AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59896

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59896.t1 MTR_8g446900 88.854 314 34 1 1 314 1 313 0.0 581
MS.gene59896.t1 MTR_8g100050 49.338 302 143 4 3 297 101 399 2.51e-93 292
MS.gene59896.t1 MTR_8g100050 49.338 302 143 4 3 297 101 399 1.93e-92 292
MS.gene59896.t1 MTR_2g005240 46.980 298 149 4 2 293 64 358 1.16e-85 271
MS.gene59896.t1 MTR_8g027440 45.545 303 151 8 2 296 70 366 1.28e-78 253
MS.gene59896.t1 MTR_4g060460 41.667 324 165 7 1 304 93 412 3.65e-77 251
MS.gene59896.t1 MTR_4g060460 41.667 324 165 7 1 304 93 412 4.06e-77 251
MS.gene59896.t1 MTR_2g093740 41.667 312 159 6 1 293 95 402 2.28e-76 247
MS.gene59896.t1 MTR_4g088210 42.157 306 155 6 7 293 78 380 2.66e-76 247
MS.gene59896.t1 MTR_4g088210 42.157 306 155 6 7 293 78 380 2.85e-76 247
MS.gene59896.t1 MTR_2g093740 41.667 312 159 6 1 293 95 402 1.25e-75 246
MS.gene59896.t1 MTR_4g021580 44.482 299 152 6 3 293 61 353 2.21e-75 243
MS.gene59896.t1 MTR_2g093740 41.667 312 159 6 1 293 95 402 2.93e-75 246
MS.gene59896.t1 MTR_4g021580 44.482 299 152 6 3 293 61 353 3.73e-75 243
MS.gene59896.t1 MTR_7g062540 44.108 297 152 6 3 291 56 346 9.00e-75 243
MS.gene59896.t1 MTR_2g014770 42.904 303 154 5 7 293 92 391 3.72e-73 237
MS.gene59896.t1 MTR_2g014770 42.904 303 154 5 7 293 92 391 1.43e-72 237
MS.gene59896.t1 MTR_2g093740 40.000 325 159 7 1 293 95 415 1.55e-72 237
MS.gene59896.t1 MTR_2g093740 40.000 325 159 7 1 293 95 415 6.01e-72 237
MS.gene59896.t1 MTR_2g093740 40.000 325 159 7 1 293 95 415 1.30e-71 237
MS.gene59896.t1 MTR_2g093740 43.137 255 132 5 48 293 22 272 8.93e-66 218
MS.gene59896.t1 MTR_2g093740 43.137 255 132 5 48 293 22 272 2.05e-65 218
MS.gene59896.t1 MTR_5g076270 42.667 300 158 8 2 291 65 360 2.28e-65 220
MS.gene59896.t1 MTR_8g079492 42.617 298 158 7 3 291 65 358 2.62e-65 221
MS.gene59896.t1 MTR_8g079492 42.617 298 158 7 3 291 65 358 2.70e-65 221
MS.gene59896.t1 MTR_1g024025 44.147 299 150 9 2 289 84 376 5.89e-65 221
MS.gene59896.t1 MTR_2g018690 43.478 299 155 8 3 291 65 359 1.02e-64 219
MS.gene59896.t1 MTR_2g043250 41.391 302 162 7 3 294 64 360 1.02e-63 218
MS.gene59896.t1 MTR_3g064050 41.806 299 162 7 2 291 67 362 1.06e-63 216
MS.gene59896.t1 MTR_4g124900 40.000 305 162 7 3 294 64 360 3.52e-63 216
MS.gene59896.t1 MTR_4g124900 40.000 305 162 7 3 294 64 360 3.82e-63 216
MS.gene59896.t1 MTR_2g093740 41.045 268 132 6 48 293 22 285 4.55e-62 208
MS.gene59896.t1 MTR_2g093740 41.045 268 132 6 48 293 22 285 1.16e-61 208
MS.gene59896.t1 MTR_8g079492 43.214 280 146 7 21 291 1 276 4.72e-61 208
MS.gene59896.t1 MTR_8g101360 40.656 305 159 8 1 291 71 367 4.44e-60 207
MS.gene59896.t1 MTR_2g094570 33.815 346 187 6 5 309 50 394 4.60e-54 187
MS.gene59896.t1 MTR_2g094570 33.815 346 187 6 5 309 50 394 6.48e-54 187
MS.gene59896.t1 MTR_2g094570 33.815 346 187 6 5 309 106 450 8.52e-54 187
MS.gene59896.t1 MTR_4g058930 33.043 345 175 7 12 307 56 393 4.66e-52 182
MS.gene59896.t1 MTR_4g058930 33.043 345 175 7 12 307 56 393 6.10e-52 182
MS.gene59896.t1 MTR_1g094960 33.634 333 174 7 1 289 53 382 2.73e-51 179
MS.gene59896.t1 MTR_1g064430 31.081 370 193 10 8 315 69 438 1.59e-48 172
MS.gene59896.t1 MTR_1g064430 31.081 370 193 10 8 315 82 451 2.27e-48 172
MS.gene59896.t1 MTR_7g101280 30.899 356 179 12 8 307 73 417 6.91e-45 162
MS.gene59896.t1 MTR_0041s0110 30.899 356 179 12 8 307 73 417 6.91e-45 162
MS.gene59896.t1 MTR_5g040880 29.758 289 181 6 12 292 60 334 1.40e-38 143
MS.gene59896.t1 MTR_7g101275 31.769 277 166 7 8 271 34 300 1.24e-37 138
MS.gene59896.t1 MTR_3g073420 28.653 349 202 8 12 319 66 408 1.29e-37 141
MS.gene59896.t1 MTR_5g061220 28.523 298 191 4 14 289 70 367 1.85e-35 134
MS.gene59896.t1 MTR_2g024430 30.070 286 173 7 14 289 72 340 7.13e-35 133
MS.gene59896.t1 MTR_1g058210 29.236 301 188 8 1 289 51 338 1.20e-31 123
MS.gene59896.t1 MTR_5g082140 28.105 306 189 8 12 306 61 346 1.20e-30 120
MS.gene59896.t1 MTR_0041s0120 29.452 292 165 9 8 271 34 312 2.91e-28 113
MS.gene59896.t1 MTR_2g006270 29.412 289 175 9 13 289 65 336 4.97e-26 107
MS.gene59896.t1 MTR_5g040740 27.881 269 173 6 12 273 61 315 1.62e-25 105
MS.gene59896.t1 MTR_5g060630 25.231 325 187 13 9 289 58 370 1.25e-22 98.6
MS.gene59896.t1 MTR_5g460740 25.231 325 187 13 9 289 58 370 1.25e-22 98.6
MS.gene59896.t1 MTR_5g062970 32.432 148 96 1 9 152 81 228 1.17e-20 89.4
MS.gene59896.t1 MTR_5g060780 27.000 300 176 14 10 289 59 335 2.70e-19 88.2
MS.gene59896.t1 MTR_5g460920 27.483 302 172 15 10 289 59 335 6.52e-19 87.0
MS.gene59896.t1 MTR_2g006380 26.510 298 167 13 13 289 72 338 1.19e-18 86.7
MS.gene59896.t1 MTR_5g061890 26.333 300 178 14 10 289 59 335 1.58e-17 82.8
MS.gene59896.t1 MTR_3g064050 45.378 119 59 4 179 291 7 125 1.14e-16 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59896.t1 AT5G62000 48.026 304 148 4 1 297 101 401 8.81e-96 302
MS.gene59896.t1 AT5G62000 48.026 304 148 4 1 297 101 401 8.81e-96 302
MS.gene59896.t1 AT5G62000 48.026 304 148 4 1 297 101 401 8.81e-96 302
MS.gene59896.t1 AT5G62000 48.026 304 148 4 1 297 101 401 8.81e-96 302
MS.gene59896.t1 AT5G62000 48.185 303 147 4 2 297 102 401 1.56e-95 301
MS.gene59896.t1 AT1G59750 44.295 298 155 5 1 291 62 355 2.45e-81 259
MS.gene59896.t1 AT1G59750 44.295 298 155 5 1 291 62 355 3.29e-81 259
MS.gene59896.t1 AT1G59750 44.295 298 155 5 1 291 62 355 3.50e-81 259
MS.gene59896.t1 AT1G59750 44.295 298 155 5 1 291 62 355 3.50e-81 259
MS.gene59896.t1 AT3G61830 44.444 297 151 7 2 291 16 305 2.59e-79 251
MS.gene59896.t1 AT3G61830 44.444 297 151 7 2 291 67 356 1.27e-78 251
MS.gene59896.t1 AT2G46530 43.098 297 157 6 2 292 63 353 5.07e-77 247
MS.gene59896.t1 AT2G46530 43.098 297 157 6 2 292 84 374 1.35e-76 246
MS.gene59896.t1 AT5G60450 42.188 320 163 7 1 302 80 395 1.35e-75 246
MS.gene59896.t1 AT5G60450 42.105 323 159 7 1 302 104 419 2.04e-75 246
MS.gene59896.t1 AT4G23980 43.919 296 151 8 4 291 56 344 3.59e-74 240
MS.gene59896.t1 AT4G23980 43.919 296 151 8 4 291 56 344 3.77e-74 240
MS.gene59896.t1 AT2G33860 39.474 304 165 4 6 293 92 392 1.47e-71 233
MS.gene59896.t1 AT1G19220 42.384 302 159 8 3 294 64 360 1.40e-66 226
MS.gene59896.t1 AT5G37020 42.617 298 159 7 3 291 64 358 1.00e-65 220
MS.gene59896.t1 AT1G19850 43.333 300 152 10 2 289 84 377 1.01e-65 222
MS.gene59896.t1 AT1G19850 43.333 300 152 10 2 289 95 388 1.28e-65 222
MS.gene59896.t1 AT2G46530 44.351 239 122 5 59 292 34 266 1.79e-65 214
MS.gene59896.t1 AT5G37020 42.617 298 159 7 3 291 64 358 2.54e-65 220
MS.gene59896.t1 AT5G20730 41.584 303 161 9 3 294 65 362 1.04e-63 218
MS.gene59896.t1 AT5G20730 41.391 302 162 8 3 294 65 361 1.09e-63 218
MS.gene59896.t1 AT5G20730 41.584 303 161 9 3 294 65 362 1.11e-63 218
MS.gene59896.t1 AT2G33860 43.038 237 127 3 62 293 2 235 2.03e-63 207
MS.gene59896.t1 AT1G34170 39.661 295 163 8 4 291 68 354 1.31e-61 204
MS.gene59896.t1 AT1G34310 37.543 293 170 6 4 291 70 354 2.04e-61 206
MS.gene59896.t1 AT1G35540 38.225 293 168 6 4 291 70 354 2.35e-61 206
MS.gene59896.t1 AT1G30330 41.611 298 162 7 3 291 67 361 9.83e-61 208
MS.gene59896.t1 AT1G30330 41.611 298 162 7 3 291 67 361 9.83e-61 208
MS.gene59896.t1 AT1G35240 37.627 295 171 6 4 293 70 356 1.14e-60 204
MS.gene59896.t1 AT1G30330 41.611 298 162 7 3 291 65 359 1.16e-60 208
MS.gene59896.t1 AT1G34410 37.543 293 170 7 4 291 70 354 2.39e-58 197
MS.gene59896.t1 AT5G37020 45.763 236 119 5 62 291 31 263 2.98e-57 196
MS.gene59896.t1 AT1G34390 37.884 293 167 7 4 291 70 352 3.13e-57 194
MS.gene59896.t1 AT1G35520 36.177 293 174 6 4 291 70 354 9.24e-57 193
MS.gene59896.t1 AT2G28350 33.628 339 171 7 4 289 44 381 3.45e-55 190
MS.gene59896.t1 AT2G28350 33.628 339 171 7 4 289 44 381 3.56e-55 191
MS.gene59896.t1 AT1G34170 38.776 294 141 9 4 291 68 328 1.60e-54 185
MS.gene59896.t1 AT1G34170 38.776 294 141 9 4 291 68 328 8.70e-54 184
MS.gene59896.t1 AT4G30080 33.535 331 178 9 1 289 53 383 7.02e-52 181
MS.gene59896.t1 AT1G77850 30.031 323 177 5 10 289 61 377 7.41e-44 158
MS.gene59896.t1 AT1G77850 30.031 323 177 5 10 289 61 377 7.59e-44 158
MS.gene59896.t1 AT1G43950 40.506 158 89 2 4 161 70 222 3.37e-34 125
MS.gene59896.t1 AT1G01030 37.500 96 59 1 56 151 50 144 1.10e-11 65.1
MS.gene59896.t1 AT1G01030 37.500 96 59 1 56 151 50 144 1.49e-11 65.1
MS.gene59896.t1 AT2G36080 36.190 105 63 2 62 162 38 142 2.13e-11 62.0
MS.gene59896.t1 AT2G36080 36.190 105 63 2 62 162 38 142 2.13e-11 62.0
MS.gene59896.t1 AT4G01500 37.778 90 53 2 62 151 36 122 3.47e-11 63.5
MS.gene59896.t1 AT2G36080 36.190 105 63 2 62 162 38 142 6.16e-11 62.0
MS.gene59896.t1 AT5G06250 32.484 157 79 5 62 206 46 187 8.85e-11 62.0
MS.gene59896.t1 AT2G36080 36.190 105 63 2 62 162 38 142 9.18e-11 61.6
MS.gene59896.t1 AT2G46870 31.496 127 81 2 41 162 14 139 9.29e-11 62.4
MS.gene59896.t1 AT5G06250 32.278 158 80 5 62 207 46 188 9.37e-11 62.0
MS.gene59896.t1 AT1G25560 35.965 114 65 2 44 150 178 290 9.83e-11 62.4

Find 72 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACATTATGATCACCTTCT+TGG 0.264286 8.3:+53165639 None:intergenic
AGTTGTGGGTGTTCAATTAA+AGG 0.274617 8.3:-53168646 MS.gene59896:intron
GGACAAACCCTCTCAATATT+TGG 0.276281 8.3:+53165129 None:intergenic
TTAGAAGGCAAATGATAGTT+AGG 0.299166 8.3:+53168681 None:intergenic
CTAAAAGAGTAGATTTCATT+AGG 0.304482 8.3:+53168130 None:intergenic
AGGGGAGAGAATGGTGAAAT+TGG 0.305389 8.3:-53166058 MS.gene59896:CDS
GTTGTCCATGCTGTTTCTAT+TGG 0.311077 8.3:-53165935 MS.gene59896:CDS
TCCATGGTGGATTGAGCCTT+TGG 0.330320 8.3:-53165109 MS.gene59896:CDS
GAGAATGGTGAAATTGGTAT+TGG 0.352900 8.3:-53166052 MS.gene59896:CDS
CATCTATCTGCATGTTGCTT+TGG 0.355107 8.3:+53168058 None:intergenic
TTCTGAACCAGGCCACCTAA+TGG 0.364231 8.3:+53165297 None:intergenic
CCATGGTGGATTGAGCCTTT+GGG 0.374994 8.3:-53165108 MS.gene59896:CDS
TTATTTGATAAAGGGAGAAT+TGG 0.387439 8.3:+53165057 None:intergenic
TAGTAAGTTGCTCACTTCAA+TGG 0.390845 8.3:-53168110 MS.gene59896:CDS
GCAACAAGAATATGCATTAG+AGG 0.392171 8.3:-53168173 MS.gene59896:CDS
AGAATGGTGAAATTGGTATT+GGG 0.394064 8.3:-53166051 MS.gene59896:CDS
TATAGGTATGGTACAATAGT+TGG 0.409092 8.3:-53165337 MS.gene59896:intron
AATGCCCTTCAGCATAATCT+TGG 0.414690 8.3:+53165080 None:intergenic
GAGGACAATCATGCACTTCA+TGG 0.415546 8.3:-53168154 MS.gene59896:CDS
TATCTCACCAAGGGTGGTAT+TGG 0.417596 8.3:+53165897 None:intergenic
GCCACAAGATCTTGCATTGG+TGG 0.424734 8.3:+53167483 None:intergenic
TCTGAACCAGGCCACCTAAT+GGG 0.429682 8.3:+53165298 None:intergenic
CAAAGGAATCATAAATTCAA+AGG 0.441039 8.3:+53165740 None:intergenic
GATCTTGCATTGGTGGTTGA+AGG 0.449699 8.3:+53167490 None:intergenic
AGAGCACACTTGCTTACTAA+TGG 0.459202 8.3:-53166321 MS.gene59896:CDS
AACTGAGTAGTCTTTCTCAA+TGG 0.461873 8.3:+53165701 None:intergenic
CATCTCCTCATAGGTGCAAT+GGG 0.462175 8.3:-53165160 MS.gene59896:intron
ATTGATCCCATTAGGTGGCC+TGG 0.478400 8.3:-53165304 MS.gene59896:CDS
TGTTATTGTAGGGGAGAGAA+TGG 0.481096 8.3:-53166067 MS.gene59896:intron
ATGAAGATATTGATCCCATT+AGG 0.481523 8.3:-53165312 MS.gene59896:CDS
CACACTTGCTTACTAATGGT+TGG 0.485940 8.3:-53166317 MS.gene59896:CDS
AAAGGAATCATAAATTCAAA+GGG 0.491970 8.3:+53165741 None:intergenic
AAACATTCAACTTGGAGCAT+TGG 0.497605 8.3:-53165963 MS.gene59896:CDS
ACATCTCCTCATAGGTGCAA+TGG 0.508140 8.3:-53165161 MS.gene59896:intron
ATGCCCTTCAGCATAATCTT+GGG 0.510709 8.3:+53165081 None:intergenic
TGCATGAATCTCCAGGAAGA+AGG 0.528511 8.3:+53166271 None:intergenic
AGGACATGCATGGAATTGAA+TGG 0.531700 8.3:-53167458 MS.gene59896:CDS
TCCATGTCCAATACCACCCT+TGG 0.536464 8.3:-53165904 MS.gene59896:intron
ATCTCCCAAGATTATGCTGA+AGG 0.543976 8.3:-53165085 MS.gene59896:CDS
ATCTTGCATTGGTGGTTGAA+GGG 0.544075 8.3:+53167491 None:intergenic
TCAAGTCAAAACATTCAACT+TGG 0.553845 8.3:-53165971 MS.gene59896:CDS
ATTGAGAAAGACTACTCAGT+TGG 0.556162 8.3:-53165699 MS.gene59896:CDS
TTCGCCACAAGATCTTGCAT+TGG 0.561728 8.3:+53167480 None:intergenic
ATACATCTCCATTCTGAACC+AGG 0.563789 8.3:+53165286 None:intergenic
TAAGCTAAAACAAACCAGAT+GGG 0.570528 8.3:+53168030 None:intergenic
TTCAGAATGGAGATGTATCA+AGG 0.571681 8.3:-53165281 MS.gene59896:intron
TACATTATTTCCATTGCTCG+AGG 0.574951 8.3:-53168500 MS.gene59896:intron
AAATAACTAACCTCGAGCAA+TGG 0.576524 8.3:+53168490 None:intergenic
ATATTGAGAGGGTTTGTCCA+TGG 0.576814 8.3:-53165125 MS.gene59896:CDS
ACCACCAATGCAAGATCTTG+TGG 0.580075 8.3:-53167484 MS.gene59896:CDS
TTTCATACCAAATATTGAGA+GGG 0.580552 8.3:-53165136 MS.gene59896:CDS
AATGCAAGATCTTGTGGCGA+AGG 0.588176 8.3:-53167478 MS.gene59896:CDS
TTAGGTGGCCTGGTTCAGAA+TGG 0.591720 8.3:-53165294 MS.gene59896:CDS
ATTTCATACCAAATATTGAG+AGG 0.595944 8.3:-53165137 MS.gene59896:CDS
AGACTACTCAGTTGGAAGGA+GGG 0.596500 8.3:-53165691 MS.gene59896:CDS
ACCAAGGGTGGTATTGGACA+TGG 0.602110 8.3:+53165903 None:intergenic
AAGACTACTCAGTTGGAAGG+AGG 0.602756 8.3:-53165692 MS.gene59896:CDS
TTGAGAGGGTTTGTCCATGG+TGG 0.604041 8.3:-53165122 MS.gene59896:CDS
AGAAAGACTACTCAGTTGGA+AGG 0.604367 8.3:-53165695 MS.gene59896:CDS
AAGCTAAAACAAACCAGATG+GGG 0.609072 8.3:+53168031 None:intergenic
AACTTCCAATAGAAACAGCA+TGG 0.614686 8.3:+53165930 None:intergenic
CATTGGTATCTCACCAAGGG+TGG 0.616532 8.3:+53165891 None:intergenic
AAGTTGAAGGATGTCCAAGA+AGG 0.624899 8.3:-53165653 MS.gene59896:intron
AGCTAAAACAAACCAGATGG+GGG 0.652605 8.3:+53168032 None:intergenic
TCTCCCAAGATTATGCTGAA+GGG 0.657265 8.3:-53165084 MS.gene59896:CDS
AAGATATTGATCCCATTAGG+TGG 0.658591 8.3:-53165309 MS.gene59896:CDS
CCCAAAGGCTCAATCCACCA+TGG 0.661329 8.3:+53165108 None:intergenic
ATAATCTTGGGAGATCCCAA+AGG 0.675503 8.3:+53165093 None:intergenic
CTTGTGGCGAAGGACATGCA+TGG 0.681360 8.3:-53167468 MS.gene59896:CDS
TCAATGGAAACAAGTACACA+TGG 0.685853 8.3:-53168094 MS.gene59896:CDS
CAGATGTTGTCTGAAGTTGA+AGG 0.687407 8.3:-53165666 MS.gene59896:CDS
ATGGAAACAAGTACACATGG+TGG 0.710626 8.3:-53168091 MS.gene59896:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAA+TGG - chr8.3:53167007-53167026 MS.gene59896:intron 0.0%
!! TATATATATATATATATAAT+GGG - chr8.3:53167008-53167027 MS.gene59896:intron 0.0%
!!! TTTTAATTTAAATAAAATTA+TGG + chr8.3:53165443-53165462 None:intergenic 0.0%
!! AAAATGAATAATAATGTTAT+TGG + chr8.3:53167580-53167599 None:intergenic 10.0%
!! ATTTATTAAATAAAACATCA+TGG + chr8.3:53168495-53168514 None:intergenic 10.0%
!! GTTATAATTAAATAACTTAA+AGG - chr8.3:53167159-53167178 MS.gene59896:intron 10.0%
!! TTGTAAATAATATACTTATT+TGG - chr8.3:53165147-53165166 MS.gene59896:CDS 10.0%
!! TTTATTAAATAAAACATCAT+GGG + chr8.3:53168494-53168513 None:intergenic 10.0%
!!! AAATAAAATAGTTGTATTTT+GGG + chr8.3:53167297-53167316 None:intergenic 10.0%
!!! ATATATTTTATAAAAACATG+TGG + chr8.3:53165384-53165403 None:intergenic 10.0%
!!! TTTTCCTTAAAAAAATTTAA+TGG + chr8.3:53167203-53167222 None:intergenic 10.0%
!! AAAAAAATTGTAATTCTACA+GGG + chr8.3:53165848-53165867 None:intergenic 15.0%
!! AAAGTACAAAAAAACTTAAA+AGG - chr8.3:53167128-53167147 MS.gene59896:intron 15.0%
!! ATATACAATAACATTATCAA+AGG + chr8.3:53165728-53165747 None:intergenic 15.0%
!! ATTTCAAATTGTAAAATCAT+TGG + chr8.3:53167842-53167861 None:intergenic 15.0%
!! CAAAAATCATAAATTCTATA+CGG - chr8.3:53166045-53166064 MS.gene59896:CDS 15.0%
!! CTGTTTCATATAAATAAAAA+GGG - chr8.3:53166403-53166422 MS.gene59896:intron 15.0%
!! GAAGAAACTAAAATAAAATA+CGG + chr8.3:53166905-53166924 None:intergenic 15.0%
!! GTATTTACTAAAATTCATAT+GGG + chr8.3:53168208-53168227 None:intergenic 15.0%
!! TCTGTTTCATATAAATAAAA+AGG - chr8.3:53166402-53166421 MS.gene59896:intron 15.0%
!! TGTATTTACTAAAATTCATA+TGG + chr8.3:53168209-53168228 None:intergenic 15.0%
!! TGTTTCATATAAATAAAAAG+GGG - chr8.3:53166404-53166423 MS.gene59896:intron 15.0%
!!! AAAAATAAACGACAAATTTT+TGG + chr8.3:53166149-53166168 None:intergenic 15.0%
!!! AAGCATTAATTTTTCTTTAA+AGG + chr8.3:53166489-53166508 None:intergenic 15.0%
!!! AATCGTTTTTATAAAAAGTA+TGG + chr8.3:53165331-53165350 None:intergenic 15.0%
!!! AATGTTGAAAATTTAAAACT+AGG - chr8.3:53166518-53166537 MS.gene59896:intron 15.0%
!!! AATTTATGATTTTTGATGTT+TGG + chr8.3:53166040-53166059 None:intergenic 15.0%
!!! ACATTTTTGTTTTACTTTAT+AGG - chr8.3:53168359-53168378 MS.gene59896:intron 15.0%
!!! ATATCTGTTTTATTTGATAA+AGG + chr8.3:53168668-53168687 None:intergenic 15.0%
!!! GAAATAAAATAGTTGTATTT+TGG + chr8.3:53167298-53167317 None:intergenic 15.0%
!!! TATCTGTTTTATTTGATAAA+GGG + chr8.3:53168667-53168686 None:intergenic 15.0%
!!! TTAGCCATTAAATTTTTTTA+AGG - chr8.3:53167196-53167215 MS.gene59896:intron 15.0%
!! AAAACTTAAAACGACTTAAT+TGG - chr8.3:53166689-53166708 MS.gene59896:intron 20.0%
!! AAAGGAATCATAAATTCAAA+GGG + chr8.3:53167975-53167994 None:intergenic 20.0%
!! AAATGGTACAAAAAAAACTA+AGG - chr8.3:53166768-53166787 MS.gene59896:intron 20.0%
!! AATTAACTTAAAGACCTAAA+TGG - chr8.3:53166751-53166770 MS.gene59896:intron 20.0%
!! ACAATTCTTATGTTATTGTA+GGG - chr8.3:53167636-53167655 MS.gene59896:intron 20.0%
!! ATATACTTATTTGGTATTGT+AGG - chr8.3:53165156-53165175 MS.gene59896:intron 20.0%
!! ATCATAATGTCAAATTACTA+TGG - chr8.3:53168085-53168104 MS.gene59896:CDS 20.0%
!! ATGATACTTATAGTCTATAA+AGG - chr8.3:53168308-53168327 MS.gene59896:intron 20.0%
!! CAAAAAAATTGTAATTCTAC+AGG + chr8.3:53165849-53165868 None:intergenic 20.0%
!! GTTTCATATAAATAAAAAGG+GGG - chr8.3:53166405-53166424 MS.gene59896:intron 20.0%
!! TAAATTCATAAAAATATGCG+AGG + chr8.3:53165905-53165924 None:intergenic 20.0%
!! TACAATTCTTATGTTATTGT+AGG - chr8.3:53167635-53167654 MS.gene59896:intron 20.0%
!! TATATGTGTGTATATATACA+AGG - chr8.3:53165805-53165824 MS.gene59896:intron 20.0%
!! TTTATTTCATTGTATTCCAT+GGG - chr8.3:53167497-53167516 MS.gene59896:CDS 20.0%
!! TTTCATATAAATAAAAAGGG+GGG - chr8.3:53166406-53166425 MS.gene59896:intron 20.0%
!!! AATATAATTTGGGTTATTAC+TGG - chr8.3:53165508-53165527 MS.gene59896:intron 20.0%
!!! AATGTATTCCTGATTTTATT+CGG - chr8.3:53166834-53166853 MS.gene59896:intron 20.0%
!!! AGAAAAAAAAAGCATAAAAC+TGG + chr8.3:53167272-53167291 None:intergenic 20.0%
!!! ATACTTAACTTTTTTAACGA+GGG - chr8.3:53168686-53168705 MS.gene59896:CDS 20.0%
!!! CAACTATTTTATTTCAAGAA+TGG - chr8.3:53167303-53167322 MS.gene59896:intron 20.0%
!!! GAAAAAAAAAGCATAAAACT+GGG + chr8.3:53167271-53167290 None:intergenic 20.0%
!!! TAGTTTTTTTTGTACCATTT+AGG + chr8.3:53166768-53166787 None:intergenic 20.0%
!!! TATACTTAACTTTTTTAACG+AGG - chr8.3:53168685-53168704 MS.gene59896:CDS 20.0%
!!! TTTGTTTTACTTTATAGGTA+TGG - chr8.3:53168364-53168383 MS.gene59896:intron 20.0%
!!! TTTTATTTCATTGTATTCCA+TGG - chr8.3:53167496-53167515 MS.gene59896:CDS 20.0%
! AAATACGGAAAACAAAAGTT+AGG + chr8.3:53166890-53166909 None:intergenic 25.0%
! AAGGGAAAAATATGTATAAG+AGG + chr8.3:53166953-53166972 None:intergenic 25.0%
! AGGGAAAAATATGTATAAGA+GGG + chr8.3:53166952-53166971 None:intergenic 25.0%
! AGTCCTTATAAAGCAAAATA+AGG - chr8.3:53165985-53166004 MS.gene59896:CDS 25.0%
! ATTTAATTACATCTCCTCAT+AGG - chr8.3:53168544-53168563 MS.gene59896:intron 25.0%
! ATTTCATACCAAATATTGAG+AGG - chr8.3:53168576-53168595 MS.gene59896:intron 25.0%
! CAAAGGAATCATAAATTCAA+AGG + chr8.3:53167976-53167995 None:intergenic 25.0%
! CAATTCTTATGTTATTGTAG+GGG - chr8.3:53167637-53167656 MS.gene59896:intron 25.0%
! CTAAAAGAGTAGATTTCATT+AGG + chr8.3:53165586-53165605 None:intergenic 25.0%
! TGTCTTTGATACATTGTTAT+AGG - chr8.3:53166193-53166212 MS.gene59896:intron 25.0%
! TTAAAACGACTTAATTGGTA+TGG - chr8.3:53166694-53166713 MS.gene59896:intron 25.0%
! TTATTTGATAAAGGGAGAAT+TGG + chr8.3:53168659-53168678 None:intergenic 25.0%
! TTCATATAAATAAAAAGGGG+GGG - chr8.3:53166407-53166426 MS.gene59896:intron 25.0%
! TTTCATACCAAATATTGAGA+GGG - chr8.3:53168577-53168596 MS.gene59896:intron 25.0%
!! AAAATTTTATGCGTAGTTGT+GGG - chr8.3:53165053-53165072 MS.gene59896:CDS 25.0%
!! AAATGAATTTTTGAATCCCA+TGG + chr8.3:53167516-53167535 None:intergenic 25.0%
!! AATTTTCGACATATTTATCG+TGG - chr8.3:53166278-53166297 MS.gene59896:CDS 25.0%
!! ACTAATACACATCTTTTGTA+GGG - chr8.3:53167944-53167963 MS.gene59896:intron 25.0%
!! ACTACGCATAAAATTTTAGA+AGG + chr8.3:53165050-53165069 None:intergenic 25.0%
!! ATGTATTCCTGATTTTATTC+GGG - chr8.3:53166835-53166854 MS.gene59896:intron 25.0%
!! GAGGTTAGTTATTTCAAATT+TGG - chr8.3:53165232-53165251 MS.gene59896:intron 25.0%
!! GTTAGTTATTTCAAATTTGG+TGG - chr8.3:53165235-53165254 MS.gene59896:intron 25.0%
!! TAAAATTTTATGCGTAGTTG+TGG - chr8.3:53165052-53165071 MS.gene59896:CDS 25.0%
!! TTAGTTTCTTCTTCTTTTGA+GGG - chr8.3:53166914-53166933 MS.gene59896:intron 25.0%
!!! AATTTTAATCTCTCTCAGTA+GGG - chr8.3:53165351-53165370 MS.gene59896:intron 25.0%
!!! ATATATATATAATGGGTGAG+CGG - chr8.3:53167015-53167034 MS.gene59896:intron 25.0%
!!! ATATTTTTAGGGACCATTAT+GGG - chr8.3:53166861-53166880 MS.gene59896:intron 25.0%
!!! CATCCTTATTTTGCTTTATA+AGG + chr8.3:53165991-53166010 None:intergenic 25.0%
!!! TAATTTTAATCTCTCTCAGT+AGG - chr8.3:53165350-53165369 MS.gene59896:intron 25.0%
!!! TTTAGTTTCTTCTTCTTTTG+AGG - chr8.3:53166913-53166932 MS.gene59896:intron 25.0%
AAAAGTTAGGTAACCCATAA+TGG + chr8.3:53166877-53166896 None:intergenic 30.0%
ACATCTTGAATTCATCTCTA+GGG - chr8.3:53166068-53166087 MS.gene59896:intron 30.0%
AGAATGGTGAAATTGGTATT+GGG - chr8.3:53167662-53167681 MS.gene59896:intron 30.0%
AGAGAGATACATACATTCAT+CGG + chr8.3:53166105-53166124 None:intergenic 30.0%
ATAAGCTAAAACAAACCAGA+TGG + chr8.3:53165687-53165706 None:intergenic 30.0%
ATGAAGATATTGATCCCATT+AGG - chr8.3:53168401-53168420 MS.gene59896:intron 30.0%
GGAAAAATATGTATAAGAGG+GGG + chr8.3:53166950-53166969 None:intergenic 30.0%
GGGAAAAATATGTATAAGAG+GGG + chr8.3:53166951-53166970 None:intergenic 30.0%
TAAGCTAAAACAAACCAGAT+GGG + chr8.3:53165686-53165705 None:intergenic 30.0%
TATACACACATATACGATGA+AGG + chr8.3:53165799-53165818 None:intergenic 30.0%
TATAGGTATGGTACAATAGT+TGG - chr8.3:53168376-53168395 MS.gene59896:intron 30.0%
TCAAGTCAAAACATTCAACT+TGG - chr8.3:53167742-53167761 MS.gene59896:intron 30.0%
TTAGAAGGCAAATGATAGTT+AGG + chr8.3:53165035-53165054 None:intergenic 30.0%
! AGGTCAATCATAACTCTTTT+AGG + chr8.3:53166352-53166371 None:intergenic 30.0%
! CACTAATACACATCTTTTGT+AGG - chr8.3:53167943-53167962 MS.gene59896:intron 30.0%
! TGTATTCCTGATTTTATTCG+GGG - chr8.3:53166836-53166855 MS.gene59896:intron 30.0%
!!! GATATTTTTAGGGACCATTA+TGG - chr8.3:53166860-53166879 MS.gene59896:intron 30.0%
!!! TTTTGACTTGATGATAGTTG+AGG + chr8.3:53167733-53167752 None:intergenic 30.0%
AAAACTGGAGAAAAACACAC+TGG - chr8.3:53166580-53166599 MS.gene59896:intron 35.0%
AAACATTCAACTTGGAGCAT+TGG - chr8.3:53167750-53167769 MS.gene59896:intron 35.0%
AAAGCATAAAACTGGGAGAA+TGG + chr8.3:53167264-53167283 None:intergenic 35.0%
AAATAACTAACCTCGAGCAA+TGG + chr8.3:53165226-53165245 None:intergenic 35.0%
AAATCATTGGTATCTCACCA+AGG + chr8.3:53167829-53167848 None:intergenic 35.0%
AACTGAGTAGTCTTTCTCAA+TGG + chr8.3:53168015-53168034 None:intergenic 35.0%
AACTTCCAATAGAAACAGCA+TGG + chr8.3:53167786-53167805 None:intergenic 35.0%
AAGATATTGATCCCATTAGG+TGG - chr8.3:53168404-53168423 MS.gene59896:intron 35.0%
AAGCATAAAACTGGGAGAAT+GGG + chr8.3:53167263-53167282 None:intergenic 35.0%
AAGCTAAAACAAACCAGATG+GGG + chr8.3:53165685-53165704 None:intergenic 35.0%
AATCATTGGTATCTCACCAA+GGG + chr8.3:53167828-53167847 None:intergenic 35.0%
ACAAAAATGCATGAATCTCC+AGG + chr8.3:53167452-53167471 None:intergenic 35.0%
AGGAGAGATAAGACATTCAA+TGG - chr8.3:53166538-53166557 MS.gene59896:intron 35.0%
AGTTGTGGGTGTTCAATTAA+AGG - chr8.3:53165067-53165086 MS.gene59896:CDS 35.0%
ATCTTTACACTGTTCAGACA+CGG - chr8.3:53166802-53166821 MS.gene59896:intron 35.0%
ATTGAGAAAGACTACTCAGT+TGG - chr8.3:53168014-53168033 MS.gene59896:intron 35.0%
CTAATGTTGTCCAATGTCTA+CGG - chr8.3:53166660-53166679 MS.gene59896:intron 35.0%
GACATCTTGAATTCATCTCT+AGG - chr8.3:53166067-53166086 MS.gene59896:intron 35.0%
GAGAATGGTGAAATTGGTAT+TGG - chr8.3:53167661-53167680 MS.gene59896:intron 35.0%
GCAACAAGAATATGCATTAG+AGG - chr8.3:53165540-53165559 MS.gene59896:intron 35.0%
TAATGTTGTCCAATGTCTAC+GGG - chr8.3:53166661-53166680 MS.gene59896:intron 35.0%
TACATTATTTCCATTGCTCG+AGG - chr8.3:53165213-53165232 MS.gene59896:intron 35.0%
TAGTAAGTTGCTCACTTCAA+TGG - chr8.3:53165603-53165622 MS.gene59896:intron 35.0%
TCAATGGAAACAAGTACACA+TGG - chr8.3:53165619-53165638 MS.gene59896:intron 35.0%
TGACATTATGATCACCTTCT+TGG + chr8.3:53168077-53168096 None:intergenic 35.0%
TGCATGACGAGTAGTTATAT+AGG + chr8.3:53166372-53166391 None:intergenic 35.0%
TTCAGAATGGAGATGTATCA+AGG - chr8.3:53168432-53168451 MS.gene59896:intron 35.0%
TTTAAAGGCTGAGATTTCAC+TGG + chr8.3:53166474-53166493 None:intergenic 35.0%
TTTCTTCTGAATCAAGAGTG+AGG + chr8.3:53167106-53167125 None:intergenic 35.0%
! AACTCTAAAAACCTTCTTCC+TGG - chr8.3:53167431-53167450 MS.gene59896:intron 35.0%
! GACTCAGCATAAGTTTTCAA+AGG + chr8.3:53167993-53168012 None:intergenic 35.0%
! GAGATTCATGCATTTTTGTC+AGG - chr8.3:53167453-53167472 MS.gene59896:CDS 35.0%
! GAGGCAATTTTGTGCATATA+TGG + chr8.3:53167714-53167733 None:intergenic 35.0%
! GTATTCCTGATTTTATTCGG+GGG - chr8.3:53166837-53166856 MS.gene59896:intron 35.0%
! TATTCCTGATTTTATTCGGG+GGG - chr8.3:53166838-53166857 MS.gene59896:intron 35.0%
! TTATTCGGGGGGATATTTTT+AGG - chr8.3:53166849-53166868 MS.gene59896:intron 35.0%
! TTTTAAACTCCCGTAGACAT+TGG + chr8.3:53166673-53166692 None:intergenic 35.0%
!! TATTCGGGGGGATATTTTTA+GGG - chr8.3:53166850-53166869 MS.gene59896:intron 35.0%
AAGTTGAAGGATGTCCAAGA+AGG - chr8.3:53168060-53168079 MS.gene59896:CDS 40.0%
AATGCCCTTCAGCATAATCT+TGG + chr8.3:53168636-53168655 None:intergenic 40.0%
AGAAAGACTACTCAGTTGGA+AGG - chr8.3:53168018-53168037 MS.gene59896:intron 40.0%
AGAGCACACTTGCTTACTAA+TGG - chr8.3:53167392-53167411 MS.gene59896:intron 40.0%
AGCTAAAACAAACCAGATGG+GGG + chr8.3:53165684-53165703 None:intergenic 40.0%
AGGACATGCATGGAATTGAA+TGG - chr8.3:53166255-53166274 MS.gene59896:intron 40.0%
ATAATCTTGGGAGATCCCAA+AGG + chr8.3:53168623-53168642 None:intergenic 40.0%
ATACATCTCCATTCTGAACC+AGG + chr8.3:53168430-53168449 None:intergenic 40.0%
ATATCCCCCCGAATAAAATC+AGG + chr8.3:53166845-53166864 None:intergenic 40.0%
ATATTGAGAGGGTTTGTCCA+TGG - chr8.3:53168588-53168607 MS.gene59896:intron 40.0%
ATCTCCCAAGATTATGCTGA+AGG - chr8.3:53168628-53168647 MS.gene59896:intron 40.0%
ATGCCCTTCAGCATAATCTT+GGG + chr8.3:53168635-53168654 None:intergenic 40.0%
ATGGAAACAAGTACACATGG+TGG - chr8.3:53165622-53165641 MS.gene59896:intron 40.0%
CACACTTGCTTACTAATGGT+TGG - chr8.3:53167396-53167415 MS.gene59896:intron 40.0%
GATTCTACACTGCAGAAAAC+TGG - chr8.3:53166565-53166584 MS.gene59896:intron 40.0%
GGACAAACCCTCTCAATATT+TGG + chr8.3:53168587-53168606 None:intergenic 40.0%
GTGTCTGAACAGTGTAAAGA+TGG + chr8.3:53166803-53166822 None:intergenic 40.0%
TCTCCCAAGATTATGCTGAA+GGG - chr8.3:53168629-53168648 MS.gene59896:intron 40.0%
TGTTATTGTAGGGGAGAGAA+TGG - chr8.3:53167646-53167665 MS.gene59896:intron 40.0%
! AGAGAATCCTTTCCCGTTTT+GGG - chr8.3:53166603-53166622 MS.gene59896:intron 40.0%
! AGAGGATTTGAGTTCCTTAG+AGG - chr8.3:53167039-53167058 MS.gene59896:intron 40.0%
! ATCTTGCATTGGTGGTTGAA+GGG + chr8.3:53166225-53166244 None:intergenic 40.0%
! CAGATGTTGTCTGAAGTTGA+AGG - chr8.3:53168047-53168066 MS.gene59896:CDS 40.0%
! CATCTATCTGCATGTTGCTT+TGG + chr8.3:53165658-53165677 None:intergenic 40.0%
! TTTGAGTTCCTTAGAGGTGA+CGG - chr8.3:53167045-53167064 MS.gene59896:intron 40.0%
!! CTTCTTTTGAGGGTTCGTTT+TGG - chr8.3:53166924-53166943 MS.gene59896:intron 40.0%
!! GTTGTCCATGCTGTTTCTAT+TGG - chr8.3:53167778-53167797 MS.gene59896:intron 40.0%
!!! AATAAAAAGGGGGGGTGTTT+TGG - chr8.3:53166415-53166434 MS.gene59896:intron 40.0%
!!! ATAAAAAGGGGGGGTGTTTT+GGG - chr8.3:53166416-53166435 MS.gene59896:intron 40.0%
AAGACTACTCAGTTGGAAGG+AGG - chr8.3:53168021-53168040 MS.gene59896:intron 45.0%
AATGCAAGATCTTGTGGCGA+AGG - chr8.3:53166235-53166254 MS.gene59896:intron 45.0%
ACATCTCCTCATAGGTGCAA+TGG - chr8.3:53168552-53168571 MS.gene59896:intron 45.0%
ACCACCAATGCAAGATCTTG+TGG - chr8.3:53166229-53166248 MS.gene59896:intron 45.0%
AGACTACTCAGTTGGAAGGA+GGG - chr8.3:53168022-53168041 MS.gene59896:intron 45.0%
AGGGGAGAGAATGGTGAAAT+TGG - chr8.3:53167655-53167674 MS.gene59896:intron 45.0%
CATACCATCAACCCCAAAAC+GGG + chr8.3:53166618-53166637 None:intergenic 45.0%
CATCTCCTCATAGGTGCAAT+GGG - chr8.3:53168553-53168572 MS.gene59896:intron 45.0%
CCATACCATCAACCCCAAAA+CGG + chr8.3:53166619-53166638 None:intergenic 45.0%
GAAATCCCATTGCACCTATG+AGG + chr8.3:53168561-53168580 None:intergenic 45.0%
GAGGACAATCATGCACTTCA+TGG - chr8.3:53165559-53165578 MS.gene59896:intron 45.0%
TACACTGTTCAGACACGGTT+TGG - chr8.3:53166807-53166826 MS.gene59896:intron 45.0%
TATCTCACCAAGGGTGGTAT+TGG + chr8.3:53167819-53167838 None:intergenic 45.0%
TGCATGAATCTCCAGGAAGA+AGG + chr8.3:53167445-53167464 None:intergenic 45.0%
TTCACTGGACTCTACAGTGA+CGG + chr8.3:53166459-53166478 None:intergenic 45.0%
TTCGCCACAAGATCTTGCAT+TGG + chr8.3:53166236-53166255 None:intergenic 45.0%
! GAGAATCCTTTCCCGTTTTG+GGG - chr8.3:53166604-53166623 MS.gene59896:intron 45.0%
! GAGAGAATCCTTTCCCGTTT+TGG - chr8.3:53166602-53166621 MS.gene59896:intron 45.0%
! GATCTTGCATTGGTGGTTGA+AGG + chr8.3:53166226-53166245 None:intergenic 45.0%
!! TTGGGGTTGATGGTATGGTT+TGG - chr8.3:53166621-53166640 MS.gene59896:intron 45.0%
!!! TAAAAAGGGGGGGTGTTTTG+GGG - chr8.3:53166417-53166436 MS.gene59896:intron 45.0%
!! AAAAAAAATGAATATAATTT+GGG - chr8.3:53165498-53165517 MS.gene59896:intron 5.0%
!! ATATATATATATAGAAAAAA+GGG + chr8.3:53166971-53166990 None:intergenic 5.0%
!! TAAAAAAAATGAATATAATT+TGG - chr8.3:53165497-53165516 MS.gene59896:intron 5.0%
!! TATATATATATATAGAAAAA+AGG + chr8.3:53166972-53166991 None:intergenic 5.0%
AGATAGATGCTTCCCCCATC+TGG - chr8.3:53165669-53165688 MS.gene59896:CDS 50.0%
ATTGATCCCATTAGGTGGCC+TGG - chr8.3:53168409-53168428 MS.gene59896:intron 50.0%
CATCAACCCCAAAACGGGAA+AGG + chr8.3:53166613-53166632 None:intergenic 50.0%
CATTGGTATCTCACCAAGGG+TGG + chr8.3:53167825-53167844 None:intergenic 50.0%
GCCACAAGATCTTGCATTGG+TGG + chr8.3:53166233-53166252 None:intergenic 50.0%
GGAAGACATCAAAGAGCCGT+TGG + chr8.3:53167085-53167104 None:intergenic 50.0%
TCCATGTCCAATACCACCCT+TGG - chr8.3:53167809-53167828 MS.gene59896:intron 50.0%
TCTGAACCAGGCCACCTAAT+GGG + chr8.3:53168418-53168437 None:intergenic 50.0%
TTAGGTGGCCTGGTTCAGAA+TGG - chr8.3:53168419-53168438 MS.gene59896:intron 50.0%
TTCTGAACCAGGCCACCTAA+TGG + chr8.3:53168419-53168438 None:intergenic 50.0%
TTGAGAGGGTTTGTCCATGG+TGG - chr8.3:53168591-53168610 MS.gene59896:intron 50.0%
! ACCAAGGGTGGTATTGGACA+TGG + chr8.3:53167813-53167832 None:intergenic 50.0%
! ACTGTTCAGACACGGTTTGG+CGG - chr8.3:53166810-53166829 MS.gene59896:intron 50.0%
! TTAGAGGTGACGGCCTAGTT+GGG - chr8.3:53167055-53167074 MS.gene59896:intron 50.0%
!! ATATAATGGGTGAGCGGCAG+AGG - chr8.3:53167021-53167040 MS.gene59896:intron 50.0%
!! CCATGGTGGATTGAGCCTTT+GGG - chr8.3:53168605-53168624 MS.gene59896:intron 50.0%
!! TCCATGGTGGATTGAGCCTT+TGG - chr8.3:53168604-53168623 MS.gene59896:intron 50.0%
!!! AAAAAGGGGGGGTGTTTTGG+GGG - chr8.3:53166418-53166437 MS.gene59896:intron 50.0%
!!! CCGTTTTGGGGTTGATGGTA+TGG - chr8.3:53166616-53166635 MS.gene59896:intron 50.0%
!!! CTTTCCCGTTTTGGGGTTGA+TGG - chr8.3:53166611-53166630 MS.gene59896:intron 50.0%
AGCCGTTGGACATCCCAACT+AGG + chr8.3:53167071-53167090 None:intergenic 55.0%
CAACTAGGCCGTCACCTCTA+AGG + chr8.3:53167056-53167075 None:intergenic 55.0%
CCCAAAGGCTCAATCCACCA+TGG + chr8.3:53168608-53168627 None:intergenic 55.0%
CTTGTGGCGAAGGACATGCA+TGG - chr8.3:53166245-53166264 MS.gene59896:intron 55.0%
GGCCTAGTTGGGATGTCCAA+CGG - chr8.3:53167066-53167085 MS.gene59896:intron 55.0%
! CTTAGAGGTGACGGCCTAGT+TGG - chr8.3:53167054-53167073 MS.gene59896:intron 55.0%
!!! AAAAGGGGGGGTGTTTTGGG+GGG - chr8.3:53166419-53166438 MS.gene59896:intron 55.0%
GGACTCTACAGTGACGGCAG+AGG + chr8.3:53166453-53166472 None:intergenic 60.0%
!!! AAAGGGGGGGTGTTTTGGGG+GGG - chr8.3:53166420-53166439 MS.gene59896:intron 60.0%
!!! GGGGGTGTTTTGGGGGGGAA+TGG - chr8.3:53166425-53166444 MS.gene59896:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 53165023 53168712 53165023 ID=MS.gene59896
chr8.3 mRNA 53165023 53168712 53165023 ID=MS.gene59896.t1;Parent=MS.gene59896
chr8.3 exon 53168647 53168712 53168647 ID=MS.gene59896.t1.exon1;Parent=MS.gene59896.t1
chr8.3 CDS 53168647 53168712 53168647 ID=cds.MS.gene59896.t1;Parent=MS.gene59896.t1
chr8.3 exon 53168501 53168557 53168501 ID=MS.gene59896.t1.exon2;Parent=MS.gene59896.t1
chr8.3 CDS 53168501 53168557 53168501 ID=cds.MS.gene59896.t1;Parent=MS.gene59896.t1
chr8.3 exon 53168045 53168194 53168045 ID=MS.gene59896.t1.exon3;Parent=MS.gene59896.t1
chr8.3 CDS 53168045 53168194 53168045 ID=cds.MS.gene59896.t1;Parent=MS.gene59896.t1
chr8.3 exon 53167436 53167520 53167436 ID=MS.gene59896.t1.exon4;Parent=MS.gene59896.t1
chr8.3 CDS 53167436 53167520 53167436 ID=cds.MS.gene59896.t1;Parent=MS.gene59896.t1
chr8.3 exon 53166261 53166351 53166261 ID=MS.gene59896.t1.exon5;Parent=MS.gene59896.t1
chr8.3 CDS 53166261 53166351 53166261 ID=cds.MS.gene59896.t1;Parent=MS.gene59896.t1
chr8.3 exon 53165905 53166078 53165905 ID=MS.gene59896.t1.exon6;Parent=MS.gene59896.t1
chr8.3 CDS 53165905 53166078 53165905 ID=cds.MS.gene59896.t1;Parent=MS.gene59896.t1
chr8.3 exon 53165654 53165770 53165654 ID=MS.gene59896.t1.exon7;Parent=MS.gene59896.t1
chr8.3 CDS 53165654 53165770 53165654 ID=cds.MS.gene59896.t1;Parent=MS.gene59896.t1
chr8.3 exon 53165282 53165354 53165282 ID=MS.gene59896.t1.exon8;Parent=MS.gene59896.t1
chr8.3 CDS 53165282 53165354 53165282 ID=cds.MS.gene59896.t1;Parent=MS.gene59896.t1
chr8.3 exon 53165023 53165169 53165023 ID=MS.gene59896.t1.exon9;Parent=MS.gene59896.t1
chr8.3 CDS 53165023 53165169 53165023 ID=cds.MS.gene59896.t1;Parent=MS.gene59896.t1
Gene Sequence

>MS.gene59896

ATGGAAATTCCTAACTATCATTTGCCTTCTAAAATTTTATGCGTAGTTGTGGGTGTTCAATTAAAGGTATTGTCATCTTTCTATAAGTTTATTGTTTTTATTAACTTAAAATGTTTAATGCGTATTGTAAATAATATACTTATTTGGTATTGTAGGTAAAAGTTGACACAGATGAGATTTTTTCTCTAGTTACATTATTTCCATTGCTCGAGGTTAGTTATTTCAAATTTGGTGGTAAATATATTTTTAGTGTCTATAGATATTCTTTTTTTTTCTCTATCTTAAATAAAACATGAGATTTTAGTCCATACTTTTTATAAAAACGATTAATTTTAATCTCTCTCAGTAGGGACTCAAACCACATGTTTTTATAAAATATATGACTCAAATTTTATATAGAGACTCAATTTGAAAGATCCATAATTTTATTTAAATTAAAAACATTTAACTCTTCTAATATCGTGTGTGTAAAGATAAAAAAAATGAATATAATTTGGGTTATTACTGGATGATTGCAGCAACAAGAATATGCATTAGAGGACAATCATGCACTTCATGGTCCTAATGAAATCTACTCTTTTAGTAAGTTGCTCACTTCAATGGAAACAAGTACACATGGTGGACTTTATATTCCAAAGCAACATGCAGATAGATGCTTCCCCCATCTGGTTTGTTTTAGCTTATGCTTGTGATTCTTTATTGCCTTTGATAATGTTATTGTATATTTTCTTTGATTAACATGACATAATTTTCAATTGTCAATGTCATTCTATCCTTCATCGTATATGTGTGTATATATACAAGGTTAAATATATTTTTAGTCCCTGTAGAATTACAATTTTTTTGTTAACACTTGTATAAGTTTAATTCAAATTTTGTCCTCGCATATTTTTATGAATTTATACAAGAAAAATTATTTTAGTACTTGAAATTGTTTTCTTAAACAACAAATGTTAGTATTTAGTCCTTATAAAGCAAAATAAGGATGAAAGTTGTACAAACTTTATATCGAGACCAAACATCAAAAATCATAAATTCTATACGGACATCTTGAATTCATCTCTAGGGACATATTGAAACCGATGAATGTATGTATCTCTCTACACTTGTGTAAATGTTTTTACCAAAAATTTGTCGTTTATTTTTTTTAAGAATTCTGTTTTAGTTTCATGTCTTTGATACATTGTTATAGGATATGACCCTTCAACCACCAATGCAAGATCTTGTGGCGAAGGACATGCATGGAATTGAATGGAATTTTCGACATATTTATCGTGGTAAGTTTAAGTTGTTTTATTTAAACATTAATATTAACTTCATTGTTAACCTAAAAGAGTTATGATTGACCTATATAACTACTCGTCATGCACAAAATCATCTCTGTTTCATATAAATAAAAAGGGGGGGTGTTTTGGGGGGGAATGGATCCTCTGCCGTCACTGTAGAGTCCAGTGAAATCTCAGCCTTTAAAGAAAAATTAATGCTTAAAAATATAAATGTTGAAAATTTAAAACTAGGAGAGATAAGACATTCAATGGTATAGATTCTACACTGCAGAAAACTGGAGAAAAACACACTGGAGAGAATCCTTTCCCGTTTTGGGGTTGATGGTATGGTTTGGTGATAATTGAGTCTTTCTAATGTTGTCCAATGTCTACGGGAGTTTAAAACTTAAAACGACTTAATTGGTATGGAAAAAAAAACTTAAAGAACTAACTTGTTACAATTAATTAACTTAAAGACCTAAATGGTACAAAAAAAACTAAGGTTGATCTAACCATCTTTACACTGTTCAGACACGGTTTGGCGGAAATGTATTCCTGATTTTATTCGGGGGGATATTTTTAGGGACCATTATGGGTTACCTAACTTTTGTTTTCCGTATTTTATTTTAGTTTCTTCTTCTTTTGAGGGTTCGTTTTGGCCCCCTCTTATACATATTTTTCCCTTTTTTCTATATATATATATATATATATATATATATATATATATATATATATATAATGGGTGAGCGGCAGAGGATTTGAGTTCCTTAGAGGTGACGGCCTAGTTGGGATGTCCAACGGCTCTTTGATGTCTTCCTCACTCTTGATTCAGAAGAAAAAAAAGTACAAAAAAACTTAAAAGGACAAATTTGTTATAATTAAATAACTTAAAGGACGTTTGATGTAATTTAGCCATTAAATTTTTTTAAGGAAAATTGTAAAATGATCGTAGTGTCACTGTAATAAAAATTGCCCATTCTCCCAGTTTTATGCTTTTTTTTTCTCTCCCAAAATACAACTATTTTATTTCAAGAATGGAATCATTATTTATTTATTTTTCTTTCTAAGTTATATATTCTTATAACATGAAATGCAGATGATGAGAGAGCACACTTGCTTACTAATGGTTGGAGCACATTTGTCAACTCTAAAAACCTTCTTCCTGGAGATTCATGCATTTTTGTCAGGTTCTCTCTTTTTTTCTTCATTTTTATTTCATTGTATTCCATGGGATTCAAAAATTCATTTCAATCTATAAATTCTCTTGTAATTGACAATTTATGCATCTACCAATAACATTATTATTCATTTTGTACACATTAATTTTATGTCATAGAAATTTACGTGTACAATTCTTATGTTATTGTAGGGGAGAGAATGGTGAAATTGGTATTGGGATTCGTCGAGCAATGAATCAACATAGCCATATATGCACAAAATTGCCTCAACTATCATCAAGTCAAAACATTCAACTTGGAGCATTGGCTGCTGTTGTCCATGCTGTTTCTATTGGAAGTTTGTTCCATGTCCAATACCACCCTTGGTGAGATACCAATGATTTTACAATTTGAAATATTTATGAACATTTTTTTTTTTCAAGCAATGCAAATTTGTAAATATATGCTCTTTGAGAATCTGTTTTGAAAGAATGTTAGCACTAATACACATCTTTTGTAGGGTTACTCCCTTTGAATTTATGATTCCTTTGAAAACTTATGCTGAGTCCATTGAGAAAGACTACTCAGTTGGAAGGAGGGTACAGATGTTGTCTGAAGTTGAAGGATGTCCAAGAAGGTGATCATAATGTCAAATTACTATGGTTAATTCATGATTGTTTTATCACTTTTATGAGAAGTGCGAATAATATACGTTTTAACATAGATTTTTCAATATTCGTCTTTCTGTCAGTTAGTCAGACCCATATGAATTTTAGTAAATACAAAGACGTAATAAAAAGAGTGTATTGCTAGCATTTTTCGTGTTTTGATTTGAAATATATGCATCTATGACAAAACTGTTTATGATACTTATAGTCTATAAAGGTAACTATTTGTAATAATTTTGTATTTTTACATTTTTGTTTTACTTTATAGGTATGGTACAATAGTTGGTAATGAAGATATTGATCCCATTAGGTGGCCTGGTTCAGAATGGAGATGTATCAAGGTAAAATCAAATATCTTACTATGCTTTAGAATTAGTACCCATGATGTTTTATTTAATAAATTTTTCTTTTAACTTGATTAATTTAAATAAATTTAATTACATCTCCTCATAGGTGCAATGGGATTTCATACCAAATATTGAGAGGGTTTGTCCATGGTGGATTGAGCCTTTGGGATCTCCCAAGATTATGCTGAAGGGCATTCCAATTCTCCCTTTATCAAATAAAACAGATATACTTAACTTTTTTAACGAGGGTTAG
Protein sequence

>MS.gene59896.t1

MEIPNYHLPSKILCVVVGVQLKVKVDTDEIFSLVTLFPLLEQQEYALEDNHALHGPNEIYSFSKLLTSMETSTHGGLYIPKQHADRCFPHLDMTLQPPMQDLVAKDMHGIEWNFRHIYRDDERAHLLTNGWSTFVNSKNLLPGDSCIFVRGENGEIGIGIRRAMNQHSHICTKLPQLSSSQNIQLGALAAVVHAVSIGSLFHVQYHPWVTPFEFMIPLKTYAESIEKDYSVGRRVQMLSEVEGCPRRYGTIVGNEDIDPIRWPGSEWRCIKVQWDFIPNIERVCPWWIEPLGSPKIMLKGIPILPLSNKTDILNFFNEG