AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59339

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59339.t1 MTR_5g019650 89.593 221 15 2 1 214 1 220 9.31e-133 372
MS.gene59339.t1 MTR_5g019680 81.690 213 33 2 1 213 1 207 2.42e-114 325
MS.gene59339.t1 MTR_4g107650 42.336 137 64 3 34 155 67 203 1.83e-23 96.3
MS.gene59339.t1 MTR_6g007647 48.214 112 47 3 54 157 33 141 4.96e-22 90.9
MS.gene59339.t1 MTR_6g007647 48.214 112 47 3 54 157 67 175 6.35e-22 91.3
MS.gene59339.t1 MTR_3g086790 60.811 74 29 0 54 127 60 133 1.61e-21 90.5
MS.gene59339.t1 MTR_7g103340 35.465 172 93 3 48 205 57 224 1.89e-21 89.0
MS.gene59339.t1 MTR_1g061660 39.161 143 81 1 54 190 59 201 2.10e-21 88.6
MS.gene59339.t1 MTR_8g089895 52.475 101 39 1 54 145 54 154 3.36e-21 89.7
MS.gene59339.t1 MTR_6g011610 50.495 101 50 0 43 143 85 185 1.21e-20 87.8
MS.gene59339.t1 MTR_6g011610 50.495 101 50 0 43 143 66 166 1.26e-20 87.0
MS.gene59339.t1 MTR_8g468210 42.609 115 61 1 46 160 69 178 4.57e-20 86.3
MS.gene59339.t1 MTR_8g469430 48.598 107 48 2 54 153 89 195 6.78e-20 85.9
MS.gene59339.t1 MTR_5g039000 43.478 115 60 1 46 160 69 178 1.21e-19 85.1
MS.gene59339.t1 MTR_5g038280 59.155 71 29 0 54 124 87 157 1.82e-19 85.1
MS.gene59339.t1 MTR_3g092150 39.716 141 68 3 56 196 40 163 7.30e-19 82.4
MS.gene59339.t1 MTR_3g080100 47.368 95 50 0 51 145 17 111 1.21e-17 78.6
MS.gene59339.t1 MTR_8g026960 44.860 107 56 1 58 164 38 141 1.53e-17 78.6
MS.gene59339.t1 MTR_3g080100 47.368 95 50 0 51 145 56 150 1.77e-17 78.6
MS.gene59339.t1 MTR_7g010020 47.778 90 47 0 54 143 80 169 2.55e-15 73.2
MS.gene59339.t1 MTR_2g061030 35.616 146 88 2 34 173 180 325 4.42e-14 70.1
MS.gene59339.t1 MTR_4g100550 42.727 110 57 2 39 143 106 214 5.72e-14 69.3
MS.gene59339.t1 MTR_8g006705 45.263 95 47 1 54 143 146 240 1.92e-13 68.2
MS.gene59339.t1 MTR_4g084750 53.731 67 31 0 54 120 65 131 3.03e-13 66.2
MS.gene59339.t1 MTR_4g097600 45.263 95 47 1 54 143 127 221 4.44e-13 66.6
MS.gene59339.t1 MTR_1g054285 38.053 113 65 1 34 141 134 246 3.81e-12 64.3
MS.gene59339.t1 MTR_5g014890 45.263 95 47 1 54 143 123 217 5.55e-12 63.5
MS.gene59339.t1 MTR_7g093430 37.500 112 65 1 35 141 141 252 7.84e-12 63.5
MS.gene59339.t1 MTR_5g013010 43.158 95 49 1 54 143 136 230 9.70e-12 63.2
MS.gene59339.t1 MTR_1g017090 32.484 157 87 3 54 197 130 280 1.18e-11 62.8
MS.gene59339.t1 MTR_3g103590 43.836 73 41 0 52 124 143 215 4.59e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59339.t1 AT4G36740 53.555 211 91 6 7 214 10 216 1.31e-62 194
MS.gene59339.t1 AT4G36740 54.028 211 89 7 7 214 10 215 3.20e-62 193
MS.gene59339.t1 AT2G18550 47.556 225 101 8 1 214 1 219 1.08e-61 192
MS.gene59339.t1 AT5G66700 45.536 224 103 7 5 214 9 227 2.13e-44 148
MS.gene59339.t1 AT3G01470 37.500 152 85 2 2 143 13 164 5.86e-24 96.3
MS.gene59339.t1 AT1G69780 38.816 152 83 3 2 143 23 174 1.56e-22 93.2
MS.gene59339.t1 AT4G40060 57.317 82 35 0 43 124 48 129 1.17e-21 90.9
MS.gene59339.t1 AT1G26960 44.355 124 64 1 54 177 71 189 1.91e-21 89.4
MS.gene59339.t1 AT2G22430 64.789 71 25 0 54 124 62 132 2.27e-21 90.1
MS.gene59339.t1 AT5G03790 50.000 94 46 1 46 139 70 162 7.19e-21 87.4
MS.gene59339.t1 AT5G65310 65.152 66 23 0 54 119 54 119 1.35e-20 87.8
MS.gene59339.t1 AT5G65310 58.108 74 31 0 46 119 64 137 1.40e-20 88.2
MS.gene59339.t1 AT5G03790 48.936 94 47 1 46 139 70 162 2.11e-20 85.1
MS.gene59339.t1 AT2G46680 41.732 127 67 1 48 174 26 145 3.63e-20 85.9
MS.gene59339.t1 AT2G36610 46.296 108 50 2 46 145 63 170 1.55e-19 82.8
MS.gene59339.t1 AT2G46680 47.748 111 51 1 48 151 26 136 1.69e-19 84.3
MS.gene59339.t1 AT3G01220 50.000 86 43 0 39 124 72 157 1.16e-18 82.4
MS.gene59339.t1 AT5G53980 44.444 99 55 0 45 143 2 100 1.90e-18 79.0
MS.gene59339.t1 AT5G15150 53.750 80 37 0 41 120 102 181 2.15e-18 82.0
MS.gene59339.t1 AT3G61890 41.176 119 64 1 57 169 33 151 1.01e-17 79.0
MS.gene59339.t1 AT1G27045 42.735 117 54 2 52 155 66 182 5.86e-17 76.6
MS.gene59339.t1 AT1G27045 36.054 147 79 2 52 191 15 153 8.94e-17 75.1
MS.gene59339.t1 AT1G27045 36.054 147 79 2 52 191 23 161 9.89e-17 75.5
MS.gene59339.t1 AT1G27045 36.054 147 79 2 52 191 23 161 9.89e-17 75.5
MS.gene59339.t1 AT1G27045 57.353 68 29 0 52 119 66 133 2.01e-16 75.9
MS.gene59339.t1 AT2G22800 45.161 93 46 1 54 141 113 205 2.27e-13 67.8
MS.gene59339.t1 AT4G16780 40.741 108 54 2 41 143 121 223 6.79e-13 66.6
MS.gene59339.t1 AT4G37790 44.086 93 47 1 54 141 126 218 2.21e-12 65.1
MS.gene59339.t1 AT2G01430 37.008 127 65 2 54 179 139 251 4.01e-12 64.3
MS.gene59339.t1 AT4G17460 40.385 104 57 1 45 143 126 229 4.07e-12 64.3
MS.gene59339.t1 AT5G47370 37.931 116 67 1 33 143 109 224 1.06e-11 63.2
MS.gene59339.t1 AT5G06710 39.048 105 64 0 35 139 171 275 2.26e-11 62.4
MS.gene59339.t1 AT3G60390 38.889 108 61 1 41 143 149 256 2.51e-11 62.4

Find 43 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCTTGTTGAGGAATTATT+TGG 0.121044 5.4:-11983617 None:intergenic
TCCACCTAGCTCTTCGATTC+TGG 0.214518 5.4:-11983942 None:intergenic
TGATGAACAGATGAAAATTT+TGG 0.274813 5.4:+11983822 MS.gene59339:CDS
TAAGCATCATTTGGTCTTGA+TGG 0.320716 5.4:-11983563 None:intergenic
GAACCATACTGCAACTTGTC+TGG 0.324204 5.4:-11983920 None:intergenic
CTACGCTTGCGTCTTGGCTT+TGG 0.328958 5.4:-11983736 None:intergenic
TTGTAGTAACATGTTTCATT+AGG 0.345702 5.4:-11985088 None:intergenic
CTGCATGTTACCCTTTCAAT+TGG 0.385057 5.4:-11984959 None:intergenic
ATCCCAGACAAGTTGCAGTA+TGG 0.391231 5.4:+11983917 MS.gene59339:CDS
TTCTTACTACGCTTGCGTCT+TGG 0.426044 5.4:-11983742 None:intergenic
ACCTTGTTGAGGAATTATTT+GGG 0.434434 5.4:-11983616 None:intergenic
AGAGGTATACCTTGGTTTCA+AGG 0.439510 5.4:-11984038 None:intergenic
ACTGAGACATAAGCATCATT+TGG 0.463969 5.4:-11983572 None:intergenic
CGTAGTAAGAAGAACAAAAG+TGG 0.482800 5.4:+11983754 MS.gene59339:CDS
GATAGGCTTGCAATGGAGCT+TGG 0.487004 5.4:+11983889 MS.gene59339:CDS
AAGGAGATACTTCTCAAGAA+TGG 0.497377 5.4:-11984019 None:intergenic
TAAACTTGAGTCAGAGAAGA+AGG 0.499532 5.4:+11983867 MS.gene59339:CDS
GTCTCAGTCAGTGGAAGTTG+TGG 0.499926 5.4:+11985003 MS.gene59339:CDS
GGTGAATTTGGTGTTGATAA+CGG 0.514478 5.4:+11985040 MS.gene59339:CDS
ACACCAAATTCACCAAGAAA+AGG 0.517876 5.4:-11985031 None:intergenic
AACCATACTGCAACTTGTCT+GGG 0.517968 5.4:-11983919 None:intergenic
TTGAGTCAGAGAAGAAGGAT+AGG 0.537241 5.4:+11983872 MS.gene59339:CDS
ATTTGGGTGTATTGACAAGC+GGG 0.543658 5.4:-11983600 None:intergenic
GCTTCGAGAGCCAATTGAAA+GGG 0.560533 5.4:+11984949 MS.gene59339:CDS
CCAAATTCACCAAGAAAAGG+TGG 0.566129 5.4:-11985028 None:intergenic
GTTACTACAATGGCATGGAA+TGG 0.566673 5.4:+11985101 MS.gene59339:CDS
GGCTTCGAGAGCCAATTGAA+AGG 0.569118 5.4:+11984948 MS.gene59339:CDS
AATCTGAGAAAGAAAATCAA+AGG 0.580369 5.4:+11984927 MS.gene59339:CDS
AACTTCCACTGACTGAGACA+TGG 0.581765 5.4:-11984999 None:intergenic
TTCATCCATGTCTCAGTCAG+TGG 0.582296 5.4:+11984994 MS.gene59339:CDS
GAAGAAGGATAGGCTTGCAA+TGG 0.584642 5.4:+11983882 MS.gene59339:CDS
AATGAAACATGTTACTACAA+TGG 0.596613 5.4:+11985091 MS.gene59339:CDS
TGTATAGGTGTTGAAGCTAA+CGG 0.597602 5.4:+11984892 MS.gene59339:intron
TATTTGGGTGTATTGACAAG+CGG 0.598429 5.4:-11983601 None:intergenic
GGTTCCAGAATCGAAGAGCT+AGG 0.598892 5.4:+11983938 MS.gene59339:CDS
ACTTGATACTAACCTTGTTG+AGG 0.606044 5.4:-11983627 None:intergenic
GAGATACTTCTCAAGAATGG+TGG 0.612212 5.4:-11984016 None:intergenic
AACATGTTACTACAATGGCA+TGG 0.616964 5.4:+11985096 MS.gene59339:CDS
GAAGTATCTCCTTGAAACCA+AGG 0.625666 5.4:+11984029 MS.gene59339:CDS
CAAATTCACCAAGAAAAGGT+GGG 0.668413 5.4:-11985027 None:intergenic
ACCCAAATAATTCCTCAACA+AGG 0.682907 5.4:+11983615 MS.gene59339:CDS
TTTGGGTGTATTGACAAGCG+GGG 0.697480 5.4:-11983599 None:intergenic
TCCAGAATCGAAGAGCTAGG+TGG 0.707809 5.4:+11983941 MS.gene59339:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACAAAGTAATTAAATAA+AGG - chr5.4:11984409-11984428 None:intergenic 10.0%
!! TTCAAAAAATATAATATTGT+TGG - chr5.4:11984219-11984238 None:intergenic 10.0%
!!! TTATTAAAATTTAAAATCAG+TGG + chr5.4:11984144-11984163 MS.gene59339:intron 10.0%
!! AAAAAAAAATGCATAAAAAG+AGG - chr5.4:11984069-11984088 None:intergenic 15.0%
!! CTATAGTAATATAATATTGT+TGG - chr5.4:11984247-11984266 None:intergenic 15.0%
!!! AACCAATTAAATTTGTTATT+TGG + chr5.4:11984767-11984786 MS.gene59339:intron 15.0%
!!! ACTTTATCATTTTTCATTAA+GGG - chr5.4:11984530-11984549 None:intergenic 15.0%
!!! ATTTTTTGGTATGTTTTTTT+AGG + chr5.4:11983703-11983722 MS.gene59339:intron 15.0%
!!! TACTTTATCATTTTTCATTA+AGG - chr5.4:11984531-11984550 None:intergenic 15.0%
!!! TTTTTTGGTATGTTTTTTTA+GGG + chr5.4:11983704-11983723 MS.gene59339:intron 15.0%
!!! AAAATTTAAAATCAGTGGAT+TGG + chr5.4:11984149-11984168 MS.gene59339:intron 20.0%
!!! AAAATTTTGGAGGAAAATTT+TGG + chr5.4:11983835-11983854 MS.gene59339:CDS 20.0%
!!! CAATTAAATTTGTTATTTGG+CGG + chr5.4:11984770-11984789 MS.gene59339:intron 20.0%
!!! CTTTATCATTTTTCATTAAG+GGG - chr5.4:11984529-11984548 None:intergenic 20.0%
!!! TTTTTGGTATGTTTTTTTAG+GGG + chr5.4:11983705-11983724 MS.gene59339:intron 20.0%
! AATCTGAGAAAGAAAATCAA+AGG + chr5.4:11984927-11984946 MS.gene59339:CDS 25.0%
! AATGAAACATGTTACTACAA+TGG + chr5.4:11985091-11985110 MS.gene59339:CDS 25.0%
! ACACCTATACAAACAATTAA+TGG - chr5.4:11984883-11984902 None:intergenic 25.0%
! ACCAAATATTGAACAAAAAG+AGG + chr5.4:11983791-11983810 MS.gene59339:CDS 25.0%
! ATTCTCTCTTTCAACATTTA+AGG - chr5.4:11984457-11984476 None:intergenic 25.0%
! CGCCAAATAACAAATTTAAT+TGG - chr5.4:11984772-11984791 None:intergenic 25.0%
! GTTCCATTAATTGTTTGTAT+AGG + chr5.4:11984877-11984896 MS.gene59339:intron 25.0%
! TTCTCTCTTTCAACATTTAA+GGG - chr5.4:11984456-11984475 None:intergenic 25.0%
! TTGTAGTAACATGTTTCATT+AGG - chr5.4:11985091-11985110 None:intergenic 25.0%
!! TCCTCTTTTTGTTCAATATT+TGG - chr5.4:11983795-11983814 None:intergenic 25.0%
!! TGATGAACAGATGAAAATTT+TGG + chr5.4:11983822-11983841 MS.gene59339:CDS 25.0%
AACACTAGTAACGTCAATTT+AGG + chr5.4:11984294-11984313 MS.gene59339:intron 30.0%
AACCTTGTTGAGGAATTATT+TGG - chr5.4:11983620-11983639 None:intergenic 30.0%
ACACTAGTAACGTCAATTTA+GGG + chr5.4:11984295-11984314 MS.gene59339:intron 30.0%
ACCTTGTTGAGGAATTATTT+GGG - chr5.4:11983619-11983638 None:intergenic 30.0%
TAGATAAATAGCAATGCTCA+TGG - chr5.4:11984710-11984729 None:intergenic 30.0%
! TGAACAGATGAAAATTTTGG+AGG + chr5.4:11983825-11983844 MS.gene59339:CDS 30.0%
! TGGAAATATGGTCACATTTT+TGG - chr5.4:11984690-11984709 None:intergenic 30.0%
!! TGAGAACTTGATAATGTGAA+CGG - chr5.4:11984569-11984588 None:intergenic 30.0%
AACATGTTACTACAATGGCA+TGG + chr5.4:11985096-11985115 MS.gene59339:CDS 35.0%
AAGGAGATACTTCTCAAGAA+TGG - chr5.4:11984022-11984041 None:intergenic 35.0%
ACACCAAATTCACCAAGAAA+AGG - chr5.4:11985034-11985053 None:intergenic 35.0%
ACACGATGTTTCATTTCATG+TGG + chr5.4:11984599-11984618 MS.gene59339:intron 35.0%
ACATGAAATGAAACATCGTG+TGG - chr5.4:11984600-11984619 None:intergenic 35.0%
ACCCAAATAATTCCTCAACA+AGG + chr5.4:11983615-11983634 MS.gene59339:CDS 35.0%
ACTGAGACATAAGCATCATT+TGG - chr5.4:11983575-11983594 None:intergenic 35.0%
ACTTGATACTAACCTTGTTG+AGG - chr5.4:11983630-11983649 None:intergenic 35.0%
CAAATTCACCAAGAAAAGGT+GGG - chr5.4:11985030-11985049 None:intergenic 35.0%
CGTAGTAAGAAGAACAAAAG+TGG + chr5.4:11983754-11983773 MS.gene59339:CDS 35.0%
GCATAAAAAGAGGAAGAAAG+AGG - chr5.4:11984059-11984078 None:intergenic 35.0%
TAAACTTGAGTCAGAGAAGA+AGG + chr5.4:11983867-11983886 MS.gene59339:CDS 35.0%
TAGCAATGCTCATGGAAATA+TGG - chr5.4:11984702-11984721 None:intergenic 35.0%
TTGAAAGAGAGAATAAGCAC+TGG + chr5.4:11984463-11984482 MS.gene59339:intron 35.0%
! TATTTGGGTGTATTGACAAG+CGG - chr5.4:11983604-11983623 None:intergenic 35.0%
! TGTTATTTGGCGGAAATCAA+GGG + chr5.4:11984780-11984799 MS.gene59339:intron 35.0%
!! GGTGAATTTGGTGTTGATAA+CGG + chr5.4:11985040-11985059 MS.gene59339:CDS 35.0%
!! TAAGCATCATTTGGTCTTGA+TGG - chr5.4:11983566-11983585 None:intergenic 35.0%
!! TGTATAGGTGTTGAAGCTAA+CGG + chr5.4:11984892-11984911 MS.gene59339:intron 35.0%
!! TTGTTATTTGGCGGAAATCA+AGG + chr5.4:11984779-11984798 MS.gene59339:intron 35.0%
AACCATACTGCAACTTGTCT+GGG - chr5.4:11983922-11983941 None:intergenic 40.0%
ATGCTACCATGTTTCTTCTC+TGG + chr5.4:11984323-11984342 MS.gene59339:intron 40.0%
CCAAATTCACCAAGAAAAGG+TGG - chr5.4:11985031-11985050 None:intergenic 40.0%
CTGCATGTTACCCTTTCAAT+TGG - chr5.4:11984962-11984981 None:intergenic 40.0%
GAGATACTTCTCAAGAATGG+TGG - chr5.4:11984019-11984038 None:intergenic 40.0%
GTTACTACAATGGCATGGAA+TGG + chr5.4:11985101-11985120 MS.gene59339:CDS 40.0%
TTGAGTCAGAGAAGAAGGAT+AGG + chr5.4:11983872-11983891 MS.gene59339:CDS 40.0%
! AGAGGTATACCTTGGTTTCA+AGG - chr5.4:11984041-11984060 None:intergenic 40.0%
! AGGAAGAAAGAGGTATACCT+TGG - chr5.4:11984049-11984068 None:intergenic 40.0%
! ATTTGGGTGTATTGACAAGC+GGG - chr5.4:11983603-11983622 None:intergenic 40.0%
! CCACCTTTTCTTGGTGAATT+TGG + chr5.4:11985028-11985047 MS.gene59339:CDS 40.0%
! GAAGTATCTCCTTGAAACCA+AGG + chr5.4:11984029-11984048 MS.gene59339:CDS 40.0%
!! ACTTGATAATGTGAACGGCT+TGG - chr5.4:11984564-11984583 None:intergenic 40.0%
AGACCACCAGAGAAGAAACA+TGG - chr5.4:11984332-11984351 None:intergenic 45.0%
ATCCCAGACAAGTTGCAGTA+TGG + chr5.4:11983917-11983936 MS.gene59339:CDS 45.0%
CTACCATGTTTCTTCTCTGG+TGG + chr5.4:11984326-11984345 MS.gene59339:intron 45.0%
GAACCATACTGCAACTTGTC+TGG - chr5.4:11983923-11983942 None:intergenic 45.0%
GAAGAAGGATAGGCTTGCAA+TGG + chr5.4:11983882-11983901 MS.gene59339:CDS 45.0%
GCTTCGAGAGCCAATTGAAA+GGG + chr5.4:11984949-11984968 MS.gene59339:CDS 45.0%
TATTTGGCGGAAATCAAGGG+AGG + chr5.4:11984783-11984802 MS.gene59339:intron 45.0%
TGTTTCTTCTCTGGTGGTCT+TGG + chr5.4:11984332-11984351 MS.gene59339:intron 45.0%
TTCATCCATGTCTCAGTCAG+TGG + chr5.4:11984994-11985013 MS.gene59339:CDS 45.0%
TTCTTACTACGCTTGCGTCT+TGG - chr5.4:11983745-11983764 None:intergenic 45.0%
! AACTTCCACTGACTGAGACA+TGG - chr5.4:11985002-11985021 None:intergenic 45.0%
! TTTGGGTGTATTGACAAGCG+GGG - chr5.4:11983602-11983621 None:intergenic 45.0%
!! GAATAAGCACTGGCATGCAA+CGG + chr5.4:11984473-11984492 MS.gene59339:intron 45.0%
!!! TAGTTAATTATAATATTTTT+TGG + chr5.4:11983689-11983708 MS.gene59339:intron 5.0%
GATAGGCTTGCAATGGAGCT+TGG + chr5.4:11983889-11983908 MS.gene59339:CDS 50.0%
GGCTTCGAGAGCCAATTGAA+AGG + chr5.4:11984948-11984967 MS.gene59339:CDS 50.0%
GGTTCCAGAATCGAAGAGCT+AGG + chr5.4:11983938-11983957 MS.gene59339:CDS 50.0%
GTCTCAGTCAGTGGAAGTTG+TGG + chr5.4:11985003-11985022 MS.gene59339:CDS 50.0%
TCCAGAATCGAAGAGCTAGG+TGG + chr5.4:11983941-11983960 MS.gene59339:CDS 50.0%
! GTTGTGGACCCACCTTTTCT+TGG + chr5.4:11985019-11985038 MS.gene59339:CDS 50.0%
! TCCACCTAGCTCTTCGATTC+TGG - chr5.4:11983945-11983964 None:intergenic 50.0%
CTACGCTTGCGTCTTGGCTT+TGG - chr5.4:11983739-11983758 None:intergenic 55.0%
CTGGCATGCAACGGTTCTTC+AGG + chr5.4:11984482-11984501 MS.gene59339:intron 55.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 11983558 11985141 11983558 ID=MS.gene59339
chr5.4 mRNA 11983558 11985141 11983558 ID=MS.gene59339.t1;Parent=MS.gene59339
chr5.4 exon 11983558 11983636 11983558 ID=MS.gene59339.t1.exon1;Parent=MS.gene59339.t1
chr5.4 CDS 11983558 11983636 11983558 ID=cds.MS.gene59339.t1;Parent=MS.gene59339.t1
chr5.4 exon 11983725 11984050 11983725 ID=MS.gene59339.t1.exon2;Parent=MS.gene59339.t1
chr5.4 CDS 11983725 11984050 11983725 ID=cds.MS.gene59339.t1;Parent=MS.gene59339.t1
chr5.4 exon 11984899 11985141 11984899 ID=MS.gene59339.t1.exon3;Parent=MS.gene59339.t1
chr5.4 CDS 11984899 11985141 11984899 ID=cds.MS.gene59339.t1;Parent=MS.gene59339.t1
Gene Sequence

>MS.gene59339

ATGAACCATCAAGACCAAATGATGCTTATGTCTCAGTTATTCCCCGCTTGTCAATACACCCAAATAATTCCTCAACAAGGTTAGTATCAAGTTCATACATAACATTTTATTGTATCATCAAAATTTCTAGATAGTTAATTATAATATTTTTTGGTATGTTTTTTTAGGGGAGAAGAAGCCAAAGCCAAGACGCAAGCGTAGTAAGAAGAACAAAAGTGGAGAAAACAGTGCTAACCAAATATTGAACAAAAAGAGGAAATTGAGTGATGAACAGATGAAAATTTTGGAGGAAAATTTTGGAAATGAACATAAACTTGAGTCAGAGAAGAAGGATAGGCTTGCAATGGAGCTTGGTTTAGATCCCAGACAAGTTGCAGTATGGTTCCAGAATCGAAGAGCTAGGTGGAAGAACAAGAAACTTGAAGAAGAGTACTTAAGTCTTAAAAAAATTCATGAATCCACCATTCTTGAGAAGTATCTCCTTGAAACCAAGGTATACCTCTTTCTTCCTCTTTTTATGCATTTTTTTTTATGCAACTAGCTACAATTTCATTAAACTATGTTAATTTGTTTTTTTAATTAACTATTATTAAAATTTAAAATCAGTGGATTGGATTATAATTTGACATCAAAGTTTTAATTTCAAATCATCATTTCTCCAACAATATTATATTTTTTGAACAAGTCCAACAATATTATATTACTATAGTGTTATGTTTTTATTTGTCTAAACACAAACACTAGTAACGTCAATTTAGGGCAAGCATGCTACCATGTTTCTTCTCTGGTGGTCTTGGTATTTATTTTATTCACTATTGTTGTTACTTTAGCTCTACATGTCGTTGTTTCCTTTATTTAATTACTTTGTTTATAAAAGTTGTTTGCTTAGTTTAATCCCTTAAATGTTGAAAGAGAGAATAAGCACTGGCATGCAACGGTTCTTCAGGACAAATCAAAAAGAAAAGAAACCCCTTAATGAAAAATGATAAAGTAGAAACTTAGACCAAGCCGTTCACATTATCAAGTTCTCATTTGTCAGCCACACGATGTTTCATTTCATGTGGAATTTTTTAAAAATAATATACGTAAAATTAAAAGTAAGATAAATCAAAAGCACAAACAAAGAATTCCAAAAATGTGACCATATTTCCATGAGCATTGCTATTTATCTAGAGAGTTTTTATCAAGAATTTATCAAGAAAATGTCTCAACCAATTAAATTTGTTATTTGGCGGAAATCAAGGGAGGTAATGATGCGTAATTAAGAAAAAGTGTTTGCAAATACACTGTCTTGAAATTTTCTTACAATATTATTTAATGTTCCATTAATTGTTTGTATAGGTGTTGAAGCTAACGGAGCAACTCTCAGAATCTGAGAAAGAAAATCAAAGGCTTCGAGAGCCAATTGAAAGGGTAACATGCAGCAGTTCAAGTACTTCATCCATGTCTCAGTCAGTGGAAGTTGTGGACCCACCTTTTCTTGGTGAATTTGGTGTTGATAACGGATATGACGATGATGTGTTTTTCATGCCTAATGAAACATGTTACTACAATGGCATGGAATGGATAAGTTTGTACAAGTAG
Protein sequence

>MS.gene59339.t1

MNHQDQMMLMSQLFPACQYTQIIPQQGEKKPKPRRKRSKKNKSGENSANQILNKKRKLSDEQMKILEENFGNEHKLESEKKDRLAMELGLDPRQVAVWFQNRRARWKNKKLEEEYLSLKKIHESTILEKYLLETKVLKLTEQLSESEKENQRLREPIERVTCSSSSTSSMSQSVEVVDPPFLGEFGVDNGYDDDVFFMPNETCYYNGMEWISLYK