Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60455.t1 | XP_003599125.1 | 97 | 465 | 11 | 2 | 1 | 464 | 1 | 463 | 4.30E-223 | 783.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60455.t1 | E0X9N4 | 54.9 | 319 | 129 | 7 | 1 | 307 | 1 | 316 | 1.9e-73 | 278.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60455.t1 | G7IWL7 | 97.0 | 465 | 11 | 2 | 1 | 464 | 1 | 463 | 3.1e-223 | 783.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene60455.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60455.t1 | MTR_3g028170 | 97.930 | 483 | 7 | 2 | 1 | 482 | 1 | 481 | 0.0 | 981 |
| MS.gene60455.t1 | MTR_3g028190 | 52.888 | 329 | 126 | 8 | 1 | 307 | 1 | 322 | 1.03e-106 | 322 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60455.t1 | AT3G08505 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 1.24e-99 | 302 |
| MS.gene60455.t1 | AT3G08505 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 1.24e-99 | 302 |
| MS.gene60455.t1 | AT3G08505 | 51.125 | 311 | 125 | 8 | 1 | 307 | 1 | 288 | 1.24e-99 | 302 |
Find 109 sgRNAs with CRISPR-Local
Find 382 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCAAGAGGCCATGGTTTC+TGG | 0.092914 | 3.2:+19606458 | MS.gene60455:CDS |
| CCTGCATCCTACTGATAAAA+AGG | 0.246259 | 3.2:+19602688 | MS.gene60455:CDS |
| GTTTCTGGGATAGATGATTT+TGG | 0.250360 | 3.2:+19606473 | MS.gene60455:CDS |
| CAGAAAGGGTCTTGTGCTTA+TGG | 0.259648 | 3.2:+19602344 | MS.gene60455:CDS |
| GATTCGCTGGCTGGCGGTTC+AGG | 0.263297 | 3.2:+19606278 | MS.gene60455:CDS |
| AGCATCATCTTCAGCATCTA+TGG | 0.292528 | 3.2:+19602403 | MS.gene60455:CDS |
| TTTGAGGACTTGTGACAAAA+AGG | 0.300862 | 3.2:+19602724 | MS.gene60455:CDS |
| GCTCTTGGGATGGATGCTTT+TGG | 0.301364 | 3.2:+19606383 | MS.gene60455:CDS |
| TTGTCATTCCAAGTGGTATT+TGG | 0.301592 | 3.2:+19602987 | MS.gene60455:CDS |
| AAGCCATCGGAATGTAAGTT+TGG | 0.302457 | 3.2:+19602824 | MS.gene60455:CDS |
| GCGCTAAAGTAGCATCAAAT+TGG | 0.305775 | 3.2:+19602456 | MS.gene60455:CDS |
| TGGCGGTTCAGGTCCTTGTT+TGG | 0.314287 | 3.2:+19606289 | MS.gene60455:CDS |
| GGCGGTTCAGGTCCTTGTTT+GGG | 0.319796 | 3.2:+19606290 | MS.gene60455:CDS |
| GGAAATGGAAATTGTCCATT+TGG | 0.321258 | 3.2:+19603194 | MS.gene60455:CDS |
| TCCTCATCGTCATCGTCATC+AGG | 0.328553 | 3.2:-19606407 | None:intergenic |
| ATGCAAGAGGCCATGGCTCT+TGG | 0.356930 | 3.2:+19606368 | MS.gene60455:CDS |
| CAGAAAGCATGATCACATTC+TGG | 0.360354 | 3.2:-19602854 | None:intergenic |
| TATGATAGTTTGCGGCAAAC+AGG | 0.366308 | 3.2:-19602962 | None:intergenic |
| GAAATGGAAATTGTCCATTT+GGG | 0.373127 | 3.2:+19603195 | MS.gene60455:CDS |
| CGATTTCCATTGCAGAGGTT+GGG | 0.374375 | 3.2:-19602910 | None:intergenic |
| CCCTTTACGCCACGCTTGTC+AGG | 0.376758 | 3.2:-19602506 | None:intergenic |
| CCTGACAAGCGTGGCGTAAA+GGG | 0.379956 | 3.2:+19602506 | MS.gene60455:CDS |
| GTTTGTCATGTATCCGCAAT+TGG | 0.381206 | 3.2:+19602876 | MS.gene60455:CDS |
| AACTTACATTCCGATGGCTT+GGG | 0.407179 | 3.2:-19602821 | None:intergenic |
| TGCAAGAGGCCATGGTTTCT+GGG | 0.408782 | 3.2:+19606459 | MS.gene60455:CDS |
| TGCAAGAGGCCATGGCTCTT+GGG | 0.417374 | 3.2:+19606369 | MS.gene60455:CDS |
| AAACTTACATTCCGATGGCT+TGG | 0.421961 | 3.2:-19602822 | None:intergenic |
| TCAATTCCATGAAAATCATC+AGG | 0.425647 | 3.2:-19606497 | None:intergenic |
| ACCTGACAAGCGTGGCGTAA+AGG | 0.437739 | 3.2:+19602505 | MS.gene60455:CDS |
| GATAATGCCATCATCTCAAA+TGG | 0.443626 | 3.2:-19606254 | None:intergenic |
| AAAATCTCACCATGTCCAAC+AGG | 0.444234 | 3.2:+19601347 | None:intergenic |
| CGCTAAAGTAGCATCAAATT+GGG | 0.445718 | 3.2:+19602457 | MS.gene60455:CDS |
| AGCCATCGGAATGTAAGTTT+GGG | 0.449644 | 3.2:+19602825 | MS.gene60455:CDS |
| CCGATTTCCATTGCAGAGGT+TGG | 0.450187 | 3.2:-19602911 | None:intergenic |
| GATTCAGACGATGAGGATGA+TGG | 0.450779 | 3.2:+19606320 | MS.gene60455:CDS |
| CCAACCTCTGCAATGGAAAT+CGG | 0.452415 | 3.2:+19602911 | MS.gene60455:CDS |
| ACTTTAGCGCTGCGAGCCAC+AGG | 0.455994 | 3.2:-19602443 | None:intergenic |
| TTTGCTCTTATTATCAGAAA+GGG | 0.457240 | 3.2:+19602330 | MS.gene60455:CDS |
| ACATGTCATGCATATCGAAA+TGG | 0.462288 | 3.2:-19606148 | None:intergenic |
| TGCTGCTATGCAAGAGGCCA+TGG | 0.469668 | 3.2:+19606361 | MS.gene60455:CDS |
| ATTTGCTCTTATTATCAGAA+AGG | 0.469932 | 3.2:+19602329 | MS.gene60455:CDS |
| GCTCGAGGCGTTTGTTTGAA+AGG | 0.470915 | 3.2:+19602004 | MS.gene60455:CDS |
| GGGTTTACAACGCAAGCATC+AGG | 0.478209 | 3.2:+19602526 | MS.gene60455:CDS |
| GCATTATCAGATTCGCTGGC+TGG | 0.489570 | 3.2:+19606269 | MS.gene60455:CDS |
| AATGGATCCATTTGAGATGA+TGG | 0.491467 | 3.2:+19606247 | MS.gene60455:CDS |
| GATTTCCATTGCAGAGGTTG+GGG | 0.493235 | 3.2:-19602909 | None:intergenic |
| TAGAAACAGCTAGCCCCAAA+TGG | 0.494880 | 3.2:-19603209 | None:intergenic |
| GGCTGCTATGCAAGAGGCCA+TGG | 0.495488 | 3.2:+19606451 | MS.gene60455:CDS |
| TGGTCTAGCACTACCAGTAC+TGG | 0.497170 | 3.2:-19602570 | None:intergenic |
| TGTCTCCATGTGTATGAGCC+AGG | 0.499940 | 3.2:-19606095 | None:intergenic |
| TCCTCATCGTCTGAATCAAA+AGG | 0.507460 | 3.2:-19606314 | None:intergenic |
| GAAGGAACCTTTGTAACCTT+CGG | 0.509713 | 3.2:-19602482 | None:intergenic |
| AGGGCAGGTTCTCACTGTAT+TGG | 0.515799 | 3.2:-19602942 | None:intergenic |
| GATGGCATTATCAGATTCGC+TGG | 0.519486 | 3.2:+19606265 | MS.gene60455:CDS |
| TTTGCTGCTGCCAACTGCCC+CGG | 0.519590 | 3.2:+19602614 | MS.gene60455:CDS |
| TAGTTTGCGGCAAACAGGGC+AGG | 0.521329 | 3.2:-19602957 | None:intergenic |
| TGACAAAATATGATAGTTTG+CGG | 0.523339 | 3.2:-19602970 | None:intergenic |
| TTCAGATTCTGCTGTGCCTG+TGG | 0.528627 | 3.2:+19602427 | MS.gene60455:CDS |
| TGAATACGAGAACATCCGCC+GGG | 0.529114 | 3.2:-19602632 | None:intergenic |
| AGAACATCCGCCGGGGCAGT+TGG | 0.529403 | 3.2:-19602624 | None:intergenic |
| AAAATCTGAGTCCCTCATGA+TGG | 0.533480 | 3.2:-19606216 | None:intergenic |
| TGGGGCTAGCTGTTTCTACA+AGG | 0.535393 | 3.2:+19603214 | MS.gene60455:CDS |
| ATTCAGACGATGAGGATGAT+GGG | 0.536703 | 3.2:+19606321 | MS.gene60455:CDS |
| TTTCAGCATACAGTGAAGCC+TGG | 0.555178 | 3.2:+19606077 | MS.gene60455:intron |
| ATGATAGTTTGCGGCAAACA+GGG | 0.556192 | 3.2:-19602961 | None:intergenic |
| GATATCAAAGCTGCATCCAT+AGG | 0.558891 | 3.2:-19606521 | None:intergenic |
| TCAAATTGCTGCTATGCAAG+AGG | 0.561508 | 3.2:+19606355 | MS.gene60455:CDS |
| CATCAGGACTCTACCGATGT+TGG | 0.562367 | 3.2:+19602542 | MS.gene60455:CDS |
| TGGTATTTGGTTTACTACAA+AGG | 0.568402 | 3.2:+19603000 | MS.gene60455:CDS |
| GATGTTGGTGAATCCAGTAC+TGG | 0.570914 | 3.2:+19602557 | MS.gene60455:CDS |
| GGCGGATGTTCTCGTATTCA+CGG | 0.571733 | 3.2:+19602635 | MS.gene60455:CDS |
| AGCATCAAATTGGGTTCCGA+AGG | 0.575611 | 3.2:+19602466 | MS.gene60455:CDS |
| TGCGTTGAGGTGGTGGCCTG+CGG | 0.577755 | 3.2:-19606118 | None:intergenic |
| TAGTGCCCCAACCTCTGCAA+TGG | 0.580807 | 3.2:+19602904 | MS.gene60455:CDS |
| TTTCGATATGCATGACATGT+TGG | 0.582133 | 3.2:+19606151 | MS.gene60455:CDS |
| CCTCATCGTCATCGTCATCA+GGG | 0.582725 | 3.2:-19606406 | None:intergenic |
| TCGAATGGCTGCTATGCAAG+AGG | 0.583412 | 3.2:+19606445 | MS.gene60455:CDS |
| AAGATGATGCTTGAGAAGCT+CGG | 0.587317 | 3.2:-19602391 | None:intergenic |
| AGAGGCCATGGCTCTTGGGA+TGG | 0.587677 | 3.2:+19606373 | MS.gene60455:CDS |
| GGTCTTGTGCTTATGGTAGT+CGG | 0.588927 | 3.2:+19602351 | MS.gene60455:CDS |
| TTGGGTTCCGAAGGTTACAA+AGG | 0.589756 | 3.2:+19602475 | MS.gene60455:CDS |
| ACGCCACGCTTGTCAGGTGA+AGG | 0.590498 | 3.2:-19602500 | None:intergenic |
| AACCCAAACTTACATTCCGA+TGG | 0.591858 | 3.2:-19602827 | None:intergenic |
| CCTTTCAAAACCCAAGCCAT+CGG | 0.592673 | 3.2:+19602811 | MS.gene60455:CDS |
| GCTGCTGCCAACTGCCCCGG+CGG | 0.595992 | 3.2:+19602617 | MS.gene60455:CDS |
| AGCATCCATCCCAAGAGCCA+TGG | 0.600499 | 3.2:-19606378 | None:intergenic |
| ATCATCTATCCCAGAAACCA+TGG | 0.600753 | 3.2:-19606468 | None:intergenic |
| TTATCAGATTCGCTGGCTGG+CGG | 0.606192 | 3.2:+19606272 | MS.gene60455:CDS |
| GTGAATACGAGAACATCCGC+CGG | 0.606994 | 3.2:-19602633 | None:intergenic |
| TGAAGCCTGGCTCATACACA+TGG | 0.611090 | 3.2:+19606090 | MS.gene60455:CDS |
| AAATGGAAATTGTCCATTTG+GGG | 0.614806 | 3.2:+19603196 | MS.gene60455:CDS |
| ATAACTACAAGGCAAACTGC+AGG | 0.617185 | 3.2:+19603044 | MS.gene60455:CDS |
| CATGACATGTTGGATGTGCT+CGG | 0.619477 | 3.2:+19606161 | MS.gene60455:CDS |
| GTAGTAAACCAAATACCACT+TGG | 0.621876 | 3.2:-19602995 | None:intergenic |
| GGAAATTATTGATAACTACA+AGG | 0.622897 | 3.2:+19603033 | MS.gene60455:CDS |
| GAATCAAAAGGACCCAAACA+AGG | 0.628395 | 3.2:-19606302 | None:intergenic |
| GGGCACTACTACGCCAATTG+CGG | 0.634177 | 3.2:-19602889 | None:intergenic |
| AATGATGATGCATTCTCATG+TGG | 0.638460 | 3.2:+19606544 | MS.gene60455:CDS |
| GGTGAGGTTGATCTATCAAG+TGG | 0.638628 | 3.2:+19606182 | MS.gene60455:CDS |
| ACTACCGATTTCCATTGCAG+AGG | 0.647818 | 3.2:-19602915 | None:intergenic |
| TGAGATTTACCTGTTGGACA+TGG | 0.648362 | 3.2:-19601356 | None:intergenic |
| CATACACATGGAGACACCGC+AGG | 0.651112 | 3.2:+19606102 | MS.gene60455:CDS |
| CAATTCCATGAAAATCATCA+GGG | 0.655793 | 3.2:-19606496 | None:intergenic |
| AGTACTGGATTCACCAACAT+CGG | 0.669244 | 3.2:-19602555 | None:intergenic |
| GTTCCTTCACCTGACAAGCG+TGG | 0.671133 | 3.2:+19602497 | MS.gene60455:CDS |
| CCCTGATGACGATGACGATG+AGG | 0.676584 | 3.2:+19606406 | MS.gene60455:CDS |
| AGAAGAAGATGAAGATTACG+AGG | 0.692698 | 3.2:+19606574 | MS.gene60455:CDS |
| CATGTTGGATGTGCTCGGTG+AGG | 0.698239 | 3.2:+19606166 | MS.gene60455:CDS |
| GAATACGAGAACATCCGCCG+GGG | 0.781384 | 3.2:-19602631 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAAAATTTAATTAAAA+GGG | + | chr3.2:19605857-19605876 | MS.gene60455:intron | 0.0% |
| !! | TTTATAAAAATTTAATTAAA+AGG | + | chr3.2:19605856-19605875 | MS.gene60455:intron | 0.0% |
| !!! | ATTTTTAAAATTTAATTTTT+AGG | + | chr3.2:19601728-19601747 | MS.gene60455:intron | 0.0% |
| !!! | TTTTTAAAATTTAATTTTTA+GGG | + | chr3.2:19601729-19601748 | MS.gene60455:intron | 0.0% |
| !! | TTACTAATATAATACATTAT+TGG | + | chr3.2:19604856-19604875 | MS.gene60455:intron | 10.0% |
| !! | AACAACATAAATAATCAAAT+GGG | - | chr3.2:19601504-19601523 | None:intergenic | 15.0% |
| !! | CCTAAAATACTATAAAATAT+CGG | + | chr3.2:19605923-19605942 | MS.gene60455:intron | 15.0% |
| !! | CTAAAATACTATAAAATATC+GGG | + | chr3.2:19605924-19605943 | MS.gene60455:intron | 15.0% |
| !! | TAAATTTATGAATTGTTTCA+GGG | + | chr3.2:19601967-19601986 | MS.gene60455:intron | 15.0% |
| !! | TAACAACATAAATAATCAAA+TGG | - | chr3.2:19601505-19601524 | None:intergenic | 15.0% |
| !! | TATTATATTAGTAACCTATA+GGG | - | chr3.2:19604850-19604869 | None:intergenic | 15.0% |
| !! | TCTCAAAAACTAATATAAAA+TGG | - | chr3.2:19606014-19606033 | None:intergenic | 15.0% |
| !! | TTAAATTTATGAATTGTTTC+AGG | + | chr3.2:19601966-19601985 | MS.gene60455:intron | 15.0% |
| !!! | ATCAAACATATTTTCAAAAA+TGG | - | chr3.2:19604236-19604255 | None:intergenic | 15.0% |
| !!! | TTTAGGTTGATTTAATTTTA+GGG | + | chr3.2:19601680-19601699 | MS.gene60455:intron | 15.0% |
| !!! | TTTTAGAAAAAAATTACCAA+GGG | - | chr3.2:19605831-19605850 | None:intergenic | 15.0% |
| !! | AAATATAAAAGAAAGAGAGA+TGG | - | chr3.2:19603242-19603261 | None:intergenic | 20.0% |
| !! | AAATTCTGTTTGTAAATGTT+AGG | + | chr3.2:19601816-19601835 | MS.gene60455:intron | 20.0% |
| !! | AATCTCATCTAAAAAACTAA+AGG | + | chr3.2:19604634-19604653 | MS.gene60455:intron | 20.0% |
| !! | AATCTGAAAGGAAAAAAAAT+AGG | - | chr3.2:19603149-19603168 | None:intergenic | 20.0% |
| !! | ATATATAATACATGTGTGTA+CGG | - | chr3.2:19603839-19603858 | None:intergenic | 20.0% |
| !! | ATCACGAATATAAATCATAT+TGG | - | chr3.2:19604363-19604382 | None:intergenic | 20.0% |
| !! | ATTTCGGATTAAAATAATAC+TGG | + | chr3.2:19604902-19604921 | MS.gene60455:intron | 20.0% |
| !! | GAAAAATATTATTAAGTCAG+TGG | + | chr3.2:19605004-19605023 | MS.gene60455:intron | 20.0% |
| !! | GTAAATGTAAATATTGTCTT+TGG | + | chr3.2:19605976-19605995 | MS.gene60455:intron | 20.0% |
| !! | GTATTATATTAGTAACCTAT+AGG | - | chr3.2:19604851-19604870 | None:intergenic | 20.0% |
| !! | TAATATAAAATGGATATGCA+AGG | - | chr3.2:19606004-19606023 | None:intergenic | 20.0% |
| !! | TATTACTACTTGTCTTTAAT+TGG | + | chr3.2:19603957-19603976 | MS.gene60455:intron | 20.0% |
| !! | TATTTCTTATTCTTAGAAGT+AGG | + | chr3.2:19603508-19603527 | MS.gene60455:intron | 20.0% |
| !! | TGTATTTATATTGTTCTTAC+TGG | + | chr3.2:19602286-19602305 | MS.gene60455:intron | 20.0% |
| !!! | AAACATATTTTCAAAAATGG+AGG | - | chr3.2:19604233-19604252 | None:intergenic | 20.0% |
| !!! | AACATATTTTCAAAAATGGA+GGG | - | chr3.2:19604232-19604251 | None:intergenic | 20.0% |
| !!! | AATAAGTTCTTTTTCTGTTT+AGG | + | chr3.2:19601663-19601682 | MS.gene60455:intron | 20.0% |
| !!! | AGCACATATATTTTTTCAAA+GGG | + | chr3.2:19605228-19605247 | MS.gene60455:intron | 20.0% |
| !!! | AGTAATTGAAGATTATTTCT+TGG | + | chr3.2:19601896-19601915 | MS.gene60455:intron | 20.0% |
| !!! | AGTTTACATTTTTTTCTTAC+AGG | + | chr3.2:19603773-19603792 | MS.gene60455:intron | 20.0% |
| !!! | ATATTTCTAAACTATCTTGT+TGG | - | chr3.2:19605558-19605577 | None:intergenic | 20.0% |
| !!! | CAAGTTCTTTTACAAATTTT+AGG | - | chr3.2:19603724-19603743 | None:intergenic | 20.0% |
| !!! | CCGATATTTTATAGTATTTT+AGG | - | chr3.2:19605926-19605945 | None:intergenic | 20.0% |
| !!! | CTTTAATTTAGAATATGGAT+TGG | + | chr3.2:19603552-19603571 | MS.gene60455:intron | 20.0% |
| !!! | GTATTATTTTAATCCGAAAT+TGG | - | chr3.2:19604902-19604921 | None:intergenic | 20.0% |
| !!! | GTTTACATTTTTTTCTTACA+GGG | + | chr3.2:19603774-19603793 | MS.gene60455:intron | 20.0% |
| !!! | GTTTAGGTTGATTTAATTTT+AGG | + | chr3.2:19601679-19601698 | MS.gene60455:intron | 20.0% |
| !!! | GTTTTAGAAAAAAATTACCA+AGG | - | chr3.2:19605832-19605851 | None:intergenic | 20.0% |
| !!! | TCTTTCTTTTATATTTTCCT+TGG | + | chr3.2:19603246-19603265 | MS.gene60455:intron | 20.0% |
| !!! | TGTAATAGCATTCTTTATTT+TGG | + | chr3.2:19604978-19604997 | MS.gene60455:intron | 20.0% |
| !!! | TTACAAAACAAATTTTCATG+TGG | - | chr3.2:19602593-19602612 | None:intergenic | 20.0% |
| !!! | TTGTATGATTTTTGCAATTT+AGG | + | chr3.2:19601455-19601474 | MS.gene60455:intron | 20.0% |
| !!! | TTTACATTTTTTTCTTACAG+GGG | + | chr3.2:19603775-19603794 | MS.gene60455:intron | 20.0% |
| ! | AATTATTAAGCGTGAATGTT+TGG | + | chr3.2:19603104-19603123 | MS.gene60455:intron | 25.0% |
| ! | AATTTATATGGCTATATGGA+TGG | - | chr3.2:19603383-19603402 | None:intergenic | 25.0% |
| ! | ACCATCAAAATTATCTTCAA+AGG | + | chr3.2:19604718-19604737 | MS.gene60455:intron | 25.0% |
| ! | ACTAGTATTTAGTGGTTTAT+AGG | - | chr3.2:19604293-19604312 | None:intergenic | 25.0% |
| ! | AGAAATAGTTTCTTCAATCT+TGG | + | chr3.2:19604137-19604156 | MS.gene60455:intron | 25.0% |
| ! | AGGAAAAAGAAAATCATTTG+AGG | + | chr3.2:19602708-19602727 | MS.gene60455:CDS | 25.0% |
| ! | ATACAAAGTAGAAAACACAT+TGG | - | chr3.2:19602271-19602290 | None:intergenic | 25.0% |
| ! | ATACATTATTGGAATAATGC+TGG | + | chr3.2:19604867-19604886 | MS.gene60455:intron | 25.0% |
| ! | ATATTATTAAGTCAGTGGTT+AGG | + | chr3.2:19605009-19605028 | MS.gene60455:intron | 25.0% |
| ! | ATGCTGTGGAAATTAAATAT+GGG | - | chr3.2:19604060-19604079 | None:intergenic | 25.0% |
| ! | ATTAAAATAATACTGGTAGC+GGG | + | chr3.2:19604909-19604928 | MS.gene60455:intron | 25.0% |
| ! | ATTGATCAACTAGTATTTAG+TGG | - | chr3.2:19604301-19604320 | None:intergenic | 25.0% |
| ! | ATTGGCATTTATTGAAAGAA+AGG | - | chr3.2:19603628-19603647 | None:intergenic | 25.0% |
| ! | ATTTGCTCTTATTATCAGAA+AGG | + | chr3.2:19602329-19602348 | MS.gene60455:CDS | 25.0% |
| ! | CAAATCAATGATTAGGATTA+AGG | + | chr3.2:19604533-19604552 | MS.gene60455:intron | 25.0% |
| ! | CAAATTTCAACATTCTGTAT+TGG | - | chr3.2:19603646-19603665 | None:intergenic | 25.0% |
| ! | GATCTATAGATCTAGTAAAA+TGG | - | chr3.2:19604032-19604051 | None:intergenic | 25.0% |
| ! | GATTAAAATAATACTGGTAG+CGG | + | chr3.2:19604908-19604927 | MS.gene60455:intron | 25.0% |
| ! | GGATAATTTATATGGCTATA+TGG | - | chr3.2:19603387-19603406 | None:intergenic | 25.0% |
| ! | TATAGTCAACCAAAATTTGT+AGG | + | chr3.2:19604819-19604838 | MS.gene60455:intron | 25.0% |
| ! | TGACAAAATATGATAGTTTG+CGG | - | chr3.2:19602973-19602992 | None:intergenic | 25.0% |
| ! | TTAATTAAAAGGGGAAAACT+AGG | + | chr3.2:19605867-19605886 | MS.gene60455:intron | 25.0% |
| ! | TTTGCTCTTATTATCAGAAA+GGG | + | chr3.2:19602330-19602349 | MS.gene60455:CDS | 25.0% |
| !! | AGAATTTTATTCCATCATGA+GGG | + | chr3.2:19606205-19606224 | MS.gene60455:CDS | 25.0% |
| !! | AGATTGAAGAAACTATTTCT+AGG | - | chr3.2:19604137-19604156 | None:intergenic | 25.0% |
| !! | CTTAATCCTAATCATTGATT+TGG | - | chr3.2:19604535-19604554 | None:intergenic | 25.0% |
| !! | GGAAATTATTGATAACTACA+AGG | + | chr3.2:19603033-19603052 | MS.gene60455:CDS | 25.0% |
| !! | TACAAAGTTATGATTTTGTC+AGG | - | chr3.2:19605718-19605737 | None:intergenic | 25.0% |
| !! | TCTTTTTCCTTTTTATCAGT+AGG | - | chr3.2:19602698-19602717 | None:intergenic | 25.0% |
| !! | TGTTTATTACGTAGTGTTTT+TGG | + | chr3.2:19605512-19605531 | MS.gene60455:intron | 25.0% |
| !! | TTGCAATTTAGGTTTCAAAA+GGG | + | chr3.2:19601466-19601485 | MS.gene60455:intron | 25.0% |
| !! | TTTGCAATTTAGGTTTCAAA+AGG | + | chr3.2:19601465-19601484 | MS.gene60455:intron | 25.0% |
| !!! | ACAAATTTTGGTTGACTATA+GGG | - | chr3.2:19604819-19604838 | None:intergenic | 25.0% |
| !!! | AGAGTTTAATGTTTTTCGAA+TGG | + | chr3.2:19606430-19606449 | MS.gene60455:CDS | 25.0% |
| !!! | GAGCACATATATTTTTTCAA+AGG | + | chr3.2:19605227-19605246 | MS.gene60455:intron | 25.0% |
| !!! | GATAATTTTGATGGTTTCTT+TGG | - | chr3.2:19604713-19604732 | None:intergenic | 25.0% |
| !!! | GATTGTTTTAAGCTATTTTC+TGG | + | chr3.2:19601577-19601596 | MS.gene60455:intron | 25.0% |
| !!! | TACAAATTTTGGTTGACTAT+AGG | - | chr3.2:19604820-19604839 | None:intergenic | 25.0% |
| !!! | TCCTTTGAAGATAATTTTGA+TGG | - | chr3.2:19604722-19604741 | None:intergenic | 25.0% |
| AAATGGAAATTGTCCATTTG+GGG | + | chr3.2:19603196-19603215 | MS.gene60455:CDS | 30.0% | |
| AAATTAAAGCCCCCATAAAA+GGG | - | chr3.2:19603541-19603560 | None:intergenic | 30.0% | |
| AACAACATCTACAAGGATTT+GGG | - | chr3.2:19603416-19603435 | None:intergenic | 30.0% | |
| AGAACTAATCCAACAAAGAA+AGG | - | chr3.2:19603354-19603373 | None:intergenic | 30.0% | |
| AGCAATTGTTAATCTGAATG+TGG | - | chr3.2:19605166-19605185 | None:intergenic | 30.0% | |
| ATAAGTCAACAACATCTACA+AGG | - | chr3.2:19603423-19603442 | None:intergenic | 30.0% | |
| ATAGTTTCTTCAATCTTGGT+TGG | + | chr3.2:19604141-19604160 | MS.gene60455:intron | 30.0% | |
| ATGATAGAATAGTGTGTAAG+TGG | - | chr3.2:19604612-19604631 | None:intergenic | 30.0% | |
| ATTCAAAAGCTCAAACAGAT+TGG | - | chr3.2:19604113-19604132 | None:intergenic | 30.0% | |
| CAACAAAGAAAGGAAAATCA+TGG | - | chr3.2:19603344-19603363 | None:intergenic | 30.0% | |
| CAATGTCCAAATCAATGATT+AGG | + | chr3.2:19604526-19604545 | MS.gene60455:intron | 30.0% | |
| CAATTCCATGAAAATCATCA+GGG | - | chr3.2:19606499-19606518 | None:intergenic | 30.0% | |
| CACTACGTAATAAACACAAT+AGG | - | chr3.2:19605508-19605527 | None:intergenic | 30.0% | |
| GAAAAACGATCGAAGAAAAA+AGG | - | chr3.2:19601386-19601405 | None:intergenic | 30.0% | |
| GAAATGGAAATTGTCCATTT+GGG | + | chr3.2:19603195-19603214 | MS.gene60455:CDS | 30.0% | |
| GATGCTGTGGAAATTAAATA+TGG | - | chr3.2:19604061-19604080 | None:intergenic | 30.0% | |
| GTTGATCAATAGAGAGAAAA+CGG | + | chr3.2:19604311-19604330 | MS.gene60455:intron | 30.0% | |
| TAAATTAAAGCCCCCATAAA+AGG | - | chr3.2:19603542-19603561 | None:intergenic | 30.0% | |
| TACTACAAAGGAAGAAAAAC+AGG | + | chr3.2:19603012-19603031 | MS.gene60455:CDS | 30.0% | |
| TCAACCAAAATTTGTAGGTA+TGG | + | chr3.2:19604824-19604843 | MS.gene60455:intron | 30.0% | |
| TCAATTCCATGAAAATCATC+AGG | - | chr3.2:19606500-19606519 | None:intergenic | 30.0% | |
| TGCTGTGGAAATTAAATATG+GGG | - | chr3.2:19604059-19604078 | None:intergenic | 30.0% | |
| TGGAAACAAGTACTATCATA+TGG | + | chr3.2:19605257-19605276 | MS.gene60455:intron | 30.0% | |
| TTACTACACATTGGAATACA+TGG | - | chr3.2:19604453-19604472 | None:intergenic | 30.0% | |
| TTAGGTTATGGTAGTTTCTA+GGG | + | chr3.2:19605027-19605046 | MS.gene60455:intron | 30.0% | |
| TTAGTGGTTTATAGGAGTAA+TGG | - | chr3.2:19604285-19604304 | None:intergenic | 30.0% | |
| TTCAAAAGCTCAAACAGATT+GGG | - | chr3.2:19604112-19604131 | None:intergenic | 30.0% | |
| TTGATCAATAGAGAGAAAAC+GGG | + | chr3.2:19604312-19604331 | MS.gene60455:intron | 30.0% | |
| TTGCAATCAATCAATCTGAA+AGG | - | chr3.2:19603161-19603180 | None:intergenic | 30.0% | |
| ! | AAAGTTATGATTTTGTCAGG+TGG | - | chr3.2:19605715-19605734 | None:intergenic | 30.0% |
| ! | ACTTTTGAACATAGACACTA+AGG | - | chr3.2:19605893-19605912 | None:intergenic | 30.0% |
| ! | CATGATTTTCCTTTCTTTGT+TGG | + | chr3.2:19603342-19603361 | MS.gene60455:intron | 30.0% |
| ! | GAGAATTTTATTCCATCATG+AGG | + | chr3.2:19606204-19606223 | MS.gene60455:CDS | 30.0% |
| ! | TAGGTTTCTTTCCCTTTTAT+GGG | + | chr3.2:19603527-19603546 | MS.gene60455:intron | 30.0% |
| ! | TCATATTTTGTCATTCCAAG+TGG | + | chr3.2:19602980-19602999 | MS.gene60455:CDS | 30.0% |
| ! | TGCAATTTAGGTTTCAAAAG+GGG | + | chr3.2:19601467-19601486 | MS.gene60455:intron | 30.0% |
| ! | TGGTATTTGGTTTACTACAA+AGG | + | chr3.2:19603000-19603019 | MS.gene60455:CDS | 30.0% |
| ! | TTGATGGTTTCTTTGGATTT+GGG | - | chr3.2:19604706-19604725 | None:intergenic | 30.0% |
| ! | TTTGATGGTTTCTTTGGATT+TGG | - | chr3.2:19604707-19604726 | None:intergenic | 30.0% |
| ! | TTTTCATGGAATTGATCCTA+TGG | + | chr3.2:19606505-19606524 | MS.gene60455:CDS | 30.0% |
| !!! | AAACATTTTGACTCTGGAAA+TGG | + | chr3.2:19603179-19603198 | MS.gene60455:CDS | 30.0% |
| !!! | AAGGAGTTTTAAGAAGTTCA+AGG | - | chr3.2:19605059-19605078 | None:intergenic | 30.0% |
| !!! | ATTTTTTCAAAGGGTGAGTA+TGG | + | chr3.2:19605237-19605256 | MS.gene60455:intron | 30.0% |
| !!! | ATTTTTTTCTTACAGGGGAT+GGG | + | chr3.2:19603780-19603799 | MS.gene60455:intron | 30.0% |
| !!! | ATTTTTTTGTCTCGTGTAGT+AGG | + | chr3.2:19603890-19603909 | MS.gene60455:intron | 30.0% |
| AACAGGAAAAAGACCAAAGA+GGG | + | chr3.2:19605327-19605346 | MS.gene60455:intron | 35.0% | |
| AAGTATCAACAACAGTGTAG+GGG | - | chr3.2:19605608-19605627 | None:intergenic | 35.0% | |
| AATTCTTGCAGCATACACAA+CGG | - | chr3.2:19603088-19603107 | None:intergenic | 35.0% | |
| ACAACATCTACAAGGATTTG+GGG | - | chr3.2:19603415-19603434 | None:intergenic | 35.0% | |
| ACAAGTATCAACAACAGTGT+AGG | - | chr3.2:19605610-19605629 | None:intergenic | 35.0% | |
| ACATGTCATGCATATCGAAA+TGG | - | chr3.2:19606151-19606170 | None:intergenic | 35.0% | |
| AGAAGAAGATGAAGATTACG+AGG | + | chr3.2:19606574-19606593 | MS.gene60455:CDS | 35.0% | |
| AGATGAAATAAGAGATGCTG+TGG | - | chr3.2:19604074-19604093 | None:intergenic | 35.0% | |
| ATACATGGAGCATAGAAAGT+AGG | - | chr3.2:19604438-19604457 | None:intergenic | 35.0% | |
| ATGAAGTGAAGACAATAGGA+AGG | - | chr3.2:19605301-19605320 | None:intergenic | 35.0% | |
| ATGATAATCAAGCTTGACCA+AGG | - | chr3.2:19603266-19603285 | None:intergenic | 35.0% | |
| CAACAACATCTACAAGGATT+TGG | - | chr3.2:19603417-19603436 | None:intergenic | 35.0% | |
| CAAGTATCAACAACAGTGTA+GGG | - | chr3.2:19605609-19605628 | None:intergenic | 35.0% | |
| CGCTAAAGTAGCATCAAATT+GGG | + | chr3.2:19602457-19602476 | MS.gene60455:CDS | 35.0% | |
| GAAAGTAGGGAATGTAATTG+AGG | - | chr3.2:19604424-19604443 | None:intergenic | 35.0% | |
| GAATAGTGTGTAAGTGGTAA+AGG | - | chr3.2:19604606-19604625 | None:intergenic | 35.0% | |
| GATAATGCCATCATCTCAAA+TGG | - | chr3.2:19606257-19606276 | None:intergenic | 35.0% | |
| GATGTATTCGTTTGACCAAA+TGG | - | chr3.2:19605135-19605154 | None:intergenic | 35.0% | |
| GATTATTTAATCCAGATGCG+TGG | - | chr3.2:19603455-19603474 | None:intergenic | 35.0% | |
| GGAAATGGAAATTGTCCATT+TGG | + | chr3.2:19603194-19603213 | MS.gene60455:CDS | 35.0% | |
| GGGAGAACGGATAATTTATA+TGG | - | chr3.2:19603395-19603414 | None:intergenic | 35.0% | |
| GTAAAATGGTGAATGTGACA+AGG | - | chr3.2:19604018-19604037 | None:intergenic | 35.0% | |
| GTAGTAAACCAAATACCACT+TGG | - | chr3.2:19602998-19603017 | None:intergenic | 35.0% | |
| GTATTCCAATGTGTAGTAAC+TGG | + | chr3.2:19604454-19604473 | MS.gene60455:intron | 35.0% | |
| GTGAATATCTTTCACCTCAT+AGG | + | chr3.2:19603668-19603687 | MS.gene60455:intron | 35.0% | |
| GTTAGGTTATGGTAGTTTCT+AGG | + | chr3.2:19605026-19605045 | MS.gene60455:intron | 35.0% | |
| TACATGGAGCATAGAAAGTA+GGG | - | chr3.2:19604437-19604456 | None:intergenic | 35.0% | |
| TATCACTGTTGTCAATGTGT+CGG | + | chr3.2:19602201-19602220 | MS.gene60455:intron | 35.0% | |
| TATTGGAATAATGCTGGTAG+TGG | + | chr3.2:19604873-19604892 | MS.gene60455:intron | 35.0% | |
| TCTGATGAGAAAAATCGCAT+TGG | - | chr3.2:19602033-19602052 | None:intergenic | 35.0% | |
| TGAAACTACTTGGAAGATCT+TGG | - | chr3.2:19603994-19604013 | None:intergenic | 35.0% | |
| TGAAGTGAAGACAATAGGAA+GGG | - | chr3.2:19605300-19605319 | None:intergenic | 35.0% | |
| TGTCATGAAGTGAAGACAAT+AGG | - | chr3.2:19605305-19605324 | None:intergenic | 35.0% | |
| TTAAGTCAGTGGTTAGGTTA+TGG | + | chr3.2:19605015-19605034 | MS.gene60455:intron | 35.0% | |
| TTCTTCCAGTTACTACACAT+TGG | - | chr3.2:19604462-19604481 | None:intergenic | 35.0% | |
| TTGGCTGAAAATGATACTAG+AGG | + | chr3.2:19605395-19605414 | MS.gene60455:intron | 35.0% | |
| TTGTCATTCCAAGTGGTATT+TGG | + | chr3.2:19602987-19603006 | MS.gene60455:CDS | 35.0% | |
| TTTCGATATGCATGACATGT+TGG | + | chr3.2:19606151-19606170 | MS.gene60455:CDS | 35.0% | |
| TTTGAGGACTTGTGACAAAA+AGG | + | chr3.2:19602724-19602743 | MS.gene60455:CDS | 35.0% | |
| ! | AATGATGATGCATTCTCATG+TGG | + | chr3.2:19606544-19606563 | MS.gene60455:CDS | 35.0% |
| ! | AATGGATCCATTTGAGATGA+TGG | + | chr3.2:19606247-19606266 | MS.gene60455:CDS | 35.0% |
| ! | AGGTTTCTTTCCCTTTTATG+GGG | + | chr3.2:19603528-19603547 | MS.gene60455:intron | 35.0% |
| ! | CCATACCTGCAAAATTTTGT+GGG | - | chr3.2:19604796-19604815 | None:intergenic | 35.0% |
| ! | CGATTTTTCTCATCAGAGAA+AGG | + | chr3.2:19602036-19602055 | MS.gene60455:CDS | 35.0% |
| ! | GGGGGCTTTAATTTAGAATA+TGG | + | chr3.2:19603547-19603566 | MS.gene60455:intron | 35.0% |
| ! | GTAGGTTTCTTTCCCTTTTA+TGG | + | chr3.2:19603526-19603545 | MS.gene60455:intron | 35.0% |
| ! | GTGAATGATTGTTGTTCAGT+TGG | - | chr3.2:19603817-19603836 | None:intergenic | 35.0% |
| ! | TAAGCTTTTACCCACCAAAT+GGG | + | chr3.2:19604743-19604762 | MS.gene60455:intron | 35.0% |
| ! | TGGTTTATAGGAGTAATGGA+CGG | - | chr3.2:19604281-19604300 | None:intergenic | 35.0% |
| ! | TTAAGCTTTTACCCACCAAA+TGG | + | chr3.2:19604742-19604761 | MS.gene60455:intron | 35.0% |
| ! | TTTTGTGATCCATGAGTTGT+TGG | + | chr3.2:19605372-19605391 | MS.gene60455:intron | 35.0% |
| !! | CAAAAAGGAAAAGTACCTTC+TGG | + | chr3.2:19602739-19602758 | MS.gene60455:CDS | 35.0% |
| !! | GACACACTTGTTTTTCCATT+TGG | + | chr3.2:19605117-19605136 | MS.gene60455:intron | 35.0% |
| !! | GGTCTACTAGACTTGTTAAT+GGG | + | chr3.2:19604764-19604783 | MS.gene60455:intron | 35.0% |
| !! | GTCTACTAGACTTGTTAATG+GGG | + | chr3.2:19604765-19604784 | MS.gene60455:intron | 35.0% |
| !!! | ACGTAGTGTTTTTGGTGATA+GGG | + | chr3.2:19605520-19605539 | MS.gene60455:intron | 35.0% |
| !!! | AGGGACTCAGATTTTTTTGA+GGG | + | chr3.2:19606224-19606243 | MS.gene60455:CDS | 35.0% |
| !!! | CATTTTTTTCTTACAGGGGA+TGG | + | chr3.2:19603779-19603798 | MS.gene60455:intron | 35.0% |
| !!! | CTCAGATTTTTTTGAGGGAA+TGG | + | chr3.2:19606229-19606248 | MS.gene60455:CDS | 35.0% |
| !!! | GATTGCAAACATTTTGACTC+TGG | + | chr3.2:19603173-19603192 | MS.gene60455:CDS | 35.0% |
| !!! | GTTTCTGGGATAGATGATTT+TGG | + | chr3.2:19606473-19606492 | MS.gene60455:CDS | 35.0% |
| !!! | TACGTAGTGTTTTTGGTGAT+AGG | + | chr3.2:19605519-19605538 | MS.gene60455:intron | 35.0% |
| AAAATCTGAGTCCCTCATGA+TGG | - | chr3.2:19606219-19606238 | None:intergenic | 40.0% | |
| AAACTTACATTCCGATGGCT+TGG | - | chr3.2:19602825-19602844 | None:intergenic | 40.0% | |
| AACCCAAACTTACATTCCGA+TGG | - | chr3.2:19602830-19602849 | None:intergenic | 40.0% | |
| AACTTACATTCCGATGGCTT+GGG | - | chr3.2:19602824-19602843 | None:intergenic | 40.0% | |
| AAGATGATGCTTGAGAAGCT+CGG | - | chr3.2:19602394-19602413 | None:intergenic | 40.0% | |
| AAGCCATCGGAATGTAAGTT+TGG | + | chr3.2:19602824-19602843 | MS.gene60455:CDS | 40.0% | |
| AATAGGAAGGGTCTGGATAT+AGG | - | chr3.2:19605288-19605307 | None:intergenic | 40.0% | |
| ACAAGTCTAGTAGACCCATT+TGG | - | chr3.2:19604760-19604779 | None:intergenic | 40.0% | |
| ACAGGAAAAAGACCAAAGAG+GGG | + | chr3.2:19605328-19605347 | MS.gene60455:intron | 40.0% | |
| ACTCATTCTCAGATCACTCA+TGG | - | chr3.2:19605440-19605459 | None:intergenic | 40.0% | |
| AGCATCATCTTCAGCATCTA+TGG | + | chr3.2:19602403-19602422 | MS.gene60455:CDS | 40.0% | |
| AGCCATCGGAATGTAAGTTT+GGG | + | chr3.2:19602825-19602844 | MS.gene60455:CDS | 40.0% | |
| AGGATAATGCTAGCAACTAG+CGG | - | chr3.2:19604586-19604605 | None:intergenic | 40.0% | |
| ATAACTACAAGGCAAACTGC+AGG | + | chr3.2:19603044-19603063 | MS.gene60455:CDS | 40.0% | |
| ATCATCTATCCCAGAAACCA+TGG | - | chr3.2:19606471-19606490 | None:intergenic | 40.0% | |
| ATTCAGACGATGAGGATGAT+GGG | + | chr3.2:19606321-19606340 | MS.gene60455:CDS | 40.0% | |
| ATTTGTAGGTATGGCCCTAT+AGG | + | chr3.2:19604833-19604852 | MS.gene60455:intron | 40.0% | |
| CAATGCGTCATAACTCAAAG+AGG | - | chr3.2:19604663-19604682 | None:intergenic | 40.0% | |
| CCTGCATCCTACTGATAAAA+AGG | + | chr3.2:19602688-19602707 | MS.gene60455:CDS | 40.0% | |
| CTCATAGGAAGATGATGTAG+AGG | + | chr3.2:19603683-19603702 | MS.gene60455:intron | 40.0% | |
| CTCTACATCATCTTCCTATG+AGG | - | chr3.2:19603685-19603704 | None:intergenic | 40.0% | |
| CTTCACTTCATGACATGAAC+AGG | + | chr3.2:19605310-19605329 | MS.gene60455:intron | 40.0% | |
| GAACAGGAAAAAGACCAAAG+AGG | + | chr3.2:19605326-19605345 | MS.gene60455:intron | 40.0% | |
| GAAGGAACCTTTGTAACCTT+CGG | - | chr3.2:19602485-19602504 | None:intergenic | 40.0% | |
| GAATCAAAAGGACCCAAACA+AGG | - | chr3.2:19606305-19606324 | None:intergenic | 40.0% | |
| GATATCAAAGCTGCATCCAT+AGG | - | chr3.2:19606524-19606543 | None:intergenic | 40.0% | |
| GCGCTAAAGTAGCATCAAAT+TGG | + | chr3.2:19602456-19602475 | MS.gene60455:CDS | 40.0% | |
| GTGACAAGGATGAAACTACT+TGG | - | chr3.2:19604004-19604023 | None:intergenic | 40.0% | |
| GTTTGTCATGTATCCGCAAT+TGG | + | chr3.2:19602876-19602895 | MS.gene60455:CDS | 40.0% | |
| TCAAATTGCTGCTATGCAAG+AGG | + | chr3.2:19606355-19606374 | MS.gene60455:CDS | 40.0% | |
| TCCTCATCGTCTGAATCAAA+AGG | - | chr3.2:19606317-19606336 | None:intergenic | 40.0% | |
| TGAGTTATGACGCATTGCAT+TGG | + | chr3.2:19604666-19604685 | MS.gene60455:intron | 40.0% | |
| TGTTTAACTGCCCTGTGTTT+CGG | - | chr3.2:19605785-19605804 | None:intergenic | 40.0% | |
| ! | ACACTTGTAGCTTTACACGT+TGG | - | chr3.2:19605194-19605213 | None:intergenic | 40.0% |
| ! | AGGGCCATACCTACAAATTT+TGG | - | chr3.2:19604831-19604850 | None:intergenic | 40.0% |
| ! | AGTACTGGATTCACCAACAT+CGG | - | chr3.2:19602558-19602577 | None:intergenic | 40.0% |
| ! | AGTCACCCACAAAATTTTGC+AGG | + | chr3.2:19604788-19604807 | MS.gene60455:intron | 40.0% |
| ! | ATGATAGTTTGCGGCAAACA+GGG | - | chr3.2:19602964-19602983 | None:intergenic | 40.0% |
| ! | CAGAAAGCATGATCACATTC+TGG | - | chr3.2:19602857-19602876 | None:intergenic | 40.0% |
| ! | CCCACAAAATTTTGCAGGTA+TGG | + | chr3.2:19604793-19604812 | MS.gene60455:intron | 40.0% |
| ! | CCTTTTTATCAGTAGGATGC+AGG | - | chr3.2:19602691-19602710 | None:intergenic | 40.0% |
| ! | GCCATACCTGCAAAATTTTG+TGG | - | chr3.2:19604797-19604816 | None:intergenic | 40.0% |
| ! | GGTTTCTTTCCCTTTTATGG+GGG | + | chr3.2:19603529-19603548 | MS.gene60455:intron | 40.0% |
| ! | GTAGTAGGCAAGTGGTATTT+TGG | + | chr3.2:19603905-19603924 | MS.gene60455:intron | 40.0% |
| ! | GTTATGATTTTGTCAGGTGG+AGG | - | chr3.2:19605712-19605731 | None:intergenic | 40.0% |
| ! | TATGATAGTTTGCGGCAAAC+AGG | - | chr3.2:19602965-19602984 | None:intergenic | 40.0% |
| ! | TTTGGCCCTGATGATTTTCA+TGG | + | chr3.2:19606491-19606510 | MS.gene60455:CDS | 40.0% |
| !! | AACACCTCATGGACTAGATA+AGG | + | chr3.2:19605801-19605820 | MS.gene60455:intron | 40.0% |
| !! | CTGGTAGTGGAAACCAATTT+CGG | + | chr3.2:19604886-19604905 | MS.gene60455:intron | 40.0% |
| !! | GCAAGTGGTATTTTGGACTT+TGG | + | chr3.2:19603912-19603931 | MS.gene60455:intron | 40.0% |
| !! | GGGTCTACTAGACTTGTTAA+TGG | + | chr3.2:19604763-19604782 | MS.gene60455:intron | 40.0% |
| !! | GGTTGATGAGATTTACCTGT+TGG | - | chr3.2:19601365-19601384 | None:intergenic | 40.0% |
| !! | GTTTCGGGTGGACTAAATAA+TGG | - | chr3.2:19605769-19605788 | None:intergenic | 40.0% |
| !! | GTTTGCAAGTTTTATGCTCG+AGG | + | chr3.2:19601989-19602008 | MS.gene60455:CDS | 40.0% |
| !! | TAACACTGATTTCCCCTCTT+TGG | - | chr3.2:19605343-19605362 | None:intergenic | 40.0% |
| !! | TCCTTTTGATTCAGACGATG+AGG | + | chr3.2:19606313-19606332 | MS.gene60455:CDS | 40.0% |
| !! | TTATAGGAGTAATGGACGGA+GGG | - | chr3.2:19604277-19604296 | None:intergenic | 40.0% |
| !! | TTTATAGGAGTAATGGACGG+AGG | - | chr3.2:19604278-19604297 | None:intergenic | 40.0% |
| !!! | AAATGGTTTTGTCTGCGTTG+AGG | - | chr3.2:19606134-19606153 | None:intergenic | 40.0% |
| !!! | GAGGGACTCAGATTTTTTTG+AGG | + | chr3.2:19606223-19606242 | MS.gene60455:CDS | 40.0% |
| ACACTGACACAAACAGACAC+CGG | - | chr3.2:19602241-19602260 | None:intergenic | 45.0% | |
| AGCATCAAATTGGGTTCCGA+AGG | + | chr3.2:19602466-19602485 | MS.gene60455:CDS | 45.0% | |
| AGTCTAGTAGACCCATTTGG+TGG | - | chr3.2:19604757-19604776 | None:intergenic | 45.0% | |
| ATCAACAACAGTGTAGGGGA+GGG | - | chr3.2:19605604-19605623 | None:intergenic | 45.0% | |
| ATTTAGTCCACCCGAAACAC+AGG | + | chr3.2:19605771-19605790 | MS.gene60455:intron | 45.0% | |
| CAACTAGCGGCTCTGTATTA+GGG | - | chr3.2:19604573-19604592 | None:intergenic | 45.0% | |
| CATGACATGTTGGATGTGCT+CGG | + | chr3.2:19606161-19606180 | MS.gene60455:CDS | 45.0% | |
| CCAACCTCTGCAATGGAAAT+CGG | + | chr3.2:19602911-19602930 | MS.gene60455:CDS | 45.0% | |
| CCTTTCAAAACCCAAGCCAT+CGG | + | chr3.2:19602811-19602830 | MS.gene60455:CDS | 45.0% | |
| CGATTTCCATTGCAGAGGTT+GGG | - | chr3.2:19602913-19602932 | None:intergenic | 45.0% | |
| CTACAAGGATTTGGGGAGAA+CGG | - | chr3.2:19603408-19603427 | None:intergenic | 45.0% | |
| GATACTAGAGGCTAGAGCTA+TGG | + | chr3.2:19605407-19605426 | MS.gene60455:intron | 45.0% | |
| GATGGCATTATCAGATTCGC+TGG | + | chr3.2:19606265-19606284 | MS.gene60455:CDS | 45.0% | |
| GATTCAGACGATGAGGATGA+TGG | + | chr3.2:19606320-19606339 | MS.gene60455:CDS | 45.0% | |
| GATTTCCATTGCAGAGGTTG+GGG | - | chr3.2:19602912-19602931 | None:intergenic | 45.0% | |
| GGACAAGTTGCTAAAGCTTG+TGG | - | chr3.2:19603607-19603626 | None:intergenic | 45.0% | |
| GTCTAGTAGACCCATTTGGT+GGG | - | chr3.2:19604756-19604775 | None:intergenic | 45.0% | |
| GTGATCCATGAGTTGTTGGT+TGG | + | chr3.2:19605376-19605395 | MS.gene60455:intron | 45.0% | |
| GTTTAACTGCCCTGTGTTTC+GGG | - | chr3.2:19605784-19605803 | None:intergenic | 45.0% | |
| TAGAAACAGCTAGCCCCAAA+TGG | - | chr3.2:19603212-19603231 | None:intergenic | 45.0% | |
| TATCAACAACAGTGTAGGGG+AGG | - | chr3.2:19605605-19605624 | None:intergenic | 45.0% | |
| TCATTCCCAAGTAGCTCAGT+TGG | - | chr3.2:19605099-19605118 | None:intergenic | 45.0% | |
| TGAAGACAATAGGAAGGGTC+TGG | - | chr3.2:19605295-19605314 | None:intergenic | 45.0% | |
| TGCAACATACACTAGCCAGT+AGG | - | chr3.2:19604169-19604188 | None:intergenic | 45.0% | |
| TGCTCCTTATCTAGTCCATG+AGG | - | chr3.2:19605808-19605827 | None:intergenic | 45.0% | |
| TTCAGCCAACCAACAACTCA+TGG | - | chr3.2:19605384-19605403 | None:intergenic | 45.0% | |
| TTGGAAGATCTTGGAGACGA+TGG | - | chr3.2:19603985-19604004 | None:intergenic | 45.0% | |
| TTGGGTTCCGAAGGTTACAA+AGG | + | chr3.2:19602475-19602494 | MS.gene60455:CDS | 45.0% | |
| TTTAGTCCACCCGAAACACA+GGG | + | chr3.2:19605772-19605791 | MS.gene60455:intron | 45.0% | |
| TTTCAGCATACAGTGAAGCC+TGG | + | chr3.2:19606077-19606096 | MS.gene60455:intron | 45.0% | |
| ! | ATGATTTTGTCAGGTGGAGG+TGG | - | chr3.2:19605709-19605728 | None:intergenic | 45.0% |
| ! | CAGAAAGGGTCTTGTGCTTA+TGG | + | chr3.2:19602344-19602363 | MS.gene60455:CDS | 45.0% |
| ! | GATGTTGGTGAATCCAGTAC+TGG | + | chr3.2:19602557-19602576 | MS.gene60455:CDS | 45.0% |
| ! | GGTCTTGTGCTTATGGTAGT+CGG | + | chr3.2:19602351-19602370 | MS.gene60455:CDS | 45.0% |
| ! | GGTGAGGTTGATCTATCAAG+TGG | + | chr3.2:19606182-19606201 | MS.gene60455:CDS | 45.0% |
| !! | ACTACCGATTTCCATTGCAG+AGG | - | chr3.2:19602918-19602937 | None:intergenic | 45.0% |
| !! | ATGGAAGGTGTCTGGAAACA+AGG | - | chr3.2:19605681-19605700 | None:intergenic | 45.0% |
| !! | TATAGGAGTAATGGACGGAG+GGG | - | chr3.2:19604276-19604295 | None:intergenic | 45.0% |
| !! | TGGAAGGTGTCTGGAAACAA+GGG | - | chr3.2:19605680-19605699 | None:intergenic | 45.0% |
| !!! | AGTGTTTTTGGTGATAGGGC+AGG | + | chr3.2:19605524-19605543 | MS.gene60455:intron | 45.0% |
| !!! | CGCTGTTTTTCAAAGCCAGA+AGG | - | chr3.2:19602757-19602776 | None:intergenic | 45.0% |
| !! | TATAAAAATTTAATTAAAAG+GGG | + | chr3.2:19605858-19605877 | MS.gene60455:intron | 5.0% |
| AACAAGGGTGGCTGTGTTCA+AGG | - | chr3.2:19605665-19605684 | None:intergenic | 50.0% | |
| ACAAGGGTGGCTGTGTTCAA+GGG | - | chr3.2:19605664-19605683 | None:intergenic | 50.0% | |
| AGGGCAGGTTCTCACTGTAT+TGG | - | chr3.2:19602945-19602964 | None:intergenic | 50.0% | |
| ATGCAAGAGGCCATGGTTTC+TGG | + | chr3.2:19606458-19606477 | MS.gene60455:CDS | 50.0% | |
| CAGGGCAGTTAAACACCTCA+TGG | + | chr3.2:19605790-19605809 | MS.gene60455:intron | 50.0% | |
| CATCAGGACTCTACCGATGT+TGG | + | chr3.2:19602542-19602561 | MS.gene60455:CDS | 50.0% | |
| CCGATTTCCATTGCAGAGGT+TGG | - | chr3.2:19602914-19602933 | None:intergenic | 50.0% | |
| CCTCATCGTCATCGTCATCA+GGG | - | chr3.2:19606409-19606428 | None:intergenic | 50.0% | |
| GACACAAACAGACACCGGAT+AGG | - | chr3.2:19602236-19602255 | None:intergenic | 50.0% | |
| GCAACTAGCGGCTCTGTATT+AGG | - | chr3.2:19604574-19604593 | None:intergenic | 50.0% | |
| GCATTATCAGATTCGCTGGC+TGG | + | chr3.2:19606269-19606288 | MS.gene60455:CDS | 50.0% | |
| GGCGGATGTTCTCGTATTCA+CGG | + | chr3.2:19602635-19602654 | MS.gene60455:CDS | 50.0% | |
| GGGTTTACAACGCAAGCATC+AGG | + | chr3.2:19602526-19602545 | MS.gene60455:CDS | 50.0% | |
| GTGAATACGAGAACATCCGC+CGG | - | chr3.2:19602636-19602655 | None:intergenic | 50.0% | |
| TCAACAACAGTGTAGGGGAG+GGG | - | chr3.2:19605603-19605622 | None:intergenic | 50.0% | |
| TCCCAAGTAGCTCAGTTGGT+GGG | - | chr3.2:19605095-19605114 | None:intergenic | 50.0% | |
| TCCTCATCGTCATCGTCATC+AGG | - | chr3.2:19606410-19606429 | None:intergenic | 50.0% | |
| TCGAATGGCTGCTATGCAAG+AGG | + | chr3.2:19606445-19606464 | MS.gene60455:CDS | 50.0% | |
| TGAAGCCTGGCTCATACACA+TGG | + | chr3.2:19606090-19606109 | MS.gene60455:CDS | 50.0% | |
| TGAATACGAGAACATCCGCC+GGG | - | chr3.2:19602635-19602654 | None:intergenic | 50.0% | |
| TGCAAGAGGCCATGGTTTCT+GGG | + | chr3.2:19606459-19606478 | MS.gene60455:CDS | 50.0% | |
| TGCTTGTTCAGCAGCTAGCT+AGG | + | chr3.2:19605473-19605492 | MS.gene60455:intron | 50.0% | |
| TGGTCTAGCACTACCAGTAC+TGG | - | chr3.2:19602573-19602592 | None:intergenic | 50.0% | |
| TGTCTCCATGTGTATGAGCC+AGG | - | chr3.2:19606098-19606117 | None:intergenic | 50.0% | |
| TGTCTCGTGTAGTAGGCAAG+TGG | + | chr3.2:19603897-19603916 | MS.gene60455:intron | 50.0% | |
| TTCAGATTCTGCTGTGCCTG+TGG | + | chr3.2:19602427-19602446 | MS.gene60455:CDS | 50.0% | |
| TTCCCAAGTAGCTCAGTTGG+TGG | - | chr3.2:19605096-19605115 | None:intergenic | 50.0% | |
| ! | AAGGTGTCTGGAAACAAGGG+TGG | - | chr3.2:19605677-19605696 | None:intergenic | 50.0% |
| ! | ATGACGCATTGCATTGGCGA+TGG | + | chr3.2:19604672-19604691 | MS.gene60455:intron | 50.0% |
| ! | ATTTTGTCAGGTGGAGGTGG+TGG | - | chr3.2:19605706-19605725 | None:intergenic | 50.0% |
| ! | CAATCTTGGTTGGTGCCTAC+TGG | + | chr3.2:19604151-19604170 | MS.gene60455:intron | 50.0% |
| ! | GCTCGAGGCGTTTGTTTGAA+AGG | + | chr3.2:19602004-19602023 | MS.gene60455:CDS | 50.0% |
| ! | GCTCTTGGGATGGATGCTTT+TGG | + | chr3.2:19606383-19606402 | MS.gene60455:CDS | 50.0% |
| ! | TAGCGGGTAAGAGTGGAAGT+AGG | + | chr3.2:19604925-19604944 | MS.gene60455:intron | 50.0% |
| ! | TTATCAGATTCGCTGGCTGG+CGG | + | chr3.2:19606272-19606291 | MS.gene60455:CDS | 50.0% |
| ! | TTTTGTCTGCGTTGAGGTGG+TGG | - | chr3.2:19606128-19606147 | None:intergenic | 50.0% |
| !! | ATACTGGTAGCGGGTAAGAG+TGG | + | chr3.2:19604918-19604937 | MS.gene60455:intron | 50.0% |
| !! | CGGGTGGACTAAATAATGGC+AGG | - | chr3.2:19605765-19605784 | None:intergenic | 50.0% |
| !! | GACTAGATAAGGAGCACCCT+TGG | + | chr3.2:19605812-19605831 | MS.gene60455:intron | 50.0% |
| !! | TAGCTCAGTTGGTGGGCTAA+GGG | - | chr3.2:19605088-19605107 | None:intergenic | 50.0% |
| !! | TGGGGCTAGCTGTTTCTACA+AGG | + | chr3.2:19603214-19603233 | MS.gene60455:CDS | 50.0% |
| !!! | CCGATGGCTTGGGTTTTGAA+AGG | - | chr3.2:19602814-19602833 | None:intergenic | 50.0% |
| !!! | TGGTTTTGTCTGCGTTGAGG+TGG | - | chr3.2:19606131-19606150 | None:intergenic | 50.0% |
| ACCTGACAAGCGTGGCGTAA+AGG | + | chr3.2:19602505-19602524 | MS.gene60455:CDS | 55.0% | |
| AGCATCCATCCCAAGAGCCA+TGG | - | chr3.2:19606381-19606400 | None:intergenic | 55.0% | |
| AGCCCACCAACTGAGCTACT+TGG | + | chr3.2:19605090-19605109 | MS.gene60455:intron | 55.0% | |
| ATGCAAGAGGCCATGGCTCT+TGG | + | chr3.2:19606368-19606387 | MS.gene60455:CDS | 55.0% | |
| CATACACATGGAGACACCGC+AGG | + | chr3.2:19606102-19606121 | MS.gene60455:CDS | 55.0% | |
| CCTGACAAGCGTGGCGTAAA+GGG | + | chr3.2:19602506-19602525 | MS.gene60455:CDS | 55.0% | |
| GAATACGAGAACATCCGCCG+GGG | - | chr3.2:19602634-19602653 | None:intergenic | 55.0% | |
| GAGTCAGTGTCGTGTCGTGT+CGG | - | chr3.2:19602146-19602165 | None:intergenic | 55.0% | |
| GCCCACCAACTGAGCTACTT+GGG | + | chr3.2:19605091-19605110 | MS.gene60455:intron | 55.0% | |
| GGGCACTACTACGCCAATTG+CGG | - | chr3.2:19602892-19602911 | None:intergenic | 55.0% | |
| GTTCCTTCACCTGACAAGCG+TGG | + | chr3.2:19602497-19602516 | MS.gene60455:CDS | 55.0% | |
| TAACTGCCCTGTGTTTCGGG+TGG | - | chr3.2:19605781-19605800 | None:intergenic | 55.0% | |
| TAGTGCCCCAACCTCTGCAA+TGG | + | chr3.2:19602904-19602923 | MS.gene60455:CDS | 55.0% | |
| TGCAAGAGGCCATGGCTCTT+GGG | + | chr3.2:19606369-19606388 | MS.gene60455:CDS | 55.0% | |
| TGCTGCTATGCAAGAGGCCA+TGG | + | chr3.2:19606361-19606380 | MS.gene60455:CDS | 55.0% | |
| TGGCGGTTCAGGTCCTTGTT+TGG | + | chr3.2:19606289-19606308 | MS.gene60455:CDS | 55.0% | |
| ! | CATGTTGGATGTGCTCGGTG+AGG | + | chr3.2:19606166-19606185 | MS.gene60455:CDS | 55.0% |
| ! | CCCTGATGACGATGACGATG+AGG | + | chr3.2:19606406-19606425 | MS.gene60455:CDS | 55.0% |
| ! | CGTGTCGTGTCGGTGATTAG+AGG | - | chr3.2:19602136-19602155 | None:intergenic | 55.0% |
| ! | GGCGGTTCAGGTCCTTGTTT+GGG | + | chr3.2:19606290-19606309 | MS.gene60455:CDS | 55.0% |
| ! | TAGTTTGCGGCAAACAGGGC+AGG | - | chr3.2:19602960-19602979 | None:intergenic | 55.0% |
| !! | AGTAATGGACGGAGGGGTGA+TGG | - | chr3.2:19604270-19604289 | None:intergenic | 55.0% |
| !! | GGTGGGCTAAGGGACATCAA+AGG | - | chr3.2:19605078-19605097 | None:intergenic | 55.0% |
| !! | GTAGCTCAGTTGGTGGGCTA+AGG | - | chr3.2:19605089-19605108 | None:intergenic | 55.0% |
| !! | GTCGGTGTCAGTGTCCTATC+CGG | + | chr3.2:19602219-19602238 | MS.gene60455:intron | 55.0% |
| !! | TGGTGGTGATGGAAGGTGTC+TGG | - | chr3.2:19605689-19605708 | None:intergenic | 55.0% |
| ACGCCACGCTTGTCAGGTGA+AGG | - | chr3.2:19602503-19602522 | None:intergenic | 60.0% | |
| ACTTTAGCGCTGCGAGCCAC+AGG | - | chr3.2:19602446-19602465 | None:intergenic | 60.0% | |
| AGAGGCCATGGCTCTTGGGA+TGG | + | chr3.2:19606373-19606392 | MS.gene60455:CDS | 60.0% | |
| AGGGGAGGGGCAAACAAGGT+TGG | - | chr3.2:19605590-19605609 | None:intergenic | 60.0% | |
| ATGCGCGCTAACCACGCATC+TGG | + | chr3.2:19603441-19603460 | MS.gene60455:intron | 60.0% | |
| CCCTTTACGCCACGCTTGTC+AGG | - | chr3.2:19602509-19602528 | None:intergenic | 60.0% | |
| GGCTGCTATGCAAGAGGCCA+TGG | + | chr3.2:19606451-19606470 | MS.gene60455:CDS | 60.0% | |
| GGGGAGGGGCAAACAAGGTT+GGG | - | chr3.2:19605589-19605608 | None:intergenic | 60.0% | |
| GTGTAGGGGAGGGGCAAACA+AGG | - | chr3.2:19605594-19605613 | None:intergenic | 60.0% | |
| TTTGCTGCTGCCAACTGCCC+CGG | + | chr3.2:19602614-19602633 | MS.gene60455:CDS | 60.0% | |
| ! | TCAGGTGGAGGTGGTGGTGA+TGG | - | chr3.2:19605700-19605719 | None:intergenic | 60.0% |
| !! | GTGGAGGTGGTGGTGATGGA+AGG | - | chr3.2:19605696-19605715 | None:intergenic | 60.0% |
| AGAACATCCGCCGGGGCAGT+TGG | - | chr3.2:19602627-19602646 | None:intergenic | 65.0% | |
| ! | GATTCGCTGGCTGGCGGTTC+AGG | + | chr3.2:19606278-19606297 | MS.gene60455:CDS | 65.0% |
| ! | TGCGTTGAGGTGGTGGCCTG+CGG | - | chr3.2:19606121-19606140 | None:intergenic | 65.0% |
| GCTGCTGCCAACTGCCCCGG+CGG | + | chr3.2:19602617-19602636 | MS.gene60455:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 19601358 | 19606628 | 19601358 | ID=MS.gene60455 |
| chr3.2 | mRNA | 19601358 | 19606628 | 19601358 | ID=MS.gene60455.t1;Parent=MS.gene60455 |
| chr3.2 | exon | 19601358 | 19601368 | 19601358 | ID=MS.gene60455.t1.exon1;Parent=MS.gene60455.t1 |
| chr3.2 | CDS | 19601358 | 19601368 | 19601358 | ID=cds.MS.gene60455.t1;Parent=MS.gene60455.t1 |
| chr3.2 | exon | 19601988 | 19602072 | 19601988 | ID=MS.gene60455.t1.exon2;Parent=MS.gene60455.t1 |
| chr3.2 | CDS | 19601988 | 19602072 | 19601988 | ID=cds.MS.gene60455.t1;Parent=MS.gene60455.t1 |
| chr3.2 | exon | 19602329 | 19603065 | 19602329 | ID=MS.gene60455.t1.exon3;Parent=MS.gene60455.t1 |
| chr3.2 | CDS | 19602329 | 19603065 | 19602329 | ID=cds.MS.gene60455.t1;Parent=MS.gene60455.t1 |
| chr3.2 | exon | 19603166 | 19603235 | 19603166 | ID=MS.gene60455.t1.exon4;Parent=MS.gene60455.t1 |
| chr3.2 | CDS | 19603166 | 19603235 | 19603166 | ID=cds.MS.gene60455.t1;Parent=MS.gene60455.t1 |
| chr3.2 | exon | 19606083 | 19606628 | 19606083 | ID=MS.gene60455.t1.exon5;Parent=MS.gene60455.t1 |
| chr3.2 | CDS | 19606083 | 19606628 | 19606083 | ID=cds.MS.gene60455.t1;Parent=MS.gene60455.t1 |
| Gene Sequence |
| Protein sequence |
