |
MS.gene58803.t1 | MTR_1g080890 | 60.000 | 75 | 29 | 1 | 105 | 179 | 184 | 257 | 2.57e-20 | 88.6 |
MS.gene58803.t1 | MTR_1g070870 | 38.816 | 152 | 85 | 3 | 58 | 207 | 67 | 212 | 5.60e-16 | 75.5 |
MS.gene58803.t1 | MTR_1g069155 | 47.500 | 80 | 40 | 2 | 116 | 195 | 319 | 396 | 4.45e-15 | 74.3 |
MS.gene58803.t1 | MTR_1g070870 | 44.660 | 103 | 56 | 1 | 105 | 207 | 114 | 215 | 1.40e-14 | 71.6 |
MS.gene58803.t1 | MTR_4g065870 | 53.846 | 65 | 30 | 0 | 114 | 178 | 355 | 419 | 3.63e-14 | 71.6 |
MS.gene58803.t1 | MTR_1g084980 | 48.438 | 64 | 32 | 1 | 116 | 179 | 464 | 526 | 3.72e-14 | 71.6 |
MS.gene58803.t1 | MTR_4g107320 | 75.556 | 45 | 10 | 1 | 132 | 175 | 60 | 104 | 1.33e-13 | 66.2 |
MS.gene58803.t1 | MTR_4g065870 | 53.226 | 62 | 29 | 0 | 114 | 175 | 355 | 416 | 1.94e-13 | 69.3 |
MS.gene58803.t1 | MTR_2g098310 | 49.254 | 67 | 34 | 0 | 112 | 178 | 330 | 396 | 2.05e-13 | 69.3 |
MS.gene58803.t1 | MTR_4g033295 | 47.692 | 65 | 34 | 0 | 114 | 178 | 118 | 182 | 5.14e-13 | 65.9 |
MS.gene58803.t1 | MTR_7g099540 | 42.045 | 88 | 49 | 2 | 108 | 195 | 246 | 331 | 5.41e-13 | 68.2 |
MS.gene58803.t1 | MTR_2g098310 | 50.000 | 66 | 33 | 0 | 112 | 177 | 330 | 395 | 5.44e-13 | 68.2 |
MS.gene58803.t1 | MTR_4g033295 | 46.269 | 67 | 35 | 1 | 114 | 179 | 118 | 184 | 1.03e-12 | 65.1 |
MS.gene58803.t1 | MTR_1g052470 | 49.254 | 67 | 34 | 0 | 114 | 180 | 298 | 364 | 2.38e-12 | 66.2 |
MS.gene58803.t1 | MTR_1g019240 | 35.106 | 94 | 55 | 2 | 87 | 180 | 63 | 150 | 5.93e-12 | 64.3 |
MS.gene58803.t1 | MTR_7g092540 | 43.243 | 74 | 42 | 0 | 114 | 187 | 243 | 316 | 7.80e-12 | 64.3 |
MS.gene58803.t1 | MTR_5g005110 | 31.677 | 161 | 95 | 5 | 26 | 178 | 134 | 287 | 1.27e-11 | 63.5 |
MS.gene58803.t1 | MTR_7g092540 | 46.154 | 65 | 35 | 0 | 114 | 178 | 243 | 307 | 1.68e-11 | 63.2 |
MS.gene58803.t1 | MTR_8g036235 | 47.692 | 65 | 34 | 0 | 114 | 178 | 316 | 380 | 1.88e-11 | 63.5 |
MS.gene58803.t1 | MTR_1g018090 | 48.438 | 64 | 32 | 1 | 115 | 178 | 275 | 337 | 2.35e-11 | 63.2 |
MS.gene58803.t1 | MTR_3g103030 | 43.478 | 92 | 43 | 3 | 90 | 178 | 207 | 292 | 2.43e-11 | 62.8 |
MS.gene58803.t1 | MTR_7g099540 | 43.056 | 72 | 40 | 1 | 108 | 179 | 246 | 316 | 5.41e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58803.t1 | AT1G59640 | 53.571 | 280 | 75 | 9 | 1 | 241 | 1 | 264 | 9.61e-82 | 245 |
MS.gene58803.t1 | AT1G59640 | 48.315 | 267 | 80 | 10 | 1 | 225 | 1 | 251 | 1.10e-57 | 187 |
MS.gene58803.t1 | AT5G62610 | 44.043 | 277 | 103 | 8 | 4 | 241 | 18 | 281 | 8.84e-57 | 182 |
MS.gene58803.t1 | AT5G62610 | 44.043 | 277 | 103 | 8 | 4 | 241 | 18 | 281 | 8.84e-57 | 182 |
MS.gene58803.t1 | AT3G23690 | 58.710 | 155 | 50 | 4 | 47 | 187 | 110 | 264 | 9.32e-46 | 156 |
MS.gene58803.t1 | AT1G68920 | 57.143 | 147 | 60 | 3 | 76 | 220 | 264 | 409 | 6.02e-44 | 154 |
MS.gene58803.t1 | AT1G68920 | 57.143 | 147 | 60 | 3 | 76 | 220 | 265 | 410 | 6.05e-44 | 154 |
MS.gene58803.t1 | AT1G68920 | 57.143 | 147 | 60 | 3 | 76 | 220 | 265 | 410 | 6.05e-44 | 154 |
MS.gene58803.t1 | AT1G68920 | 57.143 | 147 | 60 | 3 | 76 | 220 | 265 | 410 | 6.05e-44 | 154 |
MS.gene58803.t1 | AT3G07340 | 53.143 | 175 | 57 | 4 | 13 | 187 | 182 | 331 | 7.04e-44 | 153 |
MS.gene58803.t1 | AT3G07340 | 51.913 | 183 | 63 | 5 | 13 | 195 | 182 | 339 | 8.24e-44 | 153 |
MS.gene58803.t1 | AT5G50915 | 51.235 | 162 | 75 | 3 | 27 | 185 | 47 | 207 | 3.83e-43 | 147 |
MS.gene58803.t1 | AT5G50915 | 51.235 | 162 | 75 | 3 | 27 | 185 | 47 | 207 | 3.83e-43 | 147 |
MS.gene58803.t1 | AT5G50915 | 51.553 | 161 | 74 | 3 | 27 | 184 | 47 | 206 | 1.34e-42 | 146 |
MS.gene58803.t1 | AT5G50915 | 51.553 | 161 | 74 | 3 | 27 | 184 | 47 | 206 | 1.34e-42 | 146 |
MS.gene58803.t1 | AT5G48560 | 85.185 | 81 | 12 | 0 | 105 | 185 | 292 | 372 | 1.96e-42 | 150 |
MS.gene58803.t1 | AT5G48560 | 85.185 | 81 | 12 | 0 | 105 | 185 | 292 | 372 | 3.45e-42 | 150 |
MS.gene58803.t1 | AT4G34530 | 80.247 | 81 | 16 | 0 | 108 | 188 | 166 | 246 | 4.50e-40 | 141 |
MS.gene58803.t1 | AT2G18300 | 46.369 | 179 | 71 | 4 | 37 | 210 | 121 | 279 | 4.95e-40 | 140 |
MS.gene58803.t1 | AT1G26260 | 70.000 | 100 | 26 | 1 | 90 | 185 | 144 | 243 | 6.96e-40 | 140 |
MS.gene58803.t1 | AT2G18300 | 45.652 | 184 | 75 | 4 | 32 | 210 | 116 | 279 | 1.17e-39 | 140 |
MS.gene58803.t1 | AT1G26260 | 70.000 | 100 | 26 | 1 | 90 | 185 | 173 | 272 | 1.27e-39 | 140 |
MS.gene58803.t1 | AT1G26260 | 70.000 | 100 | 26 | 1 | 90 | 185 | 195 | 294 | 1.62e-39 | 140 |
MS.gene58803.t1 | AT1G26260 | 70.000 | 100 | 26 | 1 | 90 | 185 | 195 | 294 | 1.62e-39 | 140 |
MS.gene58803.t1 | AT1G26260 | 70.000 | 100 | 26 | 1 | 90 | 185 | 195 | 294 | 1.62e-39 | 140 |
MS.gene58803.t1 | AT1G26260 | 70.000 | 100 | 26 | 1 | 90 | 185 | 195 | 294 | 1.62e-39 | 140 |
MS.gene58803.t1 | AT1G10120 | 73.563 | 87 | 23 | 0 | 99 | 185 | 191 | 277 | 4.27e-39 | 139 |
MS.gene58803.t1 | AT1G10120 | 73.563 | 87 | 23 | 0 | 99 | 185 | 191 | 277 | 4.27e-39 | 139 |
MS.gene58803.t1 | AT4G36540 | 60.317 | 126 | 44 | 3 | 82 | 207 | 113 | 232 | 9.45e-39 | 137 |
MS.gene58803.t1 | AT2G18300 | 45.109 | 184 | 74 | 4 | 32 | 210 | 116 | 277 | 9.51e-39 | 137 |
MS.gene58803.t1 | AT4G36540 | 67.308 | 104 | 30 | 2 | 82 | 185 | 113 | 212 | 5.86e-38 | 134 |
MS.gene58803.t1 | AT2G42300 | 73.750 | 80 | 21 | 0 | 108 | 187 | 179 | 258 | 9.16e-36 | 128 |
MS.gene58803.t1 | AT3G57800 | 73.810 | 84 | 22 | 0 | 104 | 187 | 194 | 277 | 1.41e-35 | 130 |
MS.gene58803.t1 | AT2G42300 | 73.750 | 80 | 21 | 0 | 108 | 187 | 179 | 258 | 5.98e-35 | 127 |
MS.gene58803.t1 | AT1G73830 | 55.000 | 120 | 54 | 0 | 67 | 186 | 100 | 219 | 9.20e-35 | 125 |
MS.gene58803.t1 | AT1G73830 | 55.000 | 120 | 54 | 0 | 67 | 186 | 100 | 219 | 9.93e-35 | 125 |
MS.gene58803.t1 | AT1G18400 | 73.333 | 75 | 20 | 0 | 112 | 186 | 143 | 217 | 1.33e-33 | 122 |
MS.gene58803.t1 | AT1G25330 | 69.231 | 78 | 24 | 0 | 109 | 186 | 99 | 176 | 1.63e-33 | 120 |
MS.gene58803.t1 | AT1G18400 | 73.333 | 75 | 20 | 0 | 112 | 186 | 143 | 217 | 1.99e-33 | 122 |
MS.gene58803.t1 | AT3G57800 | 47.328 | 131 | 22 | 1 | 104 | 187 | 194 | 324 | 9.98e-27 | 107 |
MS.gene58803.t1 | AT2G24260 | 60.274 | 73 | 28 | 1 | 107 | 179 | 28 | 99 | 1.91e-21 | 90.1 |
MS.gene58803.t1 | AT4G30980 | 49.038 | 104 | 44 | 3 | 76 | 179 | 100 | 194 | 6.53e-21 | 89.7 |
MS.gene58803.t1 | AT5G58010 | 66.667 | 66 | 21 | 1 | 114 | 179 | 99 | 163 | 1.47e-20 | 88.6 |
MS.gene58803.t1 | AT2G24260 | 60.274 | 73 | 28 | 1 | 107 | 179 | 131 | 202 | 1.72e-20 | 89.0 |
MS.gene58803.t1 | AT4G30980 | 66.667 | 66 | 21 | 1 | 114 | 179 | 178 | 242 | 1.94e-20 | 89.0 |
MS.gene58803.t1 | AT2G42300 | 80.435 | 46 | 9 | 0 | 108 | 153 | 179 | 224 | 4.41e-19 | 83.2 |
MS.gene58803.t1 | AT2G42300 | 80.435 | 46 | 9 | 0 | 108 | 153 | 179 | 224 | 4.41e-19 | 83.2 |
MS.gene58803.t1 | AT2G42300 | 80.435 | 46 | 9 | 0 | 108 | 153 | 179 | 224 | 5.44e-19 | 83.2 |
MS.gene58803.t1 | AT2G20180 | 50.794 | 63 | 30 | 1 | 117 | 179 | 210 | 271 | 2.42e-14 | 72.0 |
MS.gene58803.t1 | AT2G20180 | 50.794 | 63 | 30 | 1 | 117 | 179 | 210 | 271 | 2.42e-14 | 72.0 |
MS.gene58803.t1 | AT2G20180 | 50.794 | 63 | 30 | 1 | 117 | 179 | 210 | 271 | 2.42e-14 | 72.0 |
MS.gene58803.t1 | AT2G20180 | 50.794 | 63 | 30 | 1 | 117 | 179 | 281 | 342 | 3.74e-14 | 71.6 |
MS.gene58803.t1 | AT2G20180 | 50.794 | 63 | 30 | 1 | 117 | 179 | 281 | 342 | 3.74e-14 | 71.6 |
MS.gene58803.t1 | AT2G20180 | 50.794 | 63 | 30 | 1 | 117 | 179 | 281 | 342 | 3.74e-14 | 71.6 |
MS.gene58803.t1 | AT2G20180 | 50.794 | 63 | 30 | 1 | 117 | 179 | 281 | 342 | 3.74e-14 | 71.6 |
MS.gene58803.t1 | AT1G09530 | 48.438 | 64 | 32 | 1 | 116 | 179 | 339 | 401 | 3.74e-14 | 71.6 |
MS.gene58803.t1 | AT1G09530 | 48.438 | 64 | 32 | 1 | 116 | 179 | 339 | 401 | 3.74e-14 | 71.6 |
MS.gene58803.t1 | AT1G09530 | 48.438 | 64 | 32 | 1 | 116 | 179 | 339 | 401 | 3.74e-14 | 71.6 |
MS.gene58803.t1 | AT1G09530 | 48.438 | 64 | 32 | 1 | 116 | 179 | 339 | 401 | 3.74e-14 | 71.6 |
MS.gene58803.t1 | AT1G09530 | 48.438 | 64 | 32 | 1 | 116 | 179 | 339 | 401 | 3.74e-14 | 71.6 |
MS.gene58803.t1 | AT1G09530 | 48.438 | 64 | 32 | 1 | 116 | 179 | 339 | 401 | 3.74e-14 | 71.6 |
MS.gene58803.t1 | AT4G28815 | 45.946 | 74 | 38 | 2 | 117 | 189 | 71 | 143 | 1.37e-13 | 68.2 |
MS.gene58803.t1 | AT4G02590 | 41.803 | 122 | 60 | 4 | 58 | 179 | 37 | 147 | 2.29e-13 | 67.8 |
MS.gene58803.t1 | AT4G28790 | 30.818 | 159 | 98 | 4 | 31 | 179 | 179 | 335 | 2.39e-13 | 69.3 |
MS.gene58803.t1 | AT4G28815 | 45.946 | 74 | 38 | 2 | 117 | 189 | 147 | 219 | 4.03e-13 | 67.8 |
MS.gene58803.t1 | AT4G28800 | 50.000 | 62 | 30 | 1 | 117 | 178 | 252 | 312 | 4.06e-13 | 68.6 |
MS.gene58803.t1 | AT4G02590 | 41.803 | 122 | 60 | 4 | 58 | 179 | 100 | 210 | 5.83e-13 | 67.4 |
MS.gene58803.t1 | AT4G02590 | 41.803 | 122 | 60 | 4 | 58 | 179 | 100 | 210 | 5.83e-13 | 67.4 |
MS.gene58803.t1 | AT1G51140 | 51.562 | 64 | 31 | 0 | 114 | 177 | 304 | 367 | 9.79e-13 | 67.4 |
MS.gene58803.t1 | AT4G28800 | 36.220 | 127 | 58 | 5 | 117 | 222 | 264 | 388 | 1.16e-12 | 67.4 |
MS.gene58803.t1 | AT4G36930 | 34.821 | 112 | 69 | 3 | 120 | 229 | 197 | 306 | 1.23e-12 | 67.0 |
MS.gene58803.t1 | AT2G20180 | 50.000 | 60 | 29 | 1 | 117 | 176 | 281 | 339 | 1.54e-12 | 66.6 |
MS.gene58803.t1 | AT1G03040 | 59.091 | 66 | 26 | 1 | 114 | 179 | 139 | 203 | 1.61e-12 | 66.2 |
MS.gene58803.t1 | AT1G03040 | 59.091 | 66 | 26 | 1 | 114 | 179 | 144 | 208 | 1.90e-12 | 65.9 |
MS.gene58803.t1 | AT1G03040 | 48.837 | 86 | 43 | 1 | 114 | 199 | 144 | 228 | 2.32e-12 | 65.9 |
MS.gene58803.t1 | AT1G35460 | 40.000 | 75 | 45 | 0 | 114 | 188 | 181 | 255 | 4.83e-12 | 64.3 |
MS.gene58803.t1 | AT2G46970 | 37.895 | 95 | 53 | 2 | 90 | 179 | 172 | 265 | 6.54e-12 | 64.7 |
MS.gene58803.t1 | AT2G46970 | 37.895 | 95 | 53 | 2 | 90 | 179 | 163 | 256 | 6.59e-12 | 64.7 |
MS.gene58803.t1 | AT2G46970 | 37.895 | 95 | 53 | 2 | 90 | 179 | 194 | 287 | 6.76e-12 | 64.7 |
MS.gene58803.t1 | AT2G42280 | 46.875 | 64 | 34 | 0 | 114 | 177 | 279 | 342 | 9.45e-12 | 64.3 |
MS.gene58803.t1 | AT4G09180 | 43.284 | 67 | 38 | 0 | 112 | 178 | 182 | 248 | 1.14e-11 | 63.2 |
MS.gene58803.t1 | AT4G28790 | 30.323 | 155 | 96 | 4 | 31 | 175 | 179 | 331 | 1.32e-11 | 63.9 |
MS.gene58803.t1 | AT1G27740 | 31.293 | 147 | 69 | 2 | 32 | 178 | 116 | 230 | 1.36e-11 | 63.2 |
MS.gene58803.t1 | AT2G42280 | 48.485 | 66 | 32 | 1 | 114 | 177 | 279 | 344 | 1.56e-11 | 63.5 |
MS.gene58803.t1 | AT4G00050 | 47.692 | 65 | 33 | 1 | 114 | 178 | 105 | 168 | 2.43e-11 | 62.8 |
MS.gene58803.t1 | AT2G43140 | 46.377 | 69 | 37 | 0 | 114 | 182 | 231 | 299 | 2.71e-11 | 62.8 |
MS.gene58803.t1 | AT2G43140 | 46.377 | 69 | 37 | 0 | 114 | 182 | 134 | 202 | 3.83e-11 | 61.2 |
MS.gene58803.t1 | AT4G00050 | 47.692 | 65 | 33 | 1 | 114 | 178 | 207 | 270 | 4.16e-11 | 62.4 |
MS.gene58803.t1 | AT4G00050 | 47.692 | 65 | 33 | 1 | 114 | 178 | 207 | 270 | 5.30e-11 | 62.0 |
Find 67 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCAGTAGCTTGACCCCTTC+TGG | 0.262138 | 5.3:-60346827 | None:intergenic |
GGGGCTAAACTGCGGTCTTC+TGG | 0.273092 | 5.3:-60345673 | None:intergenic |
ACATGGATGTAGTCTTTCTT+AGG | 0.315186 | 5.3:-60346799 | None:intergenic |
GCCACGGCCACCACCATTGC+CGG | 0.331116 | 5.3:-60345805 | None:intergenic |
TGAAAGGATGAAAACTCTTC+AGG | 0.347449 | 5.3:+60347672 | MS.gene58803:CDS |
ATACTCTTTCTGCAAGACTA+TGG | 0.386857 | 5.3:-60346852 | None:intergenic |
CGTATCATCTCCCGGAGATC+TGG | 0.389824 | 5.3:+60345646 | MS.gene58803:CDS |
AAAGGAGAAGAAAACAGTTC+AGG | 0.396640 | 5.3:+60346742 | MS.gene58803:CDS |
CATTGGAAAATCTCCGAAGC+TGG | 0.412609 | 5.3:-60345694 | None:intergenic |
CTTCTGGACTGCCAGATCTC+CGG | 0.419175 | 5.3:-60345657 | None:intergenic |
TCAGTTAAATGCGTTTCAAC+CGG | 0.427861 | 5.3:+60345786 | MS.gene58803:CDS |
ACACTGATGGACAGGCTAGA+AGG | 0.430987 | 5.3:+60347638 | MS.gene58803:intron |
ACCGGCAATGGTGGTGGCCG+TGG | 0.442087 | 5.3:+60345804 | MS.gene58803:CDS |
TTCTGGACTGCCAGATCTCC+GGG | 0.448211 | 5.3:-60345656 | None:intergenic |
ACTCTTCAGGATTTAGTCCC+TGG | 0.449489 | 5.3:+60347685 | MS.gene58803:CDS |
CTACTTGGTGGTGAAGTGAT+TGG | 0.461423 | 5.3:-60347986 | None:intergenic |
GTGGTAGTGGTGATGGAAAA+AGG | 0.464313 | 5.3:+60346698 | MS.gene58803:CDS |
GTGGGCAATTACCACGTTGT+TGG | 0.465601 | 5.3:-60345832 | None:intergenic |
ATGTAGTCTTTCTTAGGATG+TGG | 0.471510 | 5.3:-60346793 | None:intergenic |
CCGCAGTTTAGCCCCAGCTT+CGG | 0.487641 | 5.3:+60345681 | MS.gene58803:CDS |
AACCATACCTTGTTGCAACC+AGG | 0.489186 | 5.3:-60347703 | None:intergenic |
TTACATATGCAGCTGGGAGG+TGG | 0.500933 | 5.3:+60348637 | MS.gene58803:CDS |
GTTTCAACCGGCAATGGTGG+TGG | 0.501162 | 5.3:+60345798 | MS.gene58803:CDS |
AGATAATTCACACCTCTACT+TGG | 0.503743 | 5.3:-60348001 | None:intergenic |
AGAGTGGTTACATATGCAGC+TGG | 0.504135 | 5.3:+60348630 | MS.gene58803:CDS |
ATTGGAAAATCTCCGAAGCT+GGG | 0.505786 | 5.3:-60345693 | None:intergenic |
CACTGATGGACAGGCTAGAA+GGG | 0.507526 | 5.3:+60347639 | MS.gene58803:intron |
GATGATGGTGGTAGTGGTGA+TGG | 0.509548 | 5.3:+60346691 | MS.gene58803:CDS |
GACCCCTTCTGGCTCGAACA+TGG | 0.511902 | 5.3:-60346816 | None:intergenic |
GGGTTTGTGCAGAATGATGA+TGG | 0.512242 | 5.3:+60346676 | MS.gene58803:intron |
TCAGGTTATTGGAAAAGCAT+TGG | 0.514448 | 5.3:+60347938 | MS.gene58803:intron |
CAGAATGATGATGGTGGTAG+TGG | 0.528680 | 5.3:+60346685 | MS.gene58803:intron |
CTTGTAGCTTGTGAAGTGAA+TGG | 0.532061 | 5.3:-60348583 | None:intergenic |
CATCCATGTTCGAGCCAGAA+GGG | 0.533625 | 5.3:+60346813 | MS.gene58803:CDS |
AAGACCAACTCCTGGTATTG+AGG | 0.535318 | 5.3:+60348136 | MS.gene58803:CDS |
AAGACATCGGGGAACAGTAA+AGG | 0.547759 | 5.3:+60346724 | MS.gene58803:CDS |
AGAGGAAACGCCTCAATACC+AGG | 0.549144 | 5.3:-60348146 | None:intergenic |
TGCGTTTCAACCGGCAATGG+TGG | 0.550896 | 5.3:+60345795 | MS.gene58803:CDS |
AAATGCGTTTCAACCGGCAA+TGG | 0.555059 | 5.3:+60345792 | MS.gene58803:CDS |
TATAATTGATTATCTCATCA+AGG | 0.561459 | 5.3:-60347962 | None:intergenic |
GGATCCAGCGTATCATCTCC+CGG | 0.570528 | 5.3:+60345638 | MS.gene58803:CDS |
ACCATACCTTGTTGCAACCA+GGG | 0.571972 | 5.3:-60347702 | None:intergenic |
GAAGGGAAAAGATTAGTGAA+AGG | 0.577890 | 5.3:+60347656 | MS.gene58803:CDS |
TCAGTACTGAGATCTTCCAT+TGG | 0.581952 | 5.3:-60345711 | None:intergenic |
TAATTCACACCTCTACTTGG+TGG | 0.582744 | 5.3:-60347998 | None:intergenic |
AACGCCTCAATACCAGGAGT+TGG | 0.584696 | 5.3:-60348140 | None:intergenic |
ACATCCATGTTCGAGCCAGA+AGG | 0.584719 | 5.3:+60346812 | MS.gene58803:CDS |
CCACGTTGTTGGAATTGCCA+CGG | 0.590128 | 5.3:-60345821 | None:intergenic |
GTAAATTCAAGACCAACTCC+TGG | 0.595020 | 5.3:+60348128 | MS.gene58803:CDS |
ATCCATGTTCGAGCCAGAAG+GGG | 0.611344 | 5.3:+60346814 | MS.gene58803:CDS |
AGCTGCATATGTAACCACTC+TGG | 0.617342 | 5.3:-60348628 | None:intergenic |
TTGGAAAATCTCCGAAGCTG+GGG | 0.627605 | 5.3:-60345692 | None:intergenic |
TTTAGTCCCTGGTTGCAACA+AGG | 0.628236 | 5.3:+60347696 | MS.gene58803:CDS |
ATCTCCGGGAGATGATACGC+TGG | 0.632287 | 5.3:-60345642 | None:intergenic |
ATCACTTCACCACCAAGTAG+AGG | 0.638957 | 5.3:+60347989 | MS.gene58803:CDS |
TTGTGAAGTGAATGGTATGG+TGG | 0.648457 | 5.3:-60348575 | None:intergenic |
GAAAAGTAGAATAGAGACGA+AGG | 0.649676 | 5.3:+60345758 | MS.gene58803:CDS |
GAGTGGTTACATATGCAGCT+GGG | 0.656275 | 5.3:+60348631 | MS.gene58803:CDS |
ACCACTCTGGTGATGCACCT+CGG | 0.668855 | 5.3:-60348615 | None:intergenic |
GCTACAAGAGAGTACAGCCG+AGG | 0.682744 | 5.3:+60348598 | MS.gene58803:CDS |
AGCTTGTGAAGTGAATGGTA+TGG | 0.687656 | 5.3:-60348578 | None:intergenic |
AAACAGTTCAGGAAAGCATG+CGG | 0.691753 | 5.3:+60346753 | MS.gene58803:CDS |
CCGAAGCTGGGGCTAAACTG+CGG | 0.692738 | 5.3:-60345681 | None:intergenic |
GCCGAGGTGCATCACCAGAG+TGG | 0.699435 | 5.3:+60348614 | MS.gene58803:CDS |
TGGTTACATATGCAGCTGGG+AGG | 0.711832 | 5.3:+60348634 | MS.gene58803:CDS |
CCGTGGCAATTCCAACAACG+TGG | 0.733634 | 5.3:+60345821 | MS.gene58803:CDS |
TTTGTGCAGAATGATGATGG+TGG | 0.743796 | 5.3:+60346679 | MS.gene58803:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAACCTATATAAATTT+AGG | - | chr5.3:60347195-60347214 | None:intergenic | 10.0% |
!!! | ACATTAAATTTTTAGAAAAA+AGG | - | chr5.3:60348039-60348058 | None:intergenic | 10.0% |
!!! | CAACTTTTTAATATTTAATA+TGG | - | chr5.3:60346291-60346310 | None:intergenic | 10.0% |
!!! | GCTTTATTTTATTTTTATTA+TGG | + | chr5.3:60346371-60346390 | MS.gene58803:intron | 10.0% |
!! | AAACATAATAAATCTATTTG+AGG | + | chr5.3:60348372-60348391 | MS.gene58803:intron | 15.0% |
!! | AACAATTCCTAAATTTATAT+AGG | + | chr5.3:60347185-60347204 | MS.gene58803:intron | 15.0% |
!!! | TTTATTTGAGTTTTTTTTAC+CGG | + | chr5.3:60346033-60346052 | MS.gene58803:intron | 15.0% |
!! | ACGAAGGAAAAAATATATAT+TGG | + | chr5.3:60345904-60345923 | MS.gene58803:intron | 20.0% |
!! | AGTTATACACATAAAAAATG+CGG | - | chr5.3:60347764-60347783 | None:intergenic | 20.0% |
!! | CGAAGGAAAAAATATATATT+GGG | + | chr5.3:60345905-60345924 | MS.gene58803:intron | 20.0% |
!! | TATAATTGATTATCTCATCA+AGG | - | chr5.3:60347965-60347984 | None:intergenic | 20.0% |
!! | TTATGTTATCTTAATTACGA+AGG | + | chr5.3:60345888-60345907 | MS.gene58803:intron | 20.0% |
!! | TTATTCTATATAATGTCCTT+TGG | + | chr5.3:60348247-60348266 | MS.gene58803:intron | 20.0% |
!!! | AATAAAGCTATTTTCATGTA+AGG | - | chr5.3:60346359-60346378 | None:intergenic | 20.0% |
!!! | AGAGTTTTTAAAACAACTTA+CGG | + | chr5.3:60346082-60346101 | MS.gene58803:intron | 20.0% |
!!! | AGTAAATTGTGTTTCTATTT+GGG | - | chr5.3:60347132-60347151 | None:intergenic | 20.0% |
!!! | ATGAATTTAGTTCTACTAAT+TGG | + | chr5.3:60345929-60345948 | MS.gene58803:intron | 20.0% |
!!! | GATTTGTTTTTAATGTATTC+AGG | + | chr5.3:60347920-60347939 | MS.gene58803:intron | 20.0% |
!!! | TAAATACTTACAGTTTTAAG+AGG | - | chr5.3:60348167-60348186 | None:intergenic | 20.0% |
!!! | TAGTAAATTGTGTTTCTATT+TGG | - | chr5.3:60347133-60347152 | None:intergenic | 20.0% |
!!! | TATTACTTTTTTTGACAACT+TGG | + | chr5.3:60346990-60347009 | MS.gene58803:intron | 20.0% |
!!! | TCACAAAGTGTATTTTTATA+TGG | + | chr5.3:60346893-60346912 | MS.gene58803:intron | 20.0% |
!!! | TTAATGGTTGTTTTAGTTTT+AGG | + | chr5.3:60347389-60347408 | MS.gene58803:intron | 20.0% |
!!! | TTTAGTCCTCAAATTTTTAA+CGG | - | chr5.3:60348402-60348421 | None:intergenic | 20.0% |
!!! | TTTTAATGTATTCAGGTTAT+TGG | + | chr5.3:60347927-60347946 | MS.gene58803:intron | 20.0% |
! | AAAAAGATAGCATAATTGAG+TGG | - | chr5.3:60345854-60345873 | None:intergenic | 25.0% |
! | AAAAGATAGCATAATTGAGT+GGG | - | chr5.3:60345853-60345872 | None:intergenic | 25.0% |
! | AAATGAAACTGTTACGTAAA+TGG | + | chr5.3:60347544-60347563 | MS.gene58803:intron | 25.0% |
! | AATAAGTTGTTTATCCAAAC+AGG | - | chr5.3:60346108-60346127 | None:intergenic | 25.0% |
! | AATGAAACTGTTACGTAAAT+GGG | + | chr5.3:60347545-60347564 | MS.gene58803:intron | 25.0% |
! | ATAAAATAGTAATCCGCAAT+AGG | - | chr5.3:60346598-60346617 | None:intergenic | 25.0% |
! | GAAGATAGATTTAGCTAAAA+AGG | - | chr5.3:60348501-60348520 | None:intergenic | 25.0% |
! | GCACTTTAAACTCTTTAATT+TGG | - | chr5.3:60348465-60348484 | None:intergenic | 25.0% |
! | TAAAAACAAATCAAGCCATA+AGG | - | chr5.3:60347912-60347931 | None:intergenic | 25.0% |
! | TGCAATTTCGTATTACAATA+TGG | + | chr5.3:60346560-60346579 | MS.gene58803:intron | 25.0% |
! | TGTATTAACCAAGTAGTTAA+AGG | + | chr5.3:60345977-60345996 | MS.gene58803:intron | 25.0% |
! | TTTATGAGACTAAGAAGATT+AGG | + | chr5.3:60347278-60347297 | MS.gene58803:intron | 25.0% |
!! | ATATTTAATATGGGCTTGTT+TGG | - | chr5.3:60346281-60346300 | None:intergenic | 25.0% |
!! | ATGCTATATATTCTAGAAGT+TGG | + | chr5.3:60348213-60348232 | MS.gene58803:intron | 25.0% |
!! | TATTTTGCAATCAGTGTTAT+TGG | + | chr5.3:60347589-60347608 | MS.gene58803:intron | 25.0% |
!! | TTCTTATATTTAAGACCAGA+GGG | - | chr5.3:60347073-60347092 | None:intergenic | 25.0% |
!!! | GTTGTTTTTGTAAGCTATAT+TGG | + | chr5.3:60346197-60346216 | MS.gene58803:intron | 25.0% |
!!! | TAAACTCTTTAATTTGGACT+AGG | - | chr5.3:60348459-60348478 | None:intergenic | 25.0% |
!!! | TTTAGGAATTGTTTTTGAGA+AGG | - | chr5.3:60347178-60347197 | None:intergenic | 25.0% |
AAAAAAGCTTCTAACCAAAC+TGG | - | chr5.3:60348311-60348330 | None:intergenic | 30.0% | |
AAACTCTAAATTACCAAGGT+CGG | + | chr5.3:60346499-60346518 | MS.gene58803:intron | 30.0% | |
AGTCAAACTCTAAATTACCA+AGG | + | chr5.3:60346495-60346514 | MS.gene58803:intron | 30.0% | |
ATTCTCATAAGTCTTTAAGC+CGG | - | chr5.3:60346055-60346074 | None:intergenic | 30.0% | |
CAAGTTTCATGTTCTTAACT+GGG | + | chr5.3:60347434-60347453 | MS.gene58803:intron | 30.0% | |
CTTTGTGAGAATTAGAAAGT+AGG | - | chr5.3:60346881-60346900 | None:intergenic | 30.0% | |
GATTAAGATGTTTATCCAAG+TGG | + | chr5.3:60346432-60346451 | MS.gene58803:intron | 30.0% | |
GCATTCAACGTAAAAGAATT+AGG | - | chr5.3:60348197-60348216 | None:intergenic | 30.0% | |
TAACCAAGTAGTTAAAGGTT+AGG | + | chr5.3:60345982-60346001 | MS.gene58803:intron | 30.0% | |
TACTCATTAAAACTTCCACT+TGG | - | chr5.3:60346450-60346469 | None:intergenic | 30.0% | |
TCGTATTACAATATGGAGAA+TGG | + | chr5.3:60346567-60346586 | MS.gene58803:intron | 30.0% | |
TGAATATTGATGAACACTGA+TGG | + | chr5.3:60347625-60347644 | MS.gene58803:intron | 30.0% | |
TGAGCTGAAAATATTCCTTA+TGG | + | chr5.3:60347894-60347913 | MS.gene58803:intron | 30.0% | |
TTAGATAATGTTGATCCTGA+AGG | + | chr5.3:60346933-60346952 | MS.gene58803:intron | 30.0% | |
TTGGTCACTCAATGATTATT+GGG | - | chr5.3:60348429-60348448 | None:intergenic | 30.0% | |
TTTGGTCACTCAATGATTAT+TGG | - | chr5.3:60348430-60348449 | None:intergenic | 30.0% | |
! | AATTGTCAGAAGTTGTTTCA+TGG | + | chr5.3:60346232-60346251 | MS.gene58803:intron | 30.0% |
! | CTTCTTATATTTAAGACCAG+AGG | - | chr5.3:60347074-60347093 | None:intergenic | 30.0% |
! | GGTTTTCCGTTAAAAATTTG+AGG | + | chr5.3:60348393-60348412 | MS.gene58803:intron | 30.0% |
! | TGGAATTCAAGCATTGTTAT+TGG | + | chr5.3:60346635-60346654 | MS.gene58803:intron | 30.0% |
! | TGGTAATTTAGAGTTTGACT+AGG | - | chr5.3:60346495-60346514 | None:intergenic | 30.0% |
!! | GGGAGGTAATATTGATTTAT+TGG | + | chr5.3:60347565-60347584 | MS.gene58803:intron | 30.0% |
!!! | GCAACTTGTTTTTGTATATG+TGG | + | chr5.3:60346171-60346190 | MS.gene58803:intron | 30.0% |
AAAGGAGAAGAAAACAGTTC+AGG | + | chr5.3:60346742-60346761 | MS.gene58803:CDS | 35.0% | |
AAGGTTAGGTTCAACTCTTA+AGG | + | chr5.3:60345996-60346015 | MS.gene58803:intron | 35.0% | |
ACATGGATGTAGTCTTTCTT+AGG | - | chr5.3:60346802-60346821 | None:intergenic | 35.0% | |
AGATAATTCACACCTCTACT+TGG | - | chr5.3:60348004-60348023 | None:intergenic | 35.0% | |
AGTTATACTCATCTCACCAA+AGG | - | chr5.3:60348266-60348285 | None:intergenic | 35.0% | |
ATACTCTTTCTGCAAGACTA+TGG | - | chr5.3:60346855-60346874 | None:intergenic | 35.0% | |
ATGTAGTCTTTCTTAGGATG+TGG | - | chr5.3:60346796-60346815 | None:intergenic | 35.0% | |
CATTAAGCAAAACCACCATT+CGG | - | chr5.3:60347375-60347394 | None:intergenic | 35.0% | |
CGGTCTCGATTATAAACAAA+AGG | - | chr5.3:60347355-60347374 | None:intergenic | 35.0% | |
CTGGGATAATTGTAATACTG+AGG | + | chr5.3:60347452-60347471 | MS.gene58803:intron | 35.0% | |
GAAAAGTAGAATAGAGACGA+AGG | + | chr5.3:60345758-60345777 | MS.gene58803:CDS | 35.0% | |
GAACCTAACCTTTAACTACT+TGG | - | chr5.3:60345988-60346007 | None:intergenic | 35.0% | |
GAAGGGAAAAGATTAGTGAA+AGG | + | chr5.3:60347656-60347675 | MS.gene58803:CDS | 35.0% | |
GCAAGTTTCATGTTCTTAAC+TGG | + | chr5.3:60347433-60347452 | MS.gene58803:intron | 35.0% | |
GGTATCCTTGCGATAAAAAA+GGG | - | chr5.3:60348290-60348309 | None:intergenic | 35.0% | |
TCAGTTAAATGCGTTTCAAC+CGG | + | chr5.3:60345786-60345805 | MS.gene58803:CDS | 35.0% | |
TGAAAGGATGAAAACTCTTC+AGG | + | chr5.3:60347672-60347691 | MS.gene58803:CDS | 35.0% | |
TGGAAAAAGGAGTAAGACAT+CGG | + | chr5.3:60346711-60346730 | MS.gene58803:CDS | 35.0% | |
TGGTATCCTTGCGATAAAAA+AGG | - | chr5.3:60348291-60348310 | None:intergenic | 35.0% | |
TGTTTATAATCGAGACCGAA+TGG | + | chr5.3:60347357-60347376 | MS.gene58803:intron | 35.0% | |
TTTCAAAAGTAAACCGACCT+TGG | - | chr5.3:60346515-60346534 | None:intergenic | 35.0% | |
TTTGACAACTTGGAATCAGT+AGG | + | chr5.3:60347000-60347019 | MS.gene58803:intron | 35.0% | |
! | AAGCATTGTTATTGGAGTAG+AGG | + | chr5.3:60346643-60346662 | MS.gene58803:intron | 35.0% |
! | CATATGTTTGCTGATCAAAC+TGG | - | chr5.3:60348549-60348568 | None:intergenic | 35.0% |
! | TCAGGTTATTGGAAAAGCAT+TGG | + | chr5.3:60347938-60347957 | MS.gene58803:intron | 35.0% |
!! | ATTTGGACTAGGTCTGATTT+TGG | - | chr5.3:60348448-60348467 | None:intergenic | 35.0% |
!! | TCGTCTCTATTCTACTTTTC+CGG | - | chr5.3:60345758-60345777 | None:intergenic | 35.0% |
AAAACAACTTACGGCCTGTT+TGG | + | chr5.3:60346091-60346110 | MS.gene58803:intron | 40.0% | |
ACCAAATTCTATACTCCCTC+TGG | + | chr5.3:60347055-60347074 | MS.gene58803:intron | 40.0% | |
AGCTTGTGAAGTGAATGGTA+TGG | - | chr5.3:60348581-60348600 | None:intergenic | 40.0% | |
ATTGGAAAATCTCCGAAGCT+GGG | - | chr5.3:60345696-60345715 | None:intergenic | 40.0% | |
GAAAAAGGAGTAAGACATCG+GGG | + | chr5.3:60346713-60346732 | MS.gene58803:CDS | 40.0% | |
GAAACTGTTACGTAAATGGG+AGG | + | chr5.3:60347548-60347567 | MS.gene58803:intron | 40.0% | |
GAACAAAAACCACTGAACCA+TGG | + | chr5.3:60345732-60345751 | MS.gene58803:CDS | 40.0% | |
GATTAGTAGATAGTAGCAGC+AGG | + | chr5.3:60348345-60348364 | MS.gene58803:intron | 40.0% | |
GGAAAAAGGAGTAAGACATC+GGG | + | chr5.3:60346712-60346731 | MS.gene58803:CDS | 40.0% | |
GGAGTAGAGGTAGTGAATTT+GGG | + | chr5.3:60346656-60346675 | MS.gene58803:intron | 40.0% | |
GTAAATTCAAGACCAACTCC+TGG | + | chr5.3:60348128-60348147 | MS.gene58803:CDS | 40.0% | |
GTTCAACTCTTAAGGTGTGT+TGG | + | chr5.3:60346004-60346023 | MS.gene58803:intron | 40.0% | |
TAATTCACACCTCTACTTGG+TGG | - | chr5.3:60348001-60348020 | None:intergenic | 40.0% | |
TCAAGCAAGCAATATCCTTC+AGG | - | chr5.3:60346951-60346970 | None:intergenic | 40.0% | |
TGGAGTAGAGGTAGTGAATT+TGG | + | chr5.3:60346655-60346674 | MS.gene58803:intron | 40.0% | |
TTATAATCGAGACCGAATGG+TGG | + | chr5.3:60347360-60347379 | MS.gene58803:intron | 40.0% | |
TTATCGCAAGGATACCAGTT+TGG | + | chr5.3:60348294-60348313 | MS.gene58803:intron | 40.0% | |
TTGTGAAGTGAATGGTATGG+TGG | - | chr5.3:60348578-60348597 | None:intergenic | 40.0% | |
! | AAACAGTTCAGGAAAGCATG+CGG | + | chr5.3:60346753-60346772 | MS.gene58803:CDS | 40.0% |
! | ACCAGAGGGAGTATAGAATT+TGG | - | chr5.3:60347059-60347078 | None:intergenic | 40.0% |
! | ATTGATGAACACTGATGGAC+AGG | + | chr5.3:60347630-60347649 | MS.gene58803:intron | 40.0% |
! | CTTGTAGCTTGTGAAGTGAA+TGG | - | chr5.3:60348586-60348605 | None:intergenic | 40.0% |
! | TCAGTACTGAGATCTTCCAT+TGG | - | chr5.3:60345714-60345733 | None:intergenic | 40.0% |
!! | CGAATGGTGGTTTTGCTTAA+TGG | + | chr5.3:60347373-60347392 | MS.gene58803:intron | 40.0% |
!! | TTTGTGCAGAATGATGATGG+TGG | + | chr5.3:60346679-60346698 | MS.gene58803:intron | 40.0% |
!!! | AACTGCCCTTTTTTATCGCA+AGG | + | chr5.3:60348282-60348301 | MS.gene58803:intron | 40.0% |
AAAAACCACTGAACCATGGC+CGG | + | chr5.3:60345736-60345755 | MS.gene58803:CDS | 45.0% | |
AAATGCGTTTCAACCGGCAA+TGG | + | chr5.3:60345792-60345811 | MS.gene58803:CDS | 45.0% | |
AACCATACCTTGTTGCAACC+AGG | - | chr5.3:60347706-60347725 | None:intergenic | 45.0% | |
AAGACATCGGGGAACAGTAA+AGG | + | chr5.3:60346724-60346743 | MS.gene58803:CDS | 45.0% | |
AAGACCAACTCCTGGTATTG+AGG | + | chr5.3:60348136-60348155 | MS.gene58803:CDS | 45.0% | |
ACCATACCTTGTTGCAACCA+GGG | - | chr5.3:60347705-60347724 | None:intergenic | 45.0% | |
ACTCTTCAGGATTTAGTCCC+TGG | + | chr5.3:60347685-60347704 | MS.gene58803:CDS | 45.0% | |
AGAGTGGTTACATATGCAGC+TGG | + | chr5.3:60348630-60348649 | MS.gene58803:CDS | 45.0% | |
AGCTGCATATGTAACCACTC+TGG | - | chr5.3:60348631-60348650 | None:intergenic | 45.0% | |
AGTAGATAGTAGCAGCAGGT+AGG | + | chr5.3:60348349-60348368 | MS.gene58803:intron | 45.0% | |
ATCACTTCACCACCAAGTAG+AGG | + | chr5.3:60347989-60348008 | MS.gene58803:CDS | 45.0% | |
CATTGGAAAATCTCCGAAGC+TGG | - | chr5.3:60345697-60345716 | None:intergenic | 45.0% | |
GAGAATGGATCTGCCTATTG+CGG | + | chr5.3:60346582-60346601 | MS.gene58803:intron | 45.0% | |
GAGTGGTTACATATGCAGCT+GGG | + | chr5.3:60348631-60348650 | MS.gene58803:CDS | 45.0% | |
GGGTTTGTGCAGAATGATGA+TGG | + | chr5.3:60346676-60346695 | MS.gene58803:intron | 45.0% | |
TTGGAAAATCTCCGAAGCTG+GGG | - | chr5.3:60345695-60345714 | None:intergenic | 45.0% | |
TTTAGTCCCTGGTTGCAACA+AGG | + | chr5.3:60347696-60347715 | MS.gene58803:CDS | 45.0% | |
! | CAGCTTCGGAGATTTTCCAA+TGG | + | chr5.3:60345695-60345714 | MS.gene58803:CDS | 45.0% |
!! | CAGAATGATGATGGTGGTAG+TGG | + | chr5.3:60346685-60346704 | MS.gene58803:intron | 45.0% |
!! | CTACTTGGTGGTGAAGTGAT+TGG | - | chr5.3:60347989-60348008 | None:intergenic | 45.0% |
!! | CTATTCTACTTTTCCGGCCA+TGG | - | chr5.3:60345752-60345771 | None:intergenic | 45.0% |
!! | GTGGTAGTGGTGATGGAAAA+AGG | + | chr5.3:60346698-60346717 | MS.gene58803:CDS | 45.0% |
!!! | AACTTTTTAATATTTAATAT+GGG | - | chr5.3:60346290-60346309 | None:intergenic | 5.0% |
!!! | TATTTTTATTTTTTTTTTGT+TGG | + | chr5.3:60346615-60346634 | MS.gene58803:intron | 5.0% |
AACGCCTCAATACCAGGAGT+TGG | - | chr5.3:60348143-60348162 | None:intergenic | 50.0% | |
ACATCCATGTTCGAGCCAGA+AGG | + | chr5.3:60346812-60346831 | MS.gene58803:CDS | 50.0% | |
AGAGGAAACGCCTCAATACC+AGG | - | chr5.3:60348149-60348168 | None:intergenic | 50.0% | |
ATCAGTAGCTTGACCCCTTC+TGG | - | chr5.3:60346830-60346849 | None:intergenic | 50.0% | |
ATCCATGTTCGAGCCAGAAG+GGG | + | chr5.3:60346814-60346833 | MS.gene58803:CDS | 50.0% | |
CATCCATGTTCGAGCCAGAA+GGG | + | chr5.3:60346813-60346832 | MS.gene58803:CDS | 50.0% | |
CCACGTTGTTGGAATTGCCA+CGG | - | chr5.3:60345824-60345843 | None:intergenic | 50.0% | |
GTGGGCAATTACCACGTTGT+TGG | - | chr5.3:60345835-60345854 | None:intergenic | 50.0% | |
TCCCTGGTTGCAACAAGGTA+TGG | + | chr5.3:60347701-60347720 | MS.gene58803:intron | 50.0% | |
TGGTTACATATGCAGCTGGG+AGG | + | chr5.3:60348634-60348653 | MS.gene58803:CDS | 50.0% | |
TTACATATGCAGCTGGGAGG+TGG | + | chr5.3:60348637-60348656 | MS.gene58803:CDS | 50.0% | |
! | ACACTGATGGACAGGCTAGA+AGG | + | chr5.3:60347638-60347657 | MS.gene58803:intron | 50.0% |
! | CACTGATGGACAGGCTAGAA+GGG | + | chr5.3:60347639-60347658 | MS.gene58803:intron | 50.0% |
!! | GATGATGGTGGTAGTGGTGA+TGG | + | chr5.3:60346691-60346710 | MS.gene58803:CDS | 50.0% |
ATCTCCGGGAGATGATACGC+TGG | - | chr5.3:60345645-60345664 | None:intergenic | 55.0% | |
CCGTGGCAATTCCAACAACG+TGG | + | chr5.3:60345821-60345840 | MS.gene58803:CDS | 55.0% | |
CGTATCATCTCCCGGAGATC+TGG | + | chr5.3:60345646-60345665 | MS.gene58803:CDS | 55.0% | |
CTTCTGGACTGCCAGATCTC+CGG | - | chr5.3:60345660-60345679 | None:intergenic | 55.0% | |
GGATCCAGCGTATCATCTCC+CGG | + | chr5.3:60345638-60345657 | MS.gene58803:CDS | 55.0% | |
GTTTCAACCGGCAATGGTGG+TGG | + | chr5.3:60345798-60345817 | MS.gene58803:CDS | 55.0% | |
TGCGTTTCAACCGGCAATGG+TGG | + | chr5.3:60345795-60345814 | MS.gene58803:CDS | 55.0% | |
TTCTGGACTGCCAGATCTCC+GGG | - | chr5.3:60345659-60345678 | None:intergenic | 55.0% | |
! | ACCACTCTGGTGATGCACCT+CGG | - | chr5.3:60348618-60348637 | None:intergenic | 55.0% |
! | CTGAGGCTGACACACTGACT+CGG | + | chr5.3:60347469-60347488 | MS.gene58803:intron | 55.0% |
! | CTTTTCCGGCCATGGTTCAG+TGG | - | chr5.3:60345744-60345763 | None:intergenic | 55.0% |
! | GCTACAAGAGAGTACAGCCG+AGG | + | chr5.3:60348598-60348617 | MS.gene58803:CDS | 55.0% |
!! | CTGACACACTGACTCGGCTA+TGG | + | chr5.3:60347475-60347494 | MS.gene58803:intron | 55.0% |
CCGAAGCTGGGGCTAAACTG+CGG | - | chr5.3:60345684-60345703 | None:intergenic | 60.0% | |
CCGCAGTTTAGCCCCAGCTT+CGG | + | chr5.3:60345681-60345700 | MS.gene58803:CDS | 60.0% | |
GGGGCTAAACTGCGGTCTTC+TGG | - | chr5.3:60345676-60345695 | None:intergenic | 60.0% | |
!! | GACCCCTTCTGGCTCGAACA+TGG | - | chr5.3:60346819-60346838 | None:intergenic | 60.0% |
GCCGAGGTGCATCACCAGAG+TGG | + | chr5.3:60348614-60348633 | MS.gene58803:CDS | 65.0% | |
GCCACGGCCACCACCATTGC+CGG | - | chr5.3:60345808-60345827 | None:intergenic | 70.0% | |
!! | ACCGGCAATGGTGGTGGCCG+TGG | + | chr5.3:60345804-60345823 | MS.gene58803:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.3 | gene | 60345636 | 60348678 | 60345636 | ID=MS.gene58803 |
chr5.3 | mRNA | 60345636 | 60348678 | 60345636 | ID=MS.gene58803.t1;Parent=MS.gene58803 |
chr5.3 | exon | 60345636 | 60345842 | 60345636 | ID=MS.gene58803.t1.exon1;Parent=MS.gene58803.t1 |
chr5.3 | CDS | 60345636 | 60345842 | 60345636 | ID=cds.MS.gene58803.t1;Parent=MS.gene58803.t1 |
chr5.3 | exon | 60346688 | 60346870 | 60346688 | ID=MS.gene58803.t1.exon2;Parent=MS.gene58803.t1 |
chr5.3 | CDS | 60346688 | 60346870 | 60346688 | ID=cds.MS.gene58803.t1;Parent=MS.gene58803.t1 |
chr5.3 | exon | 60347652 | 60347717 | 60347652 | ID=MS.gene58803.t1.exon3;Parent=MS.gene58803.t1 |
chr5.3 | CDS | 60347652 | 60347717 | 60347652 | ID=cds.MS.gene58803.t1;Parent=MS.gene58803.t1 |
chr5.3 | exon | 60347942 | 60348010 | 60347942 | ID=MS.gene58803.t1.exon4;Parent=MS.gene58803.t1 |
chr5.3 | CDS | 60347942 | 60348010 | 60347942 | ID=cds.MS.gene58803.t1;Parent=MS.gene58803.t1 |
chr5.3 | exon | 60348104 | 60348175 | 60348104 | ID=MS.gene58803.t1.exon5;Parent=MS.gene58803.t1 |
chr5.3 | CDS | 60348104 | 60348175 | 60348104 | ID=cds.MS.gene58803.t1;Parent=MS.gene58803.t1 |
chr5.3 | exon | 60348550 | 60348678 | 60348550 | ID=MS.gene58803.t1.exon6;Parent=MS.gene58803.t1 |
chr5.3 | CDS | 60348550 | 60348678 | 60348550 | ID=cds.MS.gene58803.t1;Parent=MS.gene58803.t1 |
Gene Sequence |
Protein sequence |