AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59812

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59812.t1 MTR_8g044220 91.443 409 18 3 62 469 47 439 0.0 762
MS.gene59812.t1 MTR_6g012450 37.500 400 181 13 118 468 115 494 3.97e-64 215
MS.gene59812.t1 MTR_7g010950 35.821 402 193 14 110 468 106 485 3.51e-61 207
MS.gene59812.t1 MTR_4g082060 36.220 381 175 13 127 467 111 463 8.66e-61 206
MS.gene59812.t1 MTR_3g435480 35.446 426 201 15 84 468 72 464 1.31e-58 200
MS.gene59812.t1 MTR_7g086780 36.939 379 167 11 123 469 84 422 2.72e-57 195
MS.gene59812.t1 MTR_5g041380 31.926 379 151 12 101 469 90 371 2.97e-43 157
MS.gene59812.t1 MTR_5g041400 31.818 374 158 11 101 469 82 363 2.58e-42 154
MS.gene59812.t1 MTR_6g027450 33.750 320 149 12 86 364 32 329 2.83e-37 139
MS.gene59812.t1 MTR_6g027460 31.461 267 120 8 86 306 39 288 1.09e-33 130
MS.gene59812.t1 MTR_2g016030 75.000 64 16 0 128 191 37 100 1.17e-31 119
MS.gene59812.t1 MTR_5g041420 64.198 81 29 0 113 193 113 193 6.14e-31 122
MS.gene59812.t1 MTR_5g041530 62.338 77 29 0 115 191 117 193 4.20e-29 118
MS.gene59812.t1 MTR_5g041530 32.632 190 71 9 292 469 237 381 4.58e-13 70.9
MS.gene59812.t1 MTR_3g091820 59.701 67 27 0 127 193 32 98 2.54e-24 103
MS.gene59812.t1 MTR_4g022370 67.797 59 19 0 134 192 78 136 2.70e-24 104
MS.gene59812.t1 MTR_2g059540 74.000 50 13 0 137 186 30 79 6.02e-24 99.8
MS.gene59812.t1 MTR_4g109980 71.698 53 15 0 136 188 38 90 1.46e-23 101
MS.gene59812.t1 MTR_8g079060 44.211 95 46 2 138 232 29 116 1.62e-23 99.0
MS.gene59812.t1 MTR_8g027295 61.290 62 24 0 133 194 19 80 2.16e-23 99.8
MS.gene59812.t1 MTR_2g096740 56.944 72 31 0 126 197 50 121 2.82e-23 99.8
MS.gene59812.t1 MTR_2g096740 56.944 72 31 0 126 197 65 136 3.73e-23 99.8
MS.gene59812.t1 MTR_4g063780 66.102 59 20 0 134 192 71 129 5.36e-23 100
MS.gene59812.t1 MTR_2g093220 63.333 60 22 0 133 192 35 94 7.30e-23 98.6
MS.gene59812.t1 MTR_8g479350 72.222 54 15 0 138 191 68 121 9.03e-23 99.4
MS.gene59812.t1 MTR_8g015840 69.231 52 16 0 138 189 20 71 1.74e-22 95.9
MS.gene59812.t1 MTR_8g068210 46.914 81 43 0 112 192 6 86 1.86e-22 98.6
MS.gene59812.t1 MTR_1g077600 56.452 62 27 0 132 193 37 98 5.40e-22 95.9
MS.gene59812.t1 MTR_1g077600 56.452 62 27 0 132 193 37 98 6.72e-22 95.9
MS.gene59812.t1 MTR_7g059400 69.811 53 16 0 140 192 78 130 6.97e-22 97.1
MS.gene59812.t1 MTR_7g024670 69.811 53 16 0 140 192 79 131 1.50e-21 96.3
MS.gene59812.t1 MTR_5g031440 65.455 55 19 0 134 188 39 93 2.62e-21 95.1
MS.gene59812.t1 MTR_4g088580 67.925 53 17 0 140 192 57 109 3.23e-21 95.5
MS.gene59812.t1 MTR_4g461080 60.000 65 25 1 127 190 17 81 6.87e-21 92.8
MS.gene59812.t1 MTR_1g056810 50.000 76 37 1 133 207 6 81 1.80e-20 91.7
MS.gene59812.t1 MTR_3g077750 53.521 71 32 1 119 188 41 111 2.12e-20 92.4
MS.gene59812.t1 MTR_4g089095 65.455 55 18 1 138 192 50 103 2.46e-20 91.7
MS.gene59812.t1 MTR_4g089095 65.455 55 18 1 138 192 16 69 3.16e-20 90.5
MS.gene59812.t1 MTR_2g014170 68.000 50 16 0 137 186 44 93 4.36e-20 91.3
MS.gene59812.t1 MTR_3g090430 64.151 53 19 0 140 192 53 105 5.13e-20 91.3
MS.gene59812.t1 MTR_2g014060 68.000 50 16 0 140 189 27 76 7.10e-20 90.9
MS.gene59812.t1 MTR_2g013370 66.038 53 17 1 140 192 48 99 8.41e-20 89.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59812.t1 AT5G39660 36.562 413 182 16 89 468 91 456 1.92e-60 204
MS.gene59812.t1 AT5G39660 36.562 413 182 16 89 468 91 456 1.92e-60 204
MS.gene59812.t1 AT5G39660 36.562 413 182 16 89 468 91 456 1.92e-60 204
MS.gene59812.t1 AT3G47500 35.891 404 175 15 114 469 81 448 1.64e-55 191
MS.gene59812.t1 AT1G69570 29.762 420 167 13 89 469 67 397 1.10e-42 155
MS.gene59812.t1 AT1G26790 29.189 370 164 15 115 469 86 372 1.72e-35 135
MS.gene59812.t1 AT5G62430 44.516 155 77 3 103 255 20 167 1.45e-34 131
MS.gene59812.t1 AT5G62430 42.718 103 40 4 375 469 207 298 2.69e-12 67.8
MS.gene59812.t1 AT1G29160 69.863 73 22 0 119 191 43 115 1.81e-33 124
MS.gene59812.t1 AT2G34140 76.667 60 14 0 132 191 52 111 1.46e-31 119
MS.gene59812.t1 AT5G60850 75.000 56 14 0 138 193 51 106 1.86e-25 106
MS.gene59812.t1 AT3G55370 68.333 60 19 0 134 193 72 131 2.77e-24 103
MS.gene59812.t1 AT1G51700 45.714 105 52 2 117 217 12 115 2.81e-24 100
MS.gene59812.t1 AT3G55370 68.333 60 19 0 134 193 72 131 3.65e-24 103
MS.gene59812.t1 AT3G55370 68.333 60 19 0 134 193 117 176 3.98e-24 103
MS.gene59812.t1 AT2G37590 65.000 60 21 0 134 193 85 144 8.64e-24 102
MS.gene59812.t1 AT3G45610 50.633 79 34 1 120 193 17 95 1.26e-23 99.8
MS.gene59812.t1 AT2G28810 67.241 58 19 0 132 189 71 128 1.55e-23 101
MS.gene59812.t1 AT2G28810 67.241 58 19 0 132 189 88 145 2.53e-23 100
MS.gene59812.t1 AT5G65590 51.685 89 40 1 105 193 11 96 2.79e-23 100
MS.gene59812.t1 AT5G60200 61.667 60 23 0 134 193 51 110 3.65e-23 99.0
MS.gene59812.t1 AT4G38000 63.636 66 20 2 137 202 40 101 4.44e-23 98.2
MS.gene59812.t1 AT3G50410 50.000 80 30 1 123 192 5 84 6.81e-23 97.8
MS.gene59812.t1 AT3G21270 69.811 53 16 0 138 190 29 81 7.39e-23 96.7
MS.gene59812.t1 AT1G07640 69.091 55 17 0 138 192 21 75 7.55e-23 98.2
MS.gene59812.t1 AT1G07640 69.091 55 17 0 138 192 77 131 1.44e-22 98.6
MS.gene59812.t1 AT4G24060 56.061 66 29 0 127 192 42 107 1.67e-22 98.6
MS.gene59812.t1 AT1G07640 69.091 55 17 0 138 192 85 139 1.75e-22 98.6
MS.gene59812.t1 AT3G61850 60.656 61 24 0 133 193 57 117 2.13e-22 97.4
MS.gene59812.t1 AT3G61850 60.656 61 24 0 133 193 57 117 2.13e-22 97.4
MS.gene59812.t1 AT3G61850 60.656 61 24 0 133 193 69 129 2.29e-22 97.4
MS.gene59812.t1 AT5G02460 66.102 59 20 0 134 192 91 149 2.51e-22 99.0
MS.gene59812.t1 AT3G61850 60.656 61 24 0 133 193 57 117 3.24e-22 97.4
MS.gene59812.t1 AT3G61850 60.656 61 24 0 133 193 69 129 3.89e-22 97.4
MS.gene59812.t1 AT1G64620 61.667 60 23 0 127 186 38 97 4.73e-22 97.4
MS.gene59812.t1 AT4G00940 50.000 78 39 0 133 210 63 140 7.69e-22 95.9
MS.gene59812.t1 AT4G00940 50.000 78 39 0 133 210 63 140 7.69e-22 95.9
MS.gene59812.t1 AT4G00940 50.000 78 39 0 133 210 63 140 7.69e-22 95.9
MS.gene59812.t1 AT2G28510 68.519 54 17 0 140 193 50 103 1.53e-21 95.1
MS.gene59812.t1 AT5G66940 53.623 69 24 1 124 192 26 86 2.38e-21 92.8
MS.gene59812.t1 AT1G47655 69.388 49 15 0 138 186 29 77 3.52e-21 92.0
MS.gene59812.t1 AT1G28310 65.455 55 19 0 138 192 27 81 4.05e-21 94.4
MS.gene59812.t1 AT4G21050 44.944 89 47 1 125 211 11 99 5.70e-21 91.3
MS.gene59812.t1 AT1G28310 65.455 55 19 0 138 192 51 105 6.08e-21 94.0
MS.gene59812.t1 AT2G46590 64.151 53 19 0 133 185 63 115 4.16e-20 92.0
MS.gene59812.t1 AT2G46590 64.151 53 19 0 133 185 75 127 4.20e-20 92.0
MS.gene59812.t1 AT3G52440 54.286 70 29 1 140 206 27 96 9.16e-20 89.0
MS.gene59812.t1 AT3G52440 54.286 70 29 1 140 206 46 115 1.03e-19 89.4
MS.gene59812.t1 AT1G21340 61.111 54 21 0 140 193 40 93 1.55e-19 88.6
MS.gene59812.t1 AT5G62940 53.125 64 30 0 125 188 60 123 5.91e-19 89.0
MS.gene59812.t1 AT4G21040 67.347 49 16 0 140 188 27 75 1.12e-17 82.4
MS.gene59812.t1 AT4G21080 65.306 49 17 0 140 188 27 75 6.60e-17 80.9
MS.gene59812.t1 AT4G21030 50.769 65 25 2 126 183 2 66 2.88e-12 65.9

Find 114 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCGCTCCGGATCCTTTC+AGG 0.087266 8.3:-54756146 MS.gene59812:CDS
ATTGGGGCTGTATGCCAAAT+TGG 0.202565 8.3:-54756531 MS.gene59812:CDS
ATACAGTGAAGCAGAATATT+TGG 0.207890 8.3:-54756363 MS.gene59812:CDS
AAAACACTTCCTTTCATAAT+AGG 0.219092 8.3:+54756250 None:intergenic
TCTTTGAGAGCTCCTGCATC+TGG 0.234137 8.3:-54756763 MS.gene59812:CDS
TCCATTTGGCCAACCCAATT+TGG 0.234208 8.3:+54756517 None:intergenic
TTGCTTATTTCTACGCTTAC+CGG 0.293241 8.3:+54756969 None:intergenic
GGACTTGGAGTTATGTTATC+AGG 0.298157 8.3:+54756595 None:intergenic
TTGATTGTCAGTATCTCTTT+TGG 0.303295 8.3:+54757164 None:intergenic
TGTAATAGGTCGCCAACTTT+AGG 0.308169 8.3:-54756418 MS.gene59812:CDS
ACCGATGATACCTTCATATT+GGG 0.311213 8.3:-54756548 MS.gene59812:CDS
GGACAGCTGGTGGAGTAATT+AGG 0.315052 8.3:-54757008 MS.gene59812:CDS
TAAAGTTGGCGACCTATTAC+AGG 0.322171 8.3:+54756420 None:intergenic
TACCGATGATACCTTCATAT+TGG 0.330517 8.3:-54756549 MS.gene59812:CDS
CTGATTTATAGTACTGAGTT+TGG 0.334222 8.3:-54759012 MS.gene59812:CDS
ATTTATGGTGCAGGTGCAGC+TGG 0.360597 8.3:-54759236 MS.gene59812:intron
GAACTCTTAGCAGCCTCTTC+CGG 0.361876 8.3:+54756313 None:intergenic
AGCTCCTGCATCTGGGGAAA+TGG 0.365024 8.3:-54756755 MS.gene59812:CDS
GCCATCATGGTTGCAGGACT+TGG 0.367306 8.3:+54756580 None:intergenic
TTGTGGATTAGCTTGTTTGC+TGG 0.369067 8.3:+54757278 None:intergenic
GCCAAATTGGGTTGGCCAAA+TGG 0.379899 8.3:-54756518 MS.gene59812:CDS
GTGGTACTTGTTCCTGTAAT+AGG 0.381639 8.3:-54756432 MS.gene59812:CDS
CTAACGATAATTCTTCCATT+TGG 0.399422 8.3:+54756503 None:intergenic
GTCCCTTGTGCTTGTGATGC+CGG 0.401926 8.3:-54759037 MS.gene59812:CDS
ATGGAAGAATTATCGTTAGT+TGG 0.407541 8.3:-54756499 MS.gene59812:CDS
ATTAGTTCTATGAACTGCTT+TGG 0.409555 8.3:+54757200 None:intergenic
GTACCGGTATTGTACATGTT+TGG 0.410276 8.3:+54757237 None:intergenic
GTAATTAGGAATGTTCCTAT+TGG 0.410965 8.3:-54756994 MS.gene59812:CDS
CGAGAACTTGCATTTGACTT+AGG 0.412589 8.3:+54756214 None:intergenic
CTACGCTTACCGGCTCCAAT+AGG 0.417710 8.3:+54756979 None:intergenic
GGACACGGCAGAACCTTGTC+TGG 0.427129 8.3:+54757123 None:intergenic
CTTTGAGAGCTCCTGCATCT+GGG 0.427130 8.3:-54756762 MS.gene59812:CDS
CAAACTCAGTACTATAAATC+AGG 0.430293 8.3:+54759013 None:intergenic
CATTCCATCCCCTTCATCTT+CGG 0.433325 8.3:-54756461 MS.gene59812:CDS
GTAACGATGGGCGGAGGCTG+CGG 0.434920 8.3:-54759786 None:intergenic
TACAGTGAAGCAGAATATTT+GGG 0.435846 8.3:-54756362 MS.gene59812:CDS
GTTTCTACCGATTCACTAAG+AGG 0.436362 8.3:+54756868 None:intergenic
CTATGAACTGCTTTGGTCAC+CGG 0.437272 8.3:+54757207 None:intergenic
GTGTCCTCGCTGCAATAGTT+TGG 0.447623 8.3:-54757106 MS.gene59812:CDS
GACTTATCCATGTTGGAATC+CGG 0.451018 8.3:-54756629 MS.gene59812:CDS
CAATACCGGTACTTTGAAAC+CGG 0.464327 8.3:-54757226 MS.gene59812:CDS
TTGGGGCTGTATGCCAAATT+GGG 0.476387 8.3:-54756530 MS.gene59812:CDS
AACTATCAGAATTAATGATC+CGG 0.479510 8.3:-54756332 MS.gene59812:CDS
TGCCAGAGGTATTGGACAGC+TGG 0.480992 8.3:-54757021 MS.gene59812:CDS
CACACTTTCCTGAAAGGATC+CGG 0.481530 8.3:+54756138 None:intergenic
CCGGAGCGAGAGAAAGCAGC+AGG 0.481752 8.3:+54756157 None:intergenic
GGCTGTATGCCAAATTGGGT+TGG 0.482555 8.3:-54756526 MS.gene59812:CDS
ATTATTACTCTGCTCCTCCA+TGG 0.483782 8.3:-54756651 MS.gene59812:CDS
TCTACCGCCATCATGGTTGC+AGG 0.486792 8.3:+54756574 None:intergenic
GCGGAGTTGTCACTCCGGCC+TGG 0.488597 8.3:-54759764 MS.gene59812:CDS
TACTCCATTTCCCCAGATGC+AGG 0.496891 8.3:+54756751 None:intergenic
TCCACGTTGTTCACAACGCC+AGG 0.500222 8.3:+54759746 None:intergenic
GAAATGGAGTATTCAGAAAG+TGG 0.502422 8.3:-54756739 MS.gene59812:CDS
TTAGGAAAACATTGTAGAGA+TGG 0.504456 8.3:-54756400 MS.gene59812:CDS
AGGAGCTCTCAAAGAAGAGC+TGG 0.506237 8.3:+54756771 None:intergenic
GGAAGTTCCTCTTAGTGAAT+CGG 0.506714 8.3:-54756875 MS.gene59812:CDS
AGAAACTGTGTTAAATCTCA+AGG 0.509219 8.3:-54756851 MS.gene59812:CDS
AGGCTGCTAAGAGTTCTATA+TGG 0.510382 8.3:-54756306 MS.gene59812:CDS
ACTAAGAGGAACTTCCTCCT+TGG 0.511294 8.3:+54756882 None:intergenic
CTCCATGGACTTATCCATGT+TGG 0.511657 8.3:-54756636 MS.gene59812:CDS
CCTGCTGCTTTCTCTCGCTC+CGG 0.514923 8.3:-54756157 MS.gene59812:CDS
GGATGGGTAACGATGGGCGG+AGG 0.516937 8.3:-54759792 None:intergenic
CACCAGCTGTCCAATACCTC+TGG 0.521554 8.3:+54757019 None:intergenic
CAGAATTAATGATCCGGAAG+AGG 0.524329 8.3:-54756326 MS.gene59812:CDS
GGTCACCGGTTTCAAAGTAC+CGG 0.526533 8.3:+54757221 None:intergenic
CACTGCTAGCCGAAGATGAA+GGG 0.530871 8.3:+54756452 None:intergenic
AGGAATGTTCCTATTGGAGC+CGG 0.533831 8.3:-54756988 MS.gene59812:CDS
GGCATACAGCCCCAATATGA+AGG 0.540474 8.3:+54756538 None:intergenic
ACGATGGGCGGAGGCTGCGG+CGG 0.545921 8.3:-54759783 MS.gene59812:CDS
TTAGTTGGATCTGCGTTCAA+CGG 0.546446 8.3:-54756484 MS.gene59812:CDS
TTGGAATCTATGTGTATGAC+AGG 0.546648 8.3:+54756901 None:intergenic
CCACTGCTAGCCGAAGATGA+AGG 0.549382 8.3:+54756451 None:intergenic
TATGGAGCGGACAAGAATGC+TGG 0.551566 8.3:-54758986 MS.gene59812:intron
ATTCCAAACATGTACAATAC+CGG 0.552268 8.3:-54757240 MS.gene59812:CDS
CGGTACTTCTACCGCCATCA+TGG 0.556673 8.3:+54756567 None:intergenic
TTTGAGAGCTCCTGCATCTG+GGG 0.558983 8.3:-54756761 MS.gene59812:CDS
TAATAATGAAGTGAATGTAA+AGG 0.559539 8.3:+54756667 None:intergenic
TTATCAGGCTTAAATGCCAC+CGG 0.562271 8.3:+54756610 None:intergenic
ATATTACACACTTTCCTGAA+AGG 0.568365 8.3:+54756132 None:intergenic
TCCAAGTCCTGCAACCATGA+TGG 0.568626 8.3:-54756581 MS.gene59812:CDS
TGTCATACACATAGATTCCA+AGG 0.569094 8.3:-54756899 MS.gene59812:CDS
TATGACAGGTACTGCATCAA+GGG 0.571285 8.3:+54756915 None:intergenic
CAGAACAAACCTATTATGAA+AGG 0.575243 8.3:-54756259 MS.gene59812:CDS
AAACTATTGCAGCGAGGACA+CGG 0.577128 8.3:+54757108 None:intergenic
CGTTGTTCACAACGCCAGGC+CGG 0.577874 8.3:+54759750 None:intergenic
ATAGTATTAGCATCTTCTTG+TGG 0.578337 8.3:+54757261 None:intergenic
GAAAGTGGAATAGAGCATGT+TGG 0.578755 8.3:-54756724 MS.gene59812:CDS
ACTTTGACACCACAATGCAA+TGG 0.588024 8.3:-54756697 MS.gene59812:CDS
CGTGGATGGGTAACGATGGG+CGG 0.591496 8.3:-54759795 None:intergenic
TTCCAACATGGATAAGTCCA+TGG 0.593931 8.3:+54756634 None:intergenic
GTATGACAGGTACTGCATCA+AGG 0.597457 8.3:+54756914 None:intergenic
CCCCAATATGAAGGTATCAT+CGG 0.600247 8.3:+54756547 None:intergenic
TTTATGGTGCAGGTGCAGCT+GGG 0.603256 8.3:-54759235 MS.gene59812:intron
CTAGCCGAAGATGAAGGGGA+TGG 0.608686 8.3:+54756457 None:intergenic
CCTTCATCTTCGGCTAGCAG+TGG 0.611094 8.3:-54756451 MS.gene59812:CDS
CAGAGGTATTGGACAGCTGG+TGG 0.613246 8.3:-54757018 MS.gene59812:CDS
TCAGTACTATAAATCAGGAC+CGG 0.617385 8.3:+54759018 None:intergenic
ATTACAATGTTAACCAACCA+AGG 0.617440 8.3:-54757059 MS.gene59812:CDS
GGACTCTTCTACTGTCAAAG+AGG 0.625654 8.3:-54756809 MS.gene59812:CDS
GAAACTGTGTTAAATCTCAA+GGG 0.626874 8.3:-54756850 MS.gene59812:CDS
GGAATTAAGCCATTGCATTG+TGG 0.632188 8.3:+54756688 None:intergenic
CCGATGATACCTTCATATTG+GGG 0.633107 8.3:-54756547 MS.gene59812:CDS
ACTGCTAGCCGAAGATGAAG+GGG 0.636553 8.3:+54756453 None:intergenic
TGAACTTGACAATTCTGCAA+AGG 0.639240 8.3:+54756943 None:intergenic
AATGCCACCGGATTCCAACA+TGG 0.642061 8.3:+54756622 None:intergenic
GGACCGGCATCACAAGCACA+AGG 0.647990 8.3:+54759034 None:intergenic
CGGAGCGAGAGAAAGCAGCA+GGG 0.655440 8.3:+54756158 None:intergenic
TTATCCATGTTGGAATCCGG+TGG 0.657026 8.3:-54756626 MS.gene59812:CDS
CTGCGGCGGAGTTGTCACTC+CGG 0.671641 8.3:-54759769 MS.gene59812:CDS
AAGTCCTGCAACCATGATGG+CGG 0.675765 8.3:-54756578 MS.gene59812:CDS
GACCGGCATCACAAGCACAA+GGG 0.701951 8.3:+54759035 None:intergenic
GTCTCCAAACTATTGCAGCG+AGG 0.702604 8.3:+54757102 None:intergenic
CAACATGGATAAGTCCATGG+AGG 0.737932 8.3:+54756637 None:intergenic
CATACACATAGATTCCAAGG+AGG 0.765853 8.3:-54756896 MS.gene59812:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAAATGAAATATGTT+AGG - chr8.3:54758121-54758140 MS.gene59812:intron 10.0%
!! AATATGAAAAATAAAATTCT+GGG + chr8.3:54757561-54757580 None:intergenic 10.0%
!! TATGTTAATGTAATAAAATT+TGG - chr8.3:54756308-54756327 MS.gene59812:CDS 10.0%
!!! AATGAACTTTTAAAAATAAA+GGG - chr8.3:54756231-54756250 MS.gene59812:CDS 10.0%
!! ATATGTAAGAAAGATAAAAA+AGG + chr8.3:54757448-54757467 None:intergenic 15.0%
!! CAATATGAAAAATAAAATTC+TGG + chr8.3:54757562-54757581 None:intergenic 15.0%
!!! ATAAAAACCATTGATTTAAT+TGG - chr8.3:54756208-54756227 MS.gene59812:CDS 15.0%
!!! ATCTTTCTTACATATTTTTT+TGG - chr8.3:54757453-54757472 MS.gene59812:intron 15.0%
!!! ATTAAATCAATGGTTTTTAT+CGG + chr8.3:54756208-54756227 None:intergenic 15.0%
!!! GAATGAACTTTTAAAAATAA+AGG - chr8.3:54756230-54756249 MS.gene59812:CDS 15.0%
!!! TTTGAAAAAGTCATTATTTT+CGG - chr8.3:54758439-54758458 MS.gene59812:intron 15.0%
!!! TTTTTACCATTAGATTAAAA+AGG + chr8.3:54757070-54757089 None:intergenic 15.0%
!! AATCAAACTATAAATCTAAG+TGG + chr8.3:54756404-54756423 None:intergenic 20.0%
!! AATTTATGAAAGTTAGATGT+TGG - chr8.3:54756713-54756732 MS.gene59812:CDS 20.0%
!! ATCAAACTATAAATCTAAGT+GGG + chr8.3:54756403-54756422 None:intergenic 20.0%
!! ATTTATGAAAGTTAGATGTT+GGG - chr8.3:54756714-54756733 MS.gene59812:CDS 20.0%
!! CTTGTATAATAATGAATGTT+TGG - chr8.3:54757655-54757674 MS.gene59812:intron 20.0%
!! TAATAATGAAGTGAATGTAA+AGG + chr8.3:54759251-54759270 None:intergenic 20.0%
!! TAATCAAACAGTTAAAGAAT+AGG + chr8.3:54758218-54758237 None:intergenic 20.0%
!! TCATTGAAATAAAATTCCAT+AGG - chr8.3:54756983-54757002 MS.gene59812:CDS 20.0%
!! TGACATGAAAAATGTTAAAT+TGG - chr8.3:54757874-54757893 MS.gene59812:intron 20.0%
!!! TAATGACTTTTTCAAATTAG+CGG + chr8.3:54758435-54758454 None:intergenic 20.0%
!!! TATCAATGAGTTATAACTTT+TGG - chr8.3:54758498-54758517 MS.gene59812:intron 20.0%
!!! TCATTAATTCTGATAGTTTT+AGG + chr8.3:54759581-54759600 None:intergenic 20.0%
!!! TGTTTGATAATTTGTTTTGA+AGG - chr8.3:54757737-54757756 MS.gene59812:intron 20.0%
!!! TTTGGTATTGTTTAATTTGT+GGG - chr8.3:54758263-54758282 MS.gene59812:intron 20.0%
!!! TTTTGGTATTGTTTAATTTG+TGG - chr8.3:54758262-54758281 MS.gene59812:intron 20.0%
! AAAAATCAAATGACTCATGA+TGG - chr8.3:54757085-54757104 MS.gene59812:CDS 25.0%
! AAAACACTTCCTTTCATAAT+AGG + chr8.3:54759668-54759687 None:intergenic 25.0%
! AAAATCAAATGACTCATGAT+GGG - chr8.3:54757086-54757105 MS.gene59812:CDS 25.0%
! AAAGAAACAAAGAAAGAAAG+TGG + chr8.3:54757204-54757223 None:intergenic 25.0%
! AAATCAACGTTGTTAAATAG+TGG - chr8.3:54758313-54758332 MS.gene59812:intron 25.0%
! AAATTGGACCAAATTAATTG+AGG - chr8.3:54757890-54757909 MS.gene59812:intron 25.0%
! AACTATCAGAATTAATGATC+CGG - chr8.3:54759583-54759602 MS.gene59812:intron 25.0%
! ACTTTGTAAGTTACTTACTT+AGG + chr8.3:54757233-54757252 None:intergenic 25.0%
! GAATTATTTGTGTTTGAATC+TGG - chr8.3:54757816-54757835 MS.gene59812:intron 25.0%
! GTTCATTCCAATTAAATCAA+TGG + chr8.3:54756218-54756237 None:intergenic 25.0%
! TAACATAAACTAGAAAGCAA+CGG + chr8.3:54756295-54756314 None:intergenic 25.0%
! TTAAAAAGACAACTTGCATT+AGG + chr8.3:54758525-54758544 None:intergenic 25.0%
! TTTGAACTTAACATAACAAC+AGG + chr8.3:54758164-54758183 None:intergenic 25.0%
! TTTGTAATATCGATAGTTTG+TGG + chr8.3:54756523-54756542 None:intergenic 25.0%
!! AAAATGTTTAAGTTCTAGCT+AGG - chr8.3:54757704-54757723 MS.gene59812:intron 25.0%
!! ACATTTTTCATGTCAATTAC+TGG + chr8.3:54757869-54757888 None:intergenic 25.0%
!! AGATCTTTGGCTATAATTTT+CGG - chr8.3:54756856-54756875 MS.gene59812:CDS 25.0%
!! GTTGTTGTTCTTGTTTAATA+TGG + chr8.3:54757276-54757295 None:intergenic 25.0%
!! TTAATTTTGTGTTAATCCTC+TGG + chr8.3:54758108-54758127 None:intergenic 25.0%
!! TTGATAGTATGCATTTCTAT+CGG + chr8.3:54758484-54758503 None:intergenic 25.0%
!! TTGTAATATCGATAGTTTGT+GGG + chr8.3:54756522-54756541 None:intergenic 25.0%
!!! TGTGTTCTATTTTTTTTTGC+AGG - chr8.3:54756824-54756843 MS.gene59812:CDS 25.0%
!!! TTGAATCTGGTTTTTTAAGT+TGG - chr8.3:54757829-54757848 MS.gene59812:intron 25.0%
AAATAAAATTCCATAGGCAG+AGG - chr8.3:54756989-54757008 MS.gene59812:CDS 30.0%
AAGGTGCAAAAAAGATGAAA+AGG + chr8.3:54757429-54757448 None:intergenic 30.0%
ACTACAGAAAATAAGTGGTA+GGG - chr8.3:54757785-54757804 MS.gene59812:intron 30.0%
AGAAACTGTGTTAAATCTCA+AGG - chr8.3:54759064-54759083 MS.gene59812:CDS 30.0%
AGAACACACCTCAATTAATT+TGG + chr8.3:54757901-54757920 None:intergenic 30.0%
AGTCACTAAAGAAGAAAAGA+TGG + chr8.3:54757166-54757185 None:intergenic 30.0%
ATAATTTCAGCCCAATTACT+CGG + chr8.3:54757956-54757975 None:intergenic 30.0%
ATACAGTGAAGCAGAATATT+TGG - chr8.3:54759552-54759571 MS.gene59812:intron 30.0%
ATAGTATTAGCATCTTCTTG+TGG + chr8.3:54758657-54758676 None:intergenic 30.0%
ATATAGAAACAAACAGGTGA+AGG + chr8.3:54757137-54757156 None:intergenic 30.0%
ATGGAAGAATTATCGTTAGT+TGG - chr8.3:54759416-54759435 MS.gene59812:intron 30.0%
ATTACAATGTTAACCAACCA+AGG - chr8.3:54758856-54758875 MS.gene59812:intron 30.0%
ATTCCAAACATGTACAATAC+CGG - chr8.3:54758675-54758694 MS.gene59812:intron 30.0%
CAAACTCAGTACTATAAATC+AGG + chr8.3:54756905-54756924 None:intergenic 30.0%
CAGAACAAACCTATTATGAA+AGG - chr8.3:54759656-54759675 MS.gene59812:intron 30.0%
CGCATTATATAGAAACAAAC+AGG + chr8.3:54757143-54757162 None:intergenic 30.0%
CTAACGATAATTCTTCCATT+TGG + chr8.3:54759415-54759434 None:intergenic 30.0%
CTATCGATATTACAAACATC+TGG - chr8.3:54756527-54756546 MS.gene59812:CDS 30.0%
GAAACTGTGTTAAATCTCAA+GGG - chr8.3:54759065-54759084 MS.gene59812:CDS 30.0%
GAAAGAAAACAAATCTAGTG+TGG - chr8.3:54757029-54757048 MS.gene59812:CDS 30.0%
GTAATTAGGAATGTTCCTAT+TGG - chr8.3:54758921-54758940 MS.gene59812:intron 30.0%
GTGTATGAAAACTTGTGTAT+TGG - chr8.3:54756784-54756803 MS.gene59812:CDS 30.0%
TAAACAATACCAAAAACTCG+TGG + chr8.3:54758257-54758276 None:intergenic 30.0%
TACAGTGAAGCAGAATATTT+GGG - chr8.3:54759553-54759572 MS.gene59812:intron 30.0%
TACTACAGAAAATAAGTGGT+AGG - chr8.3:54757784-54757803 MS.gene59812:intron 30.0%
TGTAAGTTACTTACTTAGGA+TGG + chr8.3:54757229-54757248 None:intergenic 30.0%
TGTTCTGTTTACTGTATCAT+TGG - chr8.3:54757915-54757934 MS.gene59812:intron 30.0%
TTACAAAGTTGTTCCATTTG+AGG - chr8.3:54757244-54757263 MS.gene59812:CDS 30.0%
TTAGATGTTGGGTTTATGAA+TGG - chr8.3:54756725-54756744 MS.gene59812:CDS 30.0%
TTAGGAAAACATTGTAGAGA+TGG - chr8.3:54759515-54759534 MS.gene59812:intron 30.0%
TTGTACTAGATAATGTATCG+TGG + chr8.3:54758376-54758395 None:intergenic 30.0%
! AGTCCACTTCAATTTTTCTA+TGG + chr8.3:54759091-54759110 None:intergenic 30.0%
! CTACAATGTTTTCCTAAAGT+TGG + chr8.3:54759512-54759531 None:intergenic 30.0%
! CTGATTTATAGTACTGAGTT+TGG - chr8.3:54756903-54756922 MS.gene59812:CDS 30.0%
! GGTACTCCTTTTTAATCTAA+TGG - chr8.3:54757061-54757080 MS.gene59812:CDS 30.0%
! GTGTTACTACAGAAAATAAG+TGG - chr8.3:54757780-54757799 MS.gene59812:intron 30.0%
! TTGATTGTCAGTATCTCTTT+TGG + chr8.3:54758754-54758773 None:intergenic 30.0%
!! ATTAGTTCTATGAACTGCTT+TGG + chr8.3:54758718-54758737 None:intergenic 30.0%
!! GAGGTTGATGAATTGATTTA+TGG - chr8.3:54756664-54756683 MS.gene59812:CDS 30.0%
!! TAGATTAAAAAGGAGTACCA+TGG + chr8.3:54757060-54757079 None:intergenic 30.0%
!!! TAGTACTGAGTTTGGTTTTA+TGG - chr8.3:54756911-54756930 MS.gene59812:CDS 30.0%
AACACCAATTTCATAACCCA+TGG + chr8.3:54756758-54756777 None:intergenic 35.0%
AATATGGAACATGCCTCAAA+TGG + chr8.3:54757260-54757279 None:intergenic 35.0%
ACCGATGATACCTTCATATT+GGG - chr8.3:54759367-54759386 MS.gene59812:intron 35.0%
ATCGTGGAACAACACTAATT+TGG + chr8.3:54758360-54758379 None:intergenic 35.0%
ATTTCTGCAAAAATTGCCAG+AGG - chr8.3:54758880-54758899 MS.gene59812:intron 35.0%
CTGTATCATTGGAATATGTC+TGG - chr8.3:54757926-54757945 MS.gene59812:intron 35.0%
CTTCCAAAAAGCTTGATTGA+AGG + chr8.3:54757319-54757338 None:intergenic 35.0%
GTGAAGAACAACATGAATCA+TGG + chr8.3:54756956-54756975 None:intergenic 35.0%
TACCGATGATACCTTCATAT+TGG - chr8.3:54759366-54759385 MS.gene59812:intron 35.0%
TCAGTACTATAAATCAGGAC+CGG + chr8.3:54756900-54756919 None:intergenic 35.0%
TGAACTTGACAATTCTGCAA+AGG + chr8.3:54758975-54758994 None:intergenic 35.0%
TGTCATACACATAGATTCCA+AGG - chr8.3:54759016-54759035 MS.gene59812:CDS 35.0%
TTGGAATCTATGTGTATGAC+AGG + chr8.3:54759017-54759036 None:intergenic 35.0%
TTTCTACTGAGTCACTAACT+CGG - chr8.3:54756434-54756453 MS.gene59812:CDS 35.0%
TTTGGTACTCAATTGCAGAA+TGG - chr8.3:54758564-54758583 MS.gene59812:intron 35.0%
! AATGAAAAGCATGACCATGA+TGG + chr8.3:54757404-54757423 None:intergenic 35.0%
! CAATTTTTGCAGAAATGCCT+TGG + chr8.3:54758876-54758895 None:intergenic 35.0%
! CAGGTTTTTGTTGAGATCTT+TGG - chr8.3:54756843-54756862 MS.gene59812:CDS 35.0%
! GAAATGGAGTATTCAGAAAG+TGG - chr8.3:54759176-54759195 MS.gene59812:intron 35.0%
! GATCCTTCAATCAAGCTTTT+TGG - chr8.3:54757313-54757332 MS.gene59812:CDS 35.0%
! GATGAATTGATTTATGGTGC+AGG - chr8.3:54756670-54756689 MS.gene59812:CDS 35.0%
! TTTTGATGTTCGTACGAATG+AGG - chr8.3:54758611-54758630 MS.gene59812:intron 35.0%
!! TTGCTTATTTCTACGCTTAC+CGG + chr8.3:54758949-54758968 None:intergenic 35.0%
!!! AGTTTTGAAGGTTTGGGTAT+AGG - chr8.3:54756583-54756602 MS.gene59812:CDS 35.0%
!!! GTTACGAGTTTTGAAGGTTT+GGG - chr8.3:54756577-54756596 MS.gene59812:CDS 35.0%
AAACAGGTGAAGGATCACAT+GGG + chr8.3:54757127-54757146 None:intergenic 40.0%
AACCTCAAAGCCGAATCAAT+CGG + chr8.3:54756650-54756669 None:intergenic 40.0%
ACTAAGTACGAATCGTTCGT+GGG - chr8.3:54757987-54758006 MS.gene59812:intron 40.0%
ACTTTGACACCACAATGCAA+TGG - chr8.3:54759218-54759237 MS.gene59812:CDS 40.0%
AGAGTGAATCTGTGAATCTG+TGG + chr8.3:54757365-54757384 None:intergenic 40.0%
AGGCTGCTAAGAGTTCTATA+TGG - chr8.3:54759609-54759628 MS.gene59812:intron 40.0%
ATTATTACTCTGCTCCTCCA+TGG - chr8.3:54759264-54759283 MS.gene59812:intron 40.0%
CAGAATTAATGATCCGGAAG+AGG - chr8.3:54759589-54759608 MS.gene59812:intron 40.0%
CATACACATAGATTCCAAGG+AGG - chr8.3:54759019-54759038 MS.gene59812:CDS 40.0%
CCGATGATACCTTCATATTG+GGG - chr8.3:54759368-54759387 MS.gene59812:intron 40.0%
GAAAGTGGAATAGAGCATGT+TGG - chr8.3:54759191-54759210 MS.gene59812:intron 40.0%
GACTTATCCATGTTGGAATC+CGG - chr8.3:54759286-54759305 MS.gene59812:intron 40.0%
GGAAGTTCCTCTTAGTGAAT+CGG - chr8.3:54759040-54759059 MS.gene59812:CDS 40.0%
GGAATTAAGCCATTGCATTG+TGG + chr8.3:54759230-54759249 None:intergenic 40.0%
GGACTTGGAGTTATGTTATC+AGG + chr8.3:54759323-54759342 None:intergenic 40.0%
GGGCCATAGAAAAATTGAAG+TGG - chr8.3:54759085-54759104 MS.gene59812:intron 40.0%
GTCAGACTTTACTTACGTTC+TGG - chr8.3:54758045-54758064 MS.gene59812:intron 40.0%
GTGGTACTTGTTCCTGTAAT+AGG - chr8.3:54759483-54759502 MS.gene59812:intron 40.0%
TAAAGTTGGCGACCTATTAC+AGG + chr8.3:54759498-54759517 None:intergenic 40.0%
TCCACATCAACAATCCATCA+TGG - chr8.3:54757387-54757406 MS.gene59812:intron 40.0%
TGAAGGTTTGGGTATAGGTT+TGG - chr8.3:54756588-54756607 MS.gene59812:CDS 40.0%
TGAATCTGTGAATCTGTGGT+GGG + chr8.3:54757361-54757380 None:intergenic 40.0%
TGTAATAGGTCGCCAACTTT+AGG - chr8.3:54759497-54759516 MS.gene59812:intron 40.0%
TGTTGGGTTTATGAATGGAG+CGG - chr8.3:54756730-54756749 MS.gene59812:CDS 40.0%
TTAGCGGCATAACAGTTCTA+TGG + chr8.3:54758419-54758438 None:intergenic 40.0%
TTAGTTGGATCTGCGTTCAA+CGG - chr8.3:54759431-54759450 MS.gene59812:intron 40.0%
TTATCAGGCTTAAATGCCAC+CGG + chr8.3:54759308-54759327 None:intergenic 40.0%
TTCCAACATGGATAAGTCCA+TGG + chr8.3:54759284-54759303 None:intergenic 40.0%
TTCCTGAGTGGGATAATTCT+TGG - chr8.3:54758023-54758042 MS.gene59812:intron 40.0%
! CGAGAACTTGCATTTGACTT+AGG + chr8.3:54759704-54759723 None:intergenic 40.0%
! CGAGTAAAACCACGAGTTTT+TGG - chr8.3:54758245-54758264 MS.gene59812:intron 40.0%
! GCAAAAATTGCCAGAGGTAT+TGG - chr8.3:54758886-54758905 MS.gene59812:intron 40.0%
! GGTTCCATGGGTTATGAAAT+TGG - chr8.3:54756751-54756770 MS.gene59812:CDS 40.0%
! GGTTTGGTTGTTGAAGCTTA+CGG - chr8.3:54756604-54756623 MS.gene59812:CDS 40.0%
! GTACCGGTATTGTACATGTT+TGG + chr8.3:54758681-54758700 None:intergenic 40.0%
! GTTAATCCTCTGGTTCCTAA+GGG + chr8.3:54758098-54758117 None:intergenic 40.0%
! TATCGATAGTTTGTGGGATC+TGG + chr8.3:54756516-54756535 None:intergenic 40.0%
! TATGACAGGTACTGCATCAA+GGG + chr8.3:54759003-54759022 None:intergenic 40.0%
! TCTATCGGTGCTTTCAATCA+CGG + chr8.3:54758469-54758488 None:intergenic 40.0%
! TGTTAATCCTCTGGTTCCTA+AGG + chr8.3:54758099-54758118 None:intergenic 40.0%
! TTTTGCAGAAATGCCTTGGT+TGG + chr8.3:54758872-54758891 None:intergenic 40.0%
!! AAGCTTACGGTTGATGATTG+AGG - chr8.3:54756617-54756636 MS.gene59812:CDS 40.0%
!! ACCATGATGGATTGTTGATG+TGG + chr8.3:54757391-54757410 None:intergenic 40.0%
!! AGCTTACGGTTGATGATTGA+GGG - chr8.3:54756618-54756637 MS.gene59812:CDS 40.0%
!! AGTTTTCAAGAAGCCAGACA+AGG - chr8.3:54758779-54758798 MS.gene59812:intron 40.0%
!! CAATACCGGTACTTTGAAAC+CGG - chr8.3:54758689-54758708 MS.gene59812:intron 40.0%
!! CCCCAATATGAAGGTATCAT+CGG + chr8.3:54759371-54759390 None:intergenic 40.0%
!! GTTTCTACCGATTCACTAAG+AGG + chr8.3:54759050-54759069 None:intergenic 40.0%
!! TCTGTGGTTACGAGTTTTGA+AGG - chr8.3:54756571-54756590 MS.gene59812:CDS 40.0%
!! TTGTGGATTAGCTTGTTTGC+TGG + chr8.3:54758640-54758659 None:intergenic 40.0%
!!! CTGAGTTTGGTTTTATGGAG+CGG - chr8.3:54756916-54756935 MS.gene59812:CDS 40.0%
!!! GGTTACGAGTTTTGAAGGTT+TGG - chr8.3:54756576-54756595 MS.gene59812:CDS 40.0%
!!! GGTTGCTGTTTTTCTGATCT+GGG - chr8.3:54756548-54756567 MS.gene59812:CDS 40.0%
!!! TGGTTGCTGTTTTTCTGATC+TGG - chr8.3:54756547-54756566 MS.gene59812:CDS 40.0%
AAACTATTGCAGCGAGGACA+CGG + chr8.3:54758810-54758829 None:intergenic 45.0%
AATCTAGTGTGGACAGACCA+TGG - chr8.3:54757040-54757059 MS.gene59812:CDS 45.0%
ACTAAGAGGAACTTCCTCCT+TGG + chr8.3:54759036-54759055 None:intergenic 45.0%
AGGAATGTTCCTATTGGAGC+CGG - chr8.3:54758927-54758946 MS.gene59812:intron 45.0%
ATTGGGGCTGTATGCCAAAT+TGG - chr8.3:54759384-54759403 MS.gene59812:intron 45.0%
CAAACAGGTGAAGGATCACA+TGG + chr8.3:54757128-54757147 None:intergenic 45.0%
CAACATGGATAAGTCCATGG+AGG + chr8.3:54759281-54759300 None:intergenic 45.0%
CACACTTTCCTGAAAGGATC+CGG + chr8.3:54759780-54759799 None:intergenic 45.0%
CACGAACGATTCGTACTTAG+TGG + chr8.3:54757988-54758007 None:intergenic 45.0%
CACTAAGTACGAATCGTTCG+TGG - chr8.3:54757986-54758005 MS.gene59812:intron 45.0%
CATTCCATCCCCTTCATCTT+CGG - chr8.3:54759454-54759473 MS.gene59812:intron 45.0%
CGGTGAGTGAGTTAACTCAA+TGG - chr8.3:54756454-54756473 MS.gene59812:CDS 45.0%
CGTTCCAGTAATCCGAAGTT+CGG + chr8.3:54758071-54758090 None:intergenic 45.0%
CTATGAACTGCTTTGGTCAC+CGG + chr8.3:54758711-54758730 None:intergenic 45.0%
CTCCATGGACTTATCCATGT+TGG - chr8.3:54759279-54759298 MS.gene59812:intron 45.0%
GACCAAGAATTATCCCACTC+AGG + chr8.3:54758028-54758047 None:intergenic 45.0%
GGACTCTTCTACTGTCAAAG+AGG - chr8.3:54759106-54759125 MS.gene59812:intron 45.0%
GTCTGGTTGACCGAGTAATT+GGG - chr8.3:54757943-54757962 MS.gene59812:intron 45.0%
GTGAATCTGTGAATCTGTGG+TGG + chr8.3:54757362-54757381 None:intergenic 45.0%
TATGAATGGAGCGGTTCCAT+GGG - chr8.3:54756739-54756758 MS.gene59812:CDS 45.0%
TCCATTTGGCCAACCCAATT+TGG + chr8.3:54759401-54759420 None:intergenic 45.0%
TGGAGCTGCTATTCTTGCTT+GGG + chr8.3:54756489-54756508 None:intergenic 45.0%
TGTCTGGTTGACCGAGTAAT+TGG - chr8.3:54757942-54757961 MS.gene59812:intron 45.0%
TTATCCATGTTGGAATCCGG+TGG - chr8.3:54759289-54759308 MS.gene59812:intron 45.0%
TTATGAATGGAGCGGTTCCA+TGG - chr8.3:54756738-54756757 MS.gene59812:CDS 45.0%
TTGGGGCTGTATGCCAAATT+GGG - chr8.3:54759385-54759404 MS.gene59812:intron 45.0%
TTGTCTTCAACCTCTGCCTA+TGG + chr8.3:54757002-54757021 None:intergenic 45.0%
! GTATGACAGGTACTGCATCA+AGG + chr8.3:54759004-54759023 None:intergenic 45.0%
! GTTTTTCTGATCTGGGTCTG+TGG - chr8.3:54756555-54756574 MS.gene59812:CDS 45.0%
AAGTCCTGCAACCATGATGG+CGG - chr8.3:54759337-54759356 MS.gene59812:intron 50.0%
AATGCCACCGGATTCCAACA+TGG + chr8.3:54759296-54759315 None:intergenic 50.0%
ACTGCTAGCCGAAGATGAAG+GGG + chr8.3:54759465-54759484 None:intergenic 50.0%
AGGAGCTCTCAAAGAAGAGC+TGG + chr8.3:54759147-54759166 None:intergenic 50.0%
AGGGTTGAGGCCGATTGATT+CGG - chr8.3:54756637-54756656 MS.gene59812:CDS 50.0%
AGGTGAAGGATCACATGGGA+AGG + chr8.3:54757123-54757142 None:intergenic 50.0%
AGTTTGTGGGATCTGGAGAC+TGG + chr8.3:54756509-54756528 None:intergenic 50.0%
ATCCGAGTTCGATTCCTGAG+TGG - chr8.3:54758011-54758030 MS.gene59812:intron 50.0%
ATTTATGGTGCAGGTGCAGC+TGG - chr8.3:54756679-54756698 MS.gene59812:CDS 50.0%
CACTGCTAGCCGAAGATGAA+GGG + chr8.3:54759466-54759485 None:intergenic 50.0%
CTGGAGCTGCTATTCTTGCT+TGG + chr8.3:54756490-54756509 None:intergenic 50.0%
CTTACGTTCTGGCCGAACTT+CGG - chr8.3:54758056-54758075 MS.gene59812:intron 50.0%
GAACTCTTAGCAGCCTCTTC+CGG + chr8.3:54759605-54759624 None:intergenic 50.0%
GGACAGCTGGTGGAGTAATT+AGG - chr8.3:54758907-54758926 MS.gene59812:intron 50.0%
GGCATACAGCCCCAATATGA+AGG + chr8.3:54759380-54759399 None:intergenic 50.0%
GGCTGTATGCCAAATTGGGT+TGG - chr8.3:54759389-54759408 MS.gene59812:intron 50.0%
GTCTCCAAACTATTGCAGCG+AGG + chr8.3:54758816-54758835 None:intergenic 50.0%
GTGTCCTCGCTGCAATAGTT+TGG - chr8.3:54758809-54758828 MS.gene59812:intron 50.0%
TACTCCATTTCCCCAGATGC+AGG + chr8.3:54759167-54759186 None:intergenic 50.0%
TATGGAGCGGACAAGAATGC+TGG - chr8.3:54756929-54756948 MS.gene59812:CDS 50.0%
TCCAAGTCCTGCAACCATGA+TGG - chr8.3:54759334-54759353 MS.gene59812:intron 50.0%
TCCCACTCAGGAATCGAACT+CGG + chr8.3:54758016-54758035 None:intergenic 50.0%
TCCGAGTTCGATTCCTGAGT+GGG - chr8.3:54758012-54758031 MS.gene59812:intron 50.0%
TTACTGGAACGCCTTCCCTT+AGG - chr8.3:54758080-54758099 MS.gene59812:intron 50.0%
TTTATGGTGCAGGTGCAGCT+GGG - chr8.3:54756680-54756699 MS.gene59812:CDS 50.0%
TTTGAGAGCTCCTGCATCTG+GGG - chr8.3:54759154-54759173 MS.gene59812:intron 50.0%
! ATCCTCTGGTTCCTAAGGGA+AGG + chr8.3:54758094-54758113 None:intergenic 50.0%
! CTTTGAGAGCTCCTGCATCT+GGG - chr8.3:54759153-54759172 MS.gene59812:intron 50.0%
! TCTTTGAGAGCTCCTGCATC+TGG - chr8.3:54759152-54759171 MS.gene59812:intron 50.0%
!! CGGTTGATGATTGAGGGTTG+AGG - chr8.3:54756624-54756643 MS.gene59812:CDS 50.0%
!! GCCAAATTGGGTTGGCCAAA+TGG - chr8.3:54759397-54759416 MS.gene59812:intron 50.0%
!! GGTCACCGGTTTCAAAGTAC+CGG + chr8.3:54758697-54758716 None:intergenic 50.0%
!! GTGTGTCGACTGACACAGTT+TGG - chr8.3:54758546-54758565 MS.gene59812:intron 50.0%
AGCTCCTGCATCTGGGGAAA+TGG - chr8.3:54759160-54759179 MS.gene59812:intron 55.0%
CACCAGCTGTCCAATACCTC+TGG + chr8.3:54758899-54758918 None:intergenic 55.0%
CCACTGCTAGCCGAAGATGA+AGG + chr8.3:54759467-54759486 None:intergenic 55.0%
CCTTCATCTTCGGCTAGCAG+TGG - chr8.3:54759464-54759483 MS.gene59812:intron 55.0%
CGGTACTTCTACCGCCATCA+TGG + chr8.3:54759351-54759370 None:intergenic 55.0%
CTAGCCGAAGATGAAGGGGA+TGG + chr8.3:54759461-54759480 None:intergenic 55.0%
CTGGCCGAACTTCGGATTAC+TGG - chr8.3:54758064-54758083 MS.gene59812:intron 55.0%
GACCGGCATCACAAGCACAA+GGG + chr8.3:54756883-54756902 None:intergenic 55.0%
GCCATCATGGTTGCAGGACT+TGG + chr8.3:54759338-54759357 None:intergenic 55.0%
GTCCCTTGTGCTTGTGATGC+CGG - chr8.3:54756878-54756897 MS.gene59812:CDS 55.0%
TCCACGTTGTTCACAACGCC+AGG + chr8.3:54756172-54756191 None:intergenic 55.0%
TCTACCGCCATCATGGTTGC+AGG + chr8.3:54759344-54759363 None:intergenic 55.0%
!! CAGAGGTATTGGACAGCTGG+TGG - chr8.3:54758897-54758916 MS.gene59812:intron 55.0%
!! CTACGCTTACCGGCTCCAAT+AGG + chr8.3:54758939-54758958 None:intergenic 55.0%
!! GGCCGATTGATTCGGCTTTG+AGG - chr8.3:54756645-54756664 MS.gene59812:CDS 55.0%
!! TGCCAGAGGTATTGGACAGC+TGG - chr8.3:54758894-54758913 MS.gene59812:intron 55.0%
CGCCTTCCCTTAGGAACCAG+AGG - chr8.3:54758089-54758108 MS.gene59812:intron 60.0%
CGGAGCGAGAGAAAGCAGCA+GGG + chr8.3:54759760-54759779 None:intergenic 60.0%
CGTTGTTCACAACGCCAGGC+CGG + chr8.3:54756168-54756187 None:intergenic 60.0%
CTCTCGCTCCGGATCCTTTC+AGG - chr8.3:54759769-54759788 MS.gene59812:CDS 60.0%
GCCTGGCGTTGTGAACAACG+TGG - chr8.3:54756168-54756187 MS.gene59812:CDS 60.0%
GGACACGGCAGAACCTTGTC+TGG + chr8.3:54758795-54758814 None:intergenic 60.0%
GGACCGGCATCACAAGCACA+AGG + chr8.3:54756884-54756903 None:intergenic 60.0%
!! CCTGCTGCTTTCTCTCGCTC+CGG - chr8.3:54759758-54759777 MS.gene59812:CDS 60.0%
CCGGAGCGAGAGAAAGCAGC+AGG + chr8.3:54759761-54759780 None:intergenic 65.0%
CTGCGGCGGAGTTGTCACTC+CGG - chr8.3:54756146-54756165 MS.gene59812:CDS 65.0%
GCGGAGTTGTCACTCCGGCC+TGG - chr8.3:54756151-54756170 MS.gene59812:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 54756135 54759802 54756135 ID=MS.gene59812
chr8.3 mRNA 54756135 54759802 54756135 ID=MS.gene59812.t1;Parent=MS.gene59812
chr8.3 exon 54759751 54759802 54759751 ID=MS.gene59812.t1.exon1;Parent=MS.gene59812.t1
chr8.3 CDS 54759751 54759802 54759751 ID=cds.MS.gene59812.t1;Parent=MS.gene59812.t1
chr8.3 exon 54759214 54759245 54759214 ID=MS.gene59812.t1.exon2;Parent=MS.gene59812.t1
chr8.3 CDS 54759214 54759245 54759214 ID=cds.MS.gene59812.t1;Parent=MS.gene59812.t1
chr8.3 exon 54758987 54759091 54758987 ID=MS.gene59812.t1.exon3;Parent=MS.gene59812.t1
chr8.3 CDS 54758987 54759091 54758987 ID=cds.MS.gene59812.t1;Parent=MS.gene59812.t1
chr8.3 exon 54756135 54757355 54756135 ID=MS.gene59812.t1.exon4;Parent=MS.gene59812.t1
chr8.3 CDS 54756135 54757355 54756135 ID=cds.MS.gene59812.t1;Parent=MS.gene59812.t1
Gene Sequence

>MS.gene59812

ATGGGCGGAGGCTGCGGCGGAGTTGTCACTCCGGCCTGGCGTTGTGAACAACGTGGAGATTATGAACAGACCGATAAAAACCATTGATTTAATTGGAATGAACTTTTAAAAATAAAGGGTGATAACTTAAATTCAATTATAGTACATTGCTTATGAACCGTTGCTTTCTAGTTTATGTTAATGTAATAAAATTTGGAGTTGAACAAGAACAATCTTTCTGTAATATCAACTTCAAATTATGTACATTCACTTCTTCTCTCACACACCCACTTAGATTTATAGTTTGATTTTTTTTTTTATTTCTACTGAGTCACTAACTCGGTGAGTGAGTTAACTCAATGGCGTCTTCTTCCCAAGCAAGAATAGCAGCTCCAGTCTCCAGATCCCACAAACTATCGATATTACAAACATCTGGTTGCTGTTTTTCTGATCTGGGTCTGTGGTTACGAGTTTTGAAGGTTTGGGTATAGGTTTGGTTGTTGAAGCTTACGGTTGATGATTGAGGGTTGAGGCCGATTGATTCGGCTTTGAGGTTGATGAATTGATTTATGGTGCAGGTGCAGCTGGGTTTGCGTTTGAATTTATGAAAGTTAGATGTTGGGTTTATGAATGGAGCGGTTCCATGGGTTATGAAATTGGTGTTGATTTTGTGTATGAAAACTTGTGTATTGGTGATGAATTGATCTCACTGTGTTCTATTTTTTTTTGCAGGTTTTTGTTGAGATCTTTGGCTATAATTTTCGGTCCCTTGTGCTTGTGATGCCGGTCCTGATTTATAGTACTGAGTTTGGTTTTATGGAGCGGACAAGAATGCTGGTCCATGATTCATGTTGTTCTTCACTTCTTCTTCATTGAAATAAAATTCCATAGGCAGAGGTTGAAGACAATGAAAGTGAAAGAAAACAAATCTAGTGTGGACAGACCATGGTACTCCTTTTTAATCTAATGGTAAAAATCAAATGACTCATGATGGGAAAGTTTTAGACCTTCCCATGTGATCCTTCACCTGTTTGTTTCTATATAATGCGCCATCTTTTCTTCTTTAGTGACTTTTTTGAGTCATTTTCCACTTTCTTTCTTTGTTTCTTTTTCCATCCTAAGTAAGTAACTTACAAAGTTGTTCCATTTGAGGCATGTTCCATATTAAACAAGAACAACAACAACAACAACAACAAGAAGATCCTTCAATCAAGCTTTTTGGAAGTGATATTCAAATTCATACTCCCACCACAGATTCACAGATTCACTCTCTTCCACATCAACAATCCATCATGGTCATGCTTTTCATTTTCCTTTTCATCTTTTTTGCACCTTTTTTATCTTTCTTACATATTTTTTTGGTTGCACTTTTTCTTTTTCTATATTTAAAATTTTAAGCAAACTTAATGCTAAAGTTTGCATTTTTATACTAAAAATATGAAAACCCAGAATTTTATTTTTCATATTGAATCGATATATATGCTATTTATGATATAAAAACAATTTTATTATTATTCATAAATAGTTCTAAGTTGTATATACTTGTATAATAATGAATGTTTGGATTTTGTTATTCATATCTATAACTAAAAAATGTTTAAGTTCTAGCTAGGTATATGAAGTTGTTTGATAATTTGTTTTGAAGGTAGTGAGACTTGACTTTTGAGTGTTACTACAGAAAATAAGTGGTAGGGTTCAATTTGAATTATTTGTGTTTGAATCTGGTTTTTTAAGTTGGACTCAACTGTTTCACCAGTAATTGACATGAAAAATGTTAAATTGGACCAAATTAATTGAGGTGTGTTCTGTTTACTGTATCATTGGAATATGTCTGGTTGACCGAGTAATTGGGCTGAAATTATTAATGAACTCCACTAAGTACGAATCGTTCGTGGGAATCCGAGTTCGATTCCTGAGTGGGATAATTCTTGGTCAGACTTTACTTACGTTCTGGCCGAACTTCGGATTACTGGAACGCCTTCCCTTAGGAACCAGAGGATTAACACAAAATTAAAATGAAATATGTTAGGCGAAAGAATATTTTTGACCTGTTGTTATGTTAAGTTCAAAATCGATTGCATTTTAACTTGATTCTTGTTGTCCTATTCTTTAACTGTTTGATTACTTTGCTCGAGTAAAACCACGAGTTTTTGGTATTGTTTAATTTGTGGGTATTTCATGTATAGTTTTGATGTGTAGAAATCAACGTTGTTAAATAGTGGCTATAGCGTAGCAGATTTTGACCAAATTAGTGTTGTTCCACGATACATTATCTAGTACAAAATGTTGTCAAATAGCAGTGCCATAGAACTGTTATGCCGCTAATTTGAAAAAGTCATTATTTTCGGCGATCCGTGATTGAAAGCACCGATAGAAATGCATACTATCAATGAGTTATAACTTTTGGTCCTAATGCAAGTTGTCTTTTTAATGTGTGTCGACTGACACAGTTTGGTACTCAATTGCAGAATGGACTTGAAGAATCAGCTAATGCTGATTTTGATGTTCGTACGAATGAGGTTTCCAGCAAACAAGCTAATCCACAAGAAGATGCTAATACTATTCCAAACATGTACAATACCGGTACTTTGAAACCGGTGACCAAAGCAGTTCATAGAACTAATGAACACAAGACTGCCAAAAGAGATACTGACAATCAAGAGAAAGTTTTCAAGAAGCCAGACAAGGTTCTGCCGTGTCCTCGCTGCAATAGTTTGGAGACAAAGTTTTGCTATTTCAACAATTACAATGTTAACCAACCAAGGCATTTCTGCAAAAATTGCCAGAGGTATTGGACAGCTGGTGGAGTAATTAGGAATGTTCCTATTGGAGCCGGTAAGCGTAGAAATAAGCAATCGCCTTTGCAGAATTGTCAAGTTCATGTTACCCTTGATGCAGTACCTGTCATACACATAGATTCCAAGGAGGAAGTTCCTCTTAGTGAATCGGTAGAAACTGTGTTAAATCTCAAGGGCCATAGAAAAATTGAAGTGGACTCTTCTACTGTCAAAGAGGATATTGAGAACTCTTCCAGCTCTTCTTTGAGAGCTCCTGCATCTGGGGAAATGGAGTATTCAGAAAGTGGAATAGAGCATGTTGGTTTGACTTTGACACCACAATGCAATGGCTTAATTCCTTTACATTCACTTCATTATTACTCTGCTCCTCCATGGACTTATCCATGTTGGAATCCGGTGGCATTTAAGCCTGATAACATAACTCCAAGTCCTGCAACCATGATGGCGGTAGAAGTACCGATGATACCTTCATATTGGGGCTGTATGCCAAATTGGGTTGGCCAAATGGAAGAATTATCGTTAGTTGGATCTGCGTTCAACGGCATTCCATCCCCTTCATCTTCGGCTAGCAGTGGTACTTGTTCCTGTAATAGGTCGCCAACTTTAGGAAAACATTGTAGAGATGGAAGTACACAAGAAGATACAGTGAAGCAGAATATTTGGGTGCCTAAAACTATCAGAATTAATGATCCGGAAGAGGCTGCTAAGAGTTCTATATGGTCAACTTTGAGAACGAAATCTGAACAGAACAAACCTATTATGAAAGGAAGTGTTTTTAAATCATTTGAACCTAAGTCAAATGCAAGTTCTCGTGATTTAGACGATAATCAAATTCTACGAGCAAACCCTGCTGCTTTCTCTCGCTCCGGATCCTTTCAGGAAAGTGTGTAA
Protein sequence

>MS.gene59812.t1

MGGGCGGVVTPAWRCEQRAAGFAFEFMKVFVEIFGYNFRSLVLVMPVLIYSTEFGFMERTRMLNGLEESANADFDVRTNEVSSKQANPQEDANTIPNMYNTGTLKPVTKAVHRTNEHKTAKRDTDNQEKVFKKPDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGVIRNVPIGAGKRRNKQSPLQNCQVHVTLDAVPVIHIDSKEEVPLSESVETVLNLKGHRKIEVDSSTVKEDIENSSSSSLRAPASGEMEYSESGIEHVGLTLTPQCNGLIPLHSLHYYSAPPWTYPCWNPVAFKPDNITPSPATMMAVEVPMIPSYWGCMPNWVGQMEELSLVGSAFNGIPSPSSSASSGTCSCNRSPTLGKHCRDGSTQEDTVKQNIWVPKTIRINDPEEAAKSSIWSTLRTKSEQNKPIMKGSVFKSFEPKSNASSRDLDDNQILRANPAAFSRSGSFQESV