Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59762.t1 | XP_004511180.1 | 55.4 | 352 | 135 | 8 | 1 | 345 | 1 | 337 | 2.00E-93 | 353.6 |
| MS.gene59762.t1 | XP_004511180.1 | 59 | 61 | 23 | 1 | 592 | 650 | 385 | 445 | 1.40E-11 | 81.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59762.t1 | O24606 | 46.9 | 307 | 146 | 5 | 12 | 309 | 33 | 331 | 6.2e-72 | 273.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59762.t1 | A0A1S2YWS8 | 55.4 | 352 | 135 | 8 | 1 | 345 | 1 | 337 | 1.4e-93 | 353.6 |
| MS.gene59762.t1 | A0A1S2YWS8 | 59.0 | 61 | 23 | 1 | 592 | 650 | 385 | 445 | 1.0e-11 | 81.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene59762.t1 | TF | EIL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59762.t1 | MTR_5g087790 | 46.250 | 320 | 149 | 5 | 5 | 312 | 26 | 334 | 1.21e-88 | 288 |
| MS.gene59762.t1 | MTR_3g078770 | 45.483 | 321 | 149 | 7 | 6 | 314 | 30 | 336 | 1.21e-82 | 273 |
| MS.gene59762.t1 | MTR_2g098470 | 42.378 | 328 | 149 | 7 | 21 | 324 | 31 | 342 | 6.35e-74 | 249 |
| MS.gene59762.t1 | MTR_6g460640 | 40.777 | 309 | 173 | 4 | 2 | 307 | 17 | 318 | 2.75e-72 | 246 |
| MS.gene59762.t1 | MTR_6g060600 | 40.453 | 309 | 174 | 4 | 2 | 307 | 17 | 318 | 3.18e-71 | 243 |
| MS.gene59762.t1 | MTR_3g087530 | 43.462 | 260 | 134 | 4 | 26 | 278 | 30 | 283 | 1.05e-69 | 233 |
| MS.gene59762.t1 | MTR_8g091370 | 46.491 | 228 | 116 | 4 | 52 | 278 | 52 | 274 | 5.43e-66 | 224 |
| MS.gene59762.t1 | MTR_3g010790 | 42.692 | 260 | 133 | 6 | 73 | 327 | 1 | 249 | 3.42e-63 | 218 |
| MS.gene59762.t1 | MTR_7g095580 | 76.238 | 101 | 24 | 0 | 62 | 162 | 1 | 101 | 7.95e-47 | 160 |
| MS.gene59762.t1 | MTR_1g024420 | 33.654 | 104 | 58 | 2 | 23 | 115 | 5 | 108 | 8.08e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59762.t1 | AT3G20770 | 46.906 | 307 | 146 | 5 | 12 | 309 | 33 | 331 | 5.10e-87 | 285 |
| MS.gene59762.t1 | AT2G27050 | 46.179 | 301 | 143 | 6 | 21 | 309 | 42 | 335 | 9.56e-83 | 272 |
| MS.gene59762.t1 | AT1G73730 | 42.006 | 319 | 151 | 7 | 21 | 319 | 31 | 335 | 8.24e-71 | 240 |
| MS.gene59762.t1 | AT1G73730 | 42.006 | 319 | 151 | 7 | 21 | 319 | 19 | 323 | 8.74e-71 | 239 |
| MS.gene59762.t1 | AT5G10120 | 48.000 | 225 | 113 | 2 | 55 | 279 | 59 | 279 | 1.71e-69 | 234 |
| MS.gene59762.t1 | AT5G65100 | 47.111 | 225 | 112 | 3 | 54 | 277 | 88 | 306 | 1.12e-65 | 226 |
| MS.gene59762.t1 | AT5G21120 | 45.247 | 263 | 127 | 7 | 55 | 308 | 87 | 341 | 1.11e-64 | 222 |
| MS.gene59762.t1 | AT5G21120 | 45.247 | 263 | 127 | 7 | 55 | 308 | 87 | 341 | 1.11e-64 | 222 |
| MS.gene59762.t1 | AT5G21120 | 45.247 | 263 | 127 | 7 | 55 | 308 | 94 | 348 | 1.53e-64 | 222 |
Find 154 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCACCTTGTGCACTTTC+TGG | 0.076552 | 8.3:-55401921 | None:intergenic |
| CCATTCCAAGAAAGTGTTTA+TGG | 0.164210 | 8.3:+55403909 | MS.gene59762:CDS |
| CCTAGCTGGGTTTCATTCTT+TGG | 0.171554 | 8.3:+55404649 | MS.gene59762:CDS |
| CCTACCTCAATCTGCTAATT+TGG | 0.184321 | 8.3:+55404505 | MS.gene59762:CDS |
| CGGTTCCATGGACACTTTCT+TGG | 0.205051 | 8.3:-55404124 | None:intergenic |
| CATTGAATTTGAATATTTCT+TGG | 0.208852 | 8.3:-55402298 | None:intergenic |
| AACAGGTTTCCTTTGGAAAA+AGG | 0.215179 | 8.3:+55403303 | MS.gene59762:intron |
| GGACTTCATTATAATGTTAA+TGG | 0.231962 | 8.3:+55402269 | MS.gene59762:CDS |
| GAATATAAGCATGGGTATTA+TGG | 0.267844 | 8.3:+55401983 | MS.gene59762:CDS |
| CTCATATATAAAATGGAAAT+TGG | 0.269046 | 8.3:+55401876 | None:intergenic |
| GGCCTAATAACCTTGTTTCT+TGG | 0.269096 | 8.3:-55404548 | None:intergenic |
| CAACAATGAAGAAAGAAATT+TGG | 0.285533 | 8.3:+55401947 | MS.gene59762:CDS |
| TGTACGTACCTTCTTTGATT+TGG | 0.287101 | 8.3:-55402413 | None:intergenic |
| TCCACCTCATTGTGTTGATT+TGG | 0.292463 | 8.3:+55403740 | MS.gene59762:CDS |
| TGGTTCCATGGACACTTTCT+TGG | 0.303912 | 8.3:-55404262 | None:intergenic |
| CAATAACCAACCTCAACATT+TGG | 0.307351 | 8.3:+55404364 | MS.gene59762:CDS |
| CATTTGGATTTGTTTCCATT+TGG | 0.311773 | 8.3:+55404380 | MS.gene59762:CDS |
| TTGCTTCCATTTGCTAGAAA+TGG | 0.320841 | 8.3:-55404329 | None:intergenic |
| AGATCATGAGGTTTCCTATA+GGG | 0.321543 | 8.3:-55403405 | None:intergenic |
| TGGTTCCATAAACACTTTCT+TGG | 0.323490 | 8.3:-55403914 | None:intergenic |
| TGGTTCCATGAACACTTTCT+TGG | 0.324707 | 8.3:-55403986 | None:intergenic |
| CAATAATCAACCTCAACATT+TGG | 0.328894 | 8.3:+55404226 | MS.gene59762:CDS |
| TCAACCTCAACATTTGGATT+TGG | 0.332699 | 8.3:+55404232 | MS.gene59762:CDS |
| TTAATAACCATGCTGCTTCC+AGG | 0.333225 | 8.3:-55403855 | None:intergenic |
| TTCTGTAAGGACAATTCATT+TGG | 0.339985 | 8.3:-55404688 | None:intergenic |
| ACCATGGTGCTTCCATTTGA+TGG | 0.342571 | 8.3:-55404059 | None:intergenic |
| AGAGCGAGGTACGTGGTTAC+TGG | 0.343410 | 8.3:+55404584 | MS.gene59762:CDS |
| TATGATGTTGATGGAAATAA+TGG | 0.343859 | 8.3:+55403681 | MS.gene59762:CDS |
| CCAACCTCAATGTATGGATT+TGG | 0.345365 | 8.3:+55403884 | MS.gene59762:CDS |
| CCAACCTCAATGTATGGATT+TGG | 0.345365 | 8.3:+55404094 | MS.gene59762:CDS |
| CGTGCTGATGGATTTGTATA+TGG | 0.353695 | 8.3:+55402128 | MS.gene59762:CDS |
| CCAACGTCAATGTATGGATT+TGG | 0.355037 | 8.3:+55403956 | MS.gene59762:CDS |
| CCAACGTCAATGTATGGATT+TGG | 0.355037 | 8.3:+55404028 | MS.gene59762:CDS |
| CCAACGTCAATGTATGGATT+TGG | 0.355037 | 8.3:+55404166 | MS.gene59762:CDS |
| TGAAGAATGGTGGCCGCTAT+TGG | 0.355779 | 8.3:+55403356 | MS.gene59762:CDS |
| CTCGCTCTCCTGGTGGCAAT+TGG | 0.359933 | 8.3:-55404569 | None:intergenic |
| GTGCTCCTATTGTTGTGTTT+AGG | 0.361123 | 8.3:-55402358 | None:intergenic |
| TCTTGAACATTGTCTTTGAA+TGG | 0.363036 | 8.3:-55403765 | None:intergenic |
| CCAAATGGAAGCAATAATAA+TGG | 0.368258 | 8.3:+55403627 | MS.gene59762:CDS |
| ACTCTTCAATACCTTGTCTA+TGG | 0.369025 | 8.3:-55402081 | None:intergenic |
| CTCCAAGAAACAAGGTTATT+AGG | 0.373520 | 8.3:+55404546 | MS.gene59762:CDS |
| CCATTCCAAGAAAGTGTTCA+TGG | 0.375962 | 8.3:+55403981 | MS.gene59762:CDS |
| CCTTACAGAAATAACTCTTC+TGG | 0.387874 | 8.3:+55404701 | MS.gene59762:CDS |
| ATATTTGAACAGGTTTCCTT+TGG | 0.388064 | 8.3:+55403296 | MS.gene59762:intron |
| GAACTCCTAAACACAACAAT+AGG | 0.388891 | 8.3:+55402353 | MS.gene59762:CDS |
| CATTATAATGAAGTCCTTGT+TGG | 0.390991 | 8.3:-55402262 | None:intergenic |
| TTGGTTCCATTTCCATCAAA+TGG | 0.392196 | 8.3:+55404047 | MS.gene59762:CDS |
| GTGCTTCCATTTGATGGAAA+TGG | 0.394257 | 8.3:-55404053 | None:intergenic |
| CCAGAAGAGTTATTTCTGTA+AGG | 0.399499 | 8.3:-55404701 | None:intergenic |
| TTCCTATAGGGTGGAGGACC+TGG | 0.400683 | 8.3:-55403393 | None:intergenic |
| CTATCATGTTCATTGTTGCC+TGG | 0.400918 | 8.3:-55402038 | None:intergenic |
| CCATTATTATTGCTTCCATT+TGG | 0.403275 | 8.3:-55403627 | None:intergenic |
| AAGTGTCCATGGAACCAATA+TGG | 0.403477 | 8.3:+55404268 | MS.gene59762:CDS |
| TTGGTTCCATTTCTAGCAAA+TGG | 0.404580 | 8.3:+55404323 | MS.gene59762:CDS |
| TCATTATAATGTTAATGGTT+CGG | 0.414528 | 8.3:+55402274 | MS.gene59762:CDS |
| CCTTATCATAGCCACCTAGC+TGG | 0.416024 | 8.3:+55404635 | MS.gene59762:CDS |
| GAAGAATGGTGGCCGCTATT+GGG | 0.417869 | 8.3:+55403357 | MS.gene59762:CDS |
| ACTCATAATTATGATGTTGA+TGG | 0.419818 | 8.3:+55403672 | MS.gene59762:CDS |
| CCCCTTGGCCACCATGGTGG+TGG | 0.420832 | 8.3:-55403330 | None:intergenic |
| TAGATCATGAGGTTTCCTAT+AGG | 0.421514 | 8.3:-55403406 | None:intergenic |
| CAATAACCAACGTCAATGTA+TGG | 0.424652 | 8.3:+55404160 | MS.gene59762:CDS |
| CAATAACCAACGTCAATGTA+TGG | 0.429878 | 8.3:+55404298 | MS.gene59762:CDS |
| TAATAACCAACGTCAATGTA+TGG | 0.431013 | 8.3:+55403950 | MS.gene59762:CDS |
| TAATAACCAACGTCAATGTA+TGG | 0.431013 | 8.3:+55404022 | MS.gene59762:CDS |
| CAATAACCAACCTCAATGTA+TGG | 0.431840 | 8.3:+55404088 | MS.gene59762:CDS |
| TTGTCATGTCTTATGACATT+TGG | 0.434470 | 8.3:+55402383 | MS.gene59762:CDS |
| AAATAACCAACCTCAATGTA+TGG | 0.435118 | 8.3:+55403878 | MS.gene59762:CDS |
| CCATGAACACTTTCTTGGAA+TGG | 0.437818 | 8.3:-55403981 | None:intergenic |
| CCATGGACACTTTCTTGGAA+TGG | 0.437818 | 8.3:-55404119 | None:intergenic |
| CCATGGACACTTTCTTGGAA+TGG | 0.437818 | 8.3:-55404257 | None:intergenic |
| CCATAAACACTTTCTTGGAA+TGG | 0.438021 | 8.3:-55403909 | None:intergenic |
| CCAGGAACACTTGCTTGAAA+AGG | 0.440379 | 8.3:-55403837 | None:intergenic |
| TTCCACCACCATGGTGGCCA+AGG | 0.449334 | 8.3:+55403328 | MS.gene59762:CDS |
| CCAGCTAGGTGGCTATGATA+AGG | 0.457593 | 8.3:-55404635 | None:intergenic |
| CACCATTCTTCATCTCCCCT+TGG | 0.458151 | 8.3:-55403345 | None:intergenic |
| CTGAAAATCTTCAACATTGG+TGG | 0.458620 | 8.3:+55402189 | MS.gene59762:CDS |
| AGCTGGGTTTCATTCTTTGG+AGG | 0.464728 | 8.3:+55404652 | MS.gene59762:CDS |
| AATAACAACAGCGAAGTTAG+TGG | 0.472215 | 8.3:-55403553 | None:intergenic |
| TTATTATTGCTTCCATTTGG+TGG | 0.472616 | 8.3:-55403624 | None:intergenic |
| ATGCACAAGTTGGTAGATCT+TGG | 0.474850 | 8.3:+55402104 | MS.gene59762:CDS |
| ATCCAGGTCCTCCACCCTAT+AGG | 0.477367 | 8.3:+55403391 | MS.gene59762:CDS |
| AAAGTGAAGTTTGATAGAAA+TGG | 0.479002 | 8.3:+55402218 | MS.gene59762:CDS |
| GTAGATCTTGGTCGTGCTGA+TGG | 0.482508 | 8.3:+55402116 | MS.gene59762:CDS |
| GTTGTAATCCAAATCAAAGA+AGG | 0.482832 | 8.3:+55402405 | MS.gene59762:CDS |
| GTAACCAAATTAGCAGATTG+AGG | 0.484664 | 8.3:-55404509 | None:intergenic |
| TCAAATGCGTTACCACCAAA+TGG | 0.485155 | 8.3:+55403612 | MS.gene59762:CDS |
| GACCAGGTAGTTCAAGTAAT+GGG | 0.486798 | 8.3:+55403706 | MS.gene59762:CDS |
| CAGCTAGGTGGCTATGATAA+GGG | 0.488469 | 8.3:-55404634 | None:intergenic |
| CTTATCATAGCCACCTAGCT+GGG | 0.489975 | 8.3:+55404636 | MS.gene59762:CDS |
| TCATCTCCCCTTGGCCACCA+TGG | 0.490729 | 8.3:-55403336 | None:intergenic |
| AGATAAAATGTCTGCACAAG+AGG | 0.509456 | 8.3:+55403530 | MS.gene59762:CDS |
| TGGTACTTCACTATTGCAGC+AGG | 0.513940 | 8.3:-55402242 | None:intergenic |
| AACCACGTACCTCGCTCTCC+TGG | 0.514697 | 8.3:-55404579 | None:intergenic |
| TTGGGTTATCGAAAGGATCC+AGG | 0.525393 | 8.3:+55403375 | MS.gene59762:CDS |
| CCAAATCCATACATTGAGGT+TGG | 0.529172 | 8.3:-55403884 | None:intergenic |
| CCAAATCCATACATTGAGGT+TGG | 0.529172 | 8.3:-55404094 | None:intergenic |
| ACAAATCCAAATGTTGAGGT+TGG | 0.531049 | 8.3:-55404370 | None:intergenic |
| TGCCCATTACTTGAACTACC+TGG | 0.531064 | 8.3:-55403708 | None:intergenic |
| TTCAAAGACAATGTTCAAGA+AGG | 0.537403 | 8.3:+55403768 | MS.gene59762:CDS |
| CATCTGAAAATCTTCAACAT+TGG | 0.541776 | 8.3:+55402186 | MS.gene59762:CDS |
| CCAAATTAGCAGATTGAGGT+AGG | 0.544542 | 8.3:-55404505 | None:intergenic |
| TCCACCACCATGGTGGCCAA+GGG | 0.545349 | 8.3:+55403329 | MS.gene59762:CDS |
| GAAATTTGGAGGAATATGAA+AGG | 0.546481 | 8.3:+55401961 | MS.gene59762:CDS |
| CAAAATCTATACATTGAGGT+TGG | 0.547188 | 8.3:-55403812 | None:intergenic |
| CCATTCCAAGAAAGTGTCCA+TGG | 0.548559 | 8.3:+55404119 | MS.gene59762:CDS |
| CCATTCCAAGAAAGTGTCCA+TGG | 0.548559 | 8.3:+55404257 | MS.gene59762:CDS |
| CCAACGTCAATGTATGGACT+TGG | 0.556305 | 8.3:+55404304 | MS.gene59762:CDS |
| TTGGTTATTGTTAACAACCA+TGG | 0.564781 | 8.3:-55404075 | None:intergenic |
| ATATGAAAGGAATATAAGCA+TGG | 0.566014 | 8.3:+55401974 | MS.gene59762:CDS |
| GGCCAAGGGGAGATGAAGAA+TGG | 0.566706 | 8.3:+55403343 | MS.gene59762:CDS |
| GGACCAGGTAGTTCAAGTAA+TGG | 0.567507 | 8.3:+55403705 | MS.gene59762:CDS |
| CAATGAAGAAAGAAATTTGG+AGG | 0.568734 | 8.3:+55401950 | MS.gene59762:CDS |
| GGAGCAAAATCTATACATTG+AGG | 0.569747 | 8.3:-55403816 | None:intergenic |
| TTATTAGGCCAATTGCCACC+AGG | 0.570900 | 8.3:+55404561 | MS.gene59762:CDS |
| GGAAACAAATCCAAATGTTG+AGG | 0.577317 | 8.3:-55404374 | None:intergenic |
| TATGAAAGGAATATAAGCAT+GGG | 0.585257 | 8.3:+55401975 | MS.gene59762:CDS |
| ATTGAAGAGTATGCACAAGT+TGG | 0.591118 | 8.3:+55402094 | MS.gene59762:CDS |
| GCCGCTATTGGGTTATCGAA+AGG | 0.591129 | 8.3:+55403368 | MS.gene59762:CDS |
| GATGGAAATAATGGAGGACC+AGG | 0.593292 | 8.3:+55403690 | MS.gene59762:CDS |
| GGAACCAAATCCAAATGTTG+AGG | 0.598561 | 8.3:-55404236 | None:intergenic |
| AAATCTTCAACATTGGTGGA+AGG | 0.602303 | 8.3:+55402193 | MS.gene59762:CDS |
| TCTCCCCTTGGCCACCATGG+TGG | 0.603176 | 8.3:-55403333 | None:intergenic |
| TGAGGTTTCCTATAGGGTGG+AGG | 0.603546 | 8.3:-55403399 | None:intergenic |
| CAATGTTCAAGAAGGCAACA+TGG | 0.603751 | 8.3:+55403776 | MS.gene59762:CDS |
| CCAAAGAATGAAACCCAGCT+AGG | 0.605751 | 8.3:-55404649 | None:intergenic |
| CCAAATCCATACATTGACGT+TGG | 0.608283 | 8.3:-55403956 | None:intergenic |
| CCAAATCCATACATTGACGT+TGG | 0.608283 | 8.3:-55404028 | None:intergenic |
| CCAAATCCATACATTGACGT+TGG | 0.608283 | 8.3:-55404166 | None:intergenic |
| GGAACCAAATCCATACATTG+AGG | 0.608410 | 8.3:-55403888 | None:intergenic |
| GGAACCAAATCCATACATTG+AGG | 0.608410 | 8.3:-55404098 | None:intergenic |
| AAGTGTTTATGGAACCAACA+TGG | 0.612817 | 8.3:+55403920 | MS.gene59762:CDS |
| TCTAGCAAATGGAAGCAACA+TGG | 0.615769 | 8.3:+55404334 | MS.gene59762:CDS |
| TCATGAGGTTTCCTATAGGG+TGG | 0.619245 | 8.3:-55403402 | None:intergenic |
| ACCAAATCAACACAATGAGG+TGG | 0.621822 | 8.3:-55403741 | None:intergenic |
| AAGTGTTCATGGAACCAACA+TGG | 0.623776 | 8.3:+55403992 | MS.gene59762:CDS |
| CACGTACCTCGCTCTCCTGG+TGG | 0.624504 | 8.3:-55404576 | None:intergenic |
| CCACCACCATGGTGGCCAAG+GGG | 0.638555 | 8.3:+55403330 | MS.gene59762:CDS |
| TCCAGAAAATGAAAGCAACA+TGG | 0.639563 | 8.3:+55404196 | MS.gene59762:CDS |
| AAGTGTCCATGGAACCGACA+TGG | 0.646793 | 8.3:+55404130 | MS.gene59762:CDS |
| TCCATCAAATGGAAGCACCA+TGG | 0.648218 | 8.3:+55404058 | MS.gene59762:CDS |
| AAGTGTTCCTGGAAGCAGCA+TGG | 0.648471 | 8.3:+55403848 | MS.gene59762:CDS |
| CCAAGTCCATACATTGACGT+TGG | 0.653474 | 8.3:-55404304 | None:intergenic |
| CAATTGCCACCAGGAGAGCG+AGG | 0.660773 | 8.3:+55404570 | MS.gene59762:CDS |
| TCCTTTCGATAACCCAATAG+CGG | 0.663958 | 8.3:-55403369 | None:intergenic |
| CACCAGGAGAGCGAGGTACG+TGG | 0.665675 | 8.3:+55404577 | MS.gene59762:CDS |
| GATGTTGATGGAAATAATGG+AGG | 0.666614 | 8.3:+55403684 | MS.gene59762:CDS |
| CAAGGGGAGATGAAGAATGG+TGG | 0.668606 | 8.3:+55403346 | MS.gene59762:CDS |
| AAGAATGAAACCCAGCTAGG+TGG | 0.679661 | 8.3:-55404646 | None:intergenic |
| GGAACCAAATCAACACAATG+AGG | 0.681148 | 8.3:-55403744 | None:intergenic |
| TGGCTATGATAAGGGCAATG+TGG | 0.683056 | 8.3:-55404626 | None:intergenic |
| AAATCACCAGAAAGTGCACA+AGG | 0.687654 | 8.3:+55401915 | MS.gene59762:CDS |
| ATTGAGTAACACCATAGACA+AGG | 0.713130 | 8.3:+55402070 | MS.gene59762:CDS |
| GCAATAGTGAAGTACCAACA+AGG | 0.715198 | 8.3:+55402248 | MS.gene59762:CDS |
| AAGGTGTTCCACCACCATGG+TGG | 0.732712 | 8.3:+55403322 | MS.gene59762:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAATAATTAATTTTAGTA+CGG | - | chr8.3:55403083-55403102 | None:intergenic | 10.0% |
| !!! | ATCTAAAATCTTAAAACATT+TGG | - | chr8.3:55402870-55402889 | None:intergenic | 15.0% |
| !!! | TAAGATTTTAGATAAAAATG+TGG | + | chr8.3:55402877-55402896 | MS.gene59762:intron | 15.0% |
| !!! | TATTTTTGTGAAATTATTAC+CGG | - | chr8.3:55402519-55402538 | None:intergenic | 15.0% |
| !! | ATTCAATTAAAAATCGAAGT+GGG | + | chr8.3:55403097-55403116 | MS.gene59762:intron | 20.0% |
| !! | CATTGAATTTGAATATTTCT+TGG | - | chr8.3:55402301-55402320 | None:intergenic | 20.0% |
| !! | GTTATTGTTAAAAACCATAT+TGG | - | chr8.3:55404285-55404304 | None:intergenic | 20.0% |
| !! | TATGGAATTATTCCAAAAAA+TGG | + | chr8.3:55402146-55402165 | MS.gene59762:CDS | 20.0% |
| !! | TATTCAATTAAAAATCGAAG+TGG | + | chr8.3:55403096-55403115 | MS.gene59762:intron | 20.0% |
| !! | TCATTATAATGTTAATGGTT+CGG | + | chr8.3:55402274-55402293 | MS.gene59762:CDS | 20.0% |
| !! | TTAAATATAATCACATGTCT+AGG | + | chr8.3:55402545-55402564 | MS.gene59762:intron | 20.0% |
| !!! | AGATTCTCATTATTTTGAAA+TGG | + | chr8.3:55403027-55403046 | MS.gene59762:intron | 20.0% |
| !!! | GATTCTCATTATTTTGAAAT+GGG | + | chr8.3:55403028-55403047 | MS.gene59762:intron | 20.0% |
| !!! | TCCTTATTTTACTAAAATCA+GGG | - | chr8.3:55403482-55403501 | None:intergenic | 20.0% |
| !!! | TCTAATTTTGCATCTAATAA+GGG | - | chr8.3:55402812-55402831 | None:intergenic | 20.0% |
| !!! | TTCTAATTTTGCATCTAATA+AGG | - | chr8.3:55402813-55402832 | None:intergenic | 20.0% |
| ! | AAACCTGTTCAAATATGTTA+CGG | - | chr8.3:55403292-55403311 | None:intergenic | 25.0% |
| ! | AAAGTGAAGTTTGATAGAAA+TGG | + | chr8.3:55402218-55402237 | MS.gene59762:CDS | 25.0% |
| ! | ACTCATAATTATGATGTTGA+TGG | + | chr8.3:55403672-55403691 | MS.gene59762:CDS | 25.0% |
| ! | AGAAGTTGAGCAATATATAA+AGG | + | chr8.3:55402829-55402848 | MS.gene59762:intron | 25.0% |
| ! | ATATGAAAGGAATATAAGCA+TGG | + | chr8.3:55401974-55401993 | MS.gene59762:CDS | 25.0% |
| ! | ATTTGTCTAATCAATGACAT+TGG | + | chr8.3:55403151-55403170 | MS.gene59762:intron | 25.0% |
| ! | CAACAATGAAGAAAGAAATT+TGG | + | chr8.3:55401947-55401966 | MS.gene59762:CDS | 25.0% |
| ! | GGACTTCATTATAATGTTAA+TGG | + | chr8.3:55402269-55402288 | MS.gene59762:CDS | 25.0% |
| ! | GTTATTACTAAAAACCATGT+TGG | - | chr8.3:55403937-55403956 | None:intergenic | 25.0% |
| ! | GTTATTGTTAAAAACCATGT+CGG | - | chr8.3:55404147-55404166 | None:intergenic | 25.0% |
| ! | TACATGAATTCGTTACTAAT+AGG | + | chr8.3:55402683-55402702 | MS.gene59762:intron | 25.0% |
| ! | TATGAAAGGAATATAAGCAT+GGG | + | chr8.3:55401975-55401994 | MS.gene59762:CDS | 25.0% |
| !! | CAATAACCAACCAAAATTTT+TGG | + | chr8.3:55404433-55404452 | MS.gene59762:CDS | 25.0% |
| !! | CATTTTATCTTGAAGATTCT+TGG | - | chr8.3:55403520-55403539 | None:intergenic | 25.0% |
| !! | GGAAACAAATCCAAAAATTT+TGG | - | chr8.3:55404446-55404465 | None:intergenic | 25.0% |
| !! | TATGATGTTGATGGAAATAA+TGG | + | chr8.3:55403681-55403700 | MS.gene59762:CDS | 25.0% |
| !!! | ACAAATCCAAAAATTTTGGT+TGG | - | chr8.3:55404442-55404461 | None:intergenic | 25.0% |
| !!! | CCTTATTTTACTAAAATCAG+GGG | - | chr8.3:55403481-55403500 | None:intergenic | 25.0% |
| !!! | CTCCTTATTTTACTAAAATC+AGG | - | chr8.3:55403483-55403502 | None:intergenic | 25.0% |
| !!! | TTTTCGTATTTTGTTTCCTT+TGG | + | chr8.3:55403214-55403233 | MS.gene59762:intron | 25.0% |
| AAAAAATGCTCCAAGAAACA+AGG | + | chr8.3:55404538-55404557 | MS.gene59762:CDS | 30.0% | |
| AAACCGTAACATATTTGAAC+AGG | + | chr8.3:55403286-55403305 | MS.gene59762:intron | 30.0% | |
| AAATAACCAACCTCAATGTA+TGG | + | chr8.3:55403878-55403897 | MS.gene59762:CDS | 30.0% | |
| AACACGTTTATATTGTCCAA+AGG | - | chr8.3:55403233-55403252 | None:intergenic | 30.0% | |
| ATATATCATACACGAGTCAT+GGG | - | chr8.3:55402744-55402763 | None:intergenic | 30.0% | |
| ATATTTGAACAGGTTTCCTT+TGG | + | chr8.3:55403296-55403315 | MS.gene59762:intron | 30.0% | |
| CAAAATCTATACATTGAGGT+TGG | - | chr8.3:55403815-55403834 | None:intergenic | 30.0% | |
| CAATAATCAACCTCAACATT+TGG | + | chr8.3:55404226-55404245 | MS.gene59762:CDS | 30.0% | |
| CAATGAAGAAAGAAATTTGG+AGG | + | chr8.3:55401950-55401969 | MS.gene59762:CDS | 30.0% | |
| CATCTGAAAATCTTCAACAT+TGG | + | chr8.3:55402186-55402205 | MS.gene59762:CDS | 30.0% | |
| CATTATAATGAAGTCCTTGT+TGG | - | chr8.3:55402265-55402284 | None:intergenic | 30.0% | |
| CCAAATGGAAGCAATAATAA+TGG | + | chr8.3:55403627-55403646 | MS.gene59762:CDS | 30.0% | |
| CCATTATTATTGCTTCCATT+TGG | - | chr8.3:55403630-55403649 | None:intergenic | 30.0% | |
| CCATTTGGAAAAAAAGTTGA+AGG | + | chr8.3:55404395-55404414 | MS.gene59762:CDS | 30.0% | |
| CTCATGATCTAAAAAAGGAT+TGG | + | chr8.3:55403418-55403437 | MS.gene59762:CDS | 30.0% | |
| GAAACCTCATGATCTAAAAA+AGG | + | chr8.3:55403413-55403432 | MS.gene59762:CDS | 30.0% | |
| GAAATTTGGAGGAATATGAA+AGG | + | chr8.3:55401961-55401980 | MS.gene59762:CDS | 30.0% | |
| GAATATAAGCATGGGTATTA+TGG | + | chr8.3:55401983-55402002 | MS.gene59762:CDS | 30.0% | |
| GGAATTGAAAAATCTTCGTA+AGG | + | chr8.3:55402004-55402023 | MS.gene59762:CDS | 30.0% | |
| GGTGTTAAAACTCAATTGTA+TGG | + | chr8.3:55402898-55402917 | MS.gene59762:intron | 30.0% | |
| GTTGTAATCCAAATCAAAGA+AGG | + | chr8.3:55402405-55402424 | MS.gene59762:CDS | 30.0% | |
| TAAAACGTTAGTGTCATGTT+TGG | - | chr8.3:55402486-55402505 | None:intergenic | 30.0% | |
| TAATAACCAACGTCAATGTA+TGG | + | chr8.3:55403950-55403969 | MS.gene59762:CDS | 30.0% | |
| TCTTGAACATTGTCTTTGAA+TGG | - | chr8.3:55403768-55403787 | None:intergenic | 30.0% | |
| TGTGTGTCTGTGTATATATT+GGG | + | chr8.3:55402992-55403011 | MS.gene59762:intron | 30.0% | |
| TTATTATTGCTTCCATTTGG+TGG | - | chr8.3:55403627-55403646 | None:intergenic | 30.0% | |
| TTCAAAGACAATGTTCAAGA+AGG | + | chr8.3:55403768-55403787 | MS.gene59762:CDS | 30.0% | |
| TTCTGTAAGGACAATTCATT+TGG | - | chr8.3:55404691-55404710 | None:intergenic | 30.0% | |
| TTGGTTATTGTTAACAACCA+TGG | - | chr8.3:55404078-55404097 | None:intergenic | 30.0% | |
| TTGTCATGTCTTATGACATT+TGG | + | chr8.3:55402383-55402402 | MS.gene59762:CDS | 30.0% | |
| ! | CATTTGGATTTGTTTCCATT+TGG | + | chr8.3:55404380-55404399 | MS.gene59762:CDS | 30.0% |
| !! | CCCCTGATTTTAGTAAAATA+AGG | + | chr8.3:55403478-55403497 | MS.gene59762:CDS | 30.0% |
| !! | TAAAAACCATATTGGTTCCA+TGG | - | chr8.3:55404277-55404296 | None:intergenic | 30.0% |
| !! | TTGCTTTCATTTTCTGGAAA+TGG | - | chr8.3:55404194-55404213 | None:intergenic | 30.0% |
| !! | TTTTTGGATTTGTTTCCATC+TGG | + | chr8.3:55404449-55404468 | MS.gene59762:CDS | 30.0% |
| !!! | CAATCCTTTTTTAGATCATG+AGG | - | chr8.3:55403420-55403439 | None:intergenic | 30.0% |
| !!! | CCTTCAACTTTTTTTCCAAA+TGG | - | chr8.3:55404398-55404417 | None:intergenic | 30.0% |
| !!! | CTTATCGGTTTTCCATTTTT+TGG | - | chr8.3:55402161-55402180 | None:intergenic | 30.0% |
| AAATCTTCAACATTGGTGGA+AGG | + | chr8.3:55402193-55402212 | MS.gene59762:CDS | 35.0% | |
| AAGTGTTTATGGAACCAACA+TGG | + | chr8.3:55403920-55403939 | MS.gene59762:CDS | 35.0% | |
| AATAACAACAGCGAAGTTAG+TGG | - | chr8.3:55403556-55403575 | None:intergenic | 35.0% | |
| ACAAATCCAAATGTTGAGGT+TGG | - | chr8.3:55404373-55404392 | None:intergenic | 35.0% | |
| ACACATTATCAGGACTTCTA+AGG | - | chr8.3:55402967-55402986 | None:intergenic | 35.0% | |
| ACTCTTCAATACCTTGTCTA+TGG | - | chr8.3:55402084-55402103 | None:intergenic | 35.0% | |
| AGATAAAATGTCTGCACAAG+AGG | + | chr8.3:55403530-55403549 | MS.gene59762:CDS | 35.0% | |
| AGATCATGAGGTTTCCTATA+GGG | - | chr8.3:55403408-55403427 | None:intergenic | 35.0% | |
| ATTGAGTAACACCATAGACA+AGG | + | chr8.3:55402070-55402089 | MS.gene59762:CDS | 35.0% | |
| CAATAACCAACCTCAACATT+TGG | + | chr8.3:55404364-55404383 | MS.gene59762:CDS | 35.0% | |
| CAATAACCAACCTCAATGTA+TGG | + | chr8.3:55404088-55404107 | MS.gene59762:CDS | 35.0% | |
| CAATAACCAACGTCAATGTA+TGG | + | chr8.3:55404160-55404179 | MS.gene59762:CDS | 35.0% | |
| CACATTATCAGGACTTCTAA+GGG | - | chr8.3:55402966-55402985 | None:intergenic | 35.0% | |
| CCATAAACACTTTCTTGGAA+TGG | - | chr8.3:55403912-55403931 | None:intergenic | 35.0% | |
| CCATCTGGAAAAAATGTTCA+AGG | + | chr8.3:55404464-55404483 | MS.gene59762:CDS | 35.0% | |
| CCTTACAGAAATAACTCTTC+TGG | + | chr8.3:55404701-55404720 | MS.gene59762:CDS | 35.0% | |
| CGTAAGGAAGTAAAAAATCC+AGG | + | chr8.3:55402020-55402039 | MS.gene59762:CDS | 35.0% | |
| CTCCAAGAAACAAGGTTATT+AGG | + | chr8.3:55404546-55404565 | MS.gene59762:CDS | 35.0% | |
| CTGAAAATCTTCAACATTGG+TGG | + | chr8.3:55402189-55402208 | MS.gene59762:CDS | 35.0% | |
| GAACTCCTAAACACAACAAT+AGG | + | chr8.3:55402353-55402372 | MS.gene59762:CDS | 35.0% | |
| GACTCGTGTATGATATATCA+AGG | + | chr8.3:55402746-55402765 | MS.gene59762:intron | 35.0% | |
| GATATATCATACACGAGTCA+TGG | - | chr8.3:55402745-55402764 | None:intergenic | 35.0% | |
| GGAAACAAATCCAAATGTTG+AGG | - | chr8.3:55404377-55404396 | None:intergenic | 35.0% | |
| GGAGCAAAATCTATACATTG+AGG | - | chr8.3:55403819-55403838 | None:intergenic | 35.0% | |
| GTAACCAAATTAGCAGATTG+AGG | - | chr8.3:55404512-55404531 | None:intergenic | 35.0% | |
| GTGTGTGTCTGTGTATATAT+TGG | + | chr8.3:55402991-55403010 | MS.gene59762:intron | 35.0% | |
| TAAGGGAGACTAAAACATCA+CGG | - | chr8.3:55402949-55402968 | None:intergenic | 35.0% | |
| TAGATCATGAGGTTTCCTAT+AGG | - | chr8.3:55403409-55403428 | None:intergenic | 35.0% | |
| TCAACCTCAACATTTGGATT+TGG | + | chr8.3:55404232-55404251 | MS.gene59762:CDS | 35.0% | |
| TCCAGAAAATGAAAGCAACA+TGG | + | chr8.3:55404196-55404215 | MS.gene59762:CDS | 35.0% | |
| TGGTTCCATAAACACTTTCT+TGG | - | chr8.3:55403917-55403936 | None:intergenic | 35.0% | |
| TGTACGTACCTTCTTTGATT+TGG | - | chr8.3:55402416-55402435 | None:intergenic | 35.0% | |
| TTGGTTCCATTTCCATCAAA+TGG | + | chr8.3:55404047-55404066 | MS.gene59762:CDS | 35.0% | |
| ! | AACAGGTTTCCTTTGGAAAA+AGG | + | chr8.3:55403303-55403322 | MS.gene59762:intron | 35.0% |
| ! | ATTGAAGAGTATGCACAAGT+TGG | + | chr8.3:55402094-55402113 | MS.gene59762:CDS | 35.0% |
| ! | GATGTTGATGGAAATAATGG+AGG | + | chr8.3:55403684-55403703 | MS.gene59762:CDS | 35.0% |
| ! | TCAAGGACTGTTGCTTATAT+AGG | + | chr8.3:55402763-55402782 | MS.gene59762:intron | 35.0% |
| ! | TTGCTTCCATTTGCTAGAAA+TGG | - | chr8.3:55404332-55404351 | None:intergenic | 35.0% |
| ! | TTTTCAGATGCAGCACTTAT+CGG | - | chr8.3:55402176-55402195 | None:intergenic | 35.0% |
| !! | ATTCATCACAATGGGTTAAG+AGG | - | chr8.3:55402926-55402945 | None:intergenic | 35.0% |
| !! | CCAGAAGAGTTATTTCTGTA+AGG | - | chr8.3:55404704-55404723 | None:intergenic | 35.0% |
| !! | CCATTCCAAGAAAGTGTTTA+TGG | + | chr8.3:55403909-55403928 | MS.gene59762:CDS | 35.0% |
| !! | TATAGCATCGACATCTTTGA+TGG | - | chr8.3:55402603-55402622 | None:intergenic | 35.0% |
| !! | TTGGTTCCATTTCTAGCAAA+TGG | + | chr8.3:55404323-55404342 | MS.gene59762:CDS | 35.0% |
| !!! | ACCATGTTGCTTTCATTTTC+TGG | - | chr8.3:55404200-55404219 | None:intergenic | 35.0% |
| !!! | CCTTGAACATTTTTTCCAGA+TGG | - | chr8.3:55404467-55404486 | None:intergenic | 35.0% |
| AAGTGTCCATGGAACCAATA+TGG | + | chr8.3:55404268-55404287 | MS.gene59762:CDS | 40.0% | |
| AAGTGTTCATGGAACCAACA+TGG | + | chr8.3:55403992-55404011 | MS.gene59762:CDS | 40.0% | |
| ACACACACAGACACATTATC+AGG | - | chr8.3:55402977-55402996 | None:intergenic | 40.0% | |
| ACATCACGGATTCATCACAA+TGG | - | chr8.3:55402935-55402954 | None:intergenic | 40.0% | |
| ACCAAATCAACACAATGAGG+TGG | - | chr8.3:55403744-55403763 | None:intergenic | 40.0% | |
| CAATGTTCAAGAAGGCAACA+TGG | + | chr8.3:55403776-55403795 | MS.gene59762:CDS | 40.0% | |
| CATCACGGATTCATCACAAT+GGG | - | chr8.3:55402934-55402953 | None:intergenic | 40.0% | |
| CCAAATCCATACATTGACGT+TGG | - | chr8.3:55403959-55403978 | None:intergenic | 40.0% | |
| CCAAATCCATACATTGAGGT+TGG | - | chr8.3:55403887-55403906 | None:intergenic | 40.0% | |
| CCAAATTAGCAGATTGAGGT+AGG | - | chr8.3:55404508-55404527 | None:intergenic | 40.0% | |
| CCAACCTCAATGTATGGATT+TGG | + | chr8.3:55403884-55403903 | MS.gene59762:CDS | 40.0% | |
| CCAACGTCAATGTATGGATT+TGG | + | chr8.3:55403956-55403975 | MS.gene59762:CDS | 40.0% | |
| CCATGAACACTTTCTTGGAA+TGG | - | chr8.3:55403984-55404003 | None:intergenic | 40.0% | |
| CCCAAAACACAGAGAGAAAT+GGG | + | chr8.3:55402709-55402728 | MS.gene59762:intron | 40.0% | |
| CCTACCTCAATCTGCTAATT+TGG | + | chr8.3:55404505-55404524 | MS.gene59762:CDS | 40.0% | |
| CTATCATGTTCATTGTTGCC+TGG | - | chr8.3:55402041-55402060 | None:intergenic | 40.0% | |
| GACCAGGTAGTTCAAGTAAT+GGG | + | chr8.3:55403706-55403725 | MS.gene59762:CDS | 40.0% | |
| GGAACCAAATCAACACAATG+AGG | - | chr8.3:55403747-55403766 | None:intergenic | 40.0% | |
| GGAACCAAATCCAAATGTTG+AGG | - | chr8.3:55404239-55404258 | None:intergenic | 40.0% | |
| GGAACCAAATCCATACATTG+AGG | - | chr8.3:55403891-55403910 | None:intergenic | 40.0% | |
| GTGCTCCTATTGTTGTGTTT+AGG | - | chr8.3:55402361-55402380 | None:intergenic | 40.0% | |
| GTGCTTCCATTTGATGGAAA+TGG | - | chr8.3:55404056-55404075 | None:intergenic | 40.0% | |
| TCAAATGCGTTACCACCAAA+TGG | + | chr8.3:55403612-55403631 | MS.gene59762:CDS | 40.0% | |
| TCCCAAAACACAGAGAGAAA+TGG | + | chr8.3:55402708-55402727 | MS.gene59762:intron | 40.0% | |
| TCCTTTCGATAACCCAATAG+CGG | - | chr8.3:55403372-55403391 | None:intergenic | 40.0% | |
| TCTAGCAAATGGAAGCAACA+TGG | + | chr8.3:55404334-55404353 | MS.gene59762:CDS | 40.0% | |
| TGGTTCCATGAACACTTTCT+TGG | - | chr8.3:55403989-55404008 | None:intergenic | 40.0% | |
| ! | AAATCACCAGAAAGTGCACA+AGG | + | chr8.3:55401915-55401934 | MS.gene59762:CDS | 40.0% |
| ! | AACGTTTTATGCTTCGACAC+CGG | + | chr8.3:55402497-55402516 | MS.gene59762:intron | 40.0% |
| ! | ACCCATTTCTCTCTGTGTTT+TGG | - | chr8.3:55402713-55402732 | None:intergenic | 40.0% |
| ! | CCCATTTCTCTCTGTGTTTT+GGG | - | chr8.3:55402712-55402731 | None:intergenic | 40.0% |
| ! | GCAATAGTGAAGTACCAACA+AGG | + | chr8.3:55402248-55402267 | MS.gene59762:CDS | 40.0% |
| ! | GGCCTAATAACCTTGTTTCT+TGG | - | chr8.3:55404551-55404570 | None:intergenic | 40.0% |
| ! | TTAATAACCATGCTGCTTCC+AGG | - | chr8.3:55403858-55403877 | None:intergenic | 40.0% |
| !! | ACATGTCTAGGTGTCATTTG+AGG | + | chr8.3:55402557-55402576 | MS.gene59762:intron | 40.0% |
| !! | ATGCACAAGTTGGTAGATCT+TGG | + | chr8.3:55402104-55402123 | MS.gene59762:CDS | 40.0% |
| !! | CCATTCCAAGAAAGTGTTCA+TGG | + | chr8.3:55403981-55404000 | MS.gene59762:CDS | 40.0% |
| !! | CGTGCTGATGGATTTGTATA+TGG | + | chr8.3:55402128-55402147 | MS.gene59762:CDS | 40.0% |
| !! | TAAAAACCATGTCGGTTCCA+TGG | - | chr8.3:55404139-55404158 | None:intergenic | 40.0% |
| !! | TCCACCTCATTGTGTTGATT+TGG | + | chr8.3:55403740-55403759 | MS.gene59762:CDS | 40.0% |
| AAGAATGAAACCCAGCTAGG+TGG | - | chr8.3:55404649-55404668 | None:intergenic | 45.0% | |
| ACCATGGTGCTTCCATTTGA+TGG | - | chr8.3:55404062-55404081 | None:intergenic | 45.0% | |
| AGCTGGGTTTCATTCTTTGG+AGG | + | chr8.3:55404652-55404671 | MS.gene59762:CDS | 45.0% | |
| CAGCTAGGTGGCTATGATAA+GGG | - | chr8.3:55404637-55404656 | None:intergenic | 45.0% | |
| CCAAAGAATGAAACCCAGCT+AGG | - | chr8.3:55404652-55404671 | None:intergenic | 45.0% | |
| CCAACGTCAATGTATGGACT+TGG | + | chr8.3:55404304-55404323 | MS.gene59762:CDS | 45.0% | |
| CCAAGTCCATACATTGACGT+TGG | - | chr8.3:55404307-55404326 | None:intergenic | 45.0% | |
| CCAGGAACACTTGCTTGAAA+AGG | - | chr8.3:55403840-55403859 | None:intergenic | 45.0% | |
| CCATGGACACTTTCTTGGAA+TGG | - | chr8.3:55404122-55404141 | None:intergenic | 45.0% | |
| CCTAGCTGGGTTTCATTCTT+TGG | + | chr8.3:55404649-55404668 | MS.gene59762:CDS | 45.0% | |
| CTTATCATAGCCACCTAGCT+GGG | + | chr8.3:55404636-55404655 | MS.gene59762:CDS | 45.0% | |
| GGACCAGGTAGTTCAAGTAA+TGG | + | chr8.3:55403705-55403724 | MS.gene59762:CDS | 45.0% | |
| TCATGAGGTTTCCTATAGGG+TGG | - | chr8.3:55403405-55403424 | None:intergenic | 45.0% | |
| TCTTCACCTTGTGCACTTTC+TGG | - | chr8.3:55401924-55401943 | None:intergenic | 45.0% | |
| TGCCCATTACTTGAACTACC+TGG | - | chr8.3:55403711-55403730 | None:intergenic | 45.0% | |
| TGGCTATGATAAGGGCAATG+TGG | - | chr8.3:55404629-55404648 | None:intergenic | 45.0% | |
| TGGTACTTCACTATTGCAGC+AGG | - | chr8.3:55402245-55402264 | None:intergenic | 45.0% | |
| TGGTTCCATGGACACTTTCT+TGG | - | chr8.3:55404265-55404284 | None:intergenic | 45.0% | |
| TTATTAGGCCAATTGCCACC+AGG | + | chr8.3:55404561-55404580 | MS.gene59762:CDS | 45.0% | |
| TTGGGTTATCGAAAGGATCC+AGG | + | chr8.3:55403375-55403394 | MS.gene59762:CDS | 45.0% | |
| ! | GATGGAAATAATGGAGGACC+AGG | + | chr8.3:55403690-55403709 | MS.gene59762:CDS | 45.0% |
| ! | GCATCGACATCTTTGATGGA+AGG | - | chr8.3:55402599-55402618 | None:intergenic | 45.0% |
| ! | GGTGGAACACCTTTTTCCAA+AGG | - | chr8.3:55403315-55403334 | None:intergenic | 45.0% |
| !! | AAAAAGGTGTTCCACCACCA+TGG | + | chr8.3:55403319-55403338 | MS.gene59762:CDS | 45.0% |
| !! | CCATTCCAAGAAAGTGTCCA+TGG | + | chr8.3:55404119-55404138 | MS.gene59762:CDS | 45.0% |
| !! | CCTTTTCAAGCAAGTGTTCC+TGG | + | chr8.3:55403837-55403856 | MS.gene59762:CDS | 45.0% |
| !! | TCCATCAAATGGAAGCACCA+TGG | + | chr8.3:55404058-55404077 | MS.gene59762:CDS | 45.0% |
| !! | TCTTTGATGGAAGGAGTGTC+TGG | - | chr8.3:55402590-55402609 | None:intergenic | 45.0% |
| AAGTGTCCATGGAACCGACA+TGG | + | chr8.3:55404130-55404149 | MS.gene59762:CDS | 50.0% | |
| AAGTGTTCCTGGAAGCAGCA+TGG | + | chr8.3:55403848-55403867 | MS.gene59762:CDS | 50.0% | |
| CAAGGGGAGATGAAGAATGG+TGG | + | chr8.3:55403346-55403365 | MS.gene59762:CDS | 50.0% | |
| CACCATTCTTCATCTCCCCT+TGG | - | chr8.3:55403348-55403367 | None:intergenic | 50.0% | |
| CCAGCTAGGTGGCTATGATA+AGG | - | chr8.3:55404638-55404657 | None:intergenic | 50.0% | |
| CCTTATCATAGCCACCTAGC+TGG | + | chr8.3:55404635-55404654 | MS.gene59762:CDS | 50.0% | |
| CGGTTCCATGGACACTTTCT+TGG | - | chr8.3:55404127-55404146 | None:intergenic | 50.0% | |
| GAAGAATGGTGGCCGCTATT+GGG | + | chr8.3:55403357-55403376 | MS.gene59762:CDS | 50.0% | |
| GCCGCTATTGGGTTATCGAA+AGG | + | chr8.3:55403368-55403387 | MS.gene59762:CDS | 50.0% | |
| GTAGATCTTGGTCGTGCTGA+TGG | + | chr8.3:55402116-55402135 | MS.gene59762:CDS | 50.0% | |
| TGAAGAATGGTGGCCGCTAT+TGG | + | chr8.3:55403356-55403375 | MS.gene59762:CDS | 50.0% | |
| TGAGGTTTCCTATAGGGTGG+AGG | - | chr8.3:55403402-55403421 | None:intergenic | 50.0% | |
| AGAGCGAGGTACGTGGTTAC+TGG | + | chr8.3:55404584-55404603 | MS.gene59762:CDS | 55.0% | |
| ATCCAGGTCCTCCACCCTAT+AGG | + | chr8.3:55403391-55403410 | MS.gene59762:CDS | 55.0% | |
| GGCCAAGGGGAGATGAAGAA+TGG | + | chr8.3:55403343-55403362 | MS.gene59762:CDS | 55.0% | |
| TTCCTATAGGGTGGAGGACC+TGG | - | chr8.3:55403396-55403415 | None:intergenic | 55.0% | |
| ! | AAGGTGTTCCACCACCATGG+TGG | + | chr8.3:55403322-55403341 | MS.gene59762:CDS | 55.0% |
| AACCACGTACCTCGCTCTCC+TGG | - | chr8.3:55404582-55404601 | None:intergenic | 60.0% | |
| CAATTGCCACCAGGAGAGCG+AGG | + | chr8.3:55404570-55404589 | MS.gene59762:CDS | 60.0% | |
| CTCGCTCTCCTGGTGGCAAT+TGG | - | chr8.3:55404572-55404591 | None:intergenic | 60.0% | |
| TCATCTCCCCTTGGCCACCA+TGG | - | chr8.3:55403339-55403358 | None:intergenic | 60.0% | |
| TCCACCACCATGGTGGCCAA+GGG | + | chr8.3:55403329-55403348 | MS.gene59762:CDS | 60.0% | |
| TTCCACCACCATGGTGGCCA+AGG | + | chr8.3:55403328-55403347 | MS.gene59762:CDS | 60.0% | |
| CACCAGGAGAGCGAGGTACG+TGG | + | chr8.3:55404577-55404596 | MS.gene59762:CDS | 65.0% | |
| CACGTACCTCGCTCTCCTGG+TGG | - | chr8.3:55404579-55404598 | None:intergenic | 65.0% | |
| CCACCACCATGGTGGCCAAG+GGG | + | chr8.3:55403330-55403349 | MS.gene59762:CDS | 65.0% | |
| TCTCCCCTTGGCCACCATGG+TGG | - | chr8.3:55403336-55403355 | None:intergenic | 65.0% | |
| CCCCTTGGCCACCATGGTGG+TGG | - | chr8.3:55403333-55403352 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 55401888 | 55404730 | 55401888 | ID=MS.gene59762 |
| chr8.3 | mRNA | 55401888 | 55404730 | 55401888 | ID=MS.gene59762.t1;Parent=MS.gene59762 |
| chr8.3 | exon | 55401888 | 55402426 | 55401888 | ID=MS.gene59762.t1.exon1;Parent=MS.gene59762.t1 |
| chr8.3 | CDS | 55401888 | 55402426 | 55401888 | ID=cds.MS.gene59762.t1;Parent=MS.gene59762.t1 |
| chr8.3 | exon | 55403308 | 55404730 | 55403308 | ID=MS.gene59762.t1.exon2;Parent=MS.gene59762.t1 |
| chr8.3 | CDS | 55403308 | 55404730 | 55403308 | ID=cds.MS.gene59762.t1;Parent=MS.gene59762.t1 |
| Gene Sequence |
| Protein sequence |
