Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60706.t1 | XP_024641918.1 | 97.8 | 458 | 9 | 1 | 1 | 457 | 22 | 479 | 4.80E-256 | 893.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60706.t1 | Q84WW6 | 64.6 | 463 | 148 | 6 | 2 | 449 | 28 | 489 | 4.8e-164 | 578.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60706.t1 | A0A396JTL7 | 97.8 | 458 | 9 | 1 | 1 | 457 | 22 | 479 | 3.5e-256 | 893.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene60706.t1 | TR | SET |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60706.t1 | MTR_1g098370 | 97.802 | 455 | 9 | 1 | 4 | 457 | 39 | 493 | 0.0 | 909 |
MS.gene60706.t1 | MTR_1g098000 | 96.923 | 455 | 13 | 1 | 4 | 457 | 36 | 490 | 0.0 | 902 |
MS.gene60706.t1 | MTR_1g098030 | 85.492 | 193 | 5 | 3 | 222 | 412 | 30 | 201 | 1.72e-103 | 306 |
MS.gene60706.t1 | MTR_3g088625 | 42.152 | 223 | 126 | 3 | 2 | 223 | 1158 | 1378 | 1.15e-53 | 194 |
MS.gene60706.t1 | MTR_3g088625 | 42.152 | 223 | 126 | 3 | 2 | 223 | 1264 | 1484 | 1.20e-53 | 194 |
MS.gene60706.t1 | MTR_6g059310 | 43.842 | 203 | 111 | 3 | 3 | 205 | 54 | 253 | 3.15e-45 | 160 |
MS.gene60706.t1 | MTR_6g059310 | 43.842 | 203 | 111 | 3 | 3 | 205 | 54 | 253 | 4.43e-45 | 160 |
MS.gene60706.t1 | MTR_0071s0100 | 40.110 | 182 | 105 | 3 | 26 | 207 | 176 | 353 | 2.63e-36 | 138 |
MS.gene60706.t1 | MTR_8g078490 | 37.143 | 175 | 89 | 4 | 46 | 202 | 1081 | 1252 | 3.75e-24 | 106 |
MS.gene60706.t1 | MTR_5g018850 | 35.503 | 169 | 94 | 2 | 45 | 198 | 1334 | 1502 | 4.46e-23 | 103 |
MS.gene60706.t1 | MTR_4g132610 | 34.706 | 170 | 92 | 3 | 46 | 198 | 875 | 1042 | 6.61e-23 | 102 |
MS.gene60706.t1 | MTR_2g036060 | 38.406 | 138 | 81 | 2 | 75 | 212 | 1069 | 1202 | 1.66e-22 | 101 |
MS.gene60706.t1 | MTR_2g036060 | 38.406 | 138 | 81 | 2 | 75 | 212 | 1044 | 1177 | 1.74e-22 | 101 |
MS.gene60706.t1 | MTR_8g042750 | 32.836 | 201 | 97 | 6 | 40 | 203 | 489 | 688 | 6.01e-21 | 96.3 |
MS.gene60706.t1 | MTR_5g016870 | 36.095 | 169 | 92 | 3 | 21 | 182 | 672 | 831 | 6.88e-21 | 96.3 |
MS.gene60706.t1 | MTR_8g027725 | 36.424 | 151 | 92 | 3 | 55 | 202 | 799 | 948 | 5.00e-20 | 93.6 |
MS.gene60706.t1 | MTR_8g027725 | 36.424 | 151 | 92 | 3 | 55 | 202 | 784 | 933 | 5.43e-20 | 93.6 |
MS.gene60706.t1 | MTR_3g091310 | 36.242 | 149 | 91 | 3 | 57 | 202 | 915 | 1062 | 5.51e-20 | 93.6 |
MS.gene60706.t1 | MTR_3g091310 | 36.242 | 149 | 91 | 3 | 57 | 202 | 821 | 968 | 5.99e-20 | 93.6 |
MS.gene60706.t1 | MTR_5g013420 | 34.343 | 198 | 92 | 8 | 40 | 202 | 894 | 1088 | 6.48e-20 | 93.6 |
MS.gene60706.t1 | MTR_8g078505 | 34.337 | 166 | 95 | 3 | 46 | 198 | 369 | 533 | 9.35e-20 | 92.4 |
MS.gene60706.t1 | MTR_7g117355 | 38.158 | 152 | 88 | 4 | 55 | 202 | 814 | 963 | 1.11e-19 | 92.8 |
MS.gene60706.t1 | MTR_7g021365 | 36.943 | 157 | 89 | 3 | 69 | 224 | 911 | 1058 | 1.32e-19 | 92.4 |
MS.gene60706.t1 | MTR_7g088370 | 32.065 | 184 | 103 | 5 | 40 | 202 | 522 | 704 | 1.73e-19 | 92.0 |
MS.gene60706.t1 | MTR_7g055660 | 38.281 | 128 | 70 | 2 | 64 | 184 | 583 | 708 | 2.05e-19 | 91.7 |
MS.gene60706.t1 | MTR_1g008230 | 35.762 | 151 | 93 | 3 | 55 | 202 | 884 | 1033 | 2.59e-19 | 91.7 |
MS.gene60706.t1 | MTR_1g008230 | 35.526 | 152 | 94 | 3 | 55 | 203 | 606 | 756 | 3.29e-19 | 90.9 |
MS.gene60706.t1 | MTR_4g010830 | 31.658 | 199 | 90 | 7 | 40 | 199 | 785 | 976 | 4.89e-19 | 90.9 |
MS.gene60706.t1 | MTR_1g086980 | 36.923 | 130 | 80 | 1 | 52 | 181 | 651 | 778 | 9.72e-19 | 89.7 |
MS.gene60706.t1 | MTR_1g086980 | 36.923 | 130 | 80 | 1 | 52 | 181 | 661 | 788 | 9.79e-19 | 89.7 |
MS.gene60706.t1 | MTR_5g013420 | 33.846 | 195 | 91 | 8 | 40 | 199 | 894 | 1085 | 9.92e-19 | 89.7 |
MS.gene60706.t1 | MTR_1g086980 | 36.923 | 130 | 80 | 1 | 52 | 181 | 671 | 798 | 1.06e-18 | 89.7 |
MS.gene60706.t1 | MTR_1g086980 | 36.923 | 130 | 80 | 1 | 52 | 181 | 599 | 726 | 1.07e-18 | 89.4 |
MS.gene60706.t1 | MTR_1g086980 | 36.923 | 130 | 80 | 1 | 52 | 181 | 620 | 747 | 1.07e-18 | 89.4 |
MS.gene60706.t1 | MTR_1g086980 | 36.923 | 130 | 80 | 1 | 52 | 181 | 471 | 598 | 1.20e-18 | 89.0 |
MS.gene60706.t1 | MTR_1g012910 | 35.461 | 141 | 86 | 2 | 67 | 202 | 530 | 670 | 1.43e-18 | 89.0 |
MS.gene60706.t1 | MTR_1g048950 | 37.107 | 159 | 77 | 7 | 54 | 199 | 381 | 529 | 1.69e-18 | 88.6 |
MS.gene60706.t1 | MTR_1g012890 | 35.461 | 141 | 86 | 2 | 67 | 202 | 227 | 367 | 2.45e-18 | 86.7 |
MS.gene60706.t1 | MTR_1g012910 | 35.461 | 141 | 86 | 2 | 67 | 202 | 367 | 507 | 2.89e-18 | 87.4 |
MS.gene60706.t1 | MTR_3g011440 | 31.980 | 197 | 95 | 7 | 40 | 198 | 464 | 659 | 7.32e-17 | 83.6 |
MS.gene60706.t1 | MTR_7g445600 | 37.398 | 123 | 54 | 5 | 64 | 180 | 251 | 356 | 1.02e-15 | 78.6 |
MS.gene60706.t1 | MTR_7g450730 | 29.947 | 187 | 101 | 7 | 16 | 182 | 301 | 477 | 4.91e-15 | 77.4 |
MS.gene60706.t1 | MTR_6g027690 | 32.667 | 150 | 85 | 4 | 46 | 179 | 247 | 396 | 9.25e-15 | 76.3 |
MS.gene60706.t1 | MTR_7g109560 | 36.697 | 109 | 67 | 1 | 74 | 182 | 623 | 729 | 1.18e-13 | 73.6 |
MS.gene60706.t1 | MTR_1g069570 | 29.050 | 179 | 95 | 6 | 46 | 198 | 569 | 741 | 4.13e-13 | 72.0 |
MS.gene60706.t1 | MTR_7g084090 | 30.198 | 202 | 101 | 7 | 40 | 202 | 556 | 756 | 5.91e-13 | 71.6 |
MS.gene60706.t1 | MTR_7g445530 | 29.375 | 160 | 68 | 6 | 64 | 180 | 356 | 513 | 1.54e-12 | 69.7 |
MS.gene60706.t1 | MTR_6g061200 | 31.319 | 182 | 96 | 8 | 40 | 202 | 493 | 664 | 2.22e-12 | 69.7 |
MS.gene60706.t1 | MTR_4g010550 | 30.000 | 180 | 102 | 8 | 40 | 199 | 285 | 460 | 8.22e-12 | 67.4 |
MS.gene60706.t1 | MTR_6g061270 | 28.713 | 202 | 104 | 7 | 40 | 202 | 493 | 693 | 2.80e-11 | 66.2 |
MS.gene60706.t1 | MTR_7g098390 | 28.324 | 173 | 104 | 5 | 46 | 198 | 525 | 697 | 9.35e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene60706.t1 | AT1G76710 | 64.579 | 463 | 148 | 6 | 2 | 449 | 28 | 489 | 0.0 | 590 |
MS.gene60706.t1 | AT1G76710 | 64.579 | 463 | 148 | 6 | 2 | 449 | 28 | 489 | 0.0 | 590 |
MS.gene60706.t1 | AT1G76710 | 63.347 | 472 | 148 | 7 | 2 | 449 | 28 | 498 | 0.0 | 582 |
MS.gene60706.t1 | AT1G76710 | 61.020 | 490 | 148 | 7 | 2 | 449 | 28 | 516 | 0.0 | 576 |
MS.gene60706.t1 | AT1G77300 | 42.222 | 225 | 122 | 4 | 2 | 223 | 966 | 1185 | 1.15e-54 | 197 |
MS.gene60706.t1 | AT1G77300 | 42.222 | 225 | 122 | 4 | 2 | 223 | 966 | 1185 | 1.27e-54 | 197 |
MS.gene60706.t1 | AT4G30860 | 41.667 | 180 | 101 | 3 | 28 | 207 | 294 | 469 | 8.70e-36 | 139 |
MS.gene60706.t1 | AT3G59960 | 43.503 | 177 | 78 | 4 | 46 | 205 | 81 | 252 | 1.22e-34 | 131 |
MS.gene60706.t1 | AT3G59960 | 43.503 | 177 | 78 | 4 | 46 | 205 | 81 | 252 | 1.22e-34 | 131 |
MS.gene60706.t1 | AT3G59960 | 43.503 | 177 | 78 | 4 | 46 | 205 | 81 | 252 | 1.22e-34 | 131 |
MS.gene60706.t1 | AT3G59960 | 42.775 | 173 | 85 | 2 | 46 | 205 | 81 | 252 | 5.97e-34 | 130 |
MS.gene60706.t1 | AT2G44150 | 41.618 | 173 | 87 | 2 | 46 | 205 | 86 | 257 | 1.76e-33 | 129 |
MS.gene60706.t1 | AT5G42400 | 42.742 | 124 | 70 | 1 | 75 | 198 | 1261 | 1383 | 2.34e-25 | 110 |
MS.gene60706.t1 | AT5G42400 | 42.742 | 124 | 70 | 1 | 75 | 198 | 1261 | 1383 | 2.34e-25 | 110 |
MS.gene60706.t1 | AT5G42400 | 42.742 | 124 | 70 | 1 | 75 | 198 | 1261 | 1383 | 2.34e-25 | 110 |
MS.gene60706.t1 | AT5G42400 | 42.742 | 124 | 70 | 1 | 75 | 198 | 1261 | 1383 | 2.34e-25 | 110 |
MS.gene60706.t1 | AT5G42400 | 42.742 | 124 | 70 | 1 | 75 | 198 | 1261 | 1383 | 2.34e-25 | 110 |
MS.gene60706.t1 | AT5G42400 | 42.742 | 124 | 70 | 1 | 75 | 198 | 1261 | 1383 | 2.34e-25 | 110 |
MS.gene60706.t1 | AT5G42400 | 42.742 | 124 | 70 | 1 | 75 | 198 | 1261 | 1383 | 2.34e-25 | 110 |
MS.gene60706.t1 | AT5G42400 | 42.742 | 124 | 70 | 1 | 75 | 198 | 1261 | 1383 | 2.34e-25 | 110 |
MS.gene60706.t1 | AT1G05830 | 36.257 | 171 | 96 | 5 | 47 | 213 | 900 | 1061 | 5.39e-21 | 97.1 |
MS.gene60706.t1 | AT1G05830 | 36.257 | 171 | 96 | 5 | 47 | 213 | 900 | 1061 | 5.39e-21 | 97.1 |
MS.gene60706.t1 | AT1G05830 | 36.257 | 171 | 96 | 5 | 47 | 213 | 900 | 1061 | 5.39e-21 | 97.1 |
MS.gene60706.t1 | AT1G05830 | 36.257 | 171 | 96 | 5 | 47 | 213 | 900 | 1061 | 5.39e-21 | 97.1 |
MS.gene60706.t1 | AT2G35160 | 35.795 | 176 | 87 | 8 | 40 | 199 | 625 | 790 | 7.35e-21 | 96.3 |
MS.gene60706.t1 | AT2G35160 | 35.795 | 176 | 87 | 8 | 40 | 199 | 625 | 790 | 7.35e-21 | 96.3 |
MS.gene60706.t1 | AT2G35160 | 35.795 | 176 | 87 | 8 | 40 | 199 | 625 | 790 | 7.35e-21 | 96.3 |
MS.gene60706.t1 | AT2G35160 | 35.795 | 176 | 87 | 8 | 40 | 199 | 625 | 790 | 7.35e-21 | 96.3 |
MS.gene60706.t1 | AT2G35160 | 35.795 | 176 | 87 | 8 | 40 | 199 | 589 | 754 | 7.86e-21 | 96.3 |
MS.gene60706.t1 | AT4G27910 | 36.424 | 151 | 92 | 3 | 55 | 202 | 877 | 1026 | 2.70e-20 | 94.7 |
MS.gene60706.t1 | AT3G03750 | 36.667 | 180 | 94 | 6 | 38 | 198 | 167 | 345 | 3.04e-20 | 92.4 |
MS.gene60706.t1 | AT1G02580 | 33.728 | 169 | 95 | 3 | 27 | 190 | 518 | 674 | 5.04e-20 | 93.6 |
MS.gene60706.t1 | AT2G23740 | 37.255 | 153 | 75 | 4 | 45 | 179 | 1206 | 1355 | 6.99e-20 | 93.6 |
MS.gene60706.t1 | AT2G23740 | 37.255 | 153 | 75 | 4 | 45 | 179 | 1206 | 1355 | 6.99e-20 | 93.6 |
MS.gene60706.t1 | AT2G23740 | 37.255 | 153 | 75 | 4 | 45 | 179 | 1206 | 1355 | 6.99e-20 | 93.6 |
MS.gene60706.t1 | AT2G23740 | 37.255 | 153 | 75 | 4 | 45 | 179 | 1199 | 1348 | 7.04e-20 | 93.6 |
MS.gene60706.t1 | AT2G23380 | 38.168 | 131 | 79 | 1 | 52 | 182 | 741 | 869 | 7.37e-20 | 93.2 |
MS.gene60706.t1 | AT2G23380 | 38.168 | 131 | 79 | 1 | 52 | 182 | 514 | 642 | 1.25e-19 | 92.4 |
MS.gene60706.t1 | AT3G61740 | 37.255 | 153 | 89 | 4 | 55 | 202 | 831 | 981 | 1.93e-19 | 92.0 |
MS.gene60706.t1 | AT3G61740 | 37.255 | 153 | 89 | 4 | 55 | 202 | 867 | 1017 | 2.33e-19 | 91.7 |
MS.gene60706.t1 | AT2G31650 | 35.673 | 171 | 97 | 5 | 47 | 213 | 879 | 1040 | 3.88e-19 | 91.3 |
MS.gene60706.t1 | AT4G02020 | 36.154 | 130 | 81 | 1 | 52 | 181 | 696 | 823 | 3.30e-18 | 88.2 |
MS.gene60706.t1 | AT5G53430 | 35.099 | 151 | 94 | 3 | 55 | 202 | 893 | 1042 | 4.03e-18 | 87.8 |
MS.gene60706.t1 | AT5G04940 | 30.653 | 199 | 101 | 7 | 40 | 203 | 474 | 670 | 3.49e-17 | 84.7 |
MS.gene60706.t1 | AT5G04940 | 30.653 | 199 | 101 | 7 | 40 | 203 | 474 | 670 | 3.49e-17 | 84.7 |
MS.gene60706.t1 | AT2G22740 | 32.512 | 203 | 96 | 9 | 37 | 202 | 591 | 789 | 1.86e-16 | 82.8 |
MS.gene60706.t1 | AT2G22740 | 32.512 | 203 | 96 | 9 | 37 | 202 | 591 | 789 | 1.86e-16 | 82.8 |
MS.gene60706.t1 | AT1G17770 | 32.105 | 190 | 93 | 8 | 44 | 198 | 500 | 688 | 2.05e-16 | 82.4 |
MS.gene60706.t1 | AT2G24740 | 28.796 | 191 | 100 | 6 | 48 | 203 | 566 | 755 | 1.12e-14 | 77.0 |
MS.gene60706.t1 | AT2G23740 | 39.286 | 112 | 51 | 3 | 45 | 142 | 1206 | 1314 | 3.26e-14 | 75.9 |
MS.gene60706.t1 | AT2G23740 | 39.286 | 112 | 51 | 3 | 45 | 142 | 1206 | 1314 | 3.26e-14 | 75.9 |
MS.gene60706.t1 | AT3G04380 | 28.261 | 184 | 94 | 7 | 46 | 200 | 285 | 459 | 2.19e-12 | 69.3 |
MS.gene60706.t1 | AT3G04380 | 28.261 | 184 | 94 | 7 | 46 | 200 | 285 | 459 | 2.29e-12 | 69.3 |
MS.gene60706.t1 | AT3G04380 | 28.261 | 184 | 94 | 7 | 46 | 200 | 258 | 432 | 2.70e-12 | 68.9 |
MS.gene60706.t1 | AT3G04380 | 28.261 | 184 | 94 | 7 | 46 | 200 | 269 | 443 | 2.90e-12 | 68.9 |
MS.gene60706.t1 | AT3G04380 | 28.261 | 184 | 94 | 7 | 46 | 200 | 258 | 432 | 2.98e-12 | 68.9 |
MS.gene60706.t1 | AT3G04380 | 28.261 | 184 | 94 | 7 | 46 | 200 | 242 | 416 | 3.56e-12 | 68.6 |
Find 99 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGGCCGAGGGTGGGGTCTTT+TGG | 0.223348 | 1.2:+71052623 | MS.gene60706:CDS |
GACCTTGAGTTTCATAAGTA+TGG | 0.226901 | 1.2:-71052831 | None:intergenic |
TTTGGCTGATGAGGAAATTA+AGG | 0.256975 | 1.2:+71052641 | MS.gene60706:CDS |
GTGCTTCCTTTGATGCTAAA+AGG | 0.263819 | 1.2:-71054632 | None:intergenic |
GAAGATCCTGTTTGGTATCT+TGG | 0.294712 | 1.2:-71054479 | None:intergenic |
CAAGATTTATAAACCATTCC+TGG | 0.303845 | 1.2:+71053005 | MS.gene60706:CDS |
CGCAGGAGGATACTTATCTA+TGG | 0.311586 | 1.2:+71053829 | MS.gene60706:intron |
ATTCAACCACTGAATTCAAT+TGG | 0.332627 | 1.2:+71054390 | MS.gene60706:CDS |
GCACTGGAAGATATTCCTAT+TGG | 0.334570 | 1.2:+71053226 | MS.gene60706:CDS |
CAAACTGTGAGACAAGAAAA+TGG | 0.346413 | 1.2:+71053170 | MS.gene60706:CDS |
AAGATCCTGTTTGGTATCTT+GGG | 0.359715 | 1.2:-71054478 | None:intergenic |
GCTTGGCCGGGTGCCCTTTG+AGG | 0.389466 | 1.2:-71055296 | None:intergenic |
ATCCTTCTCGTGTTCTTCAA+TGG | 0.405165 | 1.2:-71055159 | None:intergenic |
CTGAATTCAATTGGGATCAA+TGG | 0.406898 | 1.2:+71054399 | MS.gene60706:CDS |
ATTCTTTATACAATGAAATA+CGG | 0.412721 | 1.2:+71055132 | MS.gene60706:CDS |
CCTGACAGTGCCTGTGGAGA+TGG | 0.413253 | 1.2:+71051847 | MS.gene60706:CDS |
TCCTCCGCAGAGTCATATAA+AGG | 0.419793 | 1.2:-71054276 | None:intergenic |
CTCAAATGTTCTGAATTCCT+TGG | 0.432418 | 1.2:+71053319 | MS.gene60706:CDS |
ATGCCACAAGGGCAAAATCC+AGG | 0.434511 | 1.2:-71051904 | None:intergenic |
TCTATTGATGCAACTAGAAA+AGG | 0.434611 | 1.2:+71052974 | MS.gene60706:CDS |
TTTCATTGTATAAAGAATCA+AGG | 0.435719 | 1.2:-71055127 | None:intergenic |
TTCTCGTGTTCTTCAATGGC+AGG | 0.436989 | 1.2:-71055155 | None:intergenic |
ATCTCTACCAAAAGATCAAA+GGG | 0.444160 | 1.2:+71054555 | MS.gene60706:CDS |
TATTCCTATTGGAACTGAAC+TGG | 0.465129 | 1.2:+71053237 | MS.gene60706:CDS |
ATAAGTATGGGATCTGCGCT+TGG | 0.465834 | 1.2:-71052818 | None:intergenic |
AGTAGCAGAGAAGTGGATAC+AGG | 0.474675 | 1.2:+71055205 | MS.gene60706:CDS |
TTGAAGAGGTTTACCAGGAA+TGG | 0.476963 | 1.2:-71053018 | None:intergenic |
TATGCCAGTTCAGTTCCAAT+AGG | 0.481653 | 1.2:-71053241 | None:intergenic |
TCAATTGGGATCAATGGCTT+AGG | 0.484206 | 1.2:+71054405 | MS.gene60706:CDS |
AAAACTGAAGGCCGAGGGTG+GGG | 0.484563 | 1.2:+71052615 | MS.gene60706:CDS |
ACCTTGAGTTTCATAAGTAT+GGG | 0.487157 | 1.2:-71052830 | None:intergenic |
TTCAACCACTGAATTCAATT+GGG | 0.488608 | 1.2:+71054391 | MS.gene60706:CDS |
AGCTTTCAGTATAATAGCCA+TGG | 0.489595 | 1.2:-71054337 | None:intergenic |
CTGACAGTGCCTGTGGAGAT+GGG | 0.490971 | 1.2:+71051848 | MS.gene60706:CDS |
CCATCTCCACAGGCACTGTC+AGG | 0.494885 | 1.2:-71051847 | None:intergenic |
AGGGCACCCGGCCAAGCAAA+AGG | 0.495569 | 1.2:+71055302 | MS.gene60706:CDS |
TGTCGTAGATACACTGTCTT+GGG | 0.502526 | 1.2:-71055183 | None:intergenic |
ACCAGCACTGAATGCACCCC+TGG | 0.503846 | 1.2:+71051886 | MS.gene60706:CDS |
ACCAAGTTATTTAAAACTGA+AGG | 0.520954 | 1.2:+71052603 | MS.gene60706:CDS |
AAGAGTTGGAATATTTGCAC+TGG | 0.522066 | 1.2:+71053210 | MS.gene60706:CDS |
TTCATTGTATAAAGAATCAA+GGG | 0.526900 | 1.2:-71055126 | None:intergenic |
TGTTGCTTGTACTCCTCAAA+GGG | 0.529187 | 1.2:+71055283 | MS.gene60706:CDS |
ATGTTGCTTGTACTCCTCAA+AGG | 0.530019 | 1.2:+71055282 | MS.gene60706:CDS |
TGCCACAAGGGCAAAATCCA+GGG | 0.530653 | 1.2:-71051903 | None:intergenic |
TCCAGGGGTGCATTCAGTGC+TGG | 0.531693 | 1.2:-71051887 | None:intergenic |
AATGGTTTATAAATCTTGCA+AGG | 0.536559 | 1.2:-71053000 | None:intergenic |
CAGCCAAAAGACCCCACCCT+CGG | 0.537785 | 1.2:-71052626 | None:intergenic |
CATCTCTACCAAAAGATCAA+AGG | 0.539479 | 1.2:+71054554 | MS.gene60706:CDS |
CGCATTCGAAGTAACACTGC+AGG | 0.543043 | 1.2:+71054522 | MS.gene60706:CDS |
CTGTCGTAGATACACTGTCT+TGG | 0.543309 | 1.2:-71055184 | None:intergenic |
ACAAGAAAATGGAATGTCAT+GGG | 0.544715 | 1.2:+71053181 | MS.gene60706:CDS |
ATTGATGCAAAGTATGCAGC+TGG | 0.547593 | 1.2:+71054609 | MS.gene60706:CDS |
TTTAGCATCAAAGGAAGCAC+AGG | 0.547737 | 1.2:+71054635 | MS.gene60706:CDS |
TGAATGGTTTGGAGGTGCAA+AGG | 0.560782 | 1.2:+71053276 | MS.gene60706:CDS |
TAAAACTGAAGGCCGAGGGT+GGG | 0.562493 | 1.2:+71052614 | MS.gene60706:CDS |
CTACGACAGTAGCAGAGAAG+TGG | 0.567208 | 1.2:+71055198 | MS.gene60706:CDS |
AGCATCAAAGGAAGCACAGG+AGG | 0.568189 | 1.2:+71054638 | MS.gene60706:CDS |
GACAAGAAAATGGAATGTCA+TGG | 0.568296 | 1.2:+71053180 | MS.gene60706:CDS |
TTGATCCCAATTGAATTCAG+TGG | 0.569284 | 1.2:-71054396 | None:intergenic |
GCATAAGAAGCAGAAGGAGG+AGG | 0.570658 | 1.2:+71051786 | MS.gene60706:CDS |
GTACTCCCAAGATACCAAAC+AGG | 0.572352 | 1.2:+71054473 | MS.gene60706:CDS |
ATATTGCTATATGTGAATGC+AGG | 0.572676 | 1.2:+71051809 | MS.gene60706:CDS |
GCAGGAGGATACTTATCTAT+GGG | 0.575673 | 1.2:+71053830 | MS.gene60706:intron |
TATGGGAAGATGATGATGAC+AGG | 0.584972 | 1.2:+71053847 | MS.gene60706:CDS |
TTCCTTGGAGCAAAATCTCG+TGG | 0.586918 | 1.2:+71053334 | MS.gene60706:CDS |
TTATTTAAAACTGAAGGCCG+AGG | 0.589346 | 1.2:+71052609 | MS.gene60706:CDS |
TTTAAAACAGTGGACTCCGA+TGG | 0.593496 | 1.2:-71054366 | None:intergenic |
GATGAACTCACGTCAAATGT+TGG | 0.593891 | 1.2:+71054297 | MS.gene60706:CDS |
GGCTTCCTGCCTAAAACTCA+AGG | 0.598288 | 1.2:+71055226 | MS.gene60706:CDS |
TGCCATTGAAGAACACGAGA+AGG | 0.599044 | 1.2:+71055157 | MS.gene60706:CDS |
ACTGAAAGCTGAAGAACCAT+CGG | 0.600098 | 1.2:+71054350 | MS.gene60706:CDS |
GTGCAGGCATAAGAAGCAGA+AGG | 0.601872 | 1.2:+71051780 | MS.gene60706:intron |
TGGACAGAGTGAACAATCCA+TGG | 0.605363 | 1.2:+71054320 | MS.gene60706:CDS |
TTAAAACTGAAGGCCGAGGG+TGG | 0.605393 | 1.2:+71052613 | MS.gene60706:CDS |
TGTACTCCTCAAAGGGCACC+CGG | 0.607570 | 1.2:+71055290 | MS.gene60706:CDS |
AAATAGAAAGCGAGGACATG+AGG | 0.607787 | 1.2:+71054448 | MS.gene60706:CDS |
GAAAAGAAAAGATGACGCTA+CGG | 0.608952 | 1.2:+71055100 | MS.gene60706:intron |
CTCTACCAAAAGATCAAAGG+GGG | 0.611270 | 1.2:+71054557 | MS.gene60706:CDS |
GAAAACTGAAATAGAAAGCG+AGG | 0.615849 | 1.2:+71054440 | MS.gene60706:CDS |
TCCTTTATATGACTCTGCGG+AGG | 0.618388 | 1.2:+71054275 | MS.gene60706:CDS |
TATTTAAAACTGAAGGCCGA+GGG | 0.619845 | 1.2:+71052610 | MS.gene60706:CDS |
TCCCATACTTATGAAACTCA+AGG | 0.623281 | 1.2:+71052829 | MS.gene60706:CDS |
GCAAAGGTTCGCTGCCTCTG+TGG | 0.623435 | 1.2:+71053292 | MS.gene60706:CDS |
ATTTAGACACCCATCTCCAC+AGG | 0.625505 | 1.2:-71051857 | None:intergenic |
CAGTTTGTCATTGAATACTG+TGG | 0.640591 | 1.2:+71052772 | MS.gene60706:CDS |
CAAGAAAATGGAATGTCATG+GGG | 0.642373 | 1.2:+71053182 | MS.gene60706:CDS |
CATCAATTACGGATTAGATG+AGG | 0.646637 | 1.2:-71055372 | None:intergenic |
GAACTCACGTCAAATGTTGG+TGG | 0.647867 | 1.2:+71054300 | MS.gene60706:CDS |
CAGGCATAAGAAGCAGAAGG+AGG | 0.647886 | 1.2:+71051783 | MS.gene60706:intron |
TGGTTGAATATTTAAAACAG+TGG | 0.648383 | 1.2:-71054376 | None:intergenic |
ATTCGAAGTAACACTGCAGG+AGG | 0.651046 | 1.2:+71054525 | MS.gene60706:CDS |
GATGATCCTGACAGTGCCTG+TGG | 0.657570 | 1.2:+71051841 | MS.gene60706:CDS |
AACATTTGAGCGCACCACAG+AGG | 0.676482 | 1.2:-71053306 | None:intergenic |
GCCACAAGGGCAAAATCCAG+GGG | 0.678890 | 1.2:-71051902 | None:intergenic |
AAGAAAATGGAATGTCATGG+GGG | 0.698806 | 1.2:+71053183 | MS.gene60706:CDS |
AATTCCTTTATATGACTCTG+CGG | 0.704826 | 1.2:+71054272 | MS.gene60706:CDS |
TCTACCAAAAGATCAAAGGG+GGG | 0.707770 | 1.2:+71054558 | MS.gene60706:CDS |
TCTCTACCAAAAGATCAAAG+GGG | 0.724844 | 1.2:+71054556 | MS.gene60706:CDS |
TTCCTGCCTAAAACTCAAGG+CGG | 0.738527 | 1.2:+71055229 | MS.gene60706:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATTCTTTTGATATATTA+CGG | + | chr1.2:71053537-71053556 | MS.gene60706:intron | 10.0% |
!! | AAAGAAAAATAACCATATTA+AGG | - | chr1.2:71052692-71052711 | None:intergenic | 15.0% |
!! | AATCCTAATATTAAATGAAA+TGG | + | chr1.2:71053046-71053065 | MS.gene60706:intron | 15.0% |
!! | ATTCTTTATACAATGAAATA+CGG | + | chr1.2:71055132-71055151 | MS.gene60706:CDS | 15.0% |
!! | TTGTTAAAAATATTATCACT+CGG | + | chr1.2:71049851-71049870 | MS.gene60706:intron | 15.0% |
!!! | AAAAAATGCTCAAAATATTT+TGG | - | chr1.2:71050804-71050823 | None:intergenic | 15.0% |
!!! | CATTTTCTTATCATTTATTT+AGG | + | chr1.2:71049767-71049786 | MS.gene60706:intron | 15.0% |
!!! | TCAGTTTTATAAAGAAAAAA+AGG | - | chr1.2:71050128-71050147 | None:intergenic | 15.0% |
!!! | TCTTTTTCATTGATTATTAT+TGG | + | chr1.2:71053763-71053782 | MS.gene60706:intron | 15.0% |
!! | AAATTAAGGTAATCATATAC+TGG | + | chr1.2:71052655-71052674 | MS.gene60706:intron | 20.0% |
!! | AATAATCAATGAAAAAGAGA+AGG | - | chr1.2:71053761-71053780 | None:intergenic | 20.0% |
!! | AATATTGAAAATTATTGGAC+CGG | - | chr1.2:71050050-71050069 | None:intergenic | 20.0% |
!! | AATTAAGGTAATCATATACT+GGG | + | chr1.2:71052656-71052675 | MS.gene60706:intron | 20.0% |
!! | AATTCAATATGGAAAAGTTT+CGG | - | chr1.2:71050634-71050653 | None:intergenic | 20.0% |
!! | ATTACTGTTATGAGTTATTT+AGG | + | chr1.2:71049930-71049949 | MS.gene60706:intron | 20.0% |
!! | ATTTAGTAGAACTAAAACAA+AGG | - | chr1.2:71051100-71051119 | None:intergenic | 20.0% |
!! | CAGAACATTATATTGTATAT+AGG | + | chr1.2:71051441-71051460 | MS.gene60706:intron | 20.0% |
!! | GTTCTTACAAATTATAACAA+GGG | - | chr1.2:71054850-71054869 | None:intergenic | 20.0% |
!! | TGTTCTTACAAATTATAACA+AGG | - | chr1.2:71054851-71054870 | None:intergenic | 20.0% |
!! | TTCAGTGTTAATAAATAATG+AGG | + | chr1.2:71053590-71053609 | MS.gene60706:intron | 20.0% |
!! | TTCATTGTATAAAGAATCAA+GGG | - | chr1.2:71055129-71055148 | None:intergenic | 20.0% |
!! | TTTAGTAGAACTAAAACAAA+GGG | - | chr1.2:71051099-71051118 | None:intergenic | 20.0% |
!! | TTTATAATCAGAAAAAGAGA+GGG | - | chr1.2:71050731-71050750 | None:intergenic | 20.0% |
!! | TTTCATTGTATAAAGAATCA+AGG | - | chr1.2:71055130-71055149 | None:intergenic | 20.0% |
!! | TTTGTTTGTTTATTTCATAC+AGG | + | chr1.2:71052744-71052763 | MS.gene60706:intron | 20.0% |
!!! | AAAAAGTATGCAATGAAAAT+AGG | - | chr1.2:71052218-71052237 | None:intergenic | 20.0% |
!!! | CATATGACTATAATTTTGAA+TGG | + | chr1.2:71053260-71053279 | MS.gene60706:CDS | 20.0% |
!!! | TCATTCAAGCTATATTATTT+TGG | - | chr1.2:71054949-71054968 | None:intergenic | 20.0% |
!!! | TTATGAGTTATTTAGGTTAT+AGG | + | chr1.2:71049937-71049956 | MS.gene60706:intron | 20.0% |
!!! | TTATGTAAGTTTTGATATAG+TGG | + | chr1.2:71053635-71053654 | MS.gene60706:intron | 20.0% |
!!! | TTTTATAATCAGAAAAAGAG+AGG | - | chr1.2:71050732-71050751 | None:intergenic | 20.0% |
! | AAAAAAATTGATATATCCGC+CGG | - | chr1.2:71050607-71050626 | None:intergenic | 25.0% |
! | AAATACTTTGAATTGCTTTC+AGG | - | chr1.2:71054081-71054100 | None:intergenic | 25.0% |
! | AACATCGATCAATCAATTAA+CGG | + | chr1.2:71050298-71050317 | MS.gene60706:intron | 25.0% |
! | AACTACAAAGTTAAAATACC+AGG | - | chr1.2:71054775-71054794 | None:intergenic | 25.0% |
! | AATGGTTTATAAATCTTGCA+AGG | - | chr1.2:71053003-71053022 | None:intergenic | 25.0% |
! | AGATGATGATATTCAGTAAT+TGG | - | chr1.2:71054713-71054732 | None:intergenic | 25.0% |
! | AGCTAGTGAACAAATAATAA+AGG | - | chr1.2:71050755-71050774 | None:intergenic | 25.0% |
! | AGGATATAATACAATTCGAT+TGG | - | chr1.2:71051569-71051588 | None:intergenic | 25.0% |
! | ATATTCTTCAATGTAACTTC+CGG | + | chr1.2:71050510-71050529 | MS.gene60706:intron | 25.0% |
! | ATTAAGGTAATCATATACTG+GGG | + | chr1.2:71052657-71052676 | MS.gene60706:intron | 25.0% |
! | ATTCAATATGGAAAAGTTTC+GGG | - | chr1.2:71050633-71050652 | None:intergenic | 25.0% |
! | CAAATAAATAAATGAGCGTA+TGG | - | chr1.2:71052728-71052747 | None:intergenic | 25.0% |
! | CAGCGAATATTGAAAATTAT+TGG | - | chr1.2:71050055-71050074 | None:intergenic | 25.0% |
! | GAAAACGAGAATATTTCTTT+AGG | - | chr1.2:71052503-71052522 | None:intergenic | 25.0% |
! | GGTCCATTTCATTTAATATT+AGG | - | chr1.2:71053052-71053071 | None:intergenic | 25.0% |
! | TAACTGGTTATGTTAATTAC+TGG | + | chr1.2:71049883-71049902 | MS.gene60706:intron | 25.0% |
! | TCCATTGTTTGGATTTAAAT+AGG | - | chr1.2:71051589-71051608 | None:intergenic | 25.0% |
! | TCCTATTTAAATCCAAACAA+TGG | + | chr1.2:71051585-71051604 | MS.gene60706:intron | 25.0% |
! | TTGAAGAATATATCCATTGA+AGG | - | chr1.2:71050501-71050520 | None:intergenic | 25.0% |
! | TTGATATTGCAGAAGTTATA+TGG | - | chr1.2:71054136-71054155 | None:intergenic | 25.0% |
!! | ACAAATCAATTTTTGTTGGT+GGG | + | chr1.2:71050150-71050169 | MS.gene60706:intron | 25.0% |
!! | ACCAAGTTATTTAAAACTGA+AGG | + | chr1.2:71052603-71052622 | MS.gene60706:CDS | 25.0% |
!! | ATAATTTTCAATATTCGCTG+AGG | + | chr1.2:71050055-71050074 | MS.gene60706:intron | 25.0% |
!! | ATCTGAAGTAAAGTTTAAGT+AGG | - | chr1.2:71052252-71052271 | None:intergenic | 25.0% |
!! | GAACTTTTCTGTATTCAATT+AGG | + | chr1.2:71049983-71050002 | MS.gene60706:intron | 25.0% |
!! | GAAGACAAATCAATTTTTGT+TGG | + | chr1.2:71050146-71050165 | MS.gene60706:intron | 25.0% |
!! | GACTATAATTTTGAATGGTT+TGG | + | chr1.2:71053265-71053284 | MS.gene60706:CDS | 25.0% |
!! | TGATTGTCATTTATATTCTC+TGG | + | chr1.2:71055042-71055061 | MS.gene60706:intron | 25.0% |
!! | TGGTTGAATATTTAAAACAG+TGG | - | chr1.2:71054379-71054398 | None:intergenic | 25.0% |
!! | TTAGTTGTCATTTCATAGTA+CGG | + | chr1.2:71054815-71054834 | MS.gene60706:intron | 25.0% |
!!! | ATTAGGATTTTTGTTTGAAG+AGG | - | chr1.2:71053035-71053054 | None:intergenic | 25.0% |
!!! | TATAATTTTGAATGGTTTGG+AGG | + | chr1.2:71053268-71053287 | MS.gene60706:CDS | 25.0% |
!!! | TCAAGCGTTTTAACATTTAT+AGG | - | chr1.2:71053394-71053413 | None:intergenic | 25.0% |
!!! | TTATATGGTTTTGGATAAAG+AGG | - | chr1.2:71054121-71054140 | None:intergenic | 25.0% |
!!! | TTGCATATTTTTTTTTCGAG+AGG | + | chr1.2:71052094-71052113 | MS.gene60706:intron | 25.0% |
AAATAGGAGGATAACAAAAC+AGG | - | chr1.2:71053098-71053117 | None:intergenic | 30.0% | |
AAATGAAAATATCCACTAGC+TGG | - | chr1.2:71050663-71050682 | None:intergenic | 30.0% | |
AATGAAAATATCCACTAGCT+GGG | - | chr1.2:71050662-71050681 | None:intergenic | 30.0% | |
AATTCCTTTATATGACTCTG+CGG | + | chr1.2:71054272-71054291 | MS.gene60706:CDS | 30.0% | |
AATTGATTGATCGATGTTAC+CGG | - | chr1.2:71050296-71050315 | None:intergenic | 30.0% | |
ACAAGAAAATGGAATGTCAT+GGG | + | chr1.2:71053181-71053200 | MS.gene60706:CDS | 30.0% | |
ACATTAAAGATGAAAGAGAG+AGG | - | chr1.2:71050928-71050947 | None:intergenic | 30.0% | |
ACCTTGAGTTTCATAAGTAT+GGG | - | chr1.2:71052833-71052852 | None:intergenic | 30.0% | |
ACTTGTAGAACAAAATAACC+AGG | - | chr1.2:71052151-71052170 | None:intergenic | 30.0% | |
AGTAAAAACCATCATTCTCA+TGG | + | chr1.2:71051022-71051041 | MS.gene60706:intron | 30.0% | |
ATATTGCTATATGTGAATGC+AGG | + | chr1.2:71051809-71051828 | MS.gene60706:CDS | 30.0% | |
ATCTCTACCAAAAGATCAAA+GGG | + | chr1.2:71054555-71054574 | MS.gene60706:CDS | 30.0% | |
ATTCAACCACTGAATTCAAT+TGG | + | chr1.2:71054390-71054409 | MS.gene60706:CDS | 30.0% | |
CAAGATTTATAAACCATTCC+TGG | + | chr1.2:71053005-71053024 | MS.gene60706:CDS | 30.0% | |
CTTGTAGAACAAAATAACCA+GGG | - | chr1.2:71052150-71052169 | None:intergenic | 30.0% | |
GCTATAGATATCATTGCAAT+CGG | + | chr1.2:71052455-71052474 | MS.gene60706:intron | 30.0% | |
GCTTTCAATTATGTTACTAG+TGG | + | chr1.2:71054734-71054753 | MS.gene60706:intron | 30.0% | |
GTAAAAACCATCATTCTCAT+GGG | + | chr1.2:71051023-71051042 | MS.gene60706:intron | 30.0% | |
GTATTCAATTAGGCTTACTT+TGG | + | chr1.2:71049993-71050012 | MS.gene60706:intron | 30.0% | |
TAAACCAAAACTTACAAACC+AGG | - | chr1.2:71054222-71054241 | None:intergenic | 30.0% | |
TATATCCATTGAAGGAAGAT+TGG | - | chr1.2:71050493-71050512 | None:intergenic | 30.0% | |
TCATATTTCTTGTCATATCC+TGG | + | chr1.2:71054201-71054220 | MS.gene60706:intron | 30.0% | |
TCTATTGATGCAACTAGAAA+AGG | + | chr1.2:71052974-71052993 | MS.gene60706:CDS | 30.0% | |
TGCTATCTTCTACTTATGAT+TGG | + | chr1.2:71049805-71049824 | MS.gene60706:intron | 30.0% | |
TTCAACCACTGAATTCAATT+GGG | + | chr1.2:71054391-71054410 | MS.gene60706:CDS | 30.0% | |
TTCTAGTCAGTTAACTTAAC+TGG | + | chr1.2:71052337-71052356 | MS.gene60706:intron | 30.0% | |
TTTGTTTATTTCATACAGGC+AGG | + | chr1.2:71052748-71052767 | MS.gene60706:intron | 30.0% | |
! | AACTCACCTGATTTTTACAA+AGG | - | chr1.2:71051930-71051949 | None:intergenic | 30.0% |
! | AGTGCTTGTATTTGTTAGAT+AGG | + | chr1.2:71050855-71050874 | MS.gene60706:intron | 30.0% |
! | AGTTAAGCCTTTTAAATGCA+TGG | + | chr1.2:71053440-71053459 | MS.gene60706:intron | 30.0% |
! | ATTAGTTTCTCTCTTATGGT+AGG | + | chr1.2:71050016-71050035 | MS.gene60706:intron | 30.0% |
! | GACAAATCAATTTTTGTTGG+TGG | + | chr1.2:71050149-71050168 | MS.gene60706:intron | 30.0% |
! | GTTAAGCCTTTTAAATGCAT+GGG | + | chr1.2:71053441-71053460 | MS.gene60706:intron | 30.0% |
! | TAGTGCGATATTTGATTTCA+GGG | - | chr1.2:71051298-71051317 | None:intergenic | 30.0% |
! | TCTAGAGAGTTTACTCTTTT+AGG | - | chr1.2:71051204-71051223 | None:intergenic | 30.0% |
! | TTGCAGAAGTTATATGGTTT+TGG | - | chr1.2:71054130-71054149 | None:intergenic | 30.0% |
!! | AAACTTTTGTTTGCTTTTGC+AGG | + | chr1.2:71052911-71052930 | MS.gene60706:intron | 30.0% |
!! | ATATCCTGGTTTGTAAGTTT+TGG | + | chr1.2:71054215-71054234 | MS.gene60706:intron | 30.0% |
!! | ATTTTGACCTATGTCATACT+GGG | + | chr1.2:71050556-71050575 | MS.gene60706:intron | 30.0% |
!! | TTGGATTAGTTTCTCTCTTA+TGG | + | chr1.2:71050012-71050031 | MS.gene60706:intron | 30.0% |
!!! | GCCTTCAGTTTTAAATAACT+TGG | - | chr1.2:71052607-71052626 | None:intergenic | 30.0% |
!!! | TATTTTGACCTATGTCATAC+TGG | + | chr1.2:71050555-71050574 | MS.gene60706:intron | 30.0% |
AAACGACAATGAAGCATGTA+CGG | - | chr1.2:71055006-71055025 | None:intergenic | 35.0% | |
AAAGAGAGGGATAAGAGAAT+TGG | - | chr1.2:71050718-71050737 | None:intergenic | 35.0% | |
AAGAAAATGGAATGTCATGG+GGG | + | chr1.2:71053183-71053202 | MS.gene60706:CDS | 35.0% | |
AAGAGTTGGAATATTTGCAC+TGG | + | chr1.2:71053210-71053229 | MS.gene60706:CDS | 35.0% | |
AAGATCCTGTTTGGTATCTT+GGG | - | chr1.2:71054481-71054500 | None:intergenic | 35.0% | |
AATTGAGAAGAGAACCTACA+AGG | - | chr1.2:71050216-71050235 | None:intergenic | 35.0% | |
ACTAAAGATCCAGCATAAGT+GGG | - | chr1.2:71051069-71051088 | None:intergenic | 35.0% | |
ACTAATAGCTTGAAAGGTGA+TGG | + | chr1.2:71053504-71053523 | MS.gene60706:intron | 35.0% | |
AGCTTTCAGTATAATAGCCA+TGG | - | chr1.2:71054340-71054359 | None:intergenic | 35.0% | |
ATAATGATGAGATCCTAGCA+CGG | + | chr1.2:71053986-71054005 | MS.gene60706:intron | 35.0% | |
ATCACCTTTCAAGCTATTAG+TGG | - | chr1.2:71053505-71053524 | None:intergenic | 35.0% | |
ATCATATACTGGGGAAATTC+AGG | + | chr1.2:71052666-71052685 | MS.gene60706:intron | 35.0% | |
ATCATGCCCATGCATTTAAA+AGG | - | chr1.2:71053450-71053469 | None:intergenic | 35.0% | |
ATCGATCAATCAATTAACGG+CGG | + | chr1.2:71050301-71050320 | MS.gene60706:intron | 35.0% | |
ATGAGAACTGTCATGAATCA+CGG | + | chr1.2:71054965-71054984 | MS.gene60706:intron | 35.0% | |
ATTGAAGGAAGATTGGACAA+TGG | - | chr1.2:71050486-71050505 | None:intergenic | 35.0% | |
ATTGAGAAGAGAACCTACAA+GGG | - | chr1.2:71050215-71050234 | None:intergenic | 35.0% | |
ATTGATTGATCGATGTTACC+GGG | - | chr1.2:71050295-71050314 | None:intergenic | 35.0% | |
ATTGTCCAATCTTCCTTCAA+TGG | + | chr1.2:71050485-71050504 | MS.gene60706:intron | 35.0% | |
CAAACTGTGAGACAAGAAAA+TGG | + | chr1.2:71053170-71053189 | MS.gene60706:CDS | 35.0% | |
CAAGAAAATGGAATGTCATG+GGG | + | chr1.2:71053182-71053201 | MS.gene60706:CDS | 35.0% | |
CAGTTTGTCATTGAATACTG+TGG | + | chr1.2:71052772-71052791 | MS.gene60706:CDS | 35.0% | |
CATAATACAGAAGAGGAAGT+TGG | + | chr1.2:71051399-71051418 | MS.gene60706:intron | 35.0% | |
CATCTCTACCAAAAGATCAA+AGG | + | chr1.2:71054554-71054573 | MS.gene60706:CDS | 35.0% | |
CTGAATTCAATTGGGATCAA+TGG | + | chr1.2:71054399-71054418 | MS.gene60706:CDS | 35.0% | |
GAAAACTGAAATAGAAAGCG+AGG | + | chr1.2:71054440-71054459 | MS.gene60706:CDS | 35.0% | |
GAAAAGAAAAGATGACGCTA+CGG | + | chr1.2:71055100-71055119 | MS.gene60706:intron | 35.0% | |
GACAAGAAAATGGAATGTCA+TGG | + | chr1.2:71053180-71053199 | MS.gene60706:CDS | 35.0% | |
GACCTTGAGTTTCATAAGTA+TGG | - | chr1.2:71052834-71052853 | None:intergenic | 35.0% | |
GCTGGGAGATTAATTCAATA+TGG | - | chr1.2:71050645-71050664 | None:intergenic | 35.0% | |
GGTCTACAATACTTGCATAT+TGG | - | chr1.2:71053077-71053096 | None:intergenic | 35.0% | |
GTGCTGTATTCATCTCTAAA+AGG | + | chr1.2:71053893-71053912 | MS.gene60706:intron | 35.0% | |
GTTAACTTAACTGGCATAAC+TGG | + | chr1.2:71052346-71052365 | MS.gene60706:intron | 35.0% | |
TACAATACTTGCATATTGGC+AGG | - | chr1.2:71053073-71053092 | None:intergenic | 35.0% | |
TAGAAATTTCATCCGACTTC+TGG | + | chr1.2:71051220-71051239 | MS.gene60706:intron | 35.0% | |
TAGCAGTCTGTAGTTACAAT+TGG | + | chr1.2:71052399-71052418 | MS.gene60706:intron | 35.0% | |
TATTCCTATTGGAACTGAAC+TGG | + | chr1.2:71053237-71053256 | MS.gene60706:CDS | 35.0% | |
TATTTGTATTCTGCTTTCCC+TGG | + | chr1.2:71052130-71052149 | MS.gene60706:intron | 35.0% | |
TCACCTTTCAAGCTATTAGT+GGG | - | chr1.2:71053504-71053523 | None:intergenic | 35.0% | |
TCCCATACTTATGAAACTCA+AGG | + | chr1.2:71052829-71052848 | MS.gene60706:CDS | 35.0% | |
TCTCTACCAAAAGATCAAAG+GGG | + | chr1.2:71054556-71054575 | MS.gene60706:CDS | 35.0% | |
TGACTAAAAACTATCCCACA+AGG | - | chr1.2:71051246-71051265 | None:intergenic | 35.0% | |
TGAGGGATCTAAATTCCAAT+GGG | - | chr1.2:71051619-71051638 | None:intergenic | 35.0% | |
TGCTAGGATCTCATCATTAT+GGG | - | chr1.2:71053986-71054005 | None:intergenic | 35.0% | |
TGGACTAAAACTTAGTTACC+TGG | + | chr1.2:71054754-71054773 | MS.gene60706:intron | 35.0% | |
TGGCATCCTTTGTAAAAATC+AGG | + | chr1.2:71051921-71051940 | MS.gene60706:CDS | 35.0% | |
TGTACTCTTACAAAAGCAGA+GGG | - | chr1.2:71050905-71050924 | None:intergenic | 35.0% | |
TTATGAGTTCGTCAACAGAA+TGG | - | chr1.2:71051339-71051358 | None:intergenic | 35.0% | |
TTCTGTATTATGAAGCAGGA+AGG | - | chr1.2:71051391-71051410 | None:intergenic | 35.0% | |
TTGAAGGAAGATTGGACAAT+GGG | - | chr1.2:71050485-71050504 | None:intergenic | 35.0% | |
TTGATCCCAATTGAATTCAG+TGG | - | chr1.2:71054399-71054418 | None:intergenic | 35.0% | |
TTTGGCTGATGAGGAAATTA+AGG | + | chr1.2:71052641-71052660 | MS.gene60706:CDS | 35.0% | |
TTTGTTTGAAGAGGTTTACC+AGG | - | chr1.2:71053026-71053045 | None:intergenic | 35.0% | |
! | AACTTTTCTCCTAAGTAGTG+CGG | + | chr1.2:71052433-71052452 | MS.gene60706:intron | 35.0% |
! | AATGAAGCTTTTGACGTTCT+CGG | + | chr1.2:71055349-71055368 | MS.gene60706:CDS | 35.0% |
! | ATTCAGTTGATGTCAAACCT+TGG | - | chr1.2:71053129-71053148 | None:intergenic | 35.0% |
! | CATTTTCTTGTCTCACAGTT+TGG | - | chr1.2:71053172-71053191 | None:intergenic | 35.0% |
! | CTAGTGCGATATTTGATTTC+AGG | - | chr1.2:71051299-71051318 | None:intergenic | 35.0% |
! | CTCAAATGTTCTGAATTCCT+TGG | + | chr1.2:71053319-71053338 | MS.gene60706:CDS | 35.0% |
! | CTTTGATCTTTTGGTAGAGA+TGG | - | chr1.2:71054556-71054575 | None:intergenic | 35.0% |
! | CTTTTAGGCGAATAGCAAAA+AGG | - | chr1.2:71051189-71051208 | None:intergenic | 35.0% |
! | GATATTTGATTTCAGGGCAT+TGG | - | chr1.2:71051292-71051311 | None:intergenic | 35.0% |
! | GGAGGAGATTTTAGATTATG+AGG | + | chr1.2:71054656-71054675 | MS.gene60706:CDS | 35.0% |
! | GTCATCTTTTCTTTTCTGCA+TGG | - | chr1.2:71055096-71055115 | None:intergenic | 35.0% |
! | TAGTGGGTCTTAAAAACTCA+TGG | - | chr1.2:71053488-71053507 | None:intergenic | 35.0% |
! | TATTTAAAACTGAAGGCCGA+GGG | + | chr1.2:71052610-71052629 | MS.gene60706:CDS | 35.0% |
! | TCGTTTTATCTGTTACTGAC+TGG | + | chr1.2:71053922-71053941 | MS.gene60706:intron | 35.0% |
! | TTATTTAAAACTGAAGGCCG+AGG | + | chr1.2:71052609-71052628 | MS.gene60706:CDS | 35.0% |
! | TTCAGTTGATGTCAAACCTT+GGG | - | chr1.2:71053128-71053147 | None:intergenic | 35.0% |
! | TTCCTCGTGTTTGGAATAAT+CGG | + | chr1.2:71053806-71053825 | MS.gene60706:intron | 35.0% |
! | TTTTACAAAGGATGCCACAA+GGG | - | chr1.2:71051918-71051937 | None:intergenic | 35.0% |
! | TTTTTACAAAGGATGCCACA+AGG | - | chr1.2:71051919-71051938 | None:intergenic | 35.0% |
!! | TTTTTAGTCAGTGGGATAGA+AGG | + | chr1.2:71051256-71051275 | MS.gene60706:intron | 35.0% |
!!! | AAAATATTTTGGTTGCGAGG+CGG | - | chr1.2:71050793-71050812 | None:intergenic | 35.0% |
!!! | ATGGTTTTGGATAAAGAGGA+AGG | - | chr1.2:71054117-71054136 | None:intergenic | 35.0% |
!!! | CTCAAAATATTTTGGTTGCG+AGG | - | chr1.2:71050796-71050815 | None:intergenic | 35.0% |
!!! | GACTTTTTTATCTGCGTATG+AGG | + | chr1.2:71050102-71050121 | MS.gene60706:intron | 35.0% |
!!! | TGGGATAGTTTTTAGTCAGT+GGG | + | chr1.2:71051248-71051267 | MS.gene60706:intron | 35.0% |
AAATAGAAAGCGAGGACATG+AGG | + | chr1.2:71054448-71054467 | MS.gene60706:CDS | 40.0% | |
AAATCAGGTGAGTTCGTGTT+TGG | + | chr1.2:71051936-71051955 | MS.gene60706:intron | 40.0% | |
AATCAGGTGAGTTCGTGTTT+GGG | + | chr1.2:71051937-71051956 | MS.gene60706:intron | 40.0% | |
AATTCAAAGGCTATGGCCTA+TGG | + | chr1.2:71051653-71051672 | MS.gene60706:intron | 40.0% | |
ACTGAAAGCTGAAGAACCAT+CGG | + | chr1.2:71054350-71054369 | MS.gene60706:CDS | 40.0% | |
ACTTCTCTTTATCTCTGTGC+AGG | + | chr1.2:71051764-71051783 | MS.gene60706:intron | 40.0% | |
ACTTTGTAAAGCTGTCCTGA+CGG | - | chr1.2:71051005-71051024 | None:intergenic | 40.0% | |
AGACCCACTAATAGCTTGAA+AGG | + | chr1.2:71053498-71053517 | MS.gene60706:intron | 40.0% | |
AGCACTGCGCAAGATTAATT+TGG | - | chr1.2:71050841-71050860 | None:intergenic | 40.0% | |
AGCCTTTGAATTGGTGGAAT+TGG | - | chr1.2:71051645-71051664 | None:intergenic | 40.0% | |
ATAGGCCATAGCCTTTGAAT+TGG | - | chr1.2:71051654-71051673 | None:intergenic | 40.0% | |
ATCCTTCTCGTGTTCTTCAA+TGG | - | chr1.2:71055162-71055181 | None:intergenic | 40.0% | |
ATCTCATCATTATGGGGTCT+TGG | - | chr1.2:71053979-71053998 | None:intergenic | 40.0% | |
ATTAGCTACGCGATTCTTAC+CGG | - | chr1.2:71050532-71050551 | None:intergenic | 40.0% | |
ATTGATGCAAAGTATGCAGC+TGG | + | chr1.2:71054609-71054628 | MS.gene60706:CDS | 40.0% | |
ATTTCTGCAAGCATGAGACA+TGG | - | chr1.2:71052560-71052579 | None:intergenic | 40.0% | |
CAACCTTGTACCCTTTGATT+TGG | + | chr1.2:71051503-71051522 | MS.gene60706:intron | 40.0% | |
CACCAATTCCACCAATTCAA+AGG | + | chr1.2:71051640-71051659 | MS.gene60706:intron | 40.0% | |
CACTAAAGATCCAGCATAAG+TGG | - | chr1.2:71051070-71051089 | None:intergenic | 40.0% | |
CACTCGATTGACATAAAGGA+AGG | - | chr1.2:71050329-71050348 | None:intergenic | 40.0% | |
CATATACAAACTCTACCAGC+CGG | + | chr1.2:71050585-71050604 | MS.gene60706:intron | 40.0% | |
CCTCTTCTGTATTATGAAGC+AGG | - | chr1.2:71051395-71051414 | None:intergenic | 40.0% | |
CCTGCTGGTAGTTAAAAAGT+TGG | + | chr1.2:71052003-71052022 | MS.gene60706:intron | 40.0% | |
CCTGCTTCATAATACAGAAG+AGG | + | chr1.2:71051392-71051411 | MS.gene60706:intron | 40.0% | |
CTAAAGATCCAGCATAAGTG+GGG | - | chr1.2:71051068-71051087 | None:intergenic | 40.0% | |
CTCTACCAAAAGATCAAAGG+GGG | + | chr1.2:71054557-71054576 | MS.gene60706:CDS | 40.0% | |
CTTTGAATTGGTGGAATTGG+TGG | - | chr1.2:71051642-71051661 | None:intergenic | 40.0% | |
GAAGATCCTGTTTGGTATCT+TGG | - | chr1.2:71054482-71054501 | None:intergenic | 40.0% | |
GAATGGAATTGGAAGTGAAG+TGG | - | chr1.2:71051322-71051341 | None:intergenic | 40.0% | |
GATGAACTCACGTCAAATGT+TGG | + | chr1.2:71054297-71054316 | MS.gene60706:CDS | 40.0% | |
GCACTGGAAGATATTCCTAT+TGG | + | chr1.2:71053226-71053245 | MS.gene60706:CDS | 40.0% | |
GCAGGAGGATACTTATCTAT+GGG | + | chr1.2:71053830-71053849 | MS.gene60706:intron | 40.0% | |
GCTAGGATCTCATCATTATG+GGG | - | chr1.2:71053985-71054004 | None:intergenic | 40.0% | |
GCTGGTAGAGTTTGTATATG+TGG | - | chr1.2:71050585-71050604 | None:intergenic | 40.0% | |
GGGAAATTCAGGCCTTAATA+TGG | + | chr1.2:71052677-71052696 | MS.gene60706:intron | 40.0% | |
GTGAGGGATCTAAATTCCAA+TGG | - | chr1.2:71051620-71051639 | None:intergenic | 40.0% | |
GTGCTAGGATCTCATCATTA+TGG | - | chr1.2:71053987-71054006 | None:intergenic | 40.0% | |
GTGCTTCCTTTGATGCTAAA+AGG | - | chr1.2:71054635-71054654 | None:intergenic | 40.0% | |
GTGTACTCTTACAAAAGCAG+AGG | - | chr1.2:71050906-71050925 | None:intergenic | 40.0% | |
GTTCGTCAACAGAATGGAAT+TGG | - | chr1.2:71051333-71051352 | None:intergenic | 40.0% | |
TATCTATAGCCGCACTACTT+AGG | - | chr1.2:71052445-71052464 | None:intergenic | 40.0% | |
TATGCCAGTTCAGTTCCAAT+AGG | - | chr1.2:71053244-71053263 | None:intergenic | 40.0% | |
TCAATTGGGATCAATGGCTT+AGG | + | chr1.2:71054405-71054424 | MS.gene60706:CDS | 40.0% | |
TCGATTGAGACAGAGAGTAA+AGG | + | chr1.2:71050372-71050391 | MS.gene60706:intron | 40.0% | |
TCTACCAAAAGATCAAAGGG+GGG | + | chr1.2:71054558-71054577 | MS.gene60706:CDS | 40.0% | |
TGAAGGAAGATTGGACAATG+GGG | - | chr1.2:71050484-71050503 | None:intergenic | 40.0% | |
TGAATTAATCTCCCAGCTAG+TGG | + | chr1.2:71050648-71050667 | MS.gene60706:intron | 40.0% | |
TGACAGATGATGTGTGCATT+TGG | - | chr1.2:71054894-71054913 | None:intergenic | 40.0% | |
TGTCGTAGATACACTGTCTT+GGG | - | chr1.2:71055186-71055205 | None:intergenic | 40.0% | |
TTCCACCAATTCAAAGGCTA+TGG | + | chr1.2:71051646-71051665 | MS.gene60706:intron | 40.0% | |
TTCCTACCCTCCAAATCAAA+GGG | - | chr1.2:71051516-71051535 | None:intergenic | 40.0% | |
TTGAAGAGGTTTACCAGGAA+TGG | - | chr1.2:71053021-71053040 | None:intergenic | 40.0% | |
TTTCCTACCCTCCAAATCAA+AGG | - | chr1.2:71051517-71051536 | None:intergenic | 40.0% | |
! | ACTAGATAACTTGTGACAGC+GGG | - | chr1.2:71051367-71051386 | None:intergenic | 40.0% |
! | ATGTTGCTTGTACTCCTCAA+AGG | + | chr1.2:71055282-71055301 | MS.gene60706:CDS | 40.0% |
! | CAAATCAAAGGGTACAAGGT+TGG | - | chr1.2:71051505-71051524 | None:intergenic | 40.0% |
! | CACTAGATAACTTGTGACAG+CGG | - | chr1.2:71051368-71051387 | None:intergenic | 40.0% |
! | CATTCGATTTTCCATTCCTC+TGG | - | chr1.2:71051692-71051711 | None:intergenic | 40.0% |
! | TATGGGAAGATGATGATGAC+AGG | + | chr1.2:71053847-71053866 | MS.gene60706:CDS | 40.0% |
! | TGTCATTTCATAGTACGGTC+TGG | + | chr1.2:71054820-71054839 | MS.gene60706:intron | 40.0% |
! | TGTTGCTTGTACTCCTCAAA+GGG | + | chr1.2:71055283-71055302 | MS.gene60706:CDS | 40.0% |
! | TTTAAAACAGTGGACTCCGA+TGG | - | chr1.2:71054369-71054388 | None:intergenic | 40.0% |
! | TTTAGCATCAAAGGAAGCAC+AGG | + | chr1.2:71054635-71054654 | MS.gene60706:CDS | 40.0% |
!! | CCAACTTTTTAACTACCAGC+AGG | - | chr1.2:71052006-71052025 | None:intergenic | 40.0% |
!! | CTTGTACCCTTTGATTTGGA+GGG | + | chr1.2:71051507-71051526 | MS.gene60706:intron | 40.0% |
!! | CTTTTTAACTACCAGCAGGA+TGG | - | chr1.2:71052002-71052021 | None:intergenic | 40.0% |
!! | GTTTGCTTTTGCAGGTCTTA+AGG | + | chr1.2:71052919-71052938 | MS.gene60706:intron | 40.0% |
!! | TTTGATTTGGAGGGTAGGAA+AGG | + | chr1.2:71051516-71051535 | MS.gene60706:intron | 40.0% |
!! | TTTTTGGGGAAGATCCTGTT+TGG | - | chr1.2:71054490-71054509 | None:intergenic | 40.0% |
!!! | CGCGATATCGCATTTTTTTG+GGG | - | chr1.2:71054504-71054523 | None:intergenic | 40.0% |
!!! | GCGCGATATCGCATTTTTTT+GGG | - | chr1.2:71054505-71054524 | None:intergenic | 40.0% |
!!! | GTGGGATAGTTTTTAGTCAG+TGG | + | chr1.2:71051247-71051266 | MS.gene60706:intron | 40.0% |
!!! | TGCGCGATATCGCATTTTTT+TGG | - | chr1.2:71054506-71054525 | None:intergenic | 40.0% |
AAATTGATATATCCGCCGGC+TGG | - | chr1.2:71050603-71050622 | None:intergenic | 45.0% | |
ACAATGGAATACCAGCCCAT+TGG | + | chr1.2:71051601-71051620 | MS.gene60706:intron | 45.0% | |
ACCACTGAATCCCTTGCTTT+CGG | - | chr1.2:71050176-71050195 | None:intergenic | 45.0% | |
AGGTGGAGTGTGGAGTATAA+TGG | + | chr1.2:71051536-71051555 | MS.gene60706:intron | 45.0% | |
AGTAGCAGAGAAGTGGATAC+AGG | + | chr1.2:71055205-71055224 | MS.gene60706:CDS | 45.0% | |
ATAAGTATGGGATCTGCGCT+TGG | - | chr1.2:71052821-71052840 | None:intergenic | 45.0% | |
ATCATTATGGGGTCTTGGAG+TGG | - | chr1.2:71053974-71053993 | None:intergenic | 45.0% | |
ATTCGAAGTAACACTGCAGG+AGG | + | chr1.2:71054525-71054544 | MS.gene60706:CDS | 45.0% | |
ATTTAGACACCCATCTCCAC+AGG | - | chr1.2:71051860-71051879 | None:intergenic | 45.0% | |
CACTCGGTAGCATTACTAAC+TGG | + | chr1.2:71049867-71049886 | MS.gene60706:intron | 45.0% | |
CAGGCACTCGATTGACATAA+AGG | - | chr1.2:71050333-71050352 | None:intergenic | 45.0% | |
CGCAGGAGGATACTTATCTA+TGG | + | chr1.2:71053829-71053848 | MS.gene60706:intron | 45.0% | |
CTACTCTTCTTCCTCGTGTT+TGG | + | chr1.2:71053797-71053816 | MS.gene60706:intron | 45.0% | |
CTGTCGTAGATACACTGTCT+TGG | - | chr1.2:71055187-71055206 | None:intergenic | 45.0% | |
GAAAATTATTGGACCGGACC+TGG | - | chr1.2:71050044-71050063 | None:intergenic | 45.0% | |
GAACTCACGTCAAATGTTGG+TGG | + | chr1.2:71054300-71054319 | MS.gene60706:CDS | 45.0% | |
GCTTTAACCTGTGTCTCTGA+AGG | + | chr1.2:71052055-71052074 | MS.gene60706:intron | 45.0% | |
GGATCTAAATTCCAATGGGC+TGG | - | chr1.2:71051615-71051634 | None:intergenic | 45.0% | |
GGGATCTTTACCTAACGATG+CGG | - | chr1.2:71050464-71050483 | None:intergenic | 45.0% | |
GTACTCCCAAGATACCAAAC+AGG | + | chr1.2:71054473-71054492 | MS.gene60706:CDS | 45.0% | |
GTCATGGGGGAAATAAGAGT+TGG | + | chr1.2:71053196-71053215 | MS.gene60706:CDS | 45.0% | |
TCATTATGGGGTCTTGGAGT+GGG | - | chr1.2:71053973-71053992 | None:intergenic | 45.0% | |
TCCTCCGCAGAGTCATATAA+AGG | - | chr1.2:71054279-71054298 | None:intergenic | 45.0% | |
TCCTTTATATGACTCTGCGG+AGG | + | chr1.2:71054275-71054294 | MS.gene60706:CDS | 45.0% | |
TCTCTCTTATGGTAGGTTCC+AGG | + | chr1.2:71050023-71050042 | MS.gene60706:intron | 45.0% | |
TGCATAGCCCATGAGAATGA+TGG | - | chr1.2:71051033-71051052 | None:intergenic | 45.0% | |
TGCCATTGAAGAACACGAGA+AGG | + | chr1.2:71055157-71055176 | MS.gene60706:CDS | 45.0% | |
TGGACAGAGTGAACAATCCA+TGG | + | chr1.2:71054320-71054339 | MS.gene60706:CDS | 45.0% | |
TTAGTCAGTGGGATAGAAGG+TGG | + | chr1.2:71051259-71051278 | MS.gene60706:intron | 45.0% | |
TTCCTGCCTAAAACTCAAGG+CGG | + | chr1.2:71055229-71055248 | MS.gene60706:CDS | 45.0% | |
TTCCTTGGAGCAAAATCTCG+TGG | + | chr1.2:71053334-71053353 | MS.gene60706:CDS | 45.0% | |
TTCTCGTGTTCTTCAATGGC+AGG | - | chr1.2:71055158-71055177 | None:intergenic | 45.0% | |
! | AACCACGAGATTTTGCTCCA+AGG | - | chr1.2:71053339-71053358 | None:intergenic | 45.0% |
! | AGTTGATGTCAAACCTTGGG+CGG | - | chr1.2:71053125-71053144 | None:intergenic | 45.0% |
! | CAAACTCCGCCTTGAGTTTT+AGG | - | chr1.2:71055238-71055257 | None:intergenic | 45.0% |
! | CCTCCAAATCAAAGGGTACA+AGG | - | chr1.2:71051509-71051528 | None:intergenic | 45.0% |
! | CGACTTCAGTACCTTTTGCT+TGG | - | chr1.2:71055316-71055335 | None:intergenic | 45.0% |
! | CTTTCCCCCCTTTGATCTTT+TGG | - | chr1.2:71054565-71054584 | None:intergenic | 45.0% |
! | GATTCAGTGGTCTTACCCTT+GGG | + | chr1.2:71050185-71050204 | MS.gene60706:intron | 45.0% |
! | GCTAGTTCTTCTCCCAATCT+CGG | - | chr1.2:71050422-71050441 | None:intergenic | 45.0% |
! | TAGCTTGAAAGGTGATGGCT+AGG | + | chr1.2:71053509-71053528 | MS.gene60706:intron | 45.0% |
! | TGAATGGTTTGGAGGTGCAA+AGG | + | chr1.2:71053276-71053295 | MS.gene60706:CDS | 45.0% |
! | TTCAGTACCTTTTGCTTGGC+CGG | - | chr1.2:71055312-71055331 | None:intergenic | 45.0% |
!! | AATTGGTGGAATTGGTGGTG+AGG | - | chr1.2:71051637-71051656 | None:intergenic | 45.0% |
!! | ATTGGTGGAATTGGTGGTGA+GGG | - | chr1.2:71051636-71051655 | None:intergenic | 45.0% |
!! | CCTTGTACCCTTTGATTTGG+AGG | + | chr1.2:71051506-71051525 | MS.gene60706:intron | 45.0% |
!! | TACCCTTTGATTTGGAGGGT+AGG | + | chr1.2:71051511-71051530 | MS.gene60706:intron | 45.0% |
!! | TGGGCTGGTATTCCATTGTT+TGG | - | chr1.2:71051600-71051619 | None:intergenic | 45.0% |
!!! | AGCTGGCCTTTTAGCATCAA+AGG | + | chr1.2:71054626-71054645 | MS.gene60706:CDS | 45.0% |
!! | TAAATTATTAAAATAATCTT+TGG | - | chr1.2:71054798-71054817 | None:intergenic | 5.0% |
AAACGGCTGAGTCCGAGATT+GGG | + | chr1.2:71050407-71050426 | MS.gene60706:intron | 50.0% | |
AACATTTGAGCGCACCACAG+AGG | - | chr1.2:71053309-71053328 | None:intergenic | 50.0% | |
ACAAGTGCCTTCAGAGACAC+AGG | - | chr1.2:71052065-71052084 | None:intergenic | 50.0% | |
ACTCTCTGTCTCAATCGAGC+CGG | - | chr1.2:71050370-71050389 | None:intergenic | 50.0% | |
AGAAGAGAACCTACAAGGGC+CGG | - | chr1.2:71050211-71050230 | None:intergenic | 50.0% | |
AGGCTATGGCCTATGGTACA+AGG | + | chr1.2:71051660-71051679 | MS.gene60706:intron | 50.0% | |
ATACAAACTCTACCAGCCGG+CGG | + | chr1.2:71050588-71050607 | MS.gene60706:intron | 50.0% | |
ATACTCTTGCGAAGACCGTC+AGG | + | chr1.2:71050987-71051006 | MS.gene60706:intron | 50.0% | |
ATGCCACAAGGGCAAAATCC+AGG | - | chr1.2:71051907-71051926 | None:intergenic | 50.0% | |
CAAGCACAAGTTTCCGTGCT+AGG | - | chr1.2:71054002-71054021 | None:intergenic | 50.0% | |
CAGGCATAAGAAGCAGAAGG+AGG | + | chr1.2:71051783-71051802 | MS.gene60706:intron | 50.0% | |
CATTATGGGGTCTTGGAGTG+GGG | - | chr1.2:71053972-71053991 | None:intergenic | 50.0% | |
CGCATTCGAAGTAACACTGC+AGG | + | chr1.2:71054522-71054541 | MS.gene60706:CDS | 50.0% | |
CTAACGATGCGGAGCGAATT+CGG | - | chr1.2:71050453-71050472 | None:intergenic | 50.0% | |
CTACGACAGTAGCAGAGAAG+TGG | + | chr1.2:71055198-71055217 | MS.gene60706:CDS | 50.0% | |
CTTATGGTAGGTTCCAGGTC+CGG | + | chr1.2:71050028-71050047 | MS.gene60706:intron | 50.0% | |
GATTTGGAGGGTAGGAAAGG+TGG | + | chr1.2:71051519-71051538 | MS.gene60706:intron | 50.0% | |
GCATAAGAAGCAGAAGGAGG+AGG | + | chr1.2:71051786-71051805 | MS.gene60706:CDS | 50.0% | |
GCATTTCACCCCACTTATGC+TGG | + | chr1.2:71051057-71051076 | MS.gene60706:intron | 50.0% | |
GCCTGACTTCTCTATCTGAC+CGG | + | chr1.2:71050348-71050367 | MS.gene60706:intron | 50.0% | |
GGCCATAGCCTTTGAATTGG+TGG | - | chr1.2:71051651-71051670 | None:intergenic | 50.0% | |
GGCTTCCTGCCTAAAACTCA+AGG | + | chr1.2:71055226-71055245 | MS.gene60706:CDS | 50.0% | |
GTGCAGGCATAAGAAGCAGA+AGG | + | chr1.2:71051780-71051799 | MS.gene60706:intron | 50.0% | |
TAAAACTGAAGGCCGAGGGT+GGG | + | chr1.2:71052614-71052633 | MS.gene60706:CDS | 50.0% | |
TAAACGGCTGAGTCCGAGAT+TGG | + | chr1.2:71050406-71050425 | MS.gene60706:intron | 50.0% | |
TATCCCACAAGGCCAGAAGT+CGG | - | chr1.2:71051235-71051254 | None:intergenic | 50.0% | |
TCGCACTATAACCATCCTGC+TGG | + | chr1.2:71051988-71052007 | MS.gene60706:intron | 50.0% | |
TGCCACAAGGGCAAAATCCA+GGG | - | chr1.2:71051906-71051925 | None:intergenic | 50.0% | |
TTAAAACTGAAGGCCGAGGG+TGG | + | chr1.2:71052613-71052632 | MS.gene60706:CDS | 50.0% | |
! | AAAGGCGCGAATCGGCTAAA+CGG | + | chr1.2:71050390-71050409 | MS.gene60706:intron | 50.0% |
! | AGATAACTTGTGACAGCGGG+AGG | - | chr1.2:71051364-71051383 | None:intergenic | 50.0% |
! | AGCATCAAAGGAAGCACAGG+AGG | + | chr1.2:71054638-71054657 | MS.gene60706:CDS | 50.0% |
! | CAGAGAGTAAAGGCGCGAAT+CGG | + | chr1.2:71050382-71050401 | MS.gene60706:intron | 50.0% |
! | CGCCGATTATTCCAAACACG+AGG | - | chr1.2:71053811-71053830 | None:intergenic | 50.0% |
! | GATTTTCCATTCCTCTGGCC+TGG | - | chr1.2:71051687-71051706 | None:intergenic | 50.0% |
! | GGATTCAGTGGTCTTACCCT+TGG | + | chr1.2:71050184-71050203 | MS.gene60706:intron | 50.0% |
! | GTGTTTGGAATAATCGGCGC+AGG | + | chr1.2:71053812-71053831 | MS.gene60706:intron | 50.0% |
! | TCAGTACCTTTTGCTTGGCC+GGG | - | chr1.2:71055311-71055330 | None:intergenic | 50.0% |
! | TTTGGAATAATCGGCGCAGG+AGG | + | chr1.2:71053815-71053834 | MS.gene60706:intron | 50.0% |
!!! | ATTTTGGTTGCGAGGCGGAA+GGG | - | chr1.2:71050788-71050807 | None:intergenic | 50.0% |
!!! | TATTTTGGTTGCGAGGCGGA+AGG | - | chr1.2:71050789-71050808 | None:intergenic | 50.0% |
AAAACTGAAGGCCGAGGGTG+GGG | + | chr1.2:71052615-71052634 | MS.gene60706:CDS | 55.0% | |
AACCTTGGGCGGTGGGAAAT+AGG | - | chr1.2:71053114-71053133 | None:intergenic | 55.0% | |
AGGGTAGGAAAGGTGGAGTG+TGG | + | chr1.2:71051526-71051545 | MS.gene60706:intron | 55.0% | |
CGAATTCGCTCCGCATCGTT+AGG | + | chr1.2:71050451-71050470 | MS.gene60706:intron | 55.0% | |
CTGACAGTGCCTGTGGAGAT+GGG | + | chr1.2:71051848-71051867 | MS.gene60706:CDS | 55.0% | |
GATGATCCTGACAGTGCCTG+TGG | + | chr1.2:71051841-71051860 | MS.gene60706:CDS | 55.0% | |
GATGTCAAACCTTGGGCGGT+GGG | - | chr1.2:71053121-71053140 | None:intergenic | 55.0% | |
GCCACAAGGGCAAAATCCAG+GGG | - | chr1.2:71051905-71051924 | None:intergenic | 55.0% | |
GCCGAAAGCAAGGGATTCAG+TGG | + | chr1.2:71050172-71050191 | MS.gene60706:intron | 55.0% | |
GCCGGTCAGATAGAGAAGTC+AGG | - | chr1.2:71050352-71050371 | None:intergenic | 55.0% | |
GTGGTCGCCCAGTATGACAT+AGG | - | chr1.2:71050566-71050585 | None:intergenic | 55.0% | |
TGATGTCAAACCTTGGGCGG+TGG | - | chr1.2:71053122-71053141 | None:intergenic | 55.0% | |
TGGCCTATGGTACAAGGACC+AGG | + | chr1.2:71051666-71051685 | MS.gene60706:intron | 55.0% | |
TGGCCTGGTCCTTGTACCAT+AGG | - | chr1.2:71051672-71051691 | None:intergenic | 55.0% | |
! | ACCCCTGGATTTTGCCCTTG+TGG | + | chr1.2:71051901-71051920 | MS.gene60706:CDS | 55.0% |
! | CTGTCTCTGTTGCTGCTTCC+CGG | + | chr1.2:71050274-71050293 | MS.gene60706:intron | 55.0% |
! | TGTTGGTGGGCCGAAAGCAA+GGG | + | chr1.2:71050163-71050182 | MS.gene60706:intron | 55.0% |
! | TTGTTGGTGGGCCGAAAGCA+AGG | + | chr1.2:71050162-71050181 | MS.gene60706:intron | 55.0% |
!! | CATCCGACTTCTGGCCTTGT+GGG | + | chr1.2:71051229-71051248 | MS.gene60706:intron | 55.0% |
!! | GTGGGGTCTTTTGGCTGATG+AGG | + | chr1.2:71052632-71052651 | MS.gene60706:CDS | 55.0% |
!! | TCATCCGACTTCTGGCCTTG+TGG | + | chr1.2:71051228-71051247 | MS.gene60706:intron | 55.0% |
!! | TGTACTCCTCAAAGGGCACC+CGG | + | chr1.2:71055290-71055309 | MS.gene60706:CDS | 55.0% |
!!! | CTCCGCCTTGAGTTTTAGGC+AGG | - | chr1.2:71055234-71055253 | None:intergenic | 55.0% |
ATGGGGTCTTGGAGTGGGGA+AGG | - | chr1.2:71053968-71053987 | None:intergenic | 60.0% | |
CAAGGACCAGGCCAGAGGAA+TGG | + | chr1.2:71051678-71051697 | MS.gene60706:intron | 60.0% | |
CAGCCAAAAGACCCCACCCT+CGG | - | chr1.2:71052629-71052648 | None:intergenic | 60.0% | |
CCTGACAGTGCCTGTGGAGA+TGG | + | chr1.2:71051847-71051866 | MS.gene60706:CDS | 60.0% | |
CTCCTATTTCCCACCGCCCA+AGG | + | chr1.2:71053109-71053128 | MS.gene60706:intron | 60.0% | |
CTTGGGCGGTGGGAAATAGG+AGG | - | chr1.2:71053111-71053130 | None:intergenic | 60.0% | |
GCAAAGGTTCGCTGCCTCTG+TGG | + | chr1.2:71053292-71053311 | MS.gene60706:CDS | 60.0% | |
TGGTACAAGGACCAGGCCAG+AGG | + | chr1.2:71051673-71051692 | MS.gene60706:intron | 60.0% | |
! | ACCAGCACTGAATGCACCCC+TGG | + | chr1.2:71051886-71051905 | MS.gene60706:CDS | 60.0% |
! | CAGTGGTCTTACCCTTGGGC+CGG | + | chr1.2:71050189-71050208 | MS.gene60706:intron | 60.0% |
! | CCATCTCCACAGGCACTGTC+AGG | - | chr1.2:71051850-71051869 | None:intergenic | 60.0% |
! | TCCAGGGGTGCATTCAGTGC+TGG | - | chr1.2:71051890-71051909 | None:intergenic | 60.0% |
AACCTACAAGGGCCGGCCCA+AGG | - | chr1.2:71050204-71050223 | None:intergenic | 65.0% | |
ACCTACAAGGGCCGGCCCAA+GGG | - | chr1.2:71050203-71050222 | None:intergenic | 65.0% | |
! | AGGCCGAGGGTGGGGTCTTT+TGG | + | chr1.2:71052623-71052642 | MS.gene60706:CDS | 65.0% |
! | AGGGCACCCGGCCAAGCAAA+AGG | + | chr1.2:71055302-71055321 | MS.gene60706:CDS | 65.0% |
ACCCTTGGGCCGGCCCTTGT+AGG | + | chr1.2:71050199-71050218 | MS.gene60706:intron | 70.0% | |
GCTTGGCCGGGTGCCCTTTG+AGG | - | chr1.2:71055299-71055318 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 71049742 | 71055388 | 71049742 | ID=MS.gene60706 |
chr1.2 | mRNA | 71049742 | 71055388 | 71049742 | ID=MS.gene60706.t1;Parent=MS.gene60706 |
chr1.2 | exon | 71049742 | 71049749 | 71049742 | ID=MS.gene60706.t1.exon1;Parent=MS.gene60706.t1 |
chr1.2 | CDS | 71049742 | 71049749 | 71049742 | ID=cds.MS.gene60706.t1;Parent=MS.gene60706.t1 |
chr1.2 | exon | 71051786 | 71051942 | 71051786 | ID=MS.gene60706.t1.exon2;Parent=MS.gene60706.t1 |
chr1.2 | CDS | 71051786 | 71051942 | 71051786 | ID=cds.MS.gene60706.t1;Parent=MS.gene60706.t1 |
chr1.2 | exon | 71052576 | 71052662 | 71052576 | ID=MS.gene60706.t1.exon3;Parent=MS.gene60706.t1 |
chr1.2 | CDS | 71052576 | 71052662 | 71052576 | ID=cds.MS.gene60706.t1;Parent=MS.gene60706.t1 |
chr1.2 | exon | 71052766 | 71052850 | 71052766 | ID=MS.gene60706.t1.exon4;Parent=MS.gene60706.t1 |
chr1.2 | CDS | 71052766 | 71052850 | 71052766 | ID=cds.MS.gene60706.t1;Parent=MS.gene60706.t1 |
chr1.2 | exon | 71052933 | 71053026 | 71052933 | ID=MS.gene60706.t1.exon5;Parent=MS.gene60706.t1 |
chr1.2 | CDS | 71052933 | 71053026 | 71052933 | ID=cds.MS.gene60706.t1;Parent=MS.gene60706.t1 |
chr1.2 | exon | 71053165 | 71053363 | 71053165 | ID=MS.gene60706.t1.exon6;Parent=MS.gene60706.t1 |
chr1.2 | CDS | 71053165 | 71053363 | 71053165 | ID=cds.MS.gene60706.t1;Parent=MS.gene60706.t1 |
chr1.2 | exon | 71053834 | 71053868 | 71053834 | ID=MS.gene60706.t1.exon7;Parent=MS.gene60706.t1 |
chr1.2 | CDS | 71053834 | 71053868 | 71053834 | ID=cds.MS.gene60706.t1;Parent=MS.gene60706.t1 |
chr1.2 | exon | 71054257 | 71054677 | 71054257 | ID=MS.gene60706.t1.exon8;Parent=MS.gene60706.t1 |
chr1.2 | CDS | 71054257 | 71054677 | 71054257 | ID=cds.MS.gene60706.t1;Parent=MS.gene60706.t1 |
chr1.2 | exon | 71055101 | 71055388 | 71055101 | ID=MS.gene60706.t1.exon9;Parent=MS.gene60706.t1 |
chr1.2 | CDS | 71055101 | 71055388 | 71055101 | ID=cds.MS.gene60706.t1;Parent=MS.gene60706.t1 |
Gene Sequence |
Protein sequence |