Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60867.t1 | XP_003591828.2 | 62 | 463 | 106 | 4 | 19 | 412 | 6 | 467 | 4.10E-153 | 551.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60867.t1 | Q6NQK2 | 46.2 | 442 | 179 | 13 | 20 | 412 | 5 | 436 | 1.1e-93 | 345.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60867.t1 | G7I498 | 62.0 | 463 | 106 | 4 | 19 | 412 | 6 | 467 | 3.0e-153 | 551.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene60867.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60867.t1 | MTR_1g093680 | 62.203 | 463 | 105 | 4 | 19 | 412 | 6 | 467 | 0.0 | 563 |
| MS.gene60867.t1 | MTR_1g093670 | 77.348 | 362 | 48 | 4 | 54 | 412 | 6 | 336 | 0.0 | 559 |
| MS.gene60867.t1 | MTR_5g053430 | 57.437 | 437 | 140 | 9 | 16 | 412 | 1 | 431 | 5.99e-161 | 461 |
| MS.gene60867.t1 | MTR_5g053430 | 56.782 | 435 | 143 | 8 | 16 | 412 | 1 | 428 | 1.07e-160 | 460 |
| MS.gene60867.t1 | MTR_7g033320 | 53.271 | 214 | 98 | 1 | 21 | 232 | 5 | 218 | 1.44e-77 | 249 |
| MS.gene60867.t1 | MTR_2g014680 | 54.762 | 210 | 92 | 2 | 45 | 251 | 25 | 234 | 4.00e-71 | 226 |
| MS.gene60867.t1 | MTR_4g088245 | 45.520 | 279 | 132 | 8 | 29 | 290 | 19 | 294 | 5.18e-68 | 219 |
| MS.gene60867.t1 | MTR_8g102240 | 51.131 | 221 | 98 | 4 | 49 | 261 | 27 | 245 | 1.95e-67 | 222 |
| MS.gene60867.t1 | MTR_8g102240 | 51.131 | 221 | 98 | 4 | 49 | 261 | 27 | 245 | 2.00e-67 | 222 |
| MS.gene60867.t1 | MTR_4g078875 | 55.080 | 187 | 79 | 2 | 50 | 231 | 24 | 210 | 4.37e-65 | 210 |
| MS.gene60867.t1 | MTR_8g069160 | 52.195 | 205 | 90 | 4 | 29 | 225 | 19 | 223 | 2.31e-64 | 207 |
| MS.gene60867.t1 | MTR_2g090735 | 55.914 | 186 | 78 | 2 | 50 | 231 | 25 | 210 | 5.53e-60 | 197 |
| MS.gene60867.t1 | MTR_6g084430 | 33.520 | 179 | 88 | 10 | 71 | 241 | 5 | 160 | 2.10e-15 | 77.0 |
| MS.gene60867.t1 | MTR_2g080010 | 35.333 | 150 | 71 | 9 | 69 | 211 | 13 | 143 | 1.45e-12 | 68.9 |
| MS.gene60867.t1 | MTR_1g008740 | 31.579 | 171 | 93 | 9 | 71 | 233 | 13 | 167 | 2.33e-11 | 65.1 |
| MS.gene60867.t1 | MTR_1g008740 | 31.579 | 171 | 93 | 9 | 71 | 233 | 27 | 181 | 2.65e-11 | 65.1 |
| MS.gene60867.t1 | MTR_8g059170 | 34.752 | 141 | 76 | 6 | 71 | 210 | 14 | 139 | 2.81e-11 | 64.7 |
| MS.gene60867.t1 | MTR_2157s0010 | 27.442 | 215 | 119 | 10 | 69 | 265 | 6 | 201 | 2.93e-11 | 63.9 |
| MS.gene60867.t1 | MTR_3g109340 | 30.488 | 164 | 91 | 9 | 71 | 227 | 22 | 169 | 6.70e-11 | 63.9 |
| MS.gene60867.t1 | MTR_3g088110 | 35.417 | 144 | 72 | 8 | 71 | 211 | 7 | 132 | 7.17e-11 | 63.2 |
| MS.gene60867.t1 | MTR_3g109340 | 30.675 | 163 | 91 | 9 | 71 | 227 | 22 | 168 | 7.63e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60867.t1 | AT1G25580 | 46.275 | 443 | 177 | 13 | 20 | 412 | 5 | 436 | 1.85e-115 | 345 |
| MS.gene60867.t1 | AT3G01600 | 51.339 | 224 | 104 | 3 | 20 | 241 | 4 | 224 | 3.40e-72 | 231 |
| MS.gene60867.t1 | AT5G14490 | 52.113 | 213 | 99 | 2 | 20 | 230 | 4 | 215 | 1.96e-70 | 224 |
| MS.gene60867.t1 | AT5G14490 | 52.113 | 213 | 99 | 2 | 20 | 230 | 4 | 215 | 3.30e-70 | 225 |
| MS.gene60867.t1 | AT5G14490 | 52.113 | 213 | 99 | 2 | 20 | 230 | 7 | 218 | 4.14e-70 | 225 |
| MS.gene60867.t1 | AT5G14490 | 52.113 | 213 | 99 | 2 | 20 | 230 | 7 | 218 | 8.07e-70 | 225 |
| MS.gene60867.t1 | AT4G29230 | 56.250 | 192 | 73 | 3 | 49 | 231 | 28 | 217 | 1.06e-69 | 227 |
| MS.gene60867.t1 | AT4G29230 | 56.250 | 192 | 73 | 3 | 49 | 231 | 28 | 217 | 4.26e-69 | 227 |
| MS.gene60867.t1 | AT4G29230 | 55.729 | 192 | 73 | 3 | 49 | 231 | 28 | 216 | 3.57e-68 | 224 |
| MS.gene60867.t1 | AT1G28470 | 50.679 | 221 | 98 | 3 | 22 | 236 | 28 | 243 | 6.45e-67 | 216 |
| MS.gene60867.t1 | AT5G56620 | 52.308 | 195 | 80 | 3 | 49 | 231 | 22 | 215 | 1.76e-64 | 213 |
| MS.gene60867.t1 | AT5G56620 | 52.308 | 195 | 80 | 3 | 49 | 231 | 22 | 215 | 2.18e-64 | 212 |
| MS.gene60867.t1 | AT5G56620 | 52.308 | 195 | 80 | 3 | 49 | 231 | 22 | 215 | 4.22e-64 | 211 |
| MS.gene60867.t1 | AT4G28500 | 49.776 | 223 | 98 | 5 | 20 | 231 | 2 | 221 | 8.10e-64 | 207 |
| MS.gene60867.t1 | AT3G18400 | 32.738 | 168 | 92 | 7 | 71 | 233 | 5 | 156 | 1.22e-13 | 72.0 |
| MS.gene60867.t1 | AT5G18270 | 30.041 | 243 | 121 | 14 | 63 | 284 | 13 | 227 | 2.26e-13 | 71.2 |
| MS.gene60867.t1 | AT5G18270 | 30.041 | 243 | 121 | 14 | 63 | 284 | 13 | 227 | 3.62e-13 | 70.5 |
| MS.gene60867.t1 | AT5G39610 | 33.721 | 172 | 86 | 7 | 56 | 226 | 10 | 154 | 1.24e-12 | 68.6 |
| MS.gene60867.t1 | AT1G01720 | 36.111 | 144 | 71 | 8 | 71 | 211 | 7 | 132 | 4.07e-12 | 67.0 |
| MS.gene60867.t1 | AT3G04420 | 31.056 | 161 | 94 | 7 | 72 | 229 | 4 | 150 | 2.44e-11 | 64.7 |
| MS.gene60867.t1 | AT1G02230 | 31.361 | 169 | 92 | 8 | 72 | 233 | 4 | 155 | 2.86e-11 | 65.1 |
| MS.gene60867.t1 | AT3G12910 | 30.864 | 162 | 91 | 8 | 60 | 215 | 9 | 155 | 3.97e-11 | 64.3 |
| MS.gene60867.t1 | AT1G02220 | 29.375 | 160 | 93 | 6 | 72 | 228 | 4 | 146 | 4.12e-11 | 64.7 |
| MS.gene60867.t1 | AT5G61430 | 32.000 | 175 | 94 | 8 | 71 | 238 | 16 | 172 | 8.97e-11 | 63.5 |
| MS.gene60867.t1 | AT3G04420 | 31.056 | 161 | 94 | 7 | 72 | 229 | 4 | 150 | 9.19e-11 | 63.5 |
Find 97 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTCTTGGTCTACAAAAT+TGG | 0.165705 | 1.4:+73402320 | None:intergenic |
| TGCCAGTGTGGTCAAGATTT+TGG | 0.220058 | 1.4:+73401534 | None:intergenic |
| TATGGTGAGTTTCTTGTTCT+TGG | 0.221376 | 1.4:+73402307 | None:intergenic |
| ATAGTTGCTTCCGCGGTTTC+AGG | 0.226841 | 1.4:+73402402 | None:intergenic |
| TCCACAACATGTTGACAATT+AGG | 0.244707 | 1.4:+73405264 | None:intergenic |
| AGGTTCAGTGGTCGCAAAAT+TGG | 0.270772 | 1.4:+73402356 | None:intergenic |
| ATTTATCACTACTCTTAAAA+TGG | 0.271764 | 1.4:-73402904 | MS.gene60867:CDS |
| CCAGCAGCAGCAAGCCATAT+TGG | 0.276087 | 1.4:-73402448 | MS.gene60867:CDS |
| TCGAACCAAGAAAATGTTTC+CGG | 0.290852 | 1.4:+73401680 | None:intergenic |
| TGACATGCCACTGAATCTAT+TGG | 0.299354 | 1.4:-73401711 | MS.gene60867:CDS |
| CATCTGATCAAGAGATAATA+TGG | 0.323541 | 1.4:-73402983 | MS.gene60867:CDS |
| TCTTCTAACTGAGGAAGATT+TGG | 0.326168 | 1.4:+73401827 | None:intergenic |
| GGATCAAATTTAACACCTTT+AGG | 0.328542 | 1.4:+73403005 | None:intergenic |
| CCACAACATGTTGACAATTA+GGG | 0.332418 | 1.4:+73405265 | None:intergenic |
| ATGTCTTTCTTTAACTGCTC+TGG | 0.340220 | 1.4:+73401566 | None:intergenic |
| GAATCTATTGGATTCACTTC+CGG | 0.358496 | 1.4:-73401699 | MS.gene60867:CDS |
| TGTTCTTGGTCTACAAAATT+GGG | 0.368626 | 1.4:+73402321 | None:intergenic |
| ATAAAATGAATTTAACATAA+TGG | 0.373804 | 1.4:+73401437 | None:intergenic |
| GTACACTTGCAACCGCTATA+AGG | 0.374099 | 1.4:-73405344 | MS.gene60867:CDS |
| CAGCAGCAGCAAGCCATATT+GGG | 0.389779 | 1.4:-73402447 | MS.gene60867:CDS |
| TATAAGCTTTCACTGCTCTA+TGG | 0.392319 | 1.4:+73402721 | None:intergenic |
| CTTTATATGTTTCCAGAGAA+TGG | 0.394253 | 1.4:-73402570 | MS.gene60867:CDS |
| TGAACTCCGTTCAAGAAGAT+AGG | 0.395219 | 1.4:+73402618 | None:intergenic |
| GGTTACAAACCTCTGCAAAA+TGG | 0.397380 | 1.4:+73405861 | None:intergenic |
| CCAATATGGCTTGCTGCTGC+TGG | 0.415718 | 1.4:+73402448 | None:intergenic |
| ACCGCTATAAGGTGTGCATC+TGG | 0.428125 | 1.4:-73405333 | MS.gene60867:CDS |
| TATGTCCGCTGGCACAAGAC+TGG | 0.431620 | 1.4:-73402651 | MS.gene60867:CDS |
| GGTTCAGTGGTCGCAAAATT+GGG | 0.435686 | 1.4:+73402357 | None:intergenic |
| GCAGTGAAAGCTTATAGTAC+TGG | 0.438200 | 1.4:-73402714 | MS.gene60867:CDS |
| CGACATTCGATTAAGTCAAC+TGG | 0.441693 | 1.4:-73401486 | MS.gene60867:CDS |
| AAAGTTCTACCTGAGGAATA+TGG | 0.448471 | 1.4:+73402289 | None:intergenic |
| AGAATGGCTACTTAATAGTC+AGG | 0.475425 | 1.4:-73401807 | MS.gene60867:CDS |
| TGGAAGATCATTGAGAGCAT+TGG | 0.478359 | 1.4:+73401457 | None:intergenic |
| TTAACACCTTTAGGAAGTCC+AGG | 0.482399 | 1.4:+73403014 | None:intergenic |
| GCCAGTCTCCGAAAAGGCAC+AGG | 0.483606 | 1.4:-73401643 | MS.gene60867:CDS |
| AATATAGGTGTTTCACAAGA+TGG | 0.488029 | 1.4:-73402762 | MS.gene60867:intron |
| CAGAAGAGGATGAGAGGGAA+GGG | 0.488806 | 1.4:-73402497 | MS.gene60867:CDS |
| GTTATGCATCAGTATCATCT+TGG | 0.493181 | 1.4:-73402522 | MS.gene60867:CDS |
| CTTTCGACATATGATCATCT+AGG | 0.495768 | 1.4:-73401590 | MS.gene60867:CDS |
| TAGAAACTCAATTTCATGTA+GGG | 0.504338 | 1.4:-73401745 | MS.gene60867:CDS |
| ACTCATCCTCAGCATTTGCC+AGG | 0.505505 | 1.4:-73402864 | MS.gene60867:intron |
| TTCAAAGCCAGTCTCCGAAA+AGG | 0.507580 | 1.4:-73401649 | MS.gene60867:CDS |
| TTTCCAGAGAATGGAGGAAA+AGG | 0.510158 | 1.4:-73402561 | MS.gene60867:CDS |
| ACTACTCTTAAAATGGATGA+TGG | 0.510952 | 1.4:-73402897 | MS.gene60867:CDS |
| ACAAAATTGGGACTGATAAG+AGG | 0.512652 | 1.4:+73402333 | None:intergenic |
| GTGATAAATGCATCGATGAA+AGG | 0.516322 | 1.4:+73402918 | None:intergenic |
| AAGAGTTTGCTTATGTCCGC+TGG | 0.517104 | 1.4:-73402662 | MS.gene60867:CDS |
| TGATAAATGCATCGATGAAA+GGG | 0.518562 | 1.4:+73402919 | None:intergenic |
| ACAGAAGAGGATGAGAGGGA+AGG | 0.522455 | 1.4:-73402498 | MS.gene60867:CDS |
| CGAAAGCGGCGAAGAATATG+TGG | 0.522848 | 1.4:-73402687 | MS.gene60867:CDS |
| TAGCGGTTGCAAGTGTACTT+TGG | 0.525421 | 1.4:+73405349 | None:intergenic |
| TTCTTGAACGGAGTTCAGAA+AGG | 0.529603 | 1.4:-73402612 | MS.gene60867:CDS |
| ATCTTCCTCAGTTAGAAGAA+TGG | 0.529692 | 1.4:-73401823 | MS.gene60867:CDS |
| CAATTAGGGCACGCTCTGGT+AGG | 0.534555 | 1.4:+73405279 | None:intergenic |
| CATATTATCTCTTGATCAGA+TGG | 0.535616 | 1.4:+73402984 | None:intergenic |
| TGGCACTTGCTTGCAAAAGT+TGG | 0.539348 | 1.4:-73402963 | MS.gene60867:CDS |
| TCTTTCCAGTCTTGTGCCAG+CGG | 0.546974 | 1.4:+73402646 | None:intergenic |
| TTGACAATTAGGGCACGCTC+TGG | 0.548349 | 1.4:+73405275 | None:intergenic |
| GAGTGGCCTGGACTTCCTAA+AGG | 0.554416 | 1.4:-73403020 | MS.gene60867:CDS |
| ATGCAGACCATCGTGGTTGG+TGG | 0.556083 | 1.4:-73405373 | MS.gene60867:intron |
| GTAGAAACTCAATTTCATGT+AGG | 0.560253 | 1.4:-73401746 | MS.gene60867:CDS |
| TGGAACAGAAGAGGATGAGA+GGG | 0.560783 | 1.4:-73402502 | MS.gene60867:CDS |
| CCCTAATTGTCAACATGTTG+TGG | 0.563512 | 1.4:-73405265 | MS.gene60867:CDS |
| AGAAACTCACCATATTCCTC+AGG | 0.572055 | 1.4:-73402298 | MS.gene60867:intron |
| TTGCTTGCAAAAGTTGGTGA+AGG | 0.575602 | 1.4:-73402957 | MS.gene60867:CDS |
| TAGGTAACACAAGAGTGGCC+TGG | 0.577846 | 1.4:-73403032 | MS.gene60867:CDS |
| ATAGTCAGGATGACTGTGAA+GGG | 0.580319 | 1.4:-73401793 | MS.gene60867:CDS |
| ACTAAACCTATCTTCTTGAA+CGG | 0.586510 | 1.4:-73402624 | MS.gene60867:CDS |
| TGATCATATGTCGAAAGACT+AGG | 0.588679 | 1.4:+73401596 | None:intergenic |
| TTGGAACAGAAGAGGATGAG+AGG | 0.602637 | 1.4:-73402503 | MS.gene60867:CDS |
| AATAGTCAGGATGACTGTGA+AGG | 0.603938 | 1.4:-73401794 | MS.gene60867:CDS |
| TGAAATTGAGTTTCTACCGT+CGG | 0.610371 | 1.4:+73401752 | None:intergenic |
| CAGTTGACTTAATCGAATGT+CGG | 0.615405 | 1.4:+73401487 | None:intergenic |
| AATGCATCGATGAAAGGGTG+AGG | 0.617026 | 1.4:+73402924 | None:intergenic |
| GTATCATCTTGGAACAGAAG+AGG | 0.624650 | 1.4:-73402511 | MS.gene60867:CDS |
| AGTAGCCATTCTTCTAACTG+AGG | 0.625387 | 1.4:+73401818 | None:intergenic |
| CCAGTCTCCGAAAAGGCACA+GGG | 0.626166 | 1.4:-73401642 | MS.gene60867:CDS |
| ATTCGCAATAGTTGCTTCCG+CGG | 0.627295 | 1.4:+73402395 | None:intergenic |
| TCCAGATGCACACCTTATAG+CGG | 0.632029 | 1.4:+73405332 | None:intergenic |
| CAAGCTCTACATTGCCAGTG+TGG | 0.632863 | 1.4:+73401522 | None:intergenic |
| TATATGCAGACCATCGTGGT+TGG | 0.636765 | 1.4:-73405376 | MS.gene60867:intron |
| TCAAGATGTTCCTGAAACCG+CGG | 0.637589 | 1.4:-73402412 | MS.gene60867:CDS |
| AGTGAATCCAATAGATTCAG+TGG | 0.638302 | 1.4:+73401704 | None:intergenic |
| TACAAACCTCTGCAAAATGG+AGG | 0.639210 | 1.4:+73405864 | None:intergenic |
| AGAGCAGTTAAAGAAAGACA+TGG | 0.639913 | 1.4:-73401564 | MS.gene60867:CDS |
| CATATGTCGAAAGACTAGGC+TGG | 0.640562 | 1.4:+73401600 | None:intergenic |
| GTTGTTAGGTAACACAAGAG+TGG | 0.643631 | 1.4:-73403037 | MS.gene60867:intron |
| TATCCACCTGGCAAATGCTG+AGG | 0.644206 | 1.4:+73402858 | None:intergenic |
| ATAGTACTGGAAGTCGAAAG+CGG | 0.647551 | 1.4:-73402701 | MS.gene60867:CDS |
| ACTGATAAGAGGAGGTTCAG+TGG | 0.655003 | 1.4:+73402344 | None:intergenic |
| CTTATATATGCAGACCATCG+TGG | 0.659760 | 1.4:-73405380 | MS.gene60867:intron |
| TCCGAAAATTGATCTACCGA+CGG | 0.660122 | 1.4:-73401768 | MS.gene60867:CDS |
| TATATGTTTCCAGAGAATGG+AGG | 0.668040 | 1.4:-73402567 | MS.gene60867:CDS |
| TGCCAAAATCTTGACCACAC+TGG | 0.683464 | 1.4:-73401536 | MS.gene60867:CDS |
| CTTTGGTCCACCAACCACGA+TGG | 0.684049 | 1.4:+73405366 | None:intergenic |
| AAATTGGGACTGATAAGAGG+AGG | 0.689769 | 1.4:+73402336 | None:intergenic |
| ACTGCTTCACGATTGTATCG+TGG | 0.709262 | 1.4:-73405992 | MS.gene60867:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAAATATTAATATTA+GGG | - | chr1.4:73402803-73402822 | MS.gene60867:intron | 0.0% |
| !! | TTAAATAAAATATTAATATT+AGG | - | chr1.4:73402802-73402821 | MS.gene60867:intron | 0.0% |
| !! | ATTATAGAAAAATAATGTTA+GGG | + | chr1.4:73403898-73403917 | None:intergenic | 10.0% |
| !! | TATTATAGAAAAATAATGTT+AGG | + | chr1.4:73403899-73403918 | None:intergenic | 10.0% |
| !! | AAAAGAATGTCTAAAAATAA+TGG | + | chr1.4:73405319-73405338 | None:intergenic | 15.0% |
| !! | AACAAATCAAAGAAATTTAA+AGG | + | chr1.4:73402418-73402437 | None:intergenic | 15.0% |
| !! | ATACAATAAGAAAATATTAG+TGG | + | chr1.4:73405230-73405249 | None:intergenic | 15.0% |
| !!! | ACACAGATTTTTATTTATAT+AGG | + | chr1.4:73403841-73403860 | None:intergenic | 15.0% |
| !!! | GAGATTAATTTTAATAGTTT+TGG | - | chr1.4:73405526-73405545 | MS.gene60867:intron | 15.0% |
| !! | AAATAAATTGCTCAACTTAA+AGG | + | chr1.4:73403058-73403077 | None:intergenic | 20.0% |
| !! | AAATATGAAAATAACCTAAG+TGG | - | chr1.4:73405556-73405575 | MS.gene60867:intron | 20.0% |
| !! | AAGAACAAAGATCAAATTAT+TGG | + | chr1.4:73404319-73404338 | None:intergenic | 20.0% |
| !! | AATTGTAGATGGATAAATAA+AGG | + | chr1.4:73403122-73403141 | None:intergenic | 20.0% |
| !! | AGAATGTAGAAGAAATTTAA+AGG | + | chr1.4:73402458-73402477 | None:intergenic | 20.0% |
| !! | ATAAGAACAAAGATCAAAAT+TGG | + | chr1.4:73404288-73404307 | None:intergenic | 20.0% |
| !! | ATATATAAGTGTGATACTTT+AGG | + | chr1.4:73404363-73404382 | None:intergenic | 20.0% |
| !! | ATTTATCACTACTCTTAAAA+TGG | - | chr1.4:73404539-73404558 | MS.gene60867:intron | 20.0% |
| !! | GCTATATGATTAAACAATAT+AGG | - | chr1.4:73404666-73404685 | MS.gene60867:intron | 20.0% |
| !! | TAAGAACAAAGATCAAAATT+GGG | + | chr1.4:73404287-73404306 | None:intergenic | 20.0% |
| !! | TTTGAATAATTTCTGTTGTT+AGG | - | chr1.4:73404392-73404411 | MS.gene60867:intron | 20.0% |
| !!! | ACTTATTTTACTTAGAAGTT+AGG | + | chr1.4:73403870-73403889 | None:intergenic | 20.0% |
| !!! | ATTTTAATAGTTTTGGTTTG+TGG | - | chr1.4:73405533-73405552 | MS.gene60867:intron | 20.0% |
| !!! | TGTGATTTGTTAAATGAATA+TGG | + | chr1.4:73402350-73402369 | None:intergenic | 20.0% |
| !!! | TGTTTTAAATCATATTTCAC+TGG | - | chr1.4:73402245-73402264 | MS.gene60867:intron | 20.0% |
| !!! | TTTTCTTGTGTAAATGAATT+AGG | - | chr1.4:73405413-73405432 | MS.gene60867:intron | 20.0% |
| ! | AAAAAAAAAAGGGTTTCTGT+TGG | + | chr1.4:73403965-73403984 | None:intergenic | 25.0% |
| ! | AAAACAATGATGATCAATGA+GGG | + | chr1.4:73403192-73403211 | None:intergenic | 25.0% |
| ! | AAATACATGACATTATAGCA+TGG | - | chr1.4:73404233-73404252 | MS.gene60867:intron | 25.0% |
| ! | AAGAACAAAATTATCCACTT+AGG | + | chr1.4:73405573-73405592 | None:intergenic | 25.0% |
| ! | AAGAGGGAAAGAAAAAAAAA+AGG | + | chr1.4:73403976-73403995 | None:intergenic | 25.0% |
| ! | AAGGATGTTGTATTTGATAT+GGG | + | chr1.4:73403582-73403601 | None:intergenic | 25.0% |
| ! | AATTTATTCCTGTGTGATTA+CGG | - | chr1.4:73404055-73404074 | MS.gene60867:intron | 25.0% |
| ! | AGAGGGAAAGAAAAAAAAAA+GGG | + | chr1.4:73403975-73403994 | None:intergenic | 25.0% |
| ! | ATGCAGTTATATCGATATTA+GGG | + | chr1.4:73403928-73403947 | None:intergenic | 25.0% |
| ! | ATGCTATAATGTCATGTATT+TGG | + | chr1.4:73404234-73404253 | None:intergenic | 25.0% |
| ! | ATGGCTCTTAATATTATTTG+TGG | - | chr1.4:73402998-73403017 | MS.gene60867:CDS | 25.0% |
| ! | CTAAATCATTCACAATGATT+TGG | + | chr1.4:73404183-73404202 | None:intergenic | 25.0% |
| ! | GGAAAATAGAAAATAAATGG+AGG | + | chr1.4:73402905-73402924 | None:intergenic | 25.0% |
| ! | GTGGGAAAATAGAAAATAAA+TGG | + | chr1.4:73402908-73402927 | None:intergenic | 25.0% |
| ! | TAGAAACTCAATTTCATGTA+GGG | - | chr1.4:73405698-73405717 | MS.gene60867:intron | 25.0% |
| ! | TCCATCTACAATTGAAAAAA+AGG | - | chr1.4:73403129-73403148 | MS.gene60867:intron | 25.0% |
| ! | TGAACAAATTGTAGTCAATT+AGG | - | chr1.4:73401484-73401503 | MS.gene60867:CDS | 25.0% |
| ! | TTTGTGCTTCATAAAAACTA+TGG | - | chr1.4:73403651-73403670 | MS.gene60867:intron | 25.0% |
| !! | ACATTCTTTTGCTTTCTTAT+TGG | - | chr1.4:73405329-73405348 | MS.gene60867:CDS | 25.0% |
| !! | CTCAACAGTAAATTTGAAAT+CGG | - | chr1.4:73403488-73403507 | MS.gene60867:intron | 25.0% |
| !! | TCAACAGTAAATTTGAAATC+GGG | - | chr1.4:73403489-73403508 | MS.gene60867:intron | 25.0% |
| !! | TGACACGAAATATTAATTTG+TGG | - | chr1.4:73405364-73405383 | MS.gene60867:CDS | 25.0% |
| !! | TTTAAAGGAATGTTGATGAA+AGG | + | chr1.4:73402403-73402422 | None:intergenic | 25.0% |
| !!! | ACCTTTTTTTCAATTGTAGA+TGG | + | chr1.4:73403133-73403152 | None:intergenic | 25.0% |
| !!! | TGTATCTTTTGCTTTGTTTT+TGG | - | chr1.4:73405245-73405264 | MS.gene60867:intron | 25.0% |
| AAAGTTTGCAAGCATAATCT+AGG | + | chr1.4:73401736-73401755 | None:intergenic | 30.0% | |
| AATACAACATCCTTCTCTAA+CGG | - | chr1.4:73403588-73403607 | MS.gene60867:intron | 30.0% | |
| AATATAGGTGTTTCACAAGA+TGG | - | chr1.4:73404681-73404700 | MS.gene60867:intron | 30.0% | |
| ACCAATACATCTAATCTTTG+AGG | - | chr1.4:73403626-73403645 | MS.gene60867:intron | 30.0% | |
| ACCTCAAAGATTAGATGTAT+TGG | + | chr1.4:73403630-73403649 | None:intergenic | 30.0% | |
| ACTAAACCTATCTTCTTGAA+CGG | - | chr1.4:73404819-73404838 | MS.gene60867:intron | 30.0% | |
| ACTACTCTTAAAATGGATGA+TGG | - | chr1.4:73404546-73404565 | MS.gene60867:intron | 30.0% | |
| AGTAGACCAAATGAATGATA+GGG | - | chr1.4:73404117-73404136 | MS.gene60867:intron | 30.0% | |
| CAAAACAATGATGATCAATG+AGG | + | chr1.4:73403193-73403212 | None:intergenic | 30.0% | |
| CAAGAGATGCACAAAAAATT+AGG | - | chr1.4:73402647-73402666 | MS.gene60867:CDS | 30.0% | |
| CATATTATCTCTTGATCAGA+TGG | + | chr1.4:73404462-73404481 | None:intergenic | 30.0% | |
| CATCTGATCAAGAGATAATA+TGG | - | chr1.4:73404460-73404479 | MS.gene60867:intron | 30.0% | |
| CATGCAGTTATATCGATATT+AGG | + | chr1.4:73403929-73403948 | None:intergenic | 30.0% | |
| CTTTATATGTTTCCAGAGAA+TGG | - | chr1.4:73404873-73404892 | MS.gene60867:intron | 30.0% | |
| GAAGGATGTTGTATTTGATA+TGG | + | chr1.4:73403583-73403602 | None:intergenic | 30.0% | |
| GAGAGAAGAGAACTATATTA+GGG | + | chr1.4:73403723-73403742 | None:intergenic | 30.0% | |
| GGATCAAATTTAACACCTTT+AGG | + | chr1.4:73404441-73404460 | None:intergenic | 30.0% | |
| GTAGAAACTCAATTTCATGT+AGG | - | chr1.4:73405697-73405716 | MS.gene60867:intron | 30.0% | |
| GTATTACATCTACGTCTATT+GGG | + | chr1.4:73404026-73404045 | None:intergenic | 30.0% | |
| TCAAAGATTAGATGTATTGG+TGG | + | chr1.4:73403627-73403646 | None:intergenic | 30.0% | |
| TCTTGTGTAAATGAATTAGG+AGG | - | chr1.4:73405416-73405435 | MS.gene60867:intron | 30.0% | |
| TGAATTAAGAATTAGAACCC+TGG | + | chr1.4:73405459-73405478 | None:intergenic | 30.0% | |
| TGAGAGAAGAGAACTATATT+AGG | + | chr1.4:73403724-73403743 | None:intergenic | 30.0% | |
| TGTATTACATCTACGTCTAT+TGG | + | chr1.4:73404027-73404046 | None:intergenic | 30.0% | |
| TGTTCTTGGTCTACAAAATT+GGG | + | chr1.4:73405125-73405144 | None:intergenic | 30.0% | |
| TGTTTACACTTACCATAGAA+GGG | + | chr1.4:73402935-73402954 | None:intergenic | 30.0% | |
| TTCTAACACCAATTCAGAAT+GGG | - | chr1.4:73405484-73405503 | MS.gene60867:intron | 30.0% | |
| TTGTTCTTGGTCTACAAAAT+TGG | + | chr1.4:73405126-73405145 | None:intergenic | 30.0% | |
| TTGTTTACACTTACCATAGA+AGG | + | chr1.4:73402936-73402955 | None:intergenic | 30.0% | |
| TTTCTAACACCAATTCAGAA+TGG | - | chr1.4:73405483-73405502 | MS.gene60867:intron | 30.0% | |
| ! | AAAAGGTGCAAAAACTAACT+GGG | - | chr1.4:73404899-73404918 | MS.gene60867:intron | 30.0% |
| ! | ACAACTGCAATTTAAAACCA+TGG | + | chr1.4:73401551-73401570 | None:intergenic | 30.0% |
| ! | ACTTTCTGATGTAACTTTTG+CGG | + | chr1.4:73402141-73402160 | None:intergenic | 30.0% |
| ! | ATCATCTTTTCTTCCCAATA+TGG | + | chr1.4:73405012-73405031 | None:intergenic | 30.0% |
| ! | CAAAGATTAGATGTATTGGT+GGG | + | chr1.4:73403626-73403645 | None:intergenic | 30.0% |
| ! | CTTACTAGCTAGTATTTCTA+CGG | + | chr1.4:73404094-73404113 | None:intergenic | 30.0% |
| ! | GAAGAAATAGATTTAGAGCT+TGG | + | chr1.4:73402381-73402400 | None:intergenic | 30.0% |
| ! | TCTTTTGCTTTCTTATTGGT+TGG | - | chr1.4:73405333-73405352 | MS.gene60867:CDS | 30.0% |
| ! | TGATAAATGCATCGATGAAA+GGG | + | chr1.4:73404527-73404546 | None:intergenic | 30.0% |
| ! | TTACTAGCTAGTATTTCTAC+GGG | + | chr1.4:73404093-73404112 | None:intergenic | 30.0% |
| !! | GAAATTCTAAAATGTACGAC+AGG | - | chr1.4:73402825-73402844 | MS.gene60867:intron | 30.0% |
| !!! | TTTGCTTTGTTTTTGGAAGA+GGG | - | chr1.4:73405252-73405271 | MS.gene60867:intron | 30.0% |
| !!! | TTTTGCTTTGTTTTTGGAAG+AGG | - | chr1.4:73405251-73405270 | MS.gene60867:intron | 30.0% |
| AAACTGTCGTCAAATTTCGT+CGG | - | chr1.4:73402954-73402973 | MS.gene60867:CDS | 35.0% | |
| AAAGTTCTACCTGAGGAATA+TGG | + | chr1.4:73405157-73405176 | None:intergenic | 35.0% | |
| AATCCTTGTAGATGTGTCTA+AGG | - | chr1.4:73403223-73403242 | MS.gene60867:intron | 35.0% | |
| ACAAAATTGGGACTGATAAG+AGG | + | chr1.4:73405113-73405132 | None:intergenic | 35.0% | |
| AGAATGGCTACTTAATAGTC+AGG | - | chr1.4:73405636-73405655 | MS.gene60867:intron | 35.0% | |
| AGAGCAGTTAAAGAAAGACA+TGG | - | chr1.4:73405879-73405898 | MS.gene60867:CDS | 35.0% | |
| AGTGAATCCAATAGATTCAG+TGG | + | chr1.4:73405742-73405761 | None:intergenic | 35.0% | |
| ATAAGACCGTTTAGAAGAAG+AGG | + | chr1.4:73403993-73404012 | None:intergenic | 35.0% | |
| ATACAACATCCTTCTCTAAC+GGG | - | chr1.4:73403589-73403608 | MS.gene60867:intron | 35.0% | |
| ATATTAAGAGCCATGCTATG+CGG | + | chr1.4:73402992-73403011 | None:intergenic | 35.0% | |
| ATATTGCATTTCTGTGCGTA+AGG | - | chr1.4:73402292-73402311 | MS.gene60867:intron | 35.0% | |
| ATCTTCCTCAGTTAGAAGAA+TGG | - | chr1.4:73405620-73405639 | MS.gene60867:intron | 35.0% | |
| ATGTCTTTCTTTAACTGCTC+TGG | + | chr1.4:73405880-73405899 | None:intergenic | 35.0% | |
| ATTGAATTTCCCGTTAGAGA+AGG | + | chr1.4:73403601-73403620 | None:intergenic | 35.0% | |
| ATTTCGCCTTCATTCTGATT+CGG | - | chr1.4:73401832-73401851 | MS.gene60867:CDS | 35.0% | |
| CAAATGAATGATAGGGCAAT+AGG | - | chr1.4:73404124-73404143 | MS.gene60867:intron | 35.0% | |
| CAGTAGACCAAATGAATGAT+AGG | - | chr1.4:73404116-73404135 | MS.gene60867:intron | 35.0% | |
| CCACAACATGTTGACAATTA+GGG | + | chr1.4:73402181-73402200 | None:intergenic | 35.0% | |
| CTATTGCCCTATCATTCATT+TGG | + | chr1.4:73404126-73404145 | None:intergenic | 35.0% | |
| CTTTCGACATATGATCATCT+AGG | - | chr1.4:73405853-73405872 | MS.gene60867:intron | 35.0% | |
| GAAAGGCTGCAAAAAGATTA+TGG | - | chr1.4:73404848-73404867 | MS.gene60867:intron | 35.0% | |
| GAAGTTAAAAGTTCTACCTG+AGG | + | chr1.4:73405164-73405183 | None:intergenic | 35.0% | |
| GAATCATTCCCATTCTGAAT+TGG | + | chr1.4:73405495-73405514 | None:intergenic | 35.0% | |
| GAATCTATTGGATTCACTTC+CGG | - | chr1.4:73405744-73405763 | MS.gene60867:intron | 35.0% | |
| GTTATGCATCAGTATCATCT+TGG | - | chr1.4:73404921-73404940 | MS.gene60867:intron | 35.0% | |
| TAAAGCTTAGATTATCCACC+TGG | + | chr1.4:73404600-73404619 | None:intergenic | 35.0% | |
| TAAGACCGTTTAGAAGAAGA+GGG | + | chr1.4:73403992-73404011 | None:intergenic | 35.0% | |
| TACTCCTAAGACATTGATCA+CGG | - | chr1.4:73402491-73402510 | MS.gene60867:CDS | 35.0% | |
| TATAAGCTTTCACTGCTCTA+TGG | + | chr1.4:73404725-73404744 | None:intergenic | 35.0% | |
| TATATGTTTCCAGAGAATGG+AGG | - | chr1.4:73404876-73404895 | MS.gene60867:intron | 35.0% | |
| TATGGTGAGTTTCTTGTTCT+TGG | + | chr1.4:73405139-73405158 | None:intergenic | 35.0% | |
| TATTAGTGGCAGATGATAAC+TGG | + | chr1.4:73405216-73405235 | None:intergenic | 35.0% | |
| TCAACCACATTTAAGTCCAA+CGG | + | chr1.4:73401811-73401830 | None:intergenic | 35.0% | |
| TCCACAACATGTTGACAATT+AGG | + | chr1.4:73402182-73402201 | None:intergenic | 35.0% | |
| TCGAACCAAGAAAATGTTTC+CGG | + | chr1.4:73405766-73405785 | None:intergenic | 35.0% | |
| TCGAAGTTGTGATGTAGTTA+TGG | - | chr1.4:73401684-73401703 | MS.gene60867:CDS | 35.0% | |
| TCTTCTAACTGAGGAAGATT+TGG | + | chr1.4:73405619-73405638 | None:intergenic | 35.0% | |
| TCTTTCCCTCTTCTTCTAAA+CGG | - | chr1.4:73403984-73404003 | MS.gene60867:intron | 35.0% | |
| TGAAATTGAGTTTCTACCGT+CGG | + | chr1.4:73405694-73405713 | None:intergenic | 35.0% | |
| TGATCATATGTCGAAAGACT+AGG | + | chr1.4:73405850-73405869 | None:intergenic | 35.0% | |
| TGTGCGTAAGGTTTATTTCA+TGG | - | chr1.4:73402304-73402323 | MS.gene60867:CDS | 35.0% | |
| ! | CAGTTGACTTAATCGAATGT+CGG | + | chr1.4:73405959-73405978 | None:intergenic | 35.0% |
| ! | GAAAAGGTGCAAAAACTAAC+TGG | - | chr1.4:73404898-73404917 | MS.gene60867:intron | 35.0% |
| ! | GTGATAAATGCATCGATGAA+AGG | + | chr1.4:73404528-73404547 | None:intergenic | 35.0% |
| !! | ATGGTGAATTTCTAAGACCA+TGG | - | chr1.4:73401531-73401550 | MS.gene60867:CDS | 35.0% |
| !!! | GCAAACTTTTTCTGAAACCT+AGG | - | chr1.4:73401747-73401766 | MS.gene60867:CDS | 35.0% |
| AAACCCGTTGGACTTAAATG+TGG | - | chr1.4:73401804-73401823 | MS.gene60867:CDS | 40.0% | |
| AAATTGGGACTGATAAGAGG+AGG | + | chr1.4:73405110-73405129 | None:intergenic | 40.0% | |
| AACCAAATCCCCCAATTAAG+CGG | + | chr1.4:73401864-73401883 | None:intergenic | 40.0% | |
| AATAGTCAGGATGACTGTGA+AGG | - | chr1.4:73405649-73405668 | MS.gene60867:intron | 40.0% | |
| AATCGAAGAAACTCCTCCAT+AGG | - | chr1.4:73402523-73402542 | MS.gene60867:CDS | 40.0% | |
| AATGATAGGGCAATAGGTAG+AGG | - | chr1.4:73404130-73404149 | MS.gene60867:intron | 40.0% | |
| ACTACATCACAACTTCGACT+TGG | + | chr1.4:73401682-73401701 | None:intergenic | 40.0% | |
| ACTCCTTAGACACATCTACA+AGG | + | chr1.4:73403229-73403248 | None:intergenic | 40.0% | |
| AGAAACTCACCATATTCCTC+AGG | - | chr1.4:73405145-73405164 | MS.gene60867:intron | 40.0% | |
| AGAGAGAAGAGAACTCTACT+GGG | + | chr1.4:73403769-73403788 | None:intergenic | 40.0% | |
| AGTAGCCATTCTTCTAACTG+AGG | + | chr1.4:73405628-73405647 | None:intergenic | 40.0% | |
| ATAGTCAGGATGACTGTGAA+GGG | - | chr1.4:73405650-73405669 | MS.gene60867:intron | 40.0% | |
| ATGACCGTGATCAATGTCTT+AGG | + | chr1.4:73402498-73402517 | None:intergenic | 40.0% | |
| CAACCACATTTAAGTCCAAC+GGG | + | chr1.4:73401810-73401829 | None:intergenic | 40.0% | |
| CAGTGTAATTAAGCCTATGG+AGG | + | chr1.4:73402539-73402558 | None:intergenic | 40.0% | |
| CCCTAATTGTCAACATGTTG+TGG | - | chr1.4:73402178-73402197 | MS.gene60867:intron | 40.0% | |
| CGACATTCGATTAAGTCAAC+TGG | - | chr1.4:73405957-73405976 | MS.gene60867:intron | 40.0% | |
| CTACATCACAACTTCGACTT+GGG | + | chr1.4:73401681-73401700 | None:intergenic | 40.0% | |
| CTGAAACCTAGGTATGTTGT+CGG | - | chr1.4:73401758-73401777 | MS.gene60867:CDS | 40.0% | |
| CTTATATATGCAGACCATCG+TGG | - | chr1.4:73402063-73402082 | MS.gene60867:intron | 40.0% | |
| GCAGTGAAAGCTTATAGTAC+TGG | - | chr1.4:73404729-73404748 | MS.gene60867:intron | 40.0% | |
| GCTACAACGTGAAATCTCTA+TGG | + | chr1.4:73403464-73403483 | None:intergenic | 40.0% | |
| GGTTACAAACCTCTGCAAAA+TGG | + | chr1.4:73401585-73401604 | None:intergenic | 40.0% | |
| GTAACCACATGTAGCTTATG+CGG | - | chr1.4:73401599-73401618 | MS.gene60867:CDS | 40.0% | |
| GTATCATCTTGGAACAGAAG+AGG | - | chr1.4:73404932-73404951 | MS.gene60867:intron | 40.0% | |
| GTCTTAGGAGTAAGCACAAT+GGG | + | chr1.4:73402483-73402502 | None:intergenic | 40.0% | |
| GTGCAGTGTAATTAAGCCTA+TGG | + | chr1.4:73402542-73402561 | None:intergenic | 40.0% | |
| GTTGTTAGGTAACACAAGAG+TGG | - | chr1.4:73404406-73404425 | MS.gene60867:intron | 40.0% | |
| GTTTGAATCGTGGATGATGT+GGG | + | chr1.4:73401788-73401807 | None:intergenic | 40.0% | |
| TAACCACATGTAGCTTATGC+GGG | - | chr1.4:73401600-73401619 | MS.gene60867:CDS | 40.0% | |
| TACAAACCTCTGCAAAATGG+AGG | + | chr1.4:73401582-73401601 | None:intergenic | 40.0% | |
| TACAAGTGGCATACTTGAGT+CGG | - | chr1.4:73403314-73403333 | MS.gene60867:intron | 40.0% | |
| TATCCACTCTTCGGTTATTC+TGG | - | chr1.4:73402587-73402606 | MS.gene60867:CDS | 40.0% | |
| TCCGAAAATTGATCTACCGA+CGG | - | chr1.4:73405675-73405694 | MS.gene60867:intron | 40.0% | |
| TCTAATACGCGTCATACAAG+TGG | - | chr1.4:73403300-73403319 | MS.gene60867:intron | 40.0% | |
| TCTCTAAGCTATCCACTCTT+CGG | - | chr1.4:73402578-73402597 | MS.gene60867:CDS | 40.0% | |
| TCTTAGGAGTAAGCACAATG+GGG | + | chr1.4:73402482-73402501 | None:intergenic | 40.0% | |
| TGAAACCTAGGTATGTTGTC+GGG | - | chr1.4:73401759-73401778 | MS.gene60867:CDS | 40.0% | |
| TGAACTCCGTTCAAGAAGAT+AGG | + | chr1.4:73404828-73404847 | None:intergenic | 40.0% | |
| TGAATTCAAGTCATGTGTCG+CGG | + | chr1.4:73403438-73403457 | None:intergenic | 40.0% | |
| TGACATGCCACTGAATCTAT+TGG | - | chr1.4:73405732-73405751 | MS.gene60867:intron | 40.0% | |
| TGTCTTAGGAGTAAGCACAA+TGG | + | chr1.4:73402484-73402503 | None:intergenic | 40.0% | |
| TTACACTTACCATAGAAGGG+TGG | + | chr1.4:73402932-73402951 | None:intergenic | 40.0% | |
| TTAGGGCTCAAGAATGTGAT+TGG | + | chr1.4:73403706-73403725 | None:intergenic | 40.0% | |
| TTCAAGAACAGTGAACGTGT+TGG | + | chr1.4:73401996-73402015 | None:intergenic | 40.0% | |
| TTCTTGAACGGAGTTCAGAA+AGG | - | chr1.4:73404831-73404850 | MS.gene60867:intron | 40.0% | |
| TTTCCAGAGAATGGAGGAAA+AGG | - | chr1.4:73404882-73404901 | MS.gene60867:intron | 40.0% | |
| ! | ACCACCCATTTGAGATTAGA+CGG | - | chr1.4:73403556-73403575 | MS.gene60867:intron | 40.0% |
| ! | ACCGTCGGTAGATCAATTTT+CGG | + | chr1.4:73405679-73405698 | None:intergenic | 40.0% |
| ! | ATAGTACTGGAAGTCGAAAG+CGG | - | chr1.4:73404742-73404761 | MS.gene60867:intron | 40.0% |
| ! | CACTTCCGGAAACATTTTCT+TGG | - | chr1.4:73405758-73405777 | MS.gene60867:intron | 40.0% |
| ! | GAGGAAGATTTGGTAGAATC+TGG | + | chr1.4:73405609-73405628 | None:intergenic | 40.0% |
| ! | TCATTTTCCCTGTGCCTTTT+CGG | + | chr1.4:73405811-73405830 | None:intergenic | 40.0% |
| ! | TGGAAGATCATTGAGAGCAT+TGG | + | chr1.4:73405989-73406008 | None:intergenic | 40.0% |
| ! | TTAACACCTTTAGGAAGTCC+AGG | + | chr1.4:73404432-73404451 | None:intergenic | 40.0% |
| !! | ATGTGTCTAAGGAGTGTCTA+TGG | - | chr1.4:73403234-73403253 | MS.gene60867:intron | 40.0% |
| !! | GGATCTAAAGAGTGTTGCAA+AGG | - | chr1.4:73403335-73403354 | MS.gene60867:intron | 40.0% |
| !! | TTGCTTGCAAAAGTTGGTGA+AGG | - | chr1.4:73404486-73404505 | MS.gene60867:intron | 40.0% |
| AACCACATGTAGCTTATGCG+GGG | - | chr1.4:73401601-73401620 | MS.gene60867:CDS | 45.0% | |
| AACGTGTTGGAGGTTGCAAT+GGG | + | chr1.4:73401983-73402002 | None:intergenic | 45.0% | |
| AAGAACAGTGAACGTGTTGG+AGG | + | chr1.4:73401993-73402012 | None:intergenic | 45.0% | |
| ACTGATAAGAGGAGGTTCAG+TGG | + | chr1.4:73405102-73405121 | None:intergenic | 45.0% | |
| ACTGCTTCACGATTGTATCG+TGG | - | chr1.4:73401451-73401470 | MS.gene60867:CDS | 45.0% | |
| AGGTTCAGTGGTCGCAAAAT+TGG | + | chr1.4:73405090-73405109 | None:intergenic | 45.0% | |
| AGTGCATTTCGTGCTTTCGT+TGG | + | chr1.4:73402855-73402874 | None:intergenic | 45.0% | |
| ATGGGCCGTCTAATCTCAAA+TGG | + | chr1.4:73403564-73403583 | None:intergenic | 45.0% | |
| ATTCGCAATAGTTGCTTCCG+CGG | + | chr1.4:73405051-73405070 | None:intergenic | 45.0% | |
| CAGAGAGAAGAGAACTCTAC+TGG | + | chr1.4:73403770-73403789 | None:intergenic | 45.0% | |
| CATATGTCGAAAGACTAGGC+TGG | + | chr1.4:73405846-73405865 | None:intergenic | 45.0% | |
| GACACTCGTACGACACATAT+CGG | + | chr1.4:73403393-73403412 | None:intergenic | 45.0% | |
| GAGAGAAGAGAACTCTACTG+GGG | + | chr1.4:73403768-73403787 | None:intergenic | 45.0% | |
| GAGGTTGCAATGAGCAATGA+AGG | + | chr1.4:73401889-73401908 | None:intergenic | 45.0% | |
| GATATGTGTCGTACGAGTGT+CGG | - | chr1.4:73403392-73403411 | MS.gene60867:intron | 45.0% | |
| GCACAATTGCAGTTGCATTG+TGG | - | chr1.4:73401623-73401642 | MS.gene60867:CDS | 45.0% | |
| GGATAGCTTAGAGAGACAAG+TGG | + | chr1.4:73402572-73402591 | None:intergenic | 45.0% | |
| GGCAGTCGAAGTTTCAAACA+CGG | - | chr1.4:73403510-73403529 | MS.gene60867:intron | 45.0% | |
| GGTTCAGTGGTCGCAAAATT+GGG | + | chr1.4:73405089-73405108 | None:intergenic | 45.0% | |
| GGTTTGAATCGTGGATGATG+TGG | + | chr1.4:73401789-73401808 | None:intergenic | 45.0% | |
| GTACACTTGCAACCGCTATA+AGG | - | chr1.4:73402099-73402118 | MS.gene60867:intron | 45.0% | |
| GTTGTTTGTACCGCATAGCA+TGG | - | chr1.4:73402979-73402998 | MS.gene60867:CDS | 45.0% | |
| TAGCGGTTGCAAGTGTACTT+TGG | + | chr1.4:73402097-73402116 | None:intergenic | 45.0% | |
| TATATGCAGACCATCGTGGT+TGG | - | chr1.4:73402067-73402086 | MS.gene60867:intron | 45.0% | |
| TCAAGATGTTCCTGAAACCG+CGG | - | chr1.4:73405031-73405050 | MS.gene60867:intron | 45.0% | |
| TCCAGATGCACACCTTATAG+CGG | + | chr1.4:73402114-73402133 | None:intergenic | 45.0% | |
| TGCCAAAATCTTGACCACAC+TGG | - | chr1.4:73405907-73405926 | MS.gene60867:intron | 45.0% | |
| TGCGACTGCTATTGTCGTTA+TGG | - | chr1.4:73401512-73401531 | MS.gene60867:CDS | 45.0% | |
| TGGAACAGAAGAGGATGAGA+GGG | - | chr1.4:73404941-73404960 | MS.gene60867:intron | 45.0% | |
| TGGCACTTGCTTGCAAAAGT+TGG | - | chr1.4:73404480-73404499 | MS.gene60867:intron | 45.0% | |
| TGGGCCGTCTAATCTCAAAT+GGG | + | chr1.4:73403563-73403582 | None:intergenic | 45.0% | |
| TTACCATAGAAGGGTGGTGT+GGG | + | chr1.4:73402926-73402945 | None:intergenic | 45.0% | |
| TTCAAAGCCAGTCTCCGAAA+AGG | - | chr1.4:73405794-73405813 | MS.gene60867:intron | 45.0% | |
| TTCCTGTGTGATTACGGCTT+TGG | - | chr1.4:73404061-73404080 | MS.gene60867:intron | 45.0% | |
| TTGGAACAGAAGAGGATGAG+AGG | - | chr1.4:73404940-73404959 | MS.gene60867:intron | 45.0% | |
| ! | AAGAGTTTGCTTATGTCCGC+TGG | - | chr1.4:73404781-73404800 | MS.gene60867:intron | 45.0% |
| ! | AATGCATCGATGAAAGGGTG+AGG | + | chr1.4:73404522-73404541 | None:intergenic | 45.0% |
| ! | TGAGATCCTCCATTTTGCAG+AGG | - | chr1.4:73401573-73401592 | MS.gene60867:CDS | 45.0% |
| ! | TGCCAGTGTGGTCAAGATTT+TGG | + | chr1.4:73405912-73405931 | None:intergenic | 45.0% |
| AAGAACAGTGAACGCGTTGG+AGG | + | chr1.4:73401908-73401927 | None:intergenic | 50.0% | |
| AAGGGTTTCTGTTGGCAAGC+AGG | + | chr1.4:73403957-73403976 | None:intergenic | 50.0% | |
| AATCCCCCAATTAAGCGGCT+AGG | + | chr1.4:73401859-73401878 | None:intergenic | 50.0% | |
| ACAGAAGAGGATGAGAGGGA+AGG | - | chr1.4:73404945-73404964 | MS.gene60867:intron | 50.0% | |
| ACCGCTATAAGGTGTGCATC+TGG | - | chr1.4:73402110-73402129 | MS.gene60867:intron | 50.0% | |
| ACTCATCCTCAGCATTTGCC+AGG | - | chr1.4:73404579-73404598 | MS.gene60867:intron | 50.0% | |
| AGCCGCTTAATTGGGGGATT+TGG | - | chr1.4:73401859-73401878 | MS.gene60867:intron | 50.0% | |
| ATAGTTGCTTCCGCGGTTTC+AGG | + | chr1.4:73405044-73405063 | None:intergenic | 50.0% | |
| ATCCATGCTTCAGGCCCATT+GGG | - | chr1.4:73401941-73401960 | MS.gene60867:intron | 50.0% | |
| ATCCCCCAATTAAGCGGCTA+GGG | + | chr1.4:73401858-73401877 | None:intergenic | 50.0% | |
| CAAGCTCTACATTGCCAGTG+TGG | + | chr1.4:73405924-73405943 | None:intergenic | 50.0% | |
| CAGAAGAGGATGAGAGGGAA+GGG | - | chr1.4:73404946-73404965 | MS.gene60867:intron | 50.0% | |
| CAGCAGCAGCAAGCCATATT+GGG | - | chr1.4:73404996-73405015 | MS.gene60867:intron | 50.0% | |
| CATCCACGATTCAAACCCGT+TGG | - | chr1.4:73401792-73401811 | MS.gene60867:CDS | 50.0% | |
| CCAACGCGTTCACTGTTCTT+GGG | - | chr1.4:73401908-73401927 | MS.gene60867:intron | 50.0% | |
| CGAAAGCGGCGAAGAATATG+TGG | - | chr1.4:73404756-73404775 | MS.gene60867:intron | 50.0% | |
| CGACCAGAATAACCGAAGAG+TGG | + | chr1.4:73402593-73402612 | None:intergenic | 50.0% | |
| CTAGGGCCGAATCAGAATGA+AGG | + | chr1.4:73401841-73401860 | None:intergenic | 50.0% | |
| CTCCAAAGCCGTAATCACAC+AGG | + | chr1.4:73404066-73404085 | None:intergenic | 50.0% | |
| CTTACCATAGAAGGGTGGTG+TGG | + | chr1.4:73402927-73402946 | None:intergenic | 50.0% | |
| GAACGTGTTGGAGGTTGCAA+TGG | + | chr1.4:73401984-73402003 | None:intergenic | 50.0% | |
| GCCGTCTAATCTCAAATGGG+TGG | + | chr1.4:73403560-73403579 | None:intergenic | 50.0% | |
| GCCTGAAGCATGGATGATGT+GGG | + | chr1.4:73401936-73401955 | None:intergenic | 50.0% | |
| GGAATCCCGACAACATACCT+AGG | + | chr1.4:73401767-73401786 | None:intergenic | 50.0% | |
| GTCGATGACATTCGTCAGGT+TGG | - | chr1.4:73402609-73402628 | MS.gene60867:CDS | 50.0% | |
| TAGGTAACACAAGAGTGGCC+TGG | - | chr1.4:73404411-73404430 | MS.gene60867:intron | 50.0% | |
| TATCCACCTGGCAAATGCTG+AGG | + | chr1.4:73404588-73404607 | None:intergenic | 50.0% | |
| TCCAACGCGTTCACTGTTCT+TGG | - | chr1.4:73401907-73401926 | MS.gene60867:intron | 50.0% | |
| TCCCACATCATCCATGCTTC+AGG | - | chr1.4:73401932-73401951 | MS.gene60867:intron | 50.0% | |
| TCTGGTCGATGACATTCGTC+AGG | - | chr1.4:73402605-73402624 | MS.gene60867:CDS | 50.0% | |
| TTGACAATTAGGGCACGCTC+TGG | + | chr1.4:73402171-73402190 | None:intergenic | 50.0% | |
| TTGCAGTTGCATTGTGGTCG+TGG | - | chr1.4:73401629-73401648 | MS.gene60867:CDS | 50.0% | |
| TTTCCCACACCACCCTTCTA+TGG | - | chr1.4:73402920-73402939 | MS.gene60867:CDS | 50.0% | |
| TTTCTGTTGGCAAGCAGGCA+AGG | + | chr1.4:73403952-73403971 | None:intergenic | 50.0% | |
| ! | AGTCCAACGGGTTTGAATCG+TGG | + | chr1.4:73401798-73401817 | None:intergenic | 50.0% |
| ! | GCACCTTTTCCTCCATTCTC+TGG | + | chr1.4:73404888-73404907 | None:intergenic | 50.0% |
| ! | TCTTTCCAGTCTTGTGCCAG+CGG | + | chr1.4:73404800-73404819 | None:intergenic | 50.0% |
| ATGCAGACCATCGTGGTTGG+TGG | - | chr1.4:73402070-73402089 | MS.gene60867:intron | 55.0% | |
| ATGTGTCGCGGTGTCTGACA+TGG | + | chr1.4:73403426-73403445 | None:intergenic | 55.0% | |
| CAATTAGGGCACGCTCTGGT+AGG | + | chr1.4:73402167-73402186 | None:intergenic | 55.0% | |
| CATCCATGCTTCAGGCCCAT+TGG | - | chr1.4:73401940-73401959 | MS.gene60867:intron | 55.0% | |
| CATCCTCAGCATTTGCCAGG+TGG | - | chr1.4:73404582-73404601 | MS.gene60867:intron | 55.0% | |
| CCAGCAGCAGCAAGCCATAT+TGG | - | chr1.4:73404995-73405014 | MS.gene60867:intron | 55.0% | |
| CCCAAGAACAGTGAACGCGT+TGG | + | chr1.4:73401911-73401930 | None:intergenic | 55.0% | |
| CTTTGGTCCACCAACCACGA+TGG | + | chr1.4:73402080-73402099 | None:intergenic | 55.0% | |
| GAGTGGCCTGGACTTCCTAA+AGG | - | chr1.4:73404423-73404442 | MS.gene60867:intron | 55.0% | |
| GGCCTGAAGCATGGATGATG+TGG | + | chr1.4:73401937-73401956 | None:intergenic | 55.0% | |
| TATGTCCGCTGGCACAAGAC+TGG | - | chr1.4:73404792-73404811 | MS.gene60867:intron | 55.0% | |
| TCGGCCCTAGCCGCTTAATT+GGG | - | chr1.4:73401851-73401870 | MS.gene60867:intron | 55.0% | |
| TGCCCCGCATAAGCTACATG+TGG | + | chr1.4:73401606-73401625 | None:intergenic | 55.0% | |
| TGTGTCGCGGTGTCTGACAT+GGG | + | chr1.4:73403425-73403444 | None:intergenic | 55.0% | |
| TTCGGCCCTAGCCGCTTAAT+TGG | - | chr1.4:73401850-73401869 | MS.gene60867:intron | 55.0% | |
| ! | CCAGTCTCCGAAAAGGCACA+GGG | - | chr1.4:73405801-73405820 | MS.gene60867:intron | 55.0% |
| !! | CCAATATGGCTTGCTGCTGC+TGG | + | chr1.4:73404998-73405017 | None:intergenic | 55.0% |
| CAATGGGCCGCCTCACACTT+GGG | + | chr1.4:73401967-73401986 | None:intergenic | 60.0% | |
| CATTGGGCCCAAGTGTGAGG+CGG | - | chr1.4:73401957-73401976 | MS.gene60867:intron | 60.0% | |
| CGGCCCTAGCCGCTTAATTG+GGG | - | chr1.4:73401852-73401871 | MS.gene60867:intron | 60.0% | |
| GCCTCACACTTGGGCCCAAT+GGG | + | chr1.4:73401958-73401977 | None:intergenic | 60.0% | |
| GGCCCTAGCCGCTTAATTGG+GGG | - | chr1.4:73401853-73401872 | MS.gene60867:intron | 60.0% | |
| ! | CCCTGTGCCTTTTCGGAGAC+TGG | + | chr1.4:73405804-73405823 | None:intergenic | 60.0% |
| ! | GCCAGTCTCCGAAAAGGCAC+AGG | - | chr1.4:73405800-73405819 | MS.gene60867:intron | 60.0% |
| CGCCTCACACTTGGGCCCAA+TGG | + | chr1.4:73401959-73401978 | None:intergenic | 65.0% | |
| GCAATGGGCCGCCTCACACT+TGG | + | chr1.4:73401968-73401987 | None:intergenic | 65.0% | |
| GCCCATTGGGCCCAAGTGTG+AGG | - | chr1.4:73401954-73401973 | MS.gene60867:intron | 65.0% | |
| GGCCCAATGGGCCTGAAGCA+TGG | + | chr1.4:73401946-73401965 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 73401448 | 73406017 | 73401448 | ID=MS.gene60867 |
| chr1.4 | mRNA | 73401448 | 73406017 | 73401448 | ID=MS.gene60867.t1;Parent=MS.gene60867 |
| chr1.4 | exon | 73405993 | 73406017 | 73405993 | ID=MS.gene60867.t1.exon1;Parent=MS.gene60867.t1 |
| chr1.4 | CDS | 73405993 | 73406017 | 73405993 | ID=cds.MS.gene60867.t1;Parent=MS.gene60867.t1 |
| chr1.4 | exon | 73405871 | 73405898 | 73405871 | ID=MS.gene60867.t1.exon2;Parent=MS.gene60867.t1 |
| chr1.4 | CDS | 73405871 | 73405898 | 73405871 | ID=cds.MS.gene60867.t1;Parent=MS.gene60867.t1 |
| chr1.4 | exon | 73405254 | 73405389 | 73405254 | ID=MS.gene60867.t1.exon3;Parent=MS.gene60867.t1 |
| chr1.4 | CDS | 73405254 | 73405389 | 73405254 | ID=cds.MS.gene60867.t1;Parent=MS.gene60867.t1 |
| chr1.4 | exon | 73402865 | 73403051 | 73402865 | ID=MS.gene60867.t1.exon4;Parent=MS.gene60867.t1 |
| chr1.4 | CDS | 73402865 | 73403051 | 73402865 | ID=cds.MS.gene60867.t1;Parent=MS.gene60867.t1 |
| chr1.4 | exon | 73402299 | 73402777 | 73402299 | ID=MS.gene60867.t1.exon5;Parent=MS.gene60867.t1 |
| chr1.4 | CDS | 73402299 | 73402777 | 73402299 | ID=cds.MS.gene60867.t1;Parent=MS.gene60867.t1 |
| chr1.4 | exon | 73401448 | 73401855 | 73401448 | ID=MS.gene60867.t1.exon6;Parent=MS.gene60867.t1 |
| chr1.4 | CDS | 73401448 | 73401855 | 73401448 | ID=cds.MS.gene60867.t1;Parent=MS.gene60867.t1 |
| Gene Sequence |
| Protein sequence |
