Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59115.t1 | KEH28285.1 | 84.7 | 300 | 38 | 1 | 302 | 593 | 239 | 538 | 1.90E-137 | 500 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59115.t1 | Q8GT74 | 63.6 | 118 | 43 | 0 | 595 | 712 | 91 | 208 | 4.0e-35 | 151.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59115.t1 | A0A072UR00 | 84.7 | 300 | 38 | 1 | 302 | 593 | 239 | 538 | 1.4e-137 | 500.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59115.t1 | MTR_5g082700 | 84.667 | 300 | 38 | 1 | 302 | 593 | 239 | 538 | 1.47e-163 | 485 |
| MS.gene59115.t1 | MTR_5g082700 | 84.667 | 300 | 38 | 1 | 302 | 593 | 239 | 538 | 1.50e-162 | 485 |
| MS.gene59115.t1 | MTR_5g082700 | 84.667 | 300 | 38 | 1 | 302 | 593 | 239 | 538 | 1.91e-162 | 486 |
| MS.gene59115.t1 | MTR_8g074900 | 78.151 | 119 | 19 | 1 | 594 | 712 | 81 | 192 | 4.16e-59 | 199 |
| MS.gene59115.t1 | MTR_8g069620 | 58.861 | 158 | 57 | 1 | 436 | 585 | 14 | 171 | 2.58e-50 | 175 |
| MS.gene59115.t1 | MTR_6g074905 | 53.714 | 175 | 37 | 2 | 427 | 593 | 859 | 997 | 1.68e-47 | 182 |
| MS.gene59115.t1 | MTR_5g022920 | 65.833 | 120 | 40 | 1 | 593 | 712 | 83 | 201 | 8.74e-43 | 155 |
| MS.gene59115.t1 | MTR_6g074870 | 44.186 | 215 | 59 | 5 | 387 | 593 | 67 | 228 | 5.44e-39 | 148 |
| MS.gene59115.t1 | MTR_2g020520 | 68.807 | 109 | 33 | 1 | 18 | 125 | 15 | 123 | 3.73e-36 | 142 |
| MS.gene59115.t1 | MTR_2g020520 | 69.159 | 107 | 32 | 1 | 20 | 125 | 18 | 124 | 5.20e-36 | 141 |
| MS.gene59115.t1 | MTR_6g074640 | 50.000 | 148 | 36 | 2 | 446 | 593 | 11 | 120 | 1.37e-33 | 129 |
| MS.gene59115.t1 | MTR_0349s0030 | 79.688 | 64 | 13 | 0 | 530 | 593 | 54 | 117 | 1.81e-26 | 110 |
| MS.gene59115.t1 | MTR_8g070930 | 38.378 | 185 | 95 | 5 | 424 | 593 | 91 | 271 | 1.63e-24 | 110 |
| MS.gene59115.t1 | MTR_3g013490 | 70.833 | 72 | 21 | 0 | 89 | 160 | 195 | 266 | 1.21e-18 | 91.7 |
| MS.gene59115.t1 | MTR_1g111180 | 33.562 | 146 | 80 | 4 | 461 | 593 | 671 | 812 | 1.28e-12 | 72.0 |
| MS.gene59115.t1 | MTR_1g111180 | 33.562 | 146 | 80 | 4 | 461 | 593 | 670 | 811 | 1.29e-12 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59115.t1 | AT2G40120 | 72.941 | 170 | 38 | 1 | 432 | 593 | 227 | 396 | 4.02e-77 | 259 |
| MS.gene59115.t1 | AT1G73460 | 59.276 | 221 | 68 | 5 | 427 | 635 | 819 | 1029 | 1.00e-70 | 251 |
| MS.gene59115.t1 | AT1G73460 | 59.276 | 221 | 68 | 5 | 427 | 635 | 819 | 1029 | 1.00e-70 | 251 |
| MS.gene59115.t1 | AT1G73450 | 59.276 | 221 | 68 | 5 | 427 | 635 | 802 | 1012 | 1.33e-70 | 251 |
| MS.gene59115.t1 | AT3G17750 | 64.571 | 175 | 54 | 1 | 427 | 593 | 788 | 962 | 1.37e-66 | 239 |
| MS.gene59115.t1 | AT2G17730 | 62.500 | 120 | 45 | 0 | 593 | 712 | 89 | 208 | 1.83e-41 | 152 |
| MS.gene59115.t1 | AT2G17730 | 62.500 | 120 | 45 | 0 | 593 | 712 | 89 | 208 | 3.47e-41 | 151 |
| MS.gene59115.t1 | AT4G35840 | 62.500 | 120 | 45 | 0 | 593 | 712 | 84 | 203 | 7.79e-41 | 150 |
| MS.gene59115.t1 | AT5G66070 | 60.504 | 119 | 42 | 1 | 594 | 712 | 75 | 188 | 6.51e-40 | 147 |
| MS.gene59115.t1 | AT5G66070 | 60.504 | 119 | 42 | 1 | 594 | 712 | 75 | 188 | 6.51e-40 | 147 |
| MS.gene59115.t1 | AT4G35840 | 60.870 | 115 | 45 | 0 | 593 | 707 | 84 | 198 | 4.79e-36 | 137 |
| MS.gene59115.t1 | AT5G66070 | 58.929 | 112 | 41 | 1 | 594 | 705 | 75 | 181 | 1.94e-35 | 133 |
| MS.gene59115.t1 | AT5G66070 | 50.000 | 144 | 43 | 2 | 593 | 712 | 74 | 212 | 1.52e-32 | 126 |
| MS.gene59115.t1 | AT5G66070 | 48.529 | 136 | 41 | 2 | 594 | 705 | 75 | 205 | 2.20e-30 | 119 |
| MS.gene59115.t1 | AT5G35980 | 37.569 | 181 | 94 | 5 | 442 | 607 | 92 | 268 | 2.75e-23 | 106 |
| MS.gene59115.t1 | AT5G35980 | 38.506 | 174 | 88 | 5 | 442 | 600 | 92 | 261 | 2.86e-23 | 105 |
| MS.gene59115.t1 | AT5G35980 | 37.569 | 181 | 94 | 5 | 442 | 607 | 57 | 233 | 3.34e-23 | 105 |
| MS.gene59115.t1 | AT1G13350 | 33.945 | 109 | 69 | 1 | 485 | 593 | 473 | 578 | 7.84e-11 | 66.2 |
| MS.gene59115.t1 | AT1G13350 | 33.945 | 109 | 69 | 1 | 485 | 593 | 500 | 605 | 8.55e-11 | 65.9 |
| MS.gene59115.t1 | AT1G13350 | 33.945 | 109 | 69 | 1 | 485 | 593 | 546 | 651 | 8.71e-11 | 65.9 |
Find 146 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTAGCTACCTTAATTTAA+AGG | 0.143063 | 1.4:-16019151 | MS.gene59115:CDS |
| GGATCCTTGATTCATCTTTC+TGG | 0.165412 | 1.4:-16019528 | MS.gene59115:CDS |
| TTAACATAATCAATTGTCTT+AGG | 0.186245 | 1.4:+16019882 | None:intergenic |
| CTTTGGCATTCGAATAATTC+TGG | 0.197162 | 1.4:-16018328 | MS.gene59115:CDS |
| CAAGCTCCACCTAGACCTTT+AGG | 0.219512 | 1.4:-16020056 | MS.gene59115:CDS |
| CATAAATTCAACCAAGAATA+TGG | 0.227119 | 1.4:-16018505 | MS.gene59115:CDS |
| GCTTAATTTCCTTTAAATTA+AGG | 0.237843 | 1.4:+16019142 | None:intergenic |
| AAGCTCCACCTAGACCTTTA+GGG | 0.263196 | 1.4:-16020055 | MS.gene59115:CDS |
| ATGCTTCACCACCATATTCT+TGG | 0.272074 | 1.4:+16018494 | None:intergenic |
| TTAAGGTAGCTAATGTTTAT+AGG | 0.288253 | 1.4:+16019159 | None:intergenic |
| ACAGAAAAGCAAGCACTTAA+TGG | 0.303631 | 1.4:-16017809 | MS.gene59115:intron |
| TTCCTGTTCAATTTGCCTTC+AGG | 0.305106 | 1.4:-16018053 | MS.gene59115:CDS |
| TTGTATGTTCTATTGATCTT+TGG | 0.316674 | 1.4:-16018345 | MS.gene59115:CDS |
| CATTACTCGACAGTGTTTAG+AGG | 0.319594 | 1.4:-16018446 | MS.gene59115:CDS |
| CATTCGAATAATTCTGGAAT+AGG | 0.333342 | 1.4:-16018322 | MS.gene59115:CDS |
| CACTTGTGATTGAGACTATT+GGG | 0.340792 | 1.4:+16018107 | None:intergenic |
| CACCGCTGGTGGAATGGTTC+TGG | 0.344551 | 1.4:-16020024 | MS.gene59115:CDS |
| TAGCTTCGATCCGGAGGTTT+GGG | 0.350467 | 1.4:+16019417 | None:intergenic |
| CCACCTAGACCTTTAGGGTT+TGG | 0.362434 | 1.4:-16020050 | MS.gene59115:CDS |
| ATGCGCAATGGCTTCTTTCT+CGG | 0.367067 | 1.4:+16019242 | None:intergenic |
| TCACTTGTGATTGAGACTAT+TGG | 0.368196 | 1.4:+16018106 | None:intergenic |
| ATAGCTTCGATCCGGAGGTT+TGG | 0.378202 | 1.4:+16019416 | None:intergenic |
| TTCTAACAGTCTCTCCCATT+TGG | 0.383802 | 1.4:+16018026 | None:intergenic |
| ATGACTGAATGTTCTTCAAC+TGG | 0.393738 | 1.4:+16020179 | None:intergenic |
| CGAACCTGTTGTTATTATTG+AGG | 0.398188 | 1.4:-16020156 | MS.gene59115:CDS |
| CACACCGTATTTAGCACTTC+AGG | 0.399063 | 1.4:-16019574 | MS.gene59115:CDS |
| GCAATCTGAACTATGCTTCA+TGG | 0.399375 | 1.4:+16019059 | None:intergenic |
| AGACAGAATTATGAGGCTTC+AGG | 0.401315 | 1.4:+16018383 | None:intergenic |
| ATCACTGATATCATTACTTT+CGG | 0.403949 | 1.4:+16019827 | None:intergenic |
| TAACATAATCAATTGTCTTA+GGG | 0.407009 | 1.4:+16019883 | None:intergenic |
| ATTGCAATATTTACATAACT+TGG | 0.409904 | 1.4:-16018422 | MS.gene59115:CDS |
| TAAGAAGCTTGATTTCATCT+AGG | 0.411237 | 1.4:+16018650 | None:intergenic |
| TGCCTTCAGGATTTCCAAAT+GGG | 0.419108 | 1.4:-16018040 | MS.gene59115:CDS |
| GAGTGAAGAACTCCATGTTC+CGG | 0.421411 | 1.4:-16018944 | MS.gene59115:CDS |
| CGATCCGGAGGTTTGGGTAG+TGG | 0.425881 | 1.4:+16019423 | None:intergenic |
| TTTCAACATATCTTTGACAT+TGG | 0.427382 | 1.4:-16018169 | MS.gene59115:CDS |
| ACTCTCAAAGTTTCTCTAAA+GGG | 0.428966 | 1.4:-16019998 | MS.gene59115:CDS |
| GTTCAGCAGGTTCTTGTAGT+GGG | 0.431132 | 1.4:-16019185 | MS.gene59115:CDS |
| ATCCTGAAGGCAAATTGAAC+AGG | 0.433788 | 1.4:+16018051 | None:intergenic |
| GGATGTGACAGAGGCTTACT+AGG | 0.444182 | 1.4:-16018148 | MS.gene59115:CDS |
| GGCTTCTTTCTCGGCACTGA+GGG | 0.450284 | 1.4:+16019251 | None:intergenic |
| TCTGGTGGTGCAGGAAGTGG+TGG | 0.450710 | 1.4:+16019345 | None:intergenic |
| AGGGTCTGATTTAAGAAGGC+TGG | 0.452779 | 1.4:+16019902 | None:intergenic |
| GAGCTTGAAGTGAAATATCT+AGG | 0.452943 | 1.4:+16020072 | None:intergenic |
| TATTTCAACAAACATGTAAT+GGG | 0.455848 | 1.4:+16019275 | None:intergenic |
| GTCTCCTCAATAATAACAAC+AGG | 0.458553 | 1.4:+16020152 | None:intergenic |
| CATACATGAGTTAGTAAAGA+TGG | 0.460709 | 1.4:-16019766 | MS.gene59115:CDS |
| TTATGACTATTTCTACCATC+AGG | 0.460782 | 1.4:-16018578 | MS.gene59115:CDS |
| TCTCCATCTGTGGCAGCCTC+CGG | 0.462617 | 1.4:+16018925 | None:intergenic |
| TTGCCTTCAGGATTTCCAAA+TGG | 0.467728 | 1.4:-16018041 | MS.gene59115:CDS |
| CTACAAGAACCTGCTGAACC+TGG | 0.473048 | 1.4:+16019189 | None:intergenic |
| AACAAAGAAATATCAGATAG+TGG | 0.475294 | 1.4:-16020110 | MS.gene59115:CDS |
| GTGTCTGGTGGTGCAGGAAG+TGG | 0.476291 | 1.4:+16019342 | None:intergenic |
| TCTTAGGGTCTGATTTAAGA+AGG | 0.478323 | 1.4:+16019898 | None:intergenic |
| TTGGGTAGTGGCGGCAGAGT+CGG | 0.481200 | 1.4:+16019435 | None:intergenic |
| TAAGTTTGCACGCAGAAGTT+CGG | 0.485105 | 1.4:+16018537 | None:intergenic |
| TGGCAACACCGCTGGTGGAA+TGG | 0.491231 | 1.4:-16020030 | MS.gene59115:CDS |
| GTCAATTTGACGAGCTGCAA+AGG | 0.493930 | 1.4:-16019549 | MS.gene59115:CDS |
| TGATATTTCTTTGTTTAGCA+CGG | 0.494833 | 1.4:+16020118 | None:intergenic |
| AAAAGCAGTCCAGGTTCAGC+AGG | 0.497375 | 1.4:-16019198 | MS.gene59115:CDS |
| TTGCCAAACCCTAAAGGTCT+AGG | 0.500192 | 1.4:+16020047 | None:intergenic |
| CTGTGGCAGCCTCCGGAACA+TGG | 0.502526 | 1.4:+16018932 | None:intergenic |
| GGTTCAGCAGGTTCTTGTAG+TGG | 0.505056 | 1.4:-16019186 | MS.gene59115:CDS |
| TTGCAATATTTACATAACTT+GGG | 0.506178 | 1.4:-16018421 | MS.gene59115:CDS |
| AGTATGTGGCGTTTATCTCC+CGG | 0.506715 | 1.4:+16018607 | None:intergenic |
| TGAACTTTCTATTGCAGCAT+CGG | 0.506969 | 1.4:-16019799 | MS.gene59115:CDS |
| TTAGGGTTTGGCAACACCGC+TGG | 0.507478 | 1.4:-16020038 | MS.gene59115:CDS |
| GTTCCGGAGGCTGCCACAGA+TGG | 0.508408 | 1.4:-16018928 | MS.gene59115:CDS |
| ATCTTCTGATAGCTTCGATC+CGG | 0.508560 | 1.4:+16019408 | None:intergenic |
| ATAGAGAAGACAGAATTATG+AGG | 0.508809 | 1.4:+16018376 | None:intergenic |
| CACTCTCAAAGTTTCTCTAA+AGG | 0.509641 | 1.4:-16019999 | MS.gene59115:CDS |
| GTATTTCAACAAACATGTAA+TGG | 0.512226 | 1.4:+16019274 | None:intergenic |
| CCATTGCTTTCAATCCCATT+CGG | 0.516665 | 1.4:+16018988 | None:intergenic |
| ACCAGACACCGAAAATAGAT+TGG | 0.519369 | 1.4:-16019328 | MS.gene59115:CDS |
| GGAGTTCTTCACTCAAATAT+CGG | 0.520249 | 1.4:+16018953 | None:intergenic |
| GGCTCAGGTGTATTCTATAA+CGG | 0.521269 | 1.4:-16019615 | MS.gene59115:CDS |
| ATCTGTTTCAACAACTTCGA+TGG | 0.530198 | 1.4:+16019014 | None:intergenic |
| CATACCAGAAAGATGAATCA+AGG | 0.532240 | 1.4:+16019524 | None:intergenic |
| TTGAAACAGATCTACCGAAT+GGG | 0.535513 | 1.4:-16019002 | MS.gene59115:CDS |
| ACCACCTGAAGTGCTAAATA+CGG | 0.536060 | 1.4:+16019570 | None:intergenic |
| TAAAGGAAATTAAGCTGAGT+CGG | 0.536864 | 1.4:-16019134 | MS.gene59115:CDS |
| GGTGGTGCAGGAAGTGGTGG+AGG | 0.539230 | 1.4:+16019348 | None:intergenic |
| TCGGTTCAGCTACCTTCAGT+AGG | 0.540246 | 1.4:-16018732 | MS.gene59115:CDS |
| TTCTGATAGCTTCGATCCGG+AGG | 0.545370 | 1.4:+16019411 | None:intergenic |
| GATTGTGCTGAACACGGTCA+TGG | 0.546919 | 1.4:-16018782 | MS.gene59115:CDS |
| TATCAGATAGTGGAGCTAAC+GGG | 0.549949 | 1.4:-16020100 | MS.gene59115:CDS |
| GTGCATGGAAAGAATAGGAC+TGG | 0.553009 | 1.4:-16018829 | MS.gene59115:CDS |
| ATATCAGATAGTGGAGCTAA+CGG | 0.555900 | 1.4:-16020101 | MS.gene59115:CDS |
| GCCGCCACTACCCAAACCTC+CGG | 0.562559 | 1.4:-16019427 | MS.gene59115:CDS |
| GGGTTTGGCAACACCGCTGG+TGG | 0.563437 | 1.4:-16020035 | MS.gene59115:CDS |
| AACTTCAGAATTATGCGCAA+TGG | 0.563755 | 1.4:+16019230 | None:intergenic |
| GTATGTGGCGTTTATCTCCC+GGG | 0.564712 | 1.4:+16018608 | None:intergenic |
| TTCAGCAGGTTCTTGTAGTG+GGG | 0.568017 | 1.4:-16019184 | MS.gene59115:CDS |
| GCGGTGTTGCCAAACCCTAA+AGG | 0.568245 | 1.4:+16020041 | None:intergenic |
| CTCTCAAAGTTTCTCTAAAG+GGG | 0.571073 | 1.4:-16019997 | MS.gene59115:CDS |
| GTACAAGTCTCCCACTCACT+AGG | 0.571667 | 1.4:+16018266 | None:intergenic |
| AGTCATAAAGACGCAGTATG+TGG | 0.573921 | 1.4:+16018593 | None:intergenic |
| TGCAGGAAGTGGTGGAGGCA+AGG | 0.579538 | 1.4:+16019353 | None:intergenic |
| CTCCCATTTGGAAATCCTGA+AGG | 0.579740 | 1.4:+16018038 | None:intergenic |
| GAATTGTGCATGGAAAGAAT+AGG | 0.580039 | 1.4:-16018834 | MS.gene59115:CDS |
| TTCAGTAGGGATGCTCTCGA+TGG | 0.583985 | 1.4:-16018718 | MS.gene59115:CDS |
| CGGTTCAGCTACCTTCAGTA+GGG | 0.590898 | 1.4:-16018731 | MS.gene59115:CDS |
| CTTTAGAGAAACTTTGAGAG+TGG | 0.596298 | 1.4:+16020000 | None:intergenic |
| GTTCAAAGTCAGATGGGTGC+AGG | 0.598923 | 1.4:-16018211 | MS.gene59115:CDS |
| AAAAGCAAGCACTTAATGGA+TGG | 0.599900 | 1.4:-16017805 | MS.gene59115:CDS |
| CAATGAATAAATGTTCCTGA+TGG | 0.601057 | 1.4:+16018563 | None:intergenic |
| GAATGCTGTTCAAAGTCAGA+TGG | 0.601226 | 1.4:-16018218 | MS.gene59115:CDS |
| GGGATTGAAAGCAATGGAGT+AGG | 0.601533 | 1.4:-16018982 | MS.gene59115:CDS |
| TTATTACTAGCCTAGTGAGT+GGG | 0.602053 | 1.4:-16018276 | MS.gene59115:CDS |
| ATAAAAGTGAATGTAGCAGA+TGG | 0.603482 | 1.4:-16019933 | MS.gene59115:CDS |
| TGTGAATGTTTCGATAGTAG+TGG | 0.604151 | 1.4:+16019474 | None:intergenic |
| GGTGAAATTCATCACAACAT+CGG | 0.604562 | 1.4:-16019307 | MS.gene59115:CDS |
| TCCGGAGGTTTGGGTAGTGG+CGG | 0.605445 | 1.4:+16019426 | None:intergenic |
| GTTGAAACAGATCTACCGAA+TGG | 0.607989 | 1.4:-16019003 | MS.gene59115:CDS |
| CCGAATGGGATTGAAAGCAA+TGG | 0.608264 | 1.4:-16018988 | MS.gene59115:CDS |
| TTTGACATTGGATGTGACAG+AGG | 0.609823 | 1.4:-16018157 | MS.gene59115:CDS |
| TTTGAGCTAAGAATTGTGCA+TGG | 0.611242 | 1.4:-16018844 | MS.gene59115:CDS |
| GACTGGATTTGAAGAAAACA+AGG | 0.612197 | 1.4:-16018812 | MS.gene59115:CDS |
| TGGCTTCTTTCTCGGCACTG+AGG | 0.612609 | 1.4:+16019250 | None:intergenic |
| ATCGAGAGCATCCCTACTGA+AGG | 0.612994 | 1.4:+16018720 | None:intergenic |
| GCATAGTTCAGATTGCTACA+AGG | 0.615746 | 1.4:-16019052 | MS.gene59115:CDS |
| TACTATGTGACAGATTATCT+CGG | 0.618368 | 1.4:-16018751 | MS.gene59115:CDS |
| ATTATTATCCTCTCCATCTG+TGG | 0.619270 | 1.4:+16018915 | None:intergenic |
| TGAACACGGTCATGGCTGAA+AGG | 0.620232 | 1.4:-16018774 | MS.gene59115:CDS |
| ACTTTCTATTGCAGCATCGG+AGG | 0.622968 | 1.4:-16019796 | MS.gene59115:CDS |
| CTTGTCGATAAGCACGACCC+GGG | 0.628203 | 1.4:-16018625 | MS.gene59115:CDS |
| GAGCCATGACACAAAAGAGT+AGG | 0.631491 | 1.4:+16019633 | None:intergenic |
| GTCCAGAACCATTCCACCAG+CGG | 0.631736 | 1.4:+16020022 | None:intergenic |
| TCTCAAAGTTTCTCTAAAGG+GGG | 0.641090 | 1.4:-16019996 | MS.gene59115:CDS |
| TGAGTTAGTAAAGATGGAGT+CGG | 0.643279 | 1.4:-16019760 | MS.gene59115:CDS |
| ACTTTGAACAGCATTCAACA+TGG | 0.643300 | 1.4:+16018225 | None:intergenic |
| GGAGGCTGCCACAGATGGAG+AGG | 0.645603 | 1.4:-16018923 | MS.gene59115:CDS |
| AAGCTATCAGAAGATTCTCG+TGG | 0.653064 | 1.4:-16019400 | MS.gene59115:CDS |
| ATTATTACTAGCCTAGTGAG+TGG | 0.653310 | 1.4:-16018277 | MS.gene59115:CDS |
| TGAAGAACTCCATGTTCCGG+AGG | 0.656619 | 1.4:-16018941 | MS.gene59115:CDS |
| AATGCTGTTCAAAGTCAGAT+GGG | 0.656650 | 1.4:-16018217 | MS.gene59115:CDS |
| ACTTGTCGATAAGCACGACC+CGG | 0.656700 | 1.4:-16018626 | MS.gene59115:CDS |
| GCTTCTTTCTCGGCACTGAG+GGG | 0.663612 | 1.4:+16019252 | None:intergenic |
| CCAAACCCTAAAGGTCTAGG+TGG | 0.663816 | 1.4:+16020050 | None:intergenic |
| AAATTCAACCAAGAATATGG+TGG | 0.668921 | 1.4:-16018502 | MS.gene59115:CDS |
| ACCGTATTTAGCACTTCAGG+TGG | 0.670753 | 1.4:-16019571 | MS.gene59115:CDS |
| AGACTTGTACGTGAAAGAGT+TGG | 0.691935 | 1.4:-16018253 | MS.gene59115:CDS |
| AATGGATGGCAACAACACAA+AGG | 0.695166 | 1.4:-16017791 | MS.gene59115:CDS |
| CAGATAGTGGAGCTAACGGG+AGG | 0.697790 | 1.4:-16020097 | MS.gene59115:CDS |
| AGTGCTGATTGTGCTGAACA+CGG | 0.717577 | 1.4:-16018788 | MS.gene59115:CDS |
| AGAGTCGGAGTGAAAACACG+TGG | 0.744559 | 1.4:+16019450 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGCAATATTTACATAACT+TGG | - | chr1.4:16019543-16019562 | MS.gene59115:CDS | 20.0% |
| !! | GAAGATTATTAAAAATGACA+AGG | - | chr1.4:16019276-16019295 | MS.gene59115:CDS | 20.0% |
| !! | GCTTAATTTCCTTTAAATTA+AGG | + | chr1.4:16018826-16018845 | None:intergenic | 20.0% |
| !! | TAACATAATCAATTGTCTTA+GGG | + | chr1.4:16018085-16018104 | None:intergenic | 20.0% |
| !! | TATTTCAACAAACATGTAAT+GGG | + | chr1.4:16018693-16018712 | None:intergenic | 20.0% |
| !! | TTAACATAATCAATTGTCTT+AGG | + | chr1.4:16018086-16018105 | None:intergenic | 20.0% |
| !! | TTGCAATATTTACATAACTT+GGG | - | chr1.4:16019544-16019563 | MS.gene59115:CDS | 20.0% |
| !!! | AAGATTAATGTTTTTTGCAA+TGG | - | chr1.4:16020072-16020091 | MS.gene59115:CDS | 20.0% |
| ! | AACAAAGAAATATCAGATAG+TGG | - | chr1.4:16017855-16017874 | MS.gene59115:intron | 25.0% |
| ! | ACAACAGAAAGAAAAATCAA+AGG | - | chr1.4:16018106-16018125 | MS.gene59115:CDS | 25.0% |
| ! | ATCACTGATATCATTACTTT+CGG | + | chr1.4:16018141-16018160 | None:intergenic | 25.0% |
| ! | CATAAATTCAACCAAGAATA+TGG | - | chr1.4:16019460-16019479 | MS.gene59115:CDS | 25.0% |
| ! | CATTAGCTACCTTAATTTAA+AGG | - | chr1.4:16018814-16018833 | MS.gene59115:CDS | 25.0% |
| ! | GTATTTCAACAAACATGTAA+TGG | + | chr1.4:16018694-16018713 | None:intergenic | 25.0% |
| ! | GTTAAACGTATGATGATAAT+GGG | + | chr1.4:16019971-16019990 | None:intergenic | 25.0% |
| ! | TTAAGGTAGCTAATGTTTAT+AGG | + | chr1.4:16018809-16018828 | None:intergenic | 25.0% |
| ! | TTGTATGTTCTATTGATCTT+TGG | - | chr1.4:16019620-16019639 | MS.gene59115:CDS | 25.0% |
| ! | TTTCAACATATCTTTGACAT+TGG | - | chr1.4:16019796-16019815 | MS.gene59115:CDS | 25.0% |
| !! | GAATTTCACCAATCTATTTT+CGG | + | chr1.4:16018648-16018667 | None:intergenic | 25.0% |
| !! | TGATATTTCTTTGTTTAGCA+CGG | + | chr1.4:16017850-16017869 | None:intergenic | 25.0% |
| !! | TTAAACGTATGATGATAATG+GGG | + | chr1.4:16019970-16019989 | None:intergenic | 25.0% |
| !!! | TCTGATGAATCTTTAGTTTT+TGG | + | chr1.4:16018269-16018288 | None:intergenic | 25.0% |
| AAATTCAACCAAGAATATGG+TGG | - | chr1.4:16019463-16019482 | MS.gene59115:CDS | 30.0% | |
| ACTCTCAAAGTTTCTCTAAA+GGG | - | chr1.4:16017967-16017986 | MS.gene59115:intron | 30.0% | |
| ATAAAAGTGAATGTAGCAGA+TGG | - | chr1.4:16018032-16018051 | MS.gene59115:intron | 30.0% | |
| ATAGAGAAGACAGAATTATG+AGG | + | chr1.4:16019592-16019611 | None:intergenic | 30.0% | |
| ATTAAAGTGTACTCAAGTGA+AGG | - | chr1.4:16018296-16018315 | MS.gene59115:CDS | 30.0% | |
| CAATGAATAAATGTTCCTGA+TGG | + | chr1.4:16019405-16019424 | None:intergenic | 30.0% | |
| CATACATGAGTTAGTAAAGA+TGG | - | chr1.4:16018199-16018218 | MS.gene59115:CDS | 30.0% | |
| GGTTAAACGTATGATGATAA+TGG | + | chr1.4:16019972-16019991 | None:intergenic | 30.0% | |
| TAAAGGAAATTAAGCTGAGT+CGG | - | chr1.4:16018831-16018850 | MS.gene59115:CDS | 30.0% | |
| TAAGAAGCTTGATTTCATCT+AGG | + | chr1.4:16019318-16019337 | None:intergenic | 30.0% | |
| TACTATGTGACAGATTATCT+CGG | - | chr1.4:16019214-16019233 | MS.gene59115:CDS | 30.0% | |
| TTAAAGTGTACTCAAGTGAA+GGG | - | chr1.4:16018297-16018316 | MS.gene59115:CDS | 30.0% | |
| ! | CGGAATGATTTTCATATGAA+GGG | - | chr1.4:16018851-16018870 | MS.gene59115:CDS | 30.0% |
| ! | TCGGAATGATTTTCATATGA+AGG | - | chr1.4:16018850-16018869 | MS.gene59115:CDS | 30.0% |
| !! | CATCTTGACTGTATTTTAAG+AGG | + | chr1.4:16019087-16019106 | None:intergenic | 30.0% |
| !! | CATTCGAATAATTCTGGAAT+AGG | - | chr1.4:16019643-16019662 | MS.gene59115:intron | 30.0% |
| !! | TTATGACTATTTCTACCATC+AGG | - | chr1.4:16019387-16019406 | MS.gene59115:CDS | 30.0% |
| AAAAGCAAGCACTTAATGGA+TGG | - | chr1.4:16020160-16020179 | MS.gene59115:CDS | 35.0% | |
| AACTTCAGAATTATGCGCAA+TGG | + | chr1.4:16018738-16018757 | None:intergenic | 35.0% | |
| AATGCTGTTCAAAGTCAGAT+GGG | - | chr1.4:16019748-16019767 | MS.gene59115:CDS | 35.0% | |
| ACAGAAAAGCAAGCACTTAA+TGG | - | chr1.4:16020156-16020175 | MS.gene59115:CDS | 35.0% | |
| ACTTTGAACAGCATTCAACA+TGG | + | chr1.4:16019743-16019762 | None:intergenic | 35.0% | |
| ATCTGTTTCAACAACTTCGA+TGG | + | chr1.4:16018954-16018973 | None:intergenic | 35.0% | |
| ATGACTGAATGTTCTTCAAC+TGG | + | chr1.4:16017789-16017808 | None:intergenic | 35.0% | |
| ATTATTATCCTCTCCATCTG+TGG | + | chr1.4:16019053-16019072 | None:intergenic | 35.0% | |
| CACTCTCAAAGTTTCTCTAA+AGG | - | chr1.4:16017966-16017985 | MS.gene59115:intron | 35.0% | |
| CACTTGTGATTGAGACTATT+GGG | + | chr1.4:16019861-16019880 | None:intergenic | 35.0% | |
| CATACCAGAAAGATGAATCA+AGG | + | chr1.4:16018444-16018463 | None:intergenic | 35.0% | |
| CTTTGGCATTCGAATAATTC+TGG | - | chr1.4:16019637-16019656 | MS.gene59115:intron | 35.0% | |
| GAATTGTGCATGGAAAGAAT+AGG | - | chr1.4:16019131-16019150 | MS.gene59115:CDS | 35.0% | |
| GACTGGATTTGAAGAAAACA+AGG | - | chr1.4:16019153-16019172 | MS.gene59115:CDS | 35.0% | |
| GAGCTTGAAGTGAAATATCT+AGG | + | chr1.4:16017896-16017915 | None:intergenic | 35.0% | |
| GGAGTTCTTCACTCAAATAT+CGG | + | chr1.4:16019015-16019034 | None:intergenic | 35.0% | |
| GGTGAAATTCATCACAACAT+CGG | - | chr1.4:16018658-16018677 | MS.gene59115:CDS | 35.0% | |
| GTCTCCTCAATAATAACAAC+AGG | + | chr1.4:16017816-16017835 | None:intergenic | 35.0% | |
| TAAAGTGTACTCAAGTGAAG+GGG | - | chr1.4:16018298-16018317 | MS.gene59115:CDS | 35.0% | |
| TCACTTGTGATTGAGACTAT+TGG | + | chr1.4:16019862-16019881 | None:intergenic | 35.0% | |
| TCTTAGGGTCTGATTTAAGA+AGG | + | chr1.4:16018070-16018089 | None:intergenic | 35.0% | |
| TGAACTTTCTATTGCAGCAT+CGG | - | chr1.4:16018166-16018185 | MS.gene59115:CDS | 35.0% | |
| TGAGTTAGTAAAGATGGAGT+CGG | - | chr1.4:16018205-16018224 | MS.gene59115:CDS | 35.0% | |
| TGTGAATGTTTCGATAGTAG+TGG | + | chr1.4:16018494-16018513 | None:intergenic | 35.0% | |
| TTGAAACAGATCTACCGAAT+GGG | - | chr1.4:16018963-16018982 | MS.gene59115:CDS | 35.0% | |
| TTTGAGCTAAGAATTGTGCA+TGG | - | chr1.4:16019121-16019140 | MS.gene59115:CDS | 35.0% | |
| ! | ATTATTACTAGCCTAGTGAG+TGG | - | chr1.4:16019688-16019707 | MS.gene59115:intron | 35.0% |
| ! | CGAACCTGTTGTTATTATTG+AGG | - | chr1.4:16017809-16017828 | MS.gene59115:intron | 35.0% |
| ! | CTCTCAAAGTTTCTCTAAAG+GGG | - | chr1.4:16017968-16017987 | MS.gene59115:intron | 35.0% |
| ! | CTTTAGAGAAACTTTGAGAG+TGG | + | chr1.4:16017968-16017987 | None:intergenic | 35.0% |
| ! | TCTCAAAGTTTCTCTAAAGG+GGG | - | chr1.4:16017969-16017988 | MS.gene59115:intron | 35.0% |
| ! | TTATTACTAGCCTAGTGAGT+GGG | - | chr1.4:16019689-16019708 | MS.gene59115:intron | 35.0% |
| !! | ATATCAGATAGTGGAGCTAA+CGG | - | chr1.4:16017864-16017883 | MS.gene59115:intron | 35.0% |
| !! | GACAACAATTTTGATGCTTG+TGG | - | chr1.4:16019880-16019899 | MS.gene59115:CDS | 35.0% |
| AAGCTATCAGAAGATTCTCG+TGG | - | chr1.4:16018565-16018584 | MS.gene59115:CDS | 40.0% | |
| AATGGATGGCAACAACACAA+AGG | - | chr1.4:16020174-16020193 | MS.gene59115:CDS | 40.0% | |
| ACCAGACACCGAAAATAGAT+TGG | - | chr1.4:16018637-16018656 | MS.gene59115:CDS | 40.0% | |
| ACTTGCACACAACTAAGTGT+AGG | + | chr1.4:16020122-16020141 | None:intergenic | 40.0% | |
| AGACAGAATTATGAGGCTTC+AGG | + | chr1.4:16019585-16019604 | None:intergenic | 40.0% | |
| AGACTTGTACGTGAAAGAGT+TGG | - | chr1.4:16019712-16019731 | MS.gene59115:CDS | 40.0% | |
| AGTCATAAAGACGCAGTATG+TGG | + | chr1.4:16019375-16019394 | None:intergenic | 40.0% | |
| ATCCTGAAGGCAAATTGAAC+AGG | + | chr1.4:16019917-16019936 | None:intergenic | 40.0% | |
| ATCTTCTGATAGCTTCGATC+CGG | + | chr1.4:16018560-16018579 | None:intergenic | 40.0% | |
| ATGCTTCACCACCATATTCT+TGG | + | chr1.4:16019474-16019493 | None:intergenic | 40.0% | |
| CATTACTCGACAGTGTTTAG+AGG | - | chr1.4:16019519-16019538 | MS.gene59115:CDS | 40.0% | |
| CCATTGCTTTCAATCCCATT+CGG | + | chr1.4:16018980-16018999 | None:intergenic | 40.0% | |
| GAATGCTGTTCAAAGTCAGA+TGG | - | chr1.4:16019747-16019766 | MS.gene59115:CDS | 40.0% | |
| GCAATCTGAACTATGCTTCA+TGG | + | chr1.4:16018909-16018928 | None:intergenic | 40.0% | |
| GCATAGTTCAGATTGCTACA+AGG | - | chr1.4:16018913-16018932 | MS.gene59115:CDS | 40.0% | |
| GGATCCTTGATTCATCTTTC+TGG | - | chr1.4:16018437-16018456 | MS.gene59115:CDS | 40.0% | |
| GGCTCAGGTGTATTCTATAA+CGG | - | chr1.4:16018350-16018369 | MS.gene59115:CDS | 40.0% | |
| GTTGAAACAGATCTACCGAA+TGG | - | chr1.4:16018962-16018981 | MS.gene59115:CDS | 40.0% | |
| TAAGTTTGCACGCAGAAGTT+CGG | + | chr1.4:16019431-16019450 | None:intergenic | 40.0% | |
| TGCCTTCAGGATTTCCAAAT+GGG | - | chr1.4:16019925-16019944 | MS.gene59115:CDS | 40.0% | |
| TTCCTGTTCAATTTGCCTTC+AGG | - | chr1.4:16019912-16019931 | MS.gene59115:CDS | 40.0% | |
| TTCTAACAGTCTCTCCCATT+TGG | + | chr1.4:16019942-16019961 | None:intergenic | 40.0% | |
| TTGCCTTCAGGATTTCCAAA+TGG | - | chr1.4:16019924-16019943 | MS.gene59115:CDS | 40.0% | |
| TTTGACATTGGATGTGACAG+AGG | - | chr1.4:16019808-16019827 | MS.gene59115:CDS | 40.0% | |
| ! | AAAGCCTGCAAAAAGCCTTT+TGG | + | chr1.4:16018002-16018021 | None:intergenic | 40.0% |
| ! | ACCACCTGAAGTGCTAAATA+CGG | + | chr1.4:16018398-16018417 | None:intergenic | 40.0% |
| ! | ATCACCAAAAGGCTTTTTGC+AGG | - | chr1.4:16017995-16018014 | MS.gene59115:intron | 40.0% |
| ! | TAGCCTACTCTTTTGTGTCA+TGG | - | chr1.4:16018329-16018348 | MS.gene59115:CDS | 40.0% |
| ! | TGTGCAAGTGTGGTTTTTGT+GGG | - | chr1.4:16020133-16020152 | MS.gene59115:CDS | 40.0% |
| !! | TATCAGATAGTGGAGCTAAC+GGG | - | chr1.4:16017865-16017884 | MS.gene59115:intron | 40.0% |
| !!! | AATCTATTTTCGGTGTCTGG+TGG | + | chr1.4:16018638-16018657 | None:intergenic | 40.0% |
| !!! | ACCAATCTATTTTCGGTGTC+TGG | + | chr1.4:16018641-16018660 | None:intergenic | 40.0% |
| AAAGGGGGATCATCACCAAA+AGG | - | chr1.4:16017984-16018003 | MS.gene59115:intron | 45.0% | |
| AAGCTCCACCTAGACCTTTA+GGG | - | chr1.4:16017910-16017929 | MS.gene59115:intron | 45.0% | |
| ACCGTATTTAGCACTTCAGG+TGG | - | chr1.4:16018394-16018413 | MS.gene59115:CDS | 45.0% | |
| AGGGTCTGATTTAAGAAGGC+TGG | + | chr1.4:16018066-16018085 | None:intergenic | 45.0% | |
| AGTATGTGGCGTTTATCTCC+CGG | + | chr1.4:16019361-16019380 | None:intergenic | 45.0% | |
| ATGAGCCACTTGTCAATGCA+AGG | + | chr1.4:16019997-16020016 | None:intergenic | 45.0% | |
| ATGCGCAATGGCTTCTTTCT+CGG | + | chr1.4:16018726-16018745 | None:intergenic | 45.0% | |
| CACACAACTAAGTGTAGGCT+TGG | + | chr1.4:16020117-16020136 | None:intergenic | 45.0% | |
| CACACCGTATTTAGCACTTC+AGG | - | chr1.4:16018391-16018410 | MS.gene59115:CDS | 45.0% | |
| CACTTAGTTGTGTGCAAGTG+TGG | - | chr1.4:16020123-16020142 | MS.gene59115:CDS | 45.0% | |
| CCGAATGGGATTGAAAGCAA+TGG | - | chr1.4:16018977-16018996 | MS.gene59115:CDS | 45.0% | |
| CTCCCATTTGGAAATCCTGA+AGG | + | chr1.4:16019930-16019949 | None:intergenic | 45.0% | |
| GAGCCATGACACAAAAGAGT+AGG | + | chr1.4:16018335-16018354 | None:intergenic | 45.0% | |
| GAGTGAAGAACTCCATGTTC+CGG | - | chr1.4:16019021-16019040 | MS.gene59115:CDS | 45.0% | |
| GCTCACTGTCTCTGCATAAT+GGG | + | chr1.4:16020035-16020054 | None:intergenic | 45.0% | |
| GGGATTGAAAGCAATGGAGT+AGG | - | chr1.4:16018983-16019002 | MS.gene59115:CDS | 45.0% | |
| GTCAATTTGACGAGCTGCAA+AGG | - | chr1.4:16018416-16018435 | MS.gene59115:CDS | 45.0% | |
| GTGCATGGAAAGAATAGGAC+TGG | - | chr1.4:16019136-16019155 | MS.gene59115:CDS | 45.0% | |
| GTTCAGCAGGTTCTTGTAGT+GGG | - | chr1.4:16018780-16018799 | MS.gene59115:CDS | 45.0% | |
| TGCTCACTGTCTCTGCATAA+TGG | + | chr1.4:16020036-16020055 | None:intergenic | 45.0% | |
| TTCAGCAGGTTCTTGTAGTG+GGG | - | chr1.4:16018781-16018800 | MS.gene59115:CDS | 45.0% | |
| TTGCCAAACCCTAAAGGTCT+AGG | + | chr1.4:16017921-16017940 | None:intergenic | 45.0% | |
| ! | ACCTACCTTGCATTGACAAG+TGG | - | chr1.4:16019989-16020008 | MS.gene59115:CDS | 45.0% |
| ! | ACTCTTTTGTGTCATGGCTC+AGG | - | chr1.4:16018335-16018354 | MS.gene59115:CDS | 45.0% |
| ! | ACTTTCTATTGCAGCATCGG+AGG | - | chr1.4:16018169-16018188 | MS.gene59115:CDS | 45.0% |
| ! | CCATTTTGCAAAAGCAGTCC+AGG | - | chr1.4:16018758-16018777 | MS.gene59115:CDS | 45.0% |
| ! | GTGTGCAAGTGTGGTTTTTG+TGG | - | chr1.4:16020132-16020151 | MS.gene59115:CDS | 45.0% |
| !! | AGTGCTGATTGTGCTGAACA+CGG | - | chr1.4:16019177-16019196 | MS.gene59115:CDS | 45.0% |
| !! | CCTGGACTGCTTTTGCAAAA+TGG | + | chr1.4:16018761-16018780 | None:intergenic | 45.0% |
| AAAAGCAGTCCAGGTTCAGC+AGG | - | chr1.4:16018767-16018786 | MS.gene59115:CDS | 50.0% | |
| ACTTGTCGATAAGCACGACC+CGG | - | chr1.4:16019339-16019358 | MS.gene59115:CDS | 50.0% | |
| AGAGTCGGAGTGAAAACACG+TGG | + | chr1.4:16018518-16018537 | None:intergenic | 50.0% | |
| ATAGCTTCGATCCGGAGGTT+TGG | + | chr1.4:16018552-16018571 | None:intergenic | 50.0% | |
| CAAGCTCCACCTAGACCTTT+AGG | - | chr1.4:16017909-16017928 | MS.gene59115:intron | 50.0% | |
| CCAAACCCTAAAGGTCTAGG+TGG | + | chr1.4:16017918-16017937 | None:intergenic | 50.0% | |
| CGGTTCAGCTACCTTCAGTA+GGG | - | chr1.4:16019234-16019253 | MS.gene59115:CDS | 50.0% | |
| CTACAAGAACCTGCTGAACC+TGG | + | chr1.4:16018779-16018798 | None:intergenic | 50.0% | |
| GACAAGTGGCTCATCAAGCA+TGG | - | chr1.4:16020003-16020022 | MS.gene59115:CDS | 50.0% | |
| GATTGTGCTGAACACGGTCA+TGG | - | chr1.4:16019183-16019202 | MS.gene59115:CDS | 50.0% | |
| GCCACTTGTCAATGCAAGGT+AGG | + | chr1.4:16019993-16020012 | None:intergenic | 50.0% | |
| GGATGTGACAGAGGCTTACT+AGG | - | chr1.4:16019817-16019836 | MS.gene59115:CDS | 50.0% | |
| GGTTCAGCAGGTTCTTGTAG+TGG | - | chr1.4:16018779-16018798 | MS.gene59115:CDS | 50.0% | |
| GTACAAGTCTCCCACTCACT+AGG | + | chr1.4:16019702-16019721 | None:intergenic | 50.0% | |
| GTATGTGGCGTTTATCTCCC+GGG | + | chr1.4:16019360-16019379 | None:intergenic | 50.0% | |
| GTTCAAAGTCAGATGGGTGC+AGG | - | chr1.4:16019754-16019773 | MS.gene59115:CDS | 50.0% | |
| TAGCTTCGATCCGGAGGTTT+GGG | + | chr1.4:16018551-16018570 | None:intergenic | 50.0% | |
| TCGGTTCAGCTACCTTCAGT+AGG | - | chr1.4:16019233-16019252 | MS.gene59115:CDS | 50.0% | |
| TGAACACGGTCATGGCTGAA+AGG | - | chr1.4:16019191-16019210 | MS.gene59115:CDS | 50.0% | |
| TGAAGAACTCCATGTTCCGG+AGG | - | chr1.4:16019024-16019043 | MS.gene59115:CDS | 50.0% | |
| TTCAGTAGGGATGCTCTCGA+TGG | - | chr1.4:16019247-16019266 | MS.gene59115:CDS | 50.0% | |
| TTCTGATAGCTTCGATCCGG+AGG | + | chr1.4:16018557-16018576 | None:intergenic | 50.0% | |
| !! | ATCGAGAGCATCCCTACTGA+AGG | + | chr1.4:16019248-16019267 | None:intergenic | 50.0% |
| !! | CCACCTAGACCTTTAGGGTT+TGG | - | chr1.4:16017915-16017934 | MS.gene59115:intron | 50.0% |
| CTTGTCGATAAGCACGACCC+GGG | - | chr1.4:16019340-16019359 | MS.gene59115:CDS | 55.0% | |
| GTCCAGAACCATTCCACCAG+CGG | + | chr1.4:16017946-16017965 | None:intergenic | 55.0% | |
| TGGCTTCTTTCTCGGCACTG+AGG | + | chr1.4:16018718-16018737 | None:intergenic | 55.0% | |
| TTAGGGTTTGGCAACACCGC+TGG | - | chr1.4:16017927-16017946 | MS.gene59115:intron | 55.0% | |
| ! | GCTTCTTTCTCGGCACTGAG+GGG | + | chr1.4:16018716-16018735 | None:intergenic | 55.0% |
| ! | GGCTTCTTTCTCGGCACTGA+GGG | + | chr1.4:16018717-16018736 | None:intergenic | 55.0% |
| !! | CAGATAGTGGAGCTAACGGG+AGG | - | chr1.4:16017868-16017887 | MS.gene59115:intron | 55.0% |
| !! | GCGGTGTTGCCAAACCCTAA+AGG | + | chr1.4:16017927-16017946 | None:intergenic | 55.0% |
| !!! | TTTTCGGTGTCTGGTGGTGC+AGG | + | chr1.4:16018632-16018651 | None:intergenic | 55.0% |
| CACCGCTGGTGGAATGGTTC+TGG | - | chr1.4:16017941-16017960 | MS.gene59115:intron | 60.0% | |
| CGATCCGGAGGTTTGGGTAG+TGG | + | chr1.4:16018545-16018564 | None:intergenic | 60.0% | |
| TCTCCATCTGTGGCAGCCTC+CGG | + | chr1.4:16019043-16019062 | None:intergenic | 60.0% | |
| TGGCAACACCGCTGGTGGAA+TGG | - | chr1.4:16017935-16017954 | MS.gene59115:intron | 60.0% | |
| ! | GTGTCTGGTGGTGCAGGAAG+TGG | + | chr1.4:16018626-16018645 | None:intergenic | 60.0% |
| ! | TCCGGAGGTTTGGGTAGTGG+CGG | + | chr1.4:16018542-16018561 | None:intergenic | 60.0% |
| ! | TCTGGTGGTGCAGGAAGTGG+TGG | + | chr1.4:16018623-16018642 | None:intergenic | 60.0% |
| ! | TGCAGGAAGTGGTGGAGGCA+AGG | + | chr1.4:16018615-16018634 | None:intergenic | 60.0% |
| ! | TTGGGTAGTGGCGGCAGAGT+CGG | + | chr1.4:16018533-16018552 | None:intergenic | 60.0% |
| CTGTGGCAGCCTCCGGAACA+TGG | + | chr1.4:16019036-16019055 | None:intergenic | 65.0% | |
| GCCGCCACTACCCAAACCTC+CGG | - | chr1.4:16018538-16018557 | MS.gene59115:CDS | 65.0% | |
| GGAGGCTGCCACAGATGGAG+AGG | - | chr1.4:16019042-16019061 | MS.gene59115:CDS | 65.0% | |
| GGGTTTGGCAACACCGCTGG+TGG | - | chr1.4:16017930-16017949 | MS.gene59115:intron | 65.0% | |
| GGTGGTGCAGGAAGTGGTGG+AGG | + | chr1.4:16018620-16018639 | None:intergenic | 65.0% | |
| GTTCCGGAGGCTGCCACAGA+TGG | - | chr1.4:16019037-16019056 | MS.gene59115:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 16017780 | 16020207 | 16017780 | ID=MS.gene59115 |
| chr1.4 | mRNA | 16017780 | 16020207 | 16017780 | ID=MS.gene59115.t1;Parent=MS.gene59115 |
| chr1.4 | exon | 16019695 | 16020207 | 16019695 | ID=MS.gene59115.t1.exon1;Parent=MS.gene59115.t1 |
| chr1.4 | CDS | 16019695 | 16020207 | 16019695 | ID=cds.MS.gene59115.t1;Parent=MS.gene59115.t1 |
| chr1.4 | exon | 16018033 | 16019655 | 16018033 | ID=MS.gene59115.t1.exon2;Parent=MS.gene59115.t1 |
| chr1.4 | CDS | 16018033 | 16019655 | 16018033 | ID=cds.MS.gene59115.t1;Parent=MS.gene59115.t1 |
| chr1.4 | exon | 16017780 | 16017827 | 16017780 | ID=MS.gene59115.t1.exon3;Parent=MS.gene59115.t1 |
| chr1.4 | CDS | 16017780 | 16017827 | 16017780 | ID=cds.MS.gene59115.t1;Parent=MS.gene59115.t1 |
| Gene Sequence |
| Protein sequence |
