Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60697.t1 | AES62325.1 | 46.5 | 331 | 113 | 10 | 8 | 321 | 7 | 290 | 2.20E-61 | 246.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60697.t1 | Q2QMT5 | 23.2 | 302 | 176 | 9 | 36 | 302 | 30 | 310 | 1.3e-06 | 55.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60697.t1 | G7IBX1 | 46.5 | 331 | 113 | 10 | 8 | 321 | 7 | 290 | 1.6e-61 | 246.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene60697.t1 | TF | B3 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60697.t1 | MTR_1g098450 | 46.526 | 331 | 113 | 10 | 8 | 321 | 7 | 290 | 2.36e-82 | 252 |
MS.gene60697.t1 | MTR_6g043890 | 29.195 | 298 | 181 | 11 | 13 | 301 | 15 | 291 | 4.61e-22 | 95.1 |
MS.gene60697.t1 | MTR_7g050560 | 27.922 | 308 | 189 | 10 | 13 | 317 | 13 | 290 | 3.20e-19 | 87.0 |
MS.gene60697.t1 | MTR_5g044670 | 26.019 | 319 | 199 | 13 | 13 | 321 | 16 | 307 | 4.04e-19 | 86.7 |
MS.gene60697.t1 | MTR_4g119990 | 27.070 | 314 | 210 | 12 | 13 | 320 | 15 | 315 | 2.38e-18 | 85.1 |
MS.gene60697.t1 | MTR_7g050590 | 28.378 | 296 | 191 | 9 | 27 | 317 | 1 | 280 | 2.98e-18 | 84.0 |
MS.gene60697.t1 | MTR_3g098790 | 28.527 | 319 | 182 | 14 | 13 | 317 | 13 | 299 | 1.23e-17 | 82.4 |
MS.gene60697.t1 | MTR_1g108780 | 27.097 | 310 | 176 | 13 | 31 | 321 | 16 | 294 | 1.44e-17 | 83.2 |
MS.gene60697.t1 | MTR_8g103940 | 25.786 | 318 | 200 | 9 | 12 | 317 | 38 | 331 | 2.12e-17 | 83.2 |
MS.gene60697.t1 | MTR_1g035460 | 25.566 | 309 | 190 | 9 | 27 | 317 | 1 | 287 | 6.01e-15 | 75.5 |
MS.gene60697.t1 | MTR_7g050580 | 25.962 | 312 | 190 | 11 | 13 | 317 | 13 | 290 | 2.33e-14 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60697.t1 | AT3G18990 | 23.546 | 361 | 185 | 11 | 13 | 317 | 11 | 336 | 2.85e-16 | 79.0 |
MS.gene60697.t1 | AT3G18990 | 23.546 | 361 | 185 | 11 | 13 | 317 | 11 | 336 | 4.43e-16 | 78.6 |
Find 64 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGCATTGAGTCGTGAATTT+TGG | 0.100356 | 1.2:-70918700 | MS.gene60697:CDS |
TAAATTAATTAATAGGTAAA+AGG | 0.164286 | 1.2:-70918183 | MS.gene60697:intron |
CTCCTCCTAACAATGGATTT+TGG | 0.211812 | 1.2:-70917778 | MS.gene60697:CDS |
CTTGCCAGTTAGATCAAATA+TGG | 0.212339 | 1.2:+70918481 | None:intergenic |
GATCTAACTGGCAAGGAAAT+TGG | 0.214464 | 1.2:-70918473 | MS.gene60697:CDS |
GAATGAAAGTATTGTTATTC+TGG | 0.216903 | 1.2:+70918050 | None:intergenic |
TGGGGATCCCCTGGTGTTAT+AGG | 0.270367 | 1.2:+70918153 | None:intergenic |
CCTATAGGTCTTGTGCTTCC+TGG | 0.297366 | 1.2:-70918662 | MS.gene60697:CDS |
GTTTCCATATTTGATCTAAC+TGG | 0.319236 | 1.2:-70918485 | MS.gene60697:CDS |
GCGGACAATAAATTGAAAAT+AGG | 0.327390 | 1.2:-70917683 | MS.gene60697:CDS |
CCACAGTTTCATTAATAGTT+GGG | 0.355834 | 1.2:+70918134 | None:intergenic |
TGCTTCCTGGTAATTGTATA+TGG | 0.364093 | 1.2:-70918649 | MS.gene60697:CDS |
AGATGCCAAAATCCATTGTT+AGG | 0.365217 | 1.2:+70917773 | None:intergenic |
TCTACGTTTAATATCTTCTT+CGG | 0.367333 | 1.2:+70918108 | None:intergenic |
CTCATGTGATATTAAACAAT+TGG | 0.396587 | 1.2:-70918598 | MS.gene60697:CDS |
GATGATATTTCTAGCCCTAT+AGG | 0.399445 | 1.2:-70918677 | MS.gene60697:CDS |
ACCACAGTTTCATTAATAGT+TGG | 0.399671 | 1.2:+70918133 | None:intergenic |
GGGGATCCCCTGGTGTTATA+GGG | 0.400896 | 1.2:+70918154 | None:intergenic |
CCAGGAAGCACAAGACCTAT+AGG | 0.409533 | 1.2:+70918662 | None:intergenic |
AAATTAATTAATAGGTAAAA+GGG | 0.423358 | 1.2:-70918182 | MS.gene60697:intron |
TCATGAGGCTTTGTCATTTG+AGG | 0.430259 | 1.2:+70918317 | None:intergenic |
CTGCCTTCGAAATGACGATT+TGG | 0.433035 | 1.2:-70918900 | MS.gene60697:intron |
ACGTTTCTTTGAATGTATGA+TGG | 0.444285 | 1.2:+70918016 | None:intergenic |
ATTGTATATGGCGACTGCAC+TGG | 0.452158 | 1.2:-70918637 | MS.gene60697:CDS |
CTAAAGATTAATACTTGTAA+TGG | 0.454684 | 1.2:-70917746 | MS.gene60697:CDS |
CAGGAAGCACAAGACCTATA+GGG | 0.460045 | 1.2:+70918663 | None:intergenic |
CCTCATGATGATATTGCAAA+AGG | 0.461954 | 1.2:-70918302 | MS.gene60697:intron |
ATGTGTTGTTAAGAAGAAGT+TGG | 0.468642 | 1.2:+70917844 | None:intergenic |
GAGTTGATCCACTGCCTGTA+GGG | 0.472070 | 1.2:+70918342 | None:intergenic |
ATTAATAGTTGGGGATCCCC+TGG | 0.473898 | 1.2:+70918144 | None:intergenic |
TAAGAAGAAGTTGGGTGGTA+AGG | 0.474877 | 1.2:+70917853 | None:intergenic |
TGTGTTGTTAAGAAGAAGTT+GGG | 0.475145 | 1.2:+70917845 | None:intergenic |
GAGCTACTGACTCCGTCAAC+CGG | 0.475917 | 1.2:-70917644 | MS.gene60697:CDS |
CGTTTCTTTGAATGTATGAT+GGG | 0.486631 | 1.2:+70918017 | None:intergenic |
CATATTTGATCTAACTGGCA+AGG | 0.494738 | 1.2:-70918480 | MS.gene60697:CDS |
CACAGTTTCATTAATAGTTG+GGG | 0.500152 | 1.2:+70918135 | None:intergenic |
CTTAACAACACATCAACTAA+AGG | 0.504137 | 1.2:-70917834 | MS.gene60697:CDS |
GGAGTTGATCCACTGCCTGT+AGG | 0.504208 | 1.2:+70918341 | None:intergenic |
ATTCTGGAAAACTGAAGCCT+TGG | 0.521765 | 1.2:+70918066 | None:intergenic |
AAAACGAACCCTACAGGCAG+TGG | 0.523906 | 1.2:-70918350 | MS.gene60697:CDS |
TGAGGCTTTGTCATTTGAGG+TGG | 0.525085 | 1.2:+70918320 | None:intergenic |
TAAACGTAGATCTCGTGCAT+TGG | 0.536634 | 1.2:-70918095 | MS.gene60697:CDS |
AACTTCAAACAAAACATCTC+CGG | 0.543526 | 1.2:+70917625 | None:intergenic |
AAAATGAAAACGAACCCTAC+AGG | 0.548228 | 1.2:-70918356 | MS.gene60697:CDS |
ATACATTCAAAGAAACGTGC+TGG | 0.559290 | 1.2:-70918011 | MS.gene60697:intron |
AACAAAACATCTCCGGTTGA+CGG | 0.564670 | 1.2:+70917632 | None:intergenic |
GTATGACCATGTCGTACTGC+AGG | 0.568497 | 1.2:+70918398 | None:intergenic |
TTACCAAATCGTCATTTCGA+AGG | 0.572120 | 1.2:+70918897 | None:intergenic |
GGGAAGTTCCCTATAACACC+AGG | 0.577389 | 1.2:-70918162 | MS.gene60697:CDS |
TAAAAGAAGGAGGAGAACAC+GGG | 0.577526 | 1.2:+70918446 | None:intergenic |
CCCAACTATTAATGAAACTG+TGG | 0.601222 | 1.2:-70918134 | MS.gene60697:CDS |
AACACATCAACTAAAGGAGA+AGG | 0.602007 | 1.2:-70917828 | MS.gene60697:CDS |
ATAAAAGAAGGAGGAGAACA+CGG | 0.602898 | 1.2:+70918445 | None:intergenic |
TGCCAAAATCCATTGTTAGG+AGG | 0.618710 | 1.2:+70917776 | None:intergenic |
AGTCGCCATATACAATTACC+AGG | 0.628511 | 1.2:+70918644 | None:intergenic |
AATTGGAAGAGATTTGCTGA+AGG | 0.630721 | 1.2:-70918581 | MS.gene60697:CDS |
TCGTGCATTGGAGAATGCCA+AGG | 0.636441 | 1.2:-70918083 | MS.gene60697:CDS |
TCAAAACCTGCAGTACGACA+TGG | 0.647736 | 1.2:-70918404 | MS.gene60697:CDS |
TTTCCATGGATAAAAGAAGG+AGG | 0.655430 | 1.2:+70918436 | None:intergenic |
GGAAGTTCCCTATAACACCA+GGG | 0.689352 | 1.2:-70918161 | MS.gene60697:CDS |
GAAGTTCCCTATAACACCAG+GGG | 0.708966 | 1.2:-70918160 | MS.gene60697:CDS |
TTTCTTGGGAGGATGAAGAG+GGG | 0.717447 | 1.2:+70918376 | None:intergenic |
GTTGTTAAGAAGAAGTTGGG+TGG | 0.718192 | 1.2:+70917848 | None:intergenic |
AAAAGAAGGAGGAGAACACG+GGG | 0.769991 | 1.2:+70918447 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAATTAAATTAATTAAT+AGG | - | chr1.2:70918367-70918386 | MS.gene60697:CDS | 0.0% |
!! | AAATTAATTAATAGGTAAAA+GGG | - | chr1.2:70918375-70918394 | MS.gene60697:CDS | 10.0% |
!! | TAAATTAATTAATAGGTAAA+AGG | - | chr1.2:70918374-70918393 | MS.gene60697:CDS | 10.0% |
!!! | ATTTAATTTAATTTGAGACA+CGG | + | chr1.2:70918359-70918378 | None:intergenic | 15.0% |
!!! | TTTGTTTGTTATAATAATGT+CGG | - | chr1.2:70917778-70917797 | MS.gene60697:CDS | 15.0% |
!! | CTAAAGATTAATACTTGTAA+TGG | - | chr1.2:70918811-70918830 | MS.gene60697:intron | 20.0% |
!!! | CAAATAATATCTTTTAACGA+TGG | - | chr1.2:70918835-70918854 | MS.gene60697:intron | 20.0% |
!!! | GTTTTTGCTTTATATATTTC+TGG | - | chr1.2:70918572-70918591 | MS.gene60697:CDS | 20.0% |
! | AAAAATGAATCACACGAATA+TGG | + | chr1.2:70917739-70917758 | None:intergenic | 25.0% |
! | ATAACAAACAAACAGTAGTA+AGG | + | chr1.2:70917770-70917789 | None:intergenic | 25.0% |
! | CTCATGTGATATTAAACAAT+TGG | - | chr1.2:70917959-70917978 | MS.gene60697:intron | 25.0% |
! | TAACAAACAAACAGTAGTAA+GGG | + | chr1.2:70917769-70917788 | None:intergenic | 25.0% |
! | TCTACGTTTAATATCTTCTT+CGG | + | chr1.2:70918452-70918471 | None:intergenic | 25.0% |
!! | ATATCCCATTAGCATTTTTA+GGG | - | chr1.2:70918050-70918069 | MS.gene60697:CDS | 25.0% |
!! | ATCAACAATTTTGCAAAACT+TGG | + | chr1.2:70917632-70917651 | None:intergenic | 25.0% |
!! | TAATATCTTTTAACGATGGT+TGG | - | chr1.2:70918839-70918858 | MS.gene60697:intron | 25.0% |
!!! | GAATGAAAGTATTGTTATTC+TGG | + | chr1.2:70918510-70918529 | None:intergenic | 25.0% |
!!! | TTTGATGTTTTGATTTTCCA+TGG | + | chr1.2:70918138-70918157 | None:intergenic | 25.0% |
AAAATGAAAACCGTCAAAAC+AGG | - | chr1.2:70918681-70918700 | MS.gene60697:CDS | 30.0% | |
AACTTCAAACAAAACATCTC+CGG | + | chr1.2:70918935-70918954 | None:intergenic | 30.0% | |
AATAGCATGAGCATAGTTTA+TGG | + | chr1.2:70918311-70918330 | None:intergenic | 30.0% | |
ACCACAGTTTCATTAATAGT+TGG | + | chr1.2:70918427-70918446 | None:intergenic | 30.0% | |
ACGTTTCTTTGAATGTATGA+TGG | + | chr1.2:70918544-70918563 | None:intergenic | 30.0% | |
CACAGTTTCATTAATAGTTG+GGG | + | chr1.2:70918425-70918444 | None:intergenic | 30.0% | |
CCACAGTTTCATTAATAGTT+GGG | + | chr1.2:70918426-70918445 | None:intergenic | 30.0% | |
CGTTTCTTTGAATGTATGAT+GGG | + | chr1.2:70918543-70918562 | None:intergenic | 30.0% | |
CTTAACAACACATCAACTAA+AGG | - | chr1.2:70918723-70918742 | MS.gene60697:intron | 30.0% | |
GAAACCCTAAAAATGCTAAT+GGG | + | chr1.2:70918057-70918076 | None:intergenic | 30.0% | |
GCGGACAATAAATTGAAAAT+AGG | - | chr1.2:70918874-70918893 | MS.gene60697:intron | 30.0% | |
GTTTCCATATTTGATCTAAC+TGG | - | chr1.2:70918072-70918091 | MS.gene60697:CDS | 30.0% | |
TGAACAATGAAGATTTAGTG+AGG | + | chr1.2:70917707-70917726 | None:intergenic | 30.0% | |
! | ATGTGTTGTTAAGAAGAAGT+TGG | + | chr1.2:70918716-70918735 | None:intergenic | 30.0% |
! | CATATCCCATTAGCATTTTT+AGG | - | chr1.2:70918049-70918068 | MS.gene60697:CDS | 30.0% |
! | GATTTTCCATGGATAAAAGA+AGG | + | chr1.2:70918127-70918146 | None:intergenic | 30.0% |
! | TGTGTTGTTAAGAAGAAGTT+GGG | + | chr1.2:70918715-70918734 | None:intergenic | 30.0% |
AAAATGAAAACGAACCCTAC+AGG | - | chr1.2:70918201-70918220 | MS.gene60697:intron | 35.0% | |
AACACATCAACTAAAGGAGA+AGG | - | chr1.2:70918729-70918748 | MS.gene60697:intron | 35.0% | |
AAGATTTAGTGAGGCAATCA+AGG | + | chr1.2:70917698-70917717 | None:intergenic | 35.0% | |
AGATGCCAAAATCCATTGTT+AGG | + | chr1.2:70918787-70918806 | None:intergenic | 35.0% | |
ATAAAAGAAGGAGGAGAACA+CGG | + | chr1.2:70918115-70918134 | None:intergenic | 35.0% | |
ATACATTCAAAGAAACGTGC+TGG | - | chr1.2:70918546-70918565 | MS.gene60697:CDS | 35.0% | |
CATATTTGATCTAACTGGCA+AGG | - | chr1.2:70918077-70918096 | MS.gene60697:CDS | 35.0% | |
CCCAACTATTAATGAAACTG+TGG | - | chr1.2:70918423-70918442 | MS.gene60697:CDS | 35.0% | |
CCTCATGATGATATTGCAAA+AGG | - | chr1.2:70918255-70918274 | MS.gene60697:intron | 35.0% | |
CTTGCCAGTTAGATCAAATA+TGG | + | chr1.2:70918079-70918098 | None:intergenic | 35.0% | |
GGAAACCCTAAAAATGCTAA+TGG | + | chr1.2:70918058-70918077 | None:intergenic | 35.0% | |
TGCTTCCTGGTAATTGTATA+TGG | - | chr1.2:70917908-70917927 | MS.gene60697:intron | 35.0% | |
TTACCAAATCGTCATTTCGA+AGG | + | chr1.2:70917663-70917682 | None:intergenic | 35.0% | |
TTTATGGAAGGAAGGAAAGA+AGG | + | chr1.2:70918295-70918314 | None:intergenic | 35.0% | |
TTTCCATGGATAAAAGAAGG+AGG | + | chr1.2:70918124-70918143 | None:intergenic | 35.0% | |
! | AGGGTTCGTTTTCATTTTCT+TGG | + | chr1.2:70918199-70918218 | None:intergenic | 35.0% |
! | CCTTTTGCAATATCATCATG+AGG | + | chr1.2:70918258-70918277 | None:intergenic | 35.0% |
! | GGGTTCGTTTTCATTTTCTT+GGG | + | chr1.2:70918198-70918217 | None:intergenic | 35.0% |
! | TGGTTGGAAGAATTTTGTTG+CGG | - | chr1.2:70918855-70918874 | MS.gene60697:intron | 35.0% |
! | TTCGTTTTCATTTTCTTGGG+AGG | + | chr1.2:70918195-70918214 | None:intergenic | 35.0% |
!! | AATTGGAAGAGATTTGCTGA+AGG | - | chr1.2:70917976-70917995 | MS.gene60697:intron | 35.0% |
!! | AGCATTGAGTCGTGAATTTT+GGG | - | chr1.2:70917858-70917877 | MS.gene60697:intron | 35.0% |
!! | GATGATATTTCTAGCCCTAT+AGG | - | chr1.2:70917880-70917899 | MS.gene60697:intron | 35.0% |
AACAAAACATCTCCGGTTGA+CGG | + | chr1.2:70918928-70918947 | None:intergenic | 40.0% | |
AGTCGCCATATACAATTACC+AGG | + | chr1.2:70917916-70917935 | None:intergenic | 40.0% | |
GAGCATAGTTTATGGAAGGA+AGG | + | chr1.2:70918303-70918322 | None:intergenic | 40.0% | |
GATCTAACTGGCAAGGAAAT+TGG | - | chr1.2:70918084-70918103 | MS.gene60697:CDS | 40.0% | |
GCATGAGCATAGTTTATGGA+AGG | + | chr1.2:70918307-70918326 | None:intergenic | 40.0% | |
GTTGTTAAGAAGAAGTTGGG+TGG | + | chr1.2:70918712-70918731 | None:intergenic | 40.0% | |
TAAAAGAAGGAGGAGAACAC+GGG | + | chr1.2:70918114-70918133 | None:intergenic | 40.0% | |
TAAACGTAGATCTCGTGCAT+TGG | - | chr1.2:70918462-70918481 | MS.gene60697:CDS | 40.0% | |
TAAGAAGAAGTTGGGTGGTA+AGG | + | chr1.2:70918707-70918726 | None:intergenic | 40.0% | |
TGCCAAAATCCATTGTTAGG+AGG | + | chr1.2:70918784-70918803 | None:intergenic | 40.0% | |
! | ATTCTGGAAAACTGAAGCCT+TGG | + | chr1.2:70918494-70918513 | None:intergenic | 40.0% |
! | ATTTTCTTGGGAGGATGAAG+AGG | + | chr1.2:70918186-70918205 | None:intergenic | 40.0% |
! | TCATGAGGCTTTGTCATTTG+AGG | + | chr1.2:70918243-70918262 | None:intergenic | 40.0% |
! | TCTCCTCCTTCTTTTATCCA+TGG | - | chr1.2:70918118-70918137 | MS.gene60697:CDS | 40.0% |
! | TTTTCTTGGGAGGATGAAGA+GGG | + | chr1.2:70918185-70918204 | None:intergenic | 40.0% |
!! | CAGCATTGAGTCGTGAATTT+TGG | - | chr1.2:70917857-70917876 | MS.gene60697:CDS | 40.0% |
!! | CTCCTCCTAACAATGGATTT+TGG | - | chr1.2:70918779-70918798 | MS.gene60697:intron | 40.0% |
!! | CTTTTGACTCCTCCTAACAA+TGG | - | chr1.2:70918772-70918791 | MS.gene60697:intron | 40.0% |
!! | GTCAAGCTTAGTTCTGCAAT+TGG | - | chr1.2:70918638-70918657 | MS.gene60697:CDS | 40.0% |
AAAAGAAGGAGGAGAACACG+GGG | + | chr1.2:70918113-70918132 | None:intergenic | 45.0% | |
ATTAATAGTTGGGGATCCCC+TGG | + | chr1.2:70918416-70918435 | None:intergenic | 45.0% | |
ATTGTATATGGCGACTGCAC+TGG | - | chr1.2:70917920-70917939 | MS.gene60697:intron | 45.0% | |
CTGCCTTCGAAATGACGATT+TGG | - | chr1.2:70917657-70917676 | MS.gene60697:CDS | 45.0% | |
GAAGTTCCCTATAACACCAG+GGG | - | chr1.2:70918397-70918416 | MS.gene60697:CDS | 45.0% | |
GGAAGTTCCCTATAACACCA+GGG | - | chr1.2:70918396-70918415 | MS.gene60697:CDS | 45.0% | |
TCAAAACCTGCAGTACGACA+TGG | - | chr1.2:70918153-70918172 | MS.gene60697:CDS | 45.0% | |
TTAGTGAGGCAATCAAGGAC+TGG | + | chr1.2:70917693-70917712 | None:intergenic | 45.0% | |
TTTCTTGGGAGGATGAAGAG+GGG | + | chr1.2:70918184-70918203 | None:intergenic | 45.0% | |
! | CAGGAAGCACAAGACCTATA+GGG | + | chr1.2:70917897-70917916 | None:intergenic | 45.0% |
! | TGAGGCTTTGTCATTTGAGG+TGG | + | chr1.2:70918240-70918259 | None:intergenic | 45.0% |
AAAACGAACCCTACAGGCAG+TGG | - | chr1.2:70918207-70918226 | MS.gene60697:intron | 50.0% | |
GGGAAGTTCCCTATAACACC+AGG | - | chr1.2:70918395-70918414 | MS.gene60697:CDS | 50.0% | |
GTATGACCATGTCGTACTGC+AGG | + | chr1.2:70918162-70918181 | None:intergenic | 50.0% | |
TCGTGCATTGGAGAATGCCA+AGG | - | chr1.2:70918474-70918493 | MS.gene60697:CDS | 50.0% | |
! | CCAGGAAGCACAAGACCTAT+AGG | + | chr1.2:70917898-70917917 | None:intergenic | 50.0% |
! | CCTATAGGTCTTGTGCTTCC+TGG | - | chr1.2:70917895-70917914 | MS.gene60697:intron | 50.0% |
! | GAGTTGATCCACTGCCTGTA+GGG | + | chr1.2:70918218-70918237 | None:intergenic | 50.0% |
!! | GGTGGTAAGGCCTGTTTTGA+CGG | + | chr1.2:70918694-70918713 | None:intergenic | 50.0% |
! | GGAGTTGATCCACTGCCTGT+AGG | + | chr1.2:70918219-70918238 | None:intergenic | 55.0% |
!! | GAGCTACTGACTCCGTCAAC+CGG | - | chr1.2:70918913-70918932 | MS.gene60697:CDS | 55.0% |
!! | GGGGATCCCCTGGTGTTATA+GGG | + | chr1.2:70918406-70918425 | None:intergenic | 55.0% |
!! | TGGGGATCCCCTGGTGTTAT+AGG | + | chr1.2:70918407-70918426 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 70917598 | 70918981 | 70917598 | ID=MS.gene60697 |
chr1.2 | mRNA | 70917598 | 70918981 | 70917598 | ID=MS.gene60697.t1;Parent=MS.gene60697 |
chr1.2 | exon | 70918901 | 70918981 | 70918901 | ID=MS.gene60697.t1.exon1;Parent=MS.gene60697.t1 |
chr1.2 | CDS | 70918901 | 70918981 | 70918901 | ID=cds.MS.gene60697.t1;Parent=MS.gene60697.t1 |
chr1.2 | exon | 70918303 | 70918729 | 70918303 | ID=MS.gene60697.t1.exon2;Parent=MS.gene60697.t1 |
chr1.2 | CDS | 70918303 | 70918729 | 70918303 | ID=cds.MS.gene60697.t1;Parent=MS.gene60697.t1 |
chr1.2 | exon | 70918012 | 70918190 | 70918012 | ID=MS.gene60697.t1.exon3;Parent=MS.gene60697.t1 |
chr1.2 | CDS | 70918012 | 70918190 | 70918012 | ID=cds.MS.gene60697.t1;Parent=MS.gene60697.t1 |
chr1.2 | exon | 70917598 | 70917876 | 70917598 | ID=MS.gene60697.t1.exon4;Parent=MS.gene60697.t1 |
chr1.2 | CDS | 70917598 | 70917876 | 70917598 | ID=cds.MS.gene60697.t1;Parent=MS.gene60697.t1 |
Gene Sequence |
Protein sequence |