Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60868.t1 | XP_003591828.2 | 84.3 | 489 | 29 | 2 | 1 | 449 | 1 | 481 | 4.60E-219 | 770.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60868.t1 | Q6NQK2 | 48.7 | 485 | 170 | 9 | 4 | 447 | 2 | 448 | 7.0e-115 | 415.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60868.t1 | G7I498 | 84.3 | 489 | 29 | 2 | 1 | 449 | 1 | 481 | 3.3e-219 | 770.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene60868.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60868.t1 | MTR_1g093680 | 85.072 | 489 | 25 | 2 | 1 | 449 | 1 | 481 | 0.0 | 846 |
| MS.gene60868.t1 | MTR_5g053430 | 61.134 | 476 | 118 | 6 | 4 | 448 | 2 | 441 | 0.0 | 558 |
| MS.gene60868.t1 | MTR_5g053430 | 61.345 | 476 | 120 | 6 | 4 | 448 | 2 | 444 | 0.0 | 558 |
| MS.gene60868.t1 | MTR_1g093670 | 60.494 | 405 | 92 | 7 | 41 | 443 | 6 | 344 | 3.12e-156 | 446 |
| MS.gene60868.t1 | MTR_7g033320 | 56.075 | 214 | 92 | 1 | 8 | 219 | 5 | 218 | 1.62e-83 | 265 |
| MS.gene60868.t1 | MTR_8g102240 | 59.162 | 191 | 68 | 4 | 36 | 218 | 27 | 215 | 8.77e-74 | 239 |
| MS.gene60868.t1 | MTR_8g102240 | 59.162 | 191 | 68 | 4 | 36 | 218 | 27 | 215 | 8.99e-74 | 239 |
| MS.gene60868.t1 | MTR_2g014680 | 53.363 | 223 | 101 | 2 | 32 | 251 | 25 | 247 | 1.62e-73 | 233 |
| MS.gene60868.t1 | MTR_4g088245 | 58.115 | 191 | 77 | 2 | 36 | 223 | 44 | 234 | 4.11e-71 | 228 |
| MS.gene60868.t1 | MTR_8g069160 | 58.333 | 180 | 72 | 2 | 36 | 212 | 44 | 223 | 1.91e-67 | 216 |
| MS.gene60868.t1 | MTR_4g078875 | 55.729 | 192 | 80 | 2 | 37 | 223 | 24 | 215 | 2.02e-67 | 217 |
| MS.gene60868.t1 | MTR_2g090735 | 57.068 | 191 | 78 | 2 | 37 | 223 | 25 | 215 | 3.28e-63 | 206 |
| MS.gene60868.t1 | MTR_4g089135 | 33.537 | 164 | 85 | 8 | 56 | 213 | 13 | 158 | 8.46e-12 | 66.6 |
| MS.gene60868.t1 | MTR_2g080010 | 34.177 | 158 | 79 | 9 | 47 | 198 | 5 | 143 | 1.13e-11 | 66.2 |
| MS.gene60868.t1 | MTR_8g059170 | 34.043 | 141 | 77 | 6 | 58 | 197 | 14 | 139 | 2.54e-11 | 65.1 |
| MS.gene60868.t1 | MTR_3g088110 | 34.722 | 144 | 73 | 7 | 58 | 198 | 7 | 132 | 4.47e-11 | 63.9 |
| MS.gene60868.t1 | MTR_1g008740 | 29.825 | 171 | 98 | 7 | 58 | 221 | 13 | 168 | 9.95e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60868.t1 | AT1G25580 | 50.513 | 487 | 158 | 12 | 4 | 447 | 2 | 448 | 5.45e-147 | 427 |
| MS.gene60868.t1 | AT3G01600 | 55.556 | 225 | 95 | 3 | 7 | 229 | 4 | 225 | 4.09e-81 | 255 |
| MS.gene60868.t1 | AT5G14490 | 49.603 | 252 | 118 | 3 | 1 | 250 | 1 | 245 | 6.32e-78 | 246 |
| MS.gene60868.t1 | AT5G14490 | 50.000 | 246 | 114 | 3 | 7 | 250 | 4 | 242 | 1.21e-77 | 243 |
| MS.gene60868.t1 | AT5G14490 | 50.000 | 246 | 114 | 3 | 7 | 250 | 4 | 242 | 1.35e-77 | 245 |
| MS.gene60868.t1 | AT5G14490 | 49.603 | 252 | 118 | 3 | 1 | 250 | 1 | 245 | 1.62e-77 | 246 |
| MS.gene60868.t1 | AT4G29230 | 58.333 | 192 | 69 | 3 | 36 | 218 | 28 | 217 | 4.46e-76 | 244 |
| MS.gene60868.t1 | AT4G29230 | 58.333 | 192 | 69 | 3 | 36 | 218 | 28 | 217 | 1.99e-75 | 244 |
| MS.gene60868.t1 | AT4G29230 | 57.812 | 192 | 69 | 3 | 36 | 218 | 28 | 216 | 1.35e-74 | 242 |
| MS.gene60868.t1 | AT1G28470 | 53.110 | 209 | 92 | 2 | 21 | 223 | 35 | 243 | 5.50e-71 | 227 |
| MS.gene60868.t1 | AT5G56620 | 54.592 | 196 | 74 | 4 | 36 | 218 | 22 | 215 | 4.11e-69 | 226 |
| MS.gene60868.t1 | AT5G56620 | 54.592 | 196 | 74 | 4 | 36 | 218 | 22 | 215 | 4.86e-69 | 225 |
| MS.gene60868.t1 | AT5G56620 | 54.592 | 196 | 74 | 4 | 36 | 218 | 22 | 215 | 7.28e-69 | 224 |
| MS.gene60868.t1 | AT4G28500 | 54.450 | 191 | 83 | 2 | 37 | 223 | 36 | 226 | 2.68e-67 | 217 |
| MS.gene60868.t1 | AT1G01720 | 36.111 | 144 | 71 | 7 | 58 | 198 | 7 | 132 | 9.46e-13 | 68.9 |
| MS.gene60868.t1 | AT1G33060 | 30.588 | 170 | 90 | 8 | 57 | 216 | 23 | 174 | 5.49e-11 | 65.1 |
| MS.gene60868.t1 | AT1G33060 | 30.588 | 170 | 90 | 8 | 57 | 216 | 23 | 174 | 6.24e-11 | 65.1 |
| MS.gene60868.t1 | AT1G02230 | 29.825 | 171 | 96 | 8 | 59 | 222 | 4 | 157 | 6.78e-11 | 63.9 |
Find 97 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATATGTGGTCAAGATTT+TGG | 0.149918 | 1.4:-73416699 | MS.gene60868:CDS |
| CAGTGTCAAGGTTGAGATTT+TGG | 0.158446 | 1.4:+73415274 | None:intergenic |
| ATTTATCACTACTCTTAAAA+TGG | 0.223272 | 1.4:-73416925 | MS.gene60868:CDS |
| CTTTCTGTATATGCTCATTT+AGG | 0.224428 | 1.4:-73415426 | MS.gene60868:CDS |
| CCAGCAGCAGCAAGCCAAAT+TGG | 0.225006 | 1.4:-73416472 | MS.gene60868:CDS |
| TCGATAACATGTTGACAATT+TGG | 0.240409 | 1.4:+73419070 | None:intergenic |
| CCGAGGTTTCAGGAACATTT+TGG | 0.262495 | 1.4:+73416436 | None:intergenic |
| ACAGTTGCTTCCGAGGTTTC+AGG | 0.268678 | 1.4:+73416426 | None:intergenic |
| CTTTCGGCTTCCAGTATTAT+AGG | 0.275483 | 1.4:+73416728 | None:intergenic |
| TATGATGAGATTCTTGTTCT+TGG | 0.289036 | 1.4:+73416325 | None:intergenic |
| CGATAACATGTTGACAATTT+GGG | 0.296736 | 1.4:+73419071 | None:intergenic |
| CAGTGTCAGCGTCAAGATTA+AGG | 0.322174 | 1.4:+73415322 | None:intergenic |
| CATCTGATCAAGAGATAATA+TGG | 0.323541 | 1.4:-73417004 | MS.gene60868:CDS |
| GCAATCAAAGCCTATAATAC+TGG | 0.327546 | 1.4:-73416738 | MS.gene60868:CDS |
| CTCTCCCTTATGGCTACGTC+TGG | 0.329947 | 1.4:-73420141 | None:intergenic |
| TTCTCATTGCGAGGAGGTTC+AGG | 0.331317 | 1.4:+73416366 | None:intergenic |
| TATAGGCTTTGATTGCTCTA+TGG | 0.349409 | 1.4:+73416745 | None:intergenic |
| AGGTTCAGGCGTCACGGAAT+TGG | 0.365916 | 1.4:+73416380 | None:intergenic |
| GAGGATAGGTTTAGTCCTTC+CGG | 0.373927 | 1.4:+73416656 | None:intergenic |
| AGATTCTACCAGATCTTTCT+CGG | 0.381982 | 1.4:-73415674 | MS.gene60868:CDS |
| GGTTCAGGCGTCACGGAATT+GGG | 0.400382 | 1.4:+73416381 | None:intergenic |
| GAAAAGCTGAGAAAACTAAC+TGG | 0.402325 | 1.4:-73416569 | MS.gene60868:CDS |
| CCAATTTGGCTTGCTGCTGC+TGG | 0.410429 | 1.4:+73416472 | None:intergenic |
| CAGATCTTTCTCGGTTAGAA+TGG | 0.419534 | 1.4:-73415665 | MS.gene60868:CDS |
| CGACATTCGATTAAGTCAAC+TGG | 0.441693 | 1.4:-73415223 | MS.gene60868:intron |
| TGGAACAGAAGAGGATGAAA+AGG | 0.444567 | 1.4:-73416526 | MS.gene60868:CDS |
| ATAGAAACTCAAACTAATGA+AGG | 0.445370 | 1.4:-73415588 | MS.gene60868:CDS |
| CAGCAGCAGCAAGCCAAATT+GGG | 0.449148 | 1.4:-73416471 | MS.gene60868:CDS |
| AGAATGGCTACTTGAAAGTC+AGG | 0.455673 | 1.4:-73415649 | MS.gene60868:CDS |
| TGGGGAAAACGGAGAGCAAA+TGG | 0.462093 | 1.4:-73415460 | MS.gene60868:CDS |
| TTCAGAGCCAGTCTCCGAAA+AGG | 0.466169 | 1.4:-73415485 | MS.gene60868:CDS |
| CATCCTCTTCTGTTCCAAGA+TGG | 0.472200 | 1.4:+73416532 | None:intergenic |
| TTGACAATTTGGGCAAGCTC+TGG | 0.472858 | 1.4:+73419081 | None:intergenic |
| CGTCGTGGTTGGTGGACAAA+AGG | 0.474826 | 1.4:-73419171 | MS.gene60868:CDS |
| CTAAACCTATCCTCTTGAAC+GGG | 0.489073 | 1.4:-73416647 | MS.gene60868:CDS |
| GCCAGTCTCCGAAAAGGGAT+GGG | 0.491139 | 1.4:-73415479 | MS.gene60868:CDS |
| GGAAGCAACTGTTATAAAAG+TGG | 0.494051 | 1.4:-73416415 | MS.gene60868:CDS |
| CATTCTAACCGAGAAAGATC+TGG | 0.494095 | 1.4:+73415666 | None:intergenic |
| ACTCATCCTCAGCGTTTACC+AGG | 0.499467 | 1.4:-73416885 | MS.gene60868:intron |
| TAAATTCATCGATGAATGGA+TGG | 0.502555 | 1.4:+73416943 | None:intergenic |
| AATTCAATAAATTCTGCGAC+AGG | 0.503431 | 1.4:+73415550 | None:intergenic |
| AATGTAGGTGTTTCGCGAGA+TGG | 0.508052 | 1.4:-73416786 | MS.gene60868:intron |
| CTGAAAGAAATCTGCGAACA+AGG | 0.508582 | 1.4:+73415503 | None:intergenic |
| GACGTCCGCTGGCACAAGAC+CGG | 0.509302 | 1.4:-73416675 | MS.gene60868:CDS |
| GTTATGCATCAATACCATCT+TGG | 0.511788 | 1.4:-73416546 | MS.gene60868:CDS |
| ATGTAGACCGTCGTGGTTGG+TGG | 0.513068 | 1.4:-73419179 | MS.gene60868:intron |
| TTAACACCTCTAGGTAATCC+AGG | 0.513694 | 1.4:+73417035 | None:intergenic |
| CCGAAAAGGGATGGGGAAAA+CGG | 0.514006 | 1.4:-73415471 | MS.gene60868:CDS |
| ACTACTCTTAAAATGGATGA+TGG | 0.516095 | 1.4:-73416918 | MS.gene60868:CDS |
| TCAGAGCCAGTCTCCGAAAA+GGG | 0.517995 | 1.4:-73415484 | MS.gene60868:CDS |
| CACAGGATAGCTACATTGCG+TGG | 0.526226 | 1.4:-73415084 | MS.gene60868:CDS |
| GTGATAAATTCATCGATGAA+TGG | 0.527452 | 1.4:+73416939 | None:intergenic |
| CCAAAATGTTCCTGAAACCT+CGG | 0.528119 | 1.4:-73416436 | MS.gene60868:CDS |
| ACAGAAGAGGATGAAAAGGA+TGG | 0.529217 | 1.4:-73416522 | MS.gene60868:CDS |
| TAGGTAACACAAGAGTGGCC+TGG | 0.532893 | 1.4:-73417053 | MS.gene60868:CDS |
| AGCCAGTCTCCGAAAAGGGA+TGG | 0.533326 | 1.4:-73415480 | MS.gene60868:CDS |
| CATATTATCTCTTGATCAGA+TGG | 0.535616 | 1.4:+73417005 | None:intergenic |
| TTAATAGGAATTCAGCTCAC+AGG | 0.535810 | 1.4:-73415101 | MS.gene60868:intron |
| TGGCACTTGCTTGCAAAAGT+TGG | 0.539348 | 1.4:-73416984 | MS.gene60868:CDS |
| TAGAAACTCAAACTAATGAA+GGG | 0.541977 | 1.4:-73415587 | MS.gene60868:CDS |
| AGAATCTCATCATAGTCCTC+AGG | 0.542768 | 1.4:-73416316 | MS.gene60868:intron |
| TCCTTCCGGTCTTGTGCCAG+CGG | 0.547113 | 1.4:+73416670 | None:intergenic |
| CTTTCTGAAGCCCGTTCAAG+AGG | 0.552172 | 1.4:+73416637 | None:intergenic |
| GCTCTACATTTGCAGTGTCA+AGG | 0.556566 | 1.4:+73415262 | None:intergenic |
| CTCTTGAACGGGCTTCAGAA+AGG | 0.560131 | 1.4:-73416636 | MS.gene60868:CDS |
| AAATTCATCGATGAATGGAT+GGG | 0.565244 | 1.4:+73416944 | None:intergenic |
| TGAAGCCCGTTCAAGAGGAT+AGG | 0.565498 | 1.4:+73416642 | None:intergenic |
| GTCACGGAATTGGGAGTGAC+TGG | 0.565831 | 1.4:+73416390 | None:intergenic |
| CAATTTGGGCAAGCTCTGGT+AGG | 0.567523 | 1.4:+73419085 | None:intergenic |
| ACAGGATAGCTACATTGCGT+GGG | 0.570733 | 1.4:-73415083 | MS.gene60868:CDS |
| GGATCAAATTTAACACCTCT+AGG | 0.573417 | 1.4:+73417026 | None:intergenic |
| TTGCTTGCAAAAGTTGGTGA+AGG | 0.575602 | 1.4:-73416978 | MS.gene60868:CDS |
| CCAGTCTCCGAAAAGGGATG+GGG | 0.581156 | 1.4:-73415478 | MS.gene60868:CDS |
| TCTCCCTTATGGCTACGTCT+GGG | 0.581507 | 1.4:-73420140 | None:intergenic |
| GAACATTGCTTCTCATTGCG+AGG | 0.584286 | 1.4:+73416357 | None:intergenic |
| ACTAAACCTATCCTCTTGAA+CGG | 0.585397 | 1.4:-73416648 | MS.gene60868:CDS |
| CTTGTATATGTAGACCGTCG+TGG | 0.591109 | 1.4:-73419186 | MS.gene60868:intron |
| CTTTATATGACTCCAGAGAG+TGG | 0.599269 | 1.4:-73416594 | MS.gene60868:CDS |
| TCCGCTGGCACAAGACCGGA+AGG | 0.600544 | 1.4:-73416671 | MS.gene60868:CDS |
| GCGAGGAGGTTCAGGCGTCA+CGG | 0.600720 | 1.4:+73416374 | None:intergenic |
| AATTCACAGCAACTTGCGGA+AGG | 0.600786 | 1.4:-73415531 | MS.gene60868:CDS |
| TGACTTAATCGAATGTCGGA+AGG | 0.609614 | 1.4:+73415228 | None:intergenic |
| CAGTTGACTTAATCGAATGT+CGG | 0.615405 | 1.4:+73415224 | None:intergenic |
| TATATGTAGACCGTCGTGGT+TGG | 0.621640 | 1.4:-73419182 | MS.gene60868:intron |
| AATTCATCGATGAATGGATG+GGG | 0.621875 | 1.4:+73416945 | None:intergenic |
| CATTGCTTCTCATTGCGAGG+AGG | 0.622091 | 1.4:+73416360 | None:intergenic |
| ATTGAATTCACAGCAACTTG+CGG | 0.627276 | 1.4:-73415535 | MS.gene60868:CDS |
| GTTGTTAGGTAACACAAGAG+TGG | 0.628897 | 1.4:-73417058 | MS.gene60868:intron |
| AAAAGCTGAGAAAACTAACT+GGG | 0.630819 | 1.4:-73416568 | MS.gene60868:CDS |
| ATACCATCTTGGAACAGAAG+AGG | 0.631271 | 1.4:-73416535 | MS.gene60868:CDS |
| AGAAACTCAAACTAATGAAG+GGG | 0.644054 | 1.4:-73415586 | MS.gene60868:CDS |
| TGAGCATATACAGAAAGACT+AGG | 0.654781 | 1.4:+73415432 | None:intergenic |
| CAGGATAGCTACATTGCGTG+GGG | 0.676657 | 1.4:-73415082 | MS.gene60868:CDS |
| GATAGCTACATTGCGTGGGG+TGG | 0.677045 | 1.4:-73415079 | MS.gene60868:CDS |
| GAGTGGCCTGGATTACCTAG+AGG | 0.709350 | 1.4:-73417041 | MS.gene60868:CDS |
| AGTCCACCTGGTAAACGCTG+AGG | 0.726794 | 1.4:+73416879 | None:intergenic |
| TATATGACTCCAGAGAGTGG+AGG | 0.733666 | 1.4:-73416591 | MS.gene60868:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAATGAATTTAATGTAA+TGG | + | chr1.4:73420019-73420038 | None:intergenic | 10.0% |
| !!! | AATTCAATTTGAAATTAAAA+TGG | + | chr1.4:73415330-73415349 | None:intergenic | 10.0% |
| !!! | TTAATTTCAAATTGAATTTT+TGG | - | chr1.4:73415332-73415351 | MS.gene60868:CDS | 10.0% |
| !! | AATCATTAAGAATTATTTAG+AGG | - | chr1.4:73417470-73417489 | MS.gene60868:intron | 15.0% |
| !! | ATCAAAAAAAAATTAAGTGT+TGG | - | chr1.4:73417616-73417635 | MS.gene60868:intron | 15.0% |
| !! | TTAAGAATTTATTTCAATGA+AGG | + | chr1.4:73419283-73419302 | None:intergenic | 15.0% |
| !!! | AATAAAGCAAATAATTTTGA+AGG | + | chr1.4:73415284-73415303 | None:intergenic | 15.0% |
| !!! | ATCTTTTTCTTAATTTCAAA+TGG | - | chr1.4:73415126-73415145 | MS.gene60868:intron | 15.0% |
| !!! | GAAATATGTTATTTAATTTC+TGG | - | chr1.4:73417774-73417793 | MS.gene60868:intron | 15.0% |
| !!! | GCTTGTTTTTTTTTTTTAAT+AGG | - | chr1.4:73420076-73420095 | MS.gene60868:intron | 15.0% |
| !!! | TATATATCAGTGATATTTTA+TGG | - | chr1.4:73416349-73416368 | MS.gene60868:CDS | 15.0% |
| !!! | TCTTTTTCTTAATTTCAAAT+GGG | - | chr1.4:73415127-73415146 | MS.gene60868:intron | 15.0% |
| !! | AAAGCTGGTATTAAAAAATA+AGG | + | chr1.4:73419374-73419393 | None:intergenic | 20.0% |
| !! | AAGAACAAAATTATCAACAT+AGG | + | chr1.4:73419480-73419499 | None:intergenic | 20.0% |
| !! | AATAAATTCAACTTATGATG+GGG | + | chr1.4:73416904-73416923 | None:intergenic | 20.0% |
| !! | AATTCGTATGTGTTTAAATT+TGG | - | chr1.4:73419411-73419430 | MS.gene60868:intron | 20.0% |
| !! | AATTGGTAAAACTAATCAAA+GGG | + | chr1.4:73415871-73415890 | None:intergenic | 20.0% |
| !! | AGTTTATTGTTCAATAGATA+CGG | - | chr1.4:73415367-73415386 | MS.gene60868:CDS | 20.0% |
| !! | ATAAGAAAATTAAGACAAGT+AGG | + | chr1.4:73416299-73416318 | None:intergenic | 20.0% |
| !! | ATTAATGCACAAAGAATATA+TGG | + | chr1.4:73417673-73417692 | None:intergenic | 20.0% |
| !! | ATTTATCACTACTCTTAAAA+TGG | - | chr1.4:73418267-73418286 | MS.gene60868:intron | 20.0% |
| !! | CAATAAATTCAACTTATGAT+GGG | + | chr1.4:73416905-73416924 | None:intergenic | 20.0% |
| !! | CTTTGAATCAAATACATTAA+AGG | - | chr1.4:73417505-73417524 | MS.gene60868:intron | 20.0% |
| !! | GCTATATGATTATAAAATGT+AGG | - | chr1.4:73418391-73418410 | MS.gene60868:intron | 20.0% |
| !! | TCAATAAATTCAACTTATGA+TGG | + | chr1.4:73416906-73416925 | None:intergenic | 20.0% |
| !! | TCATTATATGAGTTTAATAG+TGG | - | chr1.4:73415247-73415266 | MS.gene60868:CDS | 20.0% |
| !! | TCTATCATTATGTAAACAAT+AGG | + | chr1.4:73416661-73416680 | None:intergenic | 20.0% |
| !!! | AAAAATGCCAATAAACTTTT+AGG | + | chr1.4:73418017-73418036 | None:intergenic | 20.0% |
| !!! | AAGTTGATATTTATTTGATG+TGG | - | chr1.4:73419223-73419242 | MS.gene60868:intron | 20.0% |
| !!! | AATGAATTTAATGTAATGGA+AGG | + | chr1.4:73420015-73420034 | None:intergenic | 20.0% |
| !!! | TATGTTATTTAATTTCTGGA+AGG | - | chr1.4:73417778-73417797 | MS.gene60868:intron | 20.0% |
| !!! | TGCTTTATTTATTATAGAGA+AGG | - | chr1.4:73415217-73415236 | MS.gene60868:intron | 20.0% |
| !!! | TTCCAAATATTTAATTTACC+CGG | - | chr1.4:73419145-73419164 | MS.gene60868:CDS | 20.0% |
| !!! | TTTCAAAGTTTTATGTTGTT+AGG | - | chr1.4:73418120-73418139 | MS.gene60868:intron | 20.0% |
| ! | AACCGGGTAAATTAAATATT+TGG | + | chr1.4:73419150-73419169 | None:intergenic | 25.0% |
| ! | ACTATATACAAGACATCAAT+CGG | - | chr1.4:73417866-73417885 | MS.gene60868:intron | 25.0% |
| ! | AGTATCACTGTTATAAAAAC+AGG | + | chr1.4:73417964-73417983 | None:intergenic | 25.0% |
| ! | ATAGAAACTCAAACTAATGA+AGG | - | chr1.4:73419604-73419623 | MS.gene60868:intron | 25.0% |
| ! | ATCAGCATAATTCATTAAAC+CGG | + | chr1.4:73419167-73419186 | None:intergenic | 25.0% |
| ! | ATGAGAAAGTAATTGATTGT+TGG | - | chr1.4:73417569-73417588 | MS.gene60868:intron | 25.0% |
| ! | ATGTAGAAGTAAAACATGTT+TGG | + | chr1.4:73415774-73415793 | None:intergenic | 25.0% |
| ! | ATTGGTAAAACTAATCAAAG+GGG | + | chr1.4:73415870-73415889 | None:intergenic | 25.0% |
| ! | ATTTGTATCGTTCAATTTCT+TGG | - | chr1.4:73417716-73417735 | MS.gene60868:intron | 25.0% |
| ! | CAATTACTTTCTCATTCATA+GGG | + | chr1.4:73417564-73417583 | None:intergenic | 25.0% |
| ! | CAATTGGTAAAACTAATCAA+AGG | + | chr1.4:73415872-73415891 | None:intergenic | 25.0% |
| ! | CATCACAAATAGAGAAAATT+TGG | + | chr1.4:73420052-73420071 | None:intergenic | 25.0% |
| ! | CATTATAGTAGATTCAACTA+AGG | + | chr1.4:73416459-73416478 | None:intergenic | 25.0% |
| ! | CTATAATGAAAGAAAAAGTG+AGG | - | chr1.4:73416471-73416490 | MS.gene60868:CDS | 25.0% |
| ! | CTATTGATCTATCACTTATT+TGG | + | chr1.4:73417413-73417432 | None:intergenic | 25.0% |
| ! | GTATCACTGTTATAAAAACA+GGG | + | chr1.4:73417963-73417982 | None:intergenic | 25.0% |
| ! | TAAAGAAATTCAAAAAAGCG+AGG | + | chr1.4:73415176-73415195 | None:intergenic | 25.0% |
| ! | TAGAAACTCAAACTAATGAA+GGG | - | chr1.4:73419605-73419624 | MS.gene60868:intron | 25.0% |
| ! | TATCGTGTATTACATCAAAT+GGG | + | chr1.4:73417333-73417352 | None:intergenic | 25.0% |
| ! | TCAATTACTTTCTCATTCAT+AGG | + | chr1.4:73417565-73417584 | None:intergenic | 25.0% |
| ! | TTAGAAATCTCATAATCAGA+AGG | + | chr1.4:73415743-73415762 | None:intergenic | 25.0% |
| ! | TTGATATTTATTTGATGTGG+TGG | - | chr1.4:73419226-73419245 | MS.gene60868:intron | 25.0% |
| ! | TTTGTATCGTTCAATTTCTT+GGG | - | chr1.4:73417717-73417736 | MS.gene60868:intron | 25.0% |
| !! | AAAATATGTGGTCAAGATTT+TGG | - | chr1.4:73418493-73418512 | MS.gene60868:intron | 25.0% |
| !! | AACTAGAAAAAGTGTAGATT+AGG | - | chr1.4:73416433-73416452 | MS.gene60868:CDS | 25.0% |
| !! | AATCTCTTTTATCCAACATT+TGG | + | chr1.4:73417225-73417244 | None:intergenic | 25.0% |
| !! | AGTGTTGGAAAAAAAAGAAA+CGG | - | chr1.4:73417631-73417650 | MS.gene60868:intron | 25.0% |
| !! | ATTTCGTCTAAAATCACATT+AGG | - | chr1.4:73417691-73417710 | MS.gene60868:intron | 25.0% |
| !! | CTTTATTTAATGTCCAACAA+TGG | - | chr1.4:73415297-73415316 | MS.gene60868:CDS | 25.0% |
| !! | TGTTGATCAAGGTTTTTATA+TGG | - | chr1.4:73415401-73415420 | MS.gene60868:CDS | 25.0% |
| !! | TTATTTAATTTCTGGAAGGA+AGG | - | chr1.4:73417782-73417801 | MS.gene60868:intron | 25.0% |
| !!! | AACACTTTTTTCCTTCTAAA+TGG | - | chr1.4:73417291-73417310 | MS.gene60868:intron | 25.0% |
| !!! | AACGTTTTAAGCATTTAATG+TGG | - | chr1.4:73419033-73419052 | MS.gene60868:intron | 25.0% |
| !!! | AAGCTTTATTCAAATTTGGA+TGG | - | chr1.4:73418340-73418359 | MS.gene60868:intron | 25.0% |
| !!! | ACACTTTTTTCCTTCTAAAT+GGG | - | chr1.4:73417292-73417311 | MS.gene60868:intron | 25.0% |
| !!! | ATAATTGTTTTAGAACCATG+GGG | + | chr1.4:73417088-73417107 | None:intergenic | 25.0% |
| !!! | ATTATGCTGATTTGATTAGA+AGG | - | chr1.4:73419176-73419195 | MS.gene60868:CDS | 25.0% |
| !!! | GATAATTGTTTTAGAACCAT+GGG | + | chr1.4:73417089-73417108 | None:intergenic | 25.0% |
| !!! | GTCTAAGCTTTATTCAAATT+TGG | - | chr1.4:73418336-73418355 | MS.gene60868:intron | 25.0% |
| !!! | GTGTTTAAATTTGGTAGTTT+TGG | - | chr1.4:73419420-73419439 | MS.gene60868:intron | 25.0% |
| !!! | TAGATTTTAATGTAGCATCA+TGG | + | chr1.4:73415516-73415535 | None:intergenic | 25.0% |
| !!! | TGTATGTTTTCCTTTGTTTT+TGG | - | chr1.4:73418928-73418947 | MS.gene60868:intron | 25.0% |
| !!! | TTGATTAGTTTTACCAATTG+TGG | - | chr1.4:73415872-73415891 | MS.gene60868:intron | 25.0% |
| !!! | TTTTAATACCAGCTTTGAAT+GGG | - | chr1.4:73419378-73419397 | MS.gene60868:intron | 25.0% |
| !!! | TTTTTAATACCAGCTTTGAA+TGG | - | chr1.4:73419377-73419396 | MS.gene60868:intron | 25.0% |
| AAAAGCTGAGAAAACTAACT+GGG | - | chr1.4:73418624-73418643 | MS.gene60868:intron | 30.0% | |
| AAATTCATCGATGAATGGAT+GGG | + | chr1.4:73418251-73418270 | None:intergenic | 30.0% | |
| AAGAGATTGCACAAACAATT+AGG | - | chr1.4:73417237-73417256 | MS.gene60868:intron | 30.0% | |
| AAGCAACCGAAAAAGTTATA+TGG | - | chr1.4:73416075-73416094 | MS.gene60868:intron | 30.0% | |
| AATTCAATAAATTCTGCGAC+AGG | + | chr1.4:73419645-73419664 | None:intergenic | 30.0% | |
| ACTACTCTTAAAATGGATGA+TGG | - | chr1.4:73418274-73418293 | MS.gene60868:intron | 30.0% | |
| ACTGTTGATACTAAAGTAAG+AGG | + | chr1.4:73415097-73415116 | None:intergenic | 30.0% | |
| AGAAACTCAAACTAATGAAG+GGG | - | chr1.4:73419606-73419625 | MS.gene60868:intron | 30.0% | |
| AGATCAATAGTTAGAGATAG+AGG | - | chr1.4:73417423-73417442 | MS.gene60868:intron | 30.0% | |
| AGATGTTAAACTCATAATGC+TGG | - | chr1.4:73419083-73419102 | MS.gene60868:CDS | 30.0% | |
| AGCAACCGAAAAAGTTATAT+GGG | - | chr1.4:73416076-73416095 | MS.gene60868:intron | 30.0% | |
| AGTTACAATAAGAAACTGCA+TGG | + | chr1.4:73417832-73417851 | None:intergenic | 30.0% | |
| ATAAGAAACTGCATGGAAAT+AGG | + | chr1.4:73417825-73417844 | None:intergenic | 30.0% | |
| ATAAGAGTTCCACTATTACA+AGG | + | chr1.4:73415925-73415944 | None:intergenic | 30.0% | |
| ATACAACACGAAAATGTTAG+TGG | + | chr1.4:73418913-73418932 | None:intergenic | 30.0% | |
| ATTTATTTCAATGAAGGCAG+CGG | + | chr1.4:73419277-73419296 | None:intergenic | 30.0% | |
| CACTTAATCCTCTTTAAGTA+GGG | - | chr1.4:73416623-73416642 | MS.gene60868:CDS | 30.0% | |
| CATATTATCTCTTGATCAGA+TGG | + | chr1.4:73418190-73418209 | None:intergenic | 30.0% | |
| CATCTGATCAAGAGATAATA+TGG | - | chr1.4:73418188-73418207 | MS.gene60868:intron | 30.0% | |
| CGATAACATGTTGACAATTT+GGG | + | chr1.4:73416124-73416143 | None:intergenic | 30.0% | |
| CTATCGTGTATTACATCAAA+TGG | + | chr1.4:73417334-73417353 | None:intergenic | 30.0% | |
| CTCAAATAAAAAGCCACAAT+TGG | + | chr1.4:73415888-73415907 | None:intergenic | 30.0% | |
| CTTTCTGTATATGCTCATTT+AGG | - | chr1.4:73419766-73419785 | MS.gene60868:intron | 30.0% | |
| GAAAGGCTGTAAAAAGATTA+TGG | - | chr1.4:73418573-73418592 | MS.gene60868:intron | 30.0% | |
| GATCAATAGTTAGAGATAGA+GGG | - | chr1.4:73417424-73417443 | MS.gene60868:intron | 30.0% | |
| GATTGATGTCTTGTATATAG+TGG | + | chr1.4:73417867-73417886 | None:intergenic | 30.0% | |
| GGGATAATAGTTATGCATTT+GGG | + | chr1.4:73416557-73416576 | None:intergenic | 30.0% | |
| GTGATAAATTCATCGATGAA+TGG | + | chr1.4:73418256-73418275 | None:intergenic | 30.0% | |
| GTTTGAGAAAATTGGAAACA+AGG | + | chr1.4:73416699-73416718 | None:intergenic | 30.0% | |
| TAAATTCATCGATGAATGGA+TGG | + | chr1.4:73418252-73418271 | None:intergenic | 30.0% | |
| TACCTGTCCTAAAAGTTTAT+TGG | - | chr1.4:73418007-73418026 | MS.gene60868:intron | 30.0% | |
| TATCTGTGACTTCAGATATA+AGG | + | chr1.4:73417989-73418008 | None:intergenic | 30.0% | |
| TATGATGAGATTCTTGTTCT+TGG | + | chr1.4:73418870-73418889 | None:intergenic | 30.0% | |
| TCAGCATAATTCATTAAACC+GGG | + | chr1.4:73419166-73419185 | None:intergenic | 30.0% | |
| TCGATAACATGTTGACAATT+TGG | + | chr1.4:73416125-73416144 | None:intergenic | 30.0% | |
| TCTGACACAATATTCATTTG+TGG | - | chr1.4:73419116-73419135 | MS.gene60868:CDS | 30.0% | |
| TGCTTTCAATTGTATTTCAG+TGG | - | chr1.4:73416183-73416202 | MS.gene60868:intron | 30.0% | |
| TGGGATAATAGTTATGCATT+TGG | + | chr1.4:73416558-73416577 | None:intergenic | 30.0% | |
| TTGGTAAAACTAATCAAAGG+GGG | + | chr1.4:73415869-73415888 | None:intergenic | 30.0% | |
| TTGGTTGACATATTACACAA+TGG | - | chr1.4:73417588-73417607 | MS.gene60868:intron | 30.0% | |
| TTGTATCGTTCAATTTCTTG+GGG | - | chr1.4:73417718-73417737 | MS.gene60868:intron | 30.0% | |
| ! | AATAGATTCAGGAATTTTCC+TGG | + | chr1.4:73416944-73416963 | None:intergenic | 30.0% |
| ! | GCTTTCCCATATAACTTTTT+CGG | + | chr1.4:73416084-73416103 | None:intergenic | 30.0% |
| ! | TGATCAAGGTTTTTATATGG+CGG | - | chr1.4:73415404-73415423 | MS.gene60868:CDS | 30.0% |
| ! | TGTACTGTATAGTTTAGCTT+AGG | - | chr1.4:73419326-73419345 | MS.gene60868:intron | 30.0% |
| !! | GAATAAACTTTGAGATGAAG+TGG | + | chr1.4:73417050-73417069 | None:intergenic | 30.0% |
| !! | TAGAAGGAAAAAAGTGTTTC+TGG | + | chr1.4:73417289-73417308 | None:intergenic | 30.0% |
| !!! | GGATAATTGTTTTAGAACCA+TGG | + | chr1.4:73417090-73417109 | None:intergenic | 30.0% |
| !!! | TTTCCTTTGTTTTTGGAAGA+GGG | - | chr1.4:73418935-73418954 | MS.gene60868:intron | 30.0% |
| !!! | TTTTCCTTTGTTTTTGGAAG+AGG | - | chr1.4:73418934-73418953 | MS.gene60868:intron | 30.0% |
| AAAACCTTGATCAACATCAG+CGG | + | chr1.4:73415397-73415416 | None:intergenic | 35.0% | |
| AAAAGAAACGGAAATGCAGT+AGG | - | chr1.4:73417643-73417662 | MS.gene60868:intron | 35.0% | |
| AAAGAAAAAGTGAGGTCTCT+TGG | - | chr1.4:73416479-73416498 | MS.gene60868:CDS | 35.0% | |
| AAATCTAGATGTCTTGACCT+AGG | - | chr1.4:73415529-73415548 | MS.gene60868:CDS | 35.0% | |
| AAATGGATGATCACCATTGT+TGG | + | chr1.4:73415313-73415332 | None:intergenic | 35.0% | |
| AAGTAGGAAACTAGACATGA+AGG | + | chr1.4:73416283-73416302 | None:intergenic | 35.0% | |
| AATTCATCGATGAATGGATG+GGG | + | chr1.4:73418250-73418269 | None:intergenic | 35.0% | |
| ACTAAACCTATCCTCTTGAA+CGG | - | chr1.4:73418544-73418563 | MS.gene60868:intron | 35.0% | |
| AGAATTTCGTCCTATGTGAT+GGG | - | chr1.4:73417354-73417373 | MS.gene60868:intron | 35.0% | |
| AGATTCTACCAGATCTTTCT+CGG | - | chr1.4:73419518-73419537 | MS.gene60868:intron | 35.0% | |
| AGTGTCTACAATTGGAACAA+AGG | + | chr1.4:73415830-73415849 | None:intergenic | 35.0% | |
| ATAAACTGGAGCACGAAAAA+AGG | + | chr1.4:73416877-73416896 | None:intergenic | 35.0% | |
| ATATACAAGACATCAATCGG+TGG | - | chr1.4:73417869-73417888 | MS.gene60868:intron | 35.0% | |
| ATTATATGTGTGCCGTGTTA+TGG | + | chr1.4:73417011-73417030 | None:intergenic | 35.0% | |
| ATTGAATTCACAGCAACTTG+CGG | - | chr1.4:73419657-73419676 | MS.gene60868:intron | 35.0% | |
| CCAATATCCATGTACATGTA+AGG | + | chr1.4:73417905-73417924 | None:intergenic | 35.0% | |
| CCACTTAATCCTCTTTAAGT+AGG | - | chr1.4:73416622-73416641 | MS.gene60868:CDS | 35.0% | |
| CCTACTTAAAGAGGATTAAG+TGG | + | chr1.4:73416625-73416644 | None:intergenic | 35.0% | |
| CCTCTTTAAGTAGGGATTTA+AGG | - | chr1.4:73416631-73416650 | MS.gene60868:CDS | 35.0% | |
| CCTTAAATCCCTACTTAAAG+AGG | + | chr1.4:73416634-73416653 | None:intergenic | 35.0% | |
| CCTTACATGTACATGGATAT+TGG | - | chr1.4:73417902-73417921 | MS.gene60868:intron | 35.0% | |
| CGATATAGTTATCTAGATCG+CGG | - | chr1.4:73415561-73415580 | MS.gene60868:CDS | 35.0% | |
| CGCAAAATCGCATATAATCA+AGG | + | chr1.4:73418984-73419003 | None:intergenic | 35.0% | |
| CTTATCTCAGTGTCTACAAT+TGG | + | chr1.4:73415838-73415857 | None:intergenic | 35.0% | |
| GAAAAGCTGAGAAAACTAAC+TGG | - | chr1.4:73418623-73418642 | MS.gene60868:intron | 35.0% | |
| GAAACAAGGTAGATTACAAG+GGG | + | chr1.4:73416685-73416704 | None:intergenic | 35.0% | |
| GCAATCAAAGCCTATAATAC+TGG | - | chr1.4:73418454-73418473 | MS.gene60868:intron | 35.0% | |
| GCAGAAATCTCAATAGATTC+AGG | + | chr1.4:73416955-73416974 | None:intergenic | 35.0% | |
| GGAAACAAGGTAGATTACAA+GGG | + | chr1.4:73416686-73416705 | None:intergenic | 35.0% | |
| GGAACTGATGTGTAAGTTTA+TGG | + | chr1.4:73417141-73417160 | None:intergenic | 35.0% | |
| GGAAGCAACTGTTATAAAAG+TGG | - | chr1.4:73418777-73418796 | MS.gene60868:intron | 35.0% | |
| GGATCAAATTTAACACCTCT+AGG | + | chr1.4:73418169-73418188 | None:intergenic | 35.0% | |
| GTTAAACTCATAATGCTGGT+TGG | - | chr1.4:73419087-73419106 | MS.gene60868:CDS | 35.0% | |
| GTTAGAGGAACTTTCATCTT+CGG | - | chr1.4:73416799-73416818 | MS.gene60868:intron | 35.0% | |
| GTTATGCATCAATACCATCT+TGG | - | chr1.4:73418646-73418665 | MS.gene60868:intron | 35.0% | |
| TACAGATAACCAAGAGTGAT+TGG | + | chr1.4:73419310-73419329 | None:intergenic | 35.0% | |
| TACTTTCTCATTCATAGGGT+TGG | + | chr1.4:73417560-73417579 | None:intergenic | 35.0% | |
| TATACAAGACATCAATCGGT+GGG | - | chr1.4:73417870-73417889 | MS.gene60868:intron | 35.0% | |
| TCTTCGATTCAGTTATGACT+GGG | + | chr1.4:73417111-73417130 | None:intergenic | 35.0% | |
| TGAGCATATACAGAAAGACT+AGG | + | chr1.4:73419763-73419782 | None:intergenic | 35.0% | |
| TGGAAACAAGGTAGATTACA+AGG | + | chr1.4:73416687-73416706 | None:intergenic | 35.0% | |
| TGGAAGGTCATTGAAAAAGT+AGG | + | chr1.4:73419999-73420018 | None:intergenic | 35.0% | |
| TGTATCGTTCAATTTCTTGG+GGG | - | chr1.4:73417719-73417738 | MS.gene60868:intron | 35.0% | |
| TTAATAGGAATTCAGCTCAC+AGG | - | chr1.4:73420091-73420110 | MS.gene60868:intron | 35.0% | |
| TTATATGTGTGCCGTGTTAT+GGG | + | chr1.4:73417010-73417029 | None:intergenic | 35.0% | |
| TTCTTCGATTCAGTTATGAC+TGG | + | chr1.4:73417112-73417131 | None:intergenic | 35.0% | |
| TTGTGCTATCCTTGTAATAG+TGG | - | chr1.4:73415913-73415932 | MS.gene60868:intron | 35.0% | |
| ! | AGTGGAAATGATTTTACCTG+AGG | + | chr1.4:73418895-73418914 | None:intergenic | 35.0% |
| ! | ATAGTCGACGAGTCAATTTT+TGG | + | chr1.4:73419586-73419605 | None:intergenic | 35.0% |
| ! | CAGTTGACTTAATCGAATGT+CGG | + | chr1.4:73419971-73419990 | None:intergenic | 35.0% |
| ! | TATAGGCTTTGATTGCTCTA+TGG | + | chr1.4:73418450-73418469 | None:intergenic | 35.0% |
| ! | TATGATGGGGATGAATAAAC+TGG | + | chr1.4:73416891-73416910 | None:intergenic | 35.0% |
| ! | TGATTATATGCGATTTTGCG+CGG | - | chr1.4:73418984-73419003 | MS.gene60868:intron | 35.0% |
| ! | TGCATGCTGTTTGAGAAAAT+TGG | + | chr1.4:73416707-73416726 | None:intergenic | 35.0% |
| ! | TGTTGATAAGCCCATTTAGA+AGG | + | chr1.4:73417305-73417324 | None:intergenic | 35.0% |
| ! | TTTTATAACAGTTGCTTCCG+AGG | + | chr1.4:73418776-73418795 | None:intergenic | 35.0% |
| !! | AAGGAAAAAAGTGTTTCTGG+AGG | + | chr1.4:73417286-73417305 | None:intergenic | 35.0% |
| !! | AATGGGTTTTGCTTCTTTCA+TGG | - | chr1.4:73415144-73415163 | MS.gene60868:intron | 35.0% |
| !! | CACATATTTTTCGACGCTTT+CGG | + | chr1.4:73418483-73418502 | None:intergenic | 35.0% |
| !! | GTCATCTTTTTCACCCAATT+TGG | + | chr1.4:73418737-73418756 | None:intergenic | 35.0% |
| !!! | TGCCAATAAACTTTTAGGAC+AGG | + | chr1.4:73418012-73418031 | None:intergenic | 35.0% |
| AACATGTGTAGATGTGGTTG+TGG | + | chr1.4:73416782-73416801 | None:intergenic | 40.0% | |
| ACACCCTCTTCCAAAAACAA+AGG | + | chr1.4:73418941-73418960 | None:intergenic | 40.0% | |
| ACAGAAGAGGATGAAAAGGA+TGG | - | chr1.4:73418670-73418689 | MS.gene60868:intron | 40.0% | |
| ACATGTGTAGATGTGGTTGT+GGG | + | chr1.4:73416781-73416800 | None:intergenic | 40.0% | |
| ACCACATCTACACATGTTAG+AGG | - | chr1.4:73416784-73416803 | MS.gene60868:intron | 40.0% | |
| ACGAAAAAAGGCAGTACAGA+GGG | + | chr1.4:73416865-73416884 | None:intergenic | 40.0% | |
| AGAATCTCATCATAGTCCTC+AGG | - | chr1.4:73418876-73418895 | MS.gene60868:intron | 40.0% | |
| AGAATGGCTACTTGAAAGTC+AGG | - | chr1.4:73419543-73419562 | MS.gene60868:intron | 40.0% | |
| AGACTAGAGAGTAGTATGAC+TGG | + | chr1.4:73416578-73416597 | None:intergenic | 40.0% | |
| AGAGGATTAAGTGGAGTACA+TGG | + | chr1.4:73416616-73416635 | None:intergenic | 40.0% | |
| ATACCATCTTGGAACAGAAG+AGG | - | chr1.4:73418657-73418676 | MS.gene60868:intron | 40.0% | |
| ATATTGCATTTGTGCGTGTC+AGG | - | chr1.4:73416225-73416244 | MS.gene60868:intron | 40.0% | |
| CAACAGTTTGGACCAAATGT+TGG | - | chr1.4:73417210-73417229 | MS.gene60868:intron | 40.0% | |
| CAAGAAGGGACTCAATTAGA+TGG | + | chr1.4:73417179-73417198 | None:intergenic | 40.0% | |
| CAATTGGAACAAAGGAACCA+AGG | + | chr1.4:73415822-73415841 | None:intergenic | 40.0% | |
| CAGATCTTTCTCGGTTAGAA+TGG | - | chr1.4:73419527-73419546 | MS.gene60868:intron | 40.0% | |
| CATTCTAACCGAGAAAGATC+TGG | + | chr1.4:73419529-73419548 | None:intergenic | 40.0% | |
| CCAAAATGTTCCTGAAACCT+CGG | - | chr1.4:73418756-73418775 | MS.gene60868:intron | 40.0% | |
| CGACATTCGATTAAGTCAAC+TGG | - | chr1.4:73419969-73419988 | MS.gene60868:intron | 40.0% | |
| CTAAACCTATCCTCTTGAAC+GGG | - | chr1.4:73418545-73418564 | MS.gene60868:intron | 40.0% | |
| CTGAAAGAAATCTGCGAACA+AGG | + | chr1.4:73419692-73419711 | None:intergenic | 40.0% | |
| CTTAACCTTCCAATCACTCT+TGG | - | chr1.4:73419298-73419317 | MS.gene60868:intron | 40.0% | |
| CTTCATCCATTCCCATAACA+CGG | - | chr1.4:73416996-73417015 | MS.gene60868:CDS | 40.0% | |
| CTTTATATGACTCCAGAGAG+TGG | - | chr1.4:73418598-73418617 | MS.gene60868:intron | 40.0% | |
| CTTTCGGCTTCCAGTATTAT+AGG | + | chr1.4:73418467-73418486 | None:intergenic | 40.0% | |
| GAAATATCGGTAAGGAGAGT+AGG | - | chr1.4:73417387-73417406 | MS.gene60868:intron | 40.0% | |
| GAAGTGGACGATTTATAGCT+TGG | + | chr1.4:73417034-73417053 | None:intergenic | 40.0% | |
| GACCTGTAGAAATATCGGTA+AGG | - | chr1.4:73417379-73417398 | MS.gene60868:intron | 40.0% | |
| GACTAGAGAGTAGTATGACT+GGG | + | chr1.4:73416577-73416596 | None:intergenic | 40.0% | |
| GAGAATTTCGTCCTATGTGA+TGG | - | chr1.4:73417353-73417372 | MS.gene60868:intron | 40.0% | |
| GAGGATTAAGTGGAGTACAT+GGG | + | chr1.4:73416615-73416634 | None:intergenic | 40.0% | |
| GATAACCAAGAGTGATTGGA+AGG | + | chr1.4:73419306-73419325 | None:intergenic | 40.0% | |
| GCATTCACCTTACATGTACA+TGG | - | chr1.4:73417895-73417914 | MS.gene60868:intron | 40.0% | |
| GGGAAGACCTGTAGAAATAT+CGG | - | chr1.4:73417374-73417393 | MS.gene60868:intron | 40.0% | |
| GTTGTTAGGTAACACAAGAG+TGG | - | chr1.4:73418134-73418153 | MS.gene60868:intron | 40.0% | |
| TAATCACTCCCATTCAAAGC+TGG | + | chr1.4:73419389-73419408 | None:intergenic | 40.0% | |
| TAGGAAACTAGACATGAAGG+AGG | + | chr1.4:73416280-73416299 | None:intergenic | 40.0% | |
| TATCTTATTCGTGTCGTCCT+TGG | - | chr1.4:73415802-73415821 | MS.gene60868:intron | 40.0% | |
| TATTGGCGATCTCAAATGCT+TGG | - | chr1.4:73417919-73417938 | MS.gene60868:intron | 40.0% | |
| TCCTCTAACATGTGTAGATG+TGG | + | chr1.4:73416788-73416807 | None:intergenic | 40.0% | |
| TCTCATCTGTGATTCTGATC+AGG | - | chr1.4:73416515-73416534 | MS.gene60868:CDS | 40.0% | |
| TGACTTAATCGAATGTCGGA+AGG | + | chr1.4:73419967-73419986 | None:intergenic | 40.0% | |
| TGCGTGTCAGGTTTATTTCA+TGG | - | chr1.4:73416237-73416256 | MS.gene60868:intron | 40.0% | |
| TGGAACAGAAGAGGATGAAA+AGG | - | chr1.4:73418666-73418685 | MS.gene60868:intron | 40.0% | |
| TTAACACCTCTAGGTAATCC+AGG | + | chr1.4:73418160-73418179 | None:intergenic | 40.0% | |
| TTAAGTGGAGTACATGGGAA+TGG | + | chr1.4:73416610-73416629 | None:intergenic | 40.0% | |
| ! | CAGTGTCAAGGTTGAGATTT+TGG | + | chr1.4:73419921-73419940 | None:intergenic | 40.0% |
| ! | CTAATCGACTGCAATTTGCT+CGG | + | chr1.4:73415469-73415488 | None:intergenic | 40.0% |
| ! | CTCCTTACCGATATTTCTAC+AGG | + | chr1.4:73417384-73417403 | None:intergenic | 40.0% |
| ! | CTGCAATTTGCTCGGTATTA+AGG | + | chr1.4:73415461-73415480 | None:intergenic | 40.0% |
| !! | CGAAAGCGTCGAAAAATATG+TGG | - | chr1.4:73418481-73418500 | MS.gene60868:intron | 40.0% |
| !! | TTGCTTGCAAAAGTTGGTGA+AGG | - | chr1.4:73418214-73418233 | MS.gene60868:intron | 40.0% |
| !!! | TTGGTAGTTTTGGTTCGTGA+TGG | - | chr1.4:73419430-73419449 | MS.gene60868:intron | 40.0% |
| AATGTAGGTGTTTCGCGAGA+TGG | - | chr1.4:73418406-73418425 | MS.gene60868:intron | 45.0% | |
| AATTCACAGCAACTTGCGGA+AGG | - | chr1.4:73419661-73419680 | MS.gene60868:intron | 45.0% | |
| ACAGGATAGCTACATTGCGT+GGG | - | chr1.4:73420109-73420128 | MS.gene60868:intron | 45.0% | |
| ACCAAGTTGTGAAGCGATTG+TGG | + | chr1.4:73415645-73415664 | None:intergenic | 45.0% | |
| ACTAGACATGAAGGAGGTTG+AGG | + | chr1.4:73416274-73416293 | None:intergenic | 45.0% | |
| AGATTTCTTAGTCTGCCCCA+TGG | - | chr1.4:73417070-73417089 | MS.gene60868:intron | 45.0% | |
| ATATGGCGGCGATCACATTA+GGG | - | chr1.4:73415418-73415437 | MS.gene60868:CDS | 45.0% | |
| ATGGGAATGGATGAAGCAGA+AGG | + | chr1.4:73416992-73417011 | None:intergenic | 45.0% | |
| ATTGAGTCCCTTCTTGTCGA+CGG | - | chr1.4:73417183-73417202 | MS.gene60868:intron | 45.0% | |
| CACGAAAAAAGGCAGTACAG+AGG | + | chr1.4:73416866-73416885 | None:intergenic | 45.0% | |
| CAGTGTCAGCGTCAAGATTA+AGG | + | chr1.4:73419873-73419892 | None:intergenic | 45.0% | |
| CATCCTCTTCTGTTCCAAGA+TGG | + | chr1.4:73418663-73418682 | None:intergenic | 45.0% | |
| CGAGCAAATTGCAGTCGATT+AGG | - | chr1.4:73415467-73415486 | MS.gene60868:CDS | 45.0% | |
| CTATATCGCAATCACGACCT+AGG | + | chr1.4:73415549-73415568 | None:intergenic | 45.0% | |
| CTTGTATATGTAGACCGTCG+TGG | - | chr1.4:73416006-73416025 | MS.gene60868:intron | 45.0% | |
| CTTTCCGCTGATGTTGATCA+AGG | - | chr1.4:73415390-73415409 | MS.gene60868:CDS | 45.0% | |
| GAACATTGCTTCTCATTGCG+AGG | + | chr1.4:73418838-73418857 | None:intergenic | 45.0% | |
| GAGGATAGGTTTAGTCCTTC+CGG | + | chr1.4:73418539-73418558 | None:intergenic | 45.0% | |
| GCAGTCGATTAGGTATGATG+TGG | - | chr1.4:73415477-73415496 | MS.gene60868:CDS | 45.0% | |
| GCTCTACATTTGCAGTGTCA+AGG | + | chr1.4:73419933-73419952 | None:intergenic | 45.0% | |
| TAAAGCTTAGACAGTCCACC+TGG | + | chr1.4:73418328-73418347 | None:intergenic | 45.0% | |
| TACAGGTCTTCCCATCACAT+AGG | + | chr1.4:73417367-73417386 | None:intergenic | 45.0% | |
| TATATGACTCCAGAGAGTGG+AGG | - | chr1.4:73418601-73418620 | MS.gene60868:intron | 45.0% | |
| TATATGGCGGCGATCACATT+AGG | - | chr1.4:73415417-73415436 | MS.gene60868:CDS | 45.0% | |
| TATATGTAGACCGTCGTGGT+TGG | - | chr1.4:73416010-73416029 | MS.gene60868:intron | 45.0% | |
| TGGCACTTGCTTGCAAAAGT+TGG | - | chr1.4:73418208-73418227 | MS.gene60868:intron | 45.0% | |
| TGGTTCGTGATGGTAGTTTG+TGG | - | chr1.4:73419440-73419459 | MS.gene60868:intron | 45.0% | |
| TTGAATGCCGTCGACAAGAA+GGG | + | chr1.4:73417193-73417212 | None:intergenic | 45.0% | |
| TTGACAATTTGGGCAAGCTC+TGG | + | chr1.4:73416114-73416133 | None:intergenic | 45.0% | |
| ! | CCGAGGTTTCAGGAACATTT+TGG | + | chr1.4:73418759-73418778 | None:intergenic | 45.0% |
| ! | TGAGATTTTCACAACGTGCC+AGG | - | chr1.4:73416923-73416942 | MS.gene60868:CDS | 45.0% |
| !! | CATTCATAGGGTTGGCTACA+TGG | + | chr1.4:73417552-73417571 | None:intergenic | 45.0% |
| ACAGTTGCTTCCGAGGTTTC+AGG | + | chr1.4:73418769-73418788 | None:intergenic | 50.0% | |
| ACTCATCCTCAGCGTTTACC+AGG | - | chr1.4:73418307-73418326 | MS.gene60868:intron | 50.0% | |
| AGCGGCAAACATGCATCTGT+TGG | + | chr1.4:73419259-73419278 | None:intergenic | 50.0% | |
| ATGTGGTTGTGGGTCTGTCT+TGG | + | chr1.4:73416771-73416790 | None:intergenic | 50.0% | |
| CACAGGATAGCTACATTGCG+TGG | - | chr1.4:73420108-73420127 | MS.gene60868:intron | 50.0% | |
| CAGCAGCAGCAAGCCAAATT+GGG | - | chr1.4:73418721-73418740 | MS.gene60868:intron | 50.0% | |
| CAGGATAGCTACATTGCGTG+GGG | - | chr1.4:73420110-73420129 | MS.gene60868:intron | 50.0% | |
| CATTGCTTCTCATTGCGAGG+AGG | + | chr1.4:73418835-73418854 | None:intergenic | 50.0% | |
| CCGAAAAGGGATGGGGAAAA+CGG | - | chr1.4:73419721-73419740 | MS.gene60868:intron | 50.0% | |
| GCCACAATCGCTTCACAACT+TGG | - | chr1.4:73415641-73415660 | MS.gene60868:CDS | 50.0% | |
| GCGGCAAACATGCATCTGTT+GGG | + | chr1.4:73419258-73419277 | None:intergenic | 50.0% | |
| GTCGACGGCATTCAACAGTT+TGG | - | chr1.4:73417198-73417217 | MS.gene60868:intron | 50.0% | |
| GTTGAATGCCGTCGACAAGA+AGG | + | chr1.4:73417194-73417213 | None:intergenic | 50.0% | |
| TAGGTAACACAAGAGTGGCC+TGG | - | chr1.4:73418139-73418158 | MS.gene60868:intron | 50.0% | |
| TCAGAGCCAGTCTCCGAAAA+GGG | - | chr1.4:73419708-73419727 | MS.gene60868:intron | 50.0% | |
| TGAAGCCCGTTCAAGAGGAT+AGG | + | chr1.4:73418553-73418572 | None:intergenic | 50.0% | |
| TGGGGAAAACGGAGAGCAAA+TGG | - | chr1.4:73419732-73419751 | MS.gene60868:intron | 50.0% | |
| TGTGTGCCGTGTTATGGGAA+TGG | + | chr1.4:73417005-73417024 | None:intergenic | 50.0% | |
| TTCAGAGCCAGTCTCCGAAA+AGG | - | chr1.4:73419707-73419726 | MS.gene60868:intron | 50.0% | |
| TTCTCATTGCGAGGAGGTTC+AGG | + | chr1.4:73418829-73418848 | None:intergenic | 50.0% | |
| TTGGTTGGAGACGTTGTGAG+AGG | + | chr1.4:73416752-73416771 | None:intergenic | 50.0% | |
| ! | CAATTTGGGCAAGCTCTGGT+AGG | + | chr1.4:73416110-73416129 | None:intergenic | 50.0% |
| ! | CCGTTTTCCCCATCCCTTTT+CGG | + | chr1.4:73419724-73419743 | None:intergenic | 50.0% |
| ! | CTCTTGAACGGGCTTCAGAA+AGG | - | chr1.4:73418556-73418575 | MS.gene60868:intron | 50.0% |
| ! | CTTTTGTCCACCAACCACGA+CGG | + | chr1.4:73416023-73416042 | None:intergenic | 50.0% |
| ! | TCAGCTTTTCCTCCACTCTC+TGG | + | chr1.4:73418613-73418632 | None:intergenic | 50.0% |
| !! | AAGGAAGGCATCAGTCACAC+AGG | - | chr1.4:73417797-73417816 | MS.gene60868:intron | 50.0% |
| !! | CTTTCTGAAGCCCGTTCAAG+AGG | + | chr1.4:73418558-73418577 | None:intergenic | 50.0% |
| AAGCAGAAGGCTGCAGAGAC+AGG | + | chr1.4:73416979-73416998 | None:intergenic | 55.0% | |
| AGATGGCTTCGAGAAGCGAG+TGG | + | chr1.4:73417162-73417181 | None:intergenic | 55.0% | |
| AGCCAGTCTCCGAAAAGGGA+TGG | - | chr1.4:73419712-73419731 | MS.gene60868:intron | 55.0% | |
| AGGTTCAGGCGTCACGGAAT+TGG | + | chr1.4:73418815-73418834 | None:intergenic | 55.0% | |
| AGTCCACCTGGTAAACGCTG+AGG | + | chr1.4:73418316-73418335 | None:intergenic | 55.0% | |
| ATGTAGACCGTCGTGGTTGG+TGG | - | chr1.4:73416013-73416032 | MS.gene60868:intron | 55.0% | |
| CATCCTCAGCGTTTACCAGG+TGG | - | chr1.4:73418310-73418329 | MS.gene60868:intron | 55.0% | |
| CCAGCAGCAGCAAGCCAAAT+TGG | - | chr1.4:73418720-73418739 | MS.gene60868:intron | 55.0% | |
| CCAGTCTCCGAAAAGGGATG+GGG | - | chr1.4:73419714-73419733 | MS.gene60868:intron | 55.0% | |
| CGATTGTGGCAGCGACATTC+AGG | + | chr1.4:73415631-73415650 | None:intergenic | 55.0% | |
| GAGTGGCCTGGATTACCTAG+AGG | - | chr1.4:73418151-73418170 | MS.gene60868:intron | 55.0% | |
| GATAGCTACATTGCGTGGGG+TGG | - | chr1.4:73420113-73420132 | MS.gene60868:intron | 55.0% | |
| GCCAGTCTCCGAAAAGGGAT+GGG | - | chr1.4:73419713-73419732 | MS.gene60868:intron | 55.0% | |
| GGTTCAGGCGTCACGGAATT+GGG | + | chr1.4:73418814-73418833 | None:intergenic | 55.0% | |
| GGTTGTGGGTCTGTCTTGGT+TGG | + | chr1.4:73416767-73416786 | None:intergenic | 55.0% | |
| GTCACGGAATTGGGAGTGAC+TGG | + | chr1.4:73418805-73418824 | None:intergenic | 55.0% | |
| !! | AAGATTTTGGCGACGTCCGC+TGG | - | chr1.4:73418506-73418525 | MS.gene60868:intron | 55.0% |
| !! | CCAATTTGGCTTGCTGCTGC+TGG | + | chr1.4:73418723-73418742 | None:intergenic | 55.0% |
| !! | CGTCGTGGTTGGTGGACAAA+AGG | - | chr1.4:73416021-73416040 | MS.gene60868:intron | 55.0% |
| ! | CCCCATCCCTTTTCGGAGAC+TGG | + | chr1.4:73419717-73419736 | None:intergenic | 60.0% |
| ! | TCCTTCCGGTCTTGTGCCAG+CGG | + | chr1.4:73418525-73418544 | None:intergenic | 60.0% |
| GACGTCCGCTGGCACAAGAC+CGG | - | chr1.4:73418517-73418536 | MS.gene60868:intron | 65.0% | |
| GCGAGGAGGTTCAGGCGTCA+CGG | + | chr1.4:73418821-73418840 | None:intergenic | 65.0% | |
| TCCGCTGGCACAAGACCGGA+AGG | - | chr1.4:73418521-73418540 | MS.gene60868:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 73415060 | 73420154 | 73415060 | ID=MS.gene60868 |
| chr1.4 | mRNA | 73415060 | 73420154 | 73415060 | ID=MS.gene60868.t1;Parent=MS.gene60868 |
| chr1.4 | exon | 73420141 | 73420154 | 73420141 | ID=MS.gene60868.t1.exon1;Parent=MS.gene60868.t1 |
| chr1.4 | CDS | 73420141 | 73420154 | 73420141 | ID=cds.MS.gene60868.t1;Parent=MS.gene60868.t1 |
| chr1.4 | exon | 73419060 | 73419195 | 73419060 | ID=MS.gene60868.t1.exon2;Parent=MS.gene60868.t1 |
| chr1.4 | CDS | 73419060 | 73419195 | 73419060 | ID=cds.MS.gene60868.t1;Parent=MS.gene60868.t1 |
| chr1.4 | exon | 73416886 | 73417072 | 73416886 | ID=MS.gene60868.t1.exon3;Parent=MS.gene60868.t1 |
| chr1.4 | CDS | 73416886 | 73417072 | 73416886 | ID=cds.MS.gene60868.t1;Parent=MS.gene60868.t1 |
| chr1.4 | exon | 73416317 | 73416801 | 73416317 | ID=MS.gene60868.t1.exon4;Parent=MS.gene60868.t1 |
| chr1.4 | CDS | 73416317 | 73416801 | 73416317 | ID=cds.MS.gene60868.t1;Parent=MS.gene60868.t1 |
| chr1.4 | exon | 73415224 | 73415694 | 73415224 | ID=MS.gene60868.t1.exon5;Parent=MS.gene60868.t1 |
| chr1.4 | CDS | 73415224 | 73415694 | 73415224 | ID=cds.MS.gene60868.t1;Parent=MS.gene60868.t1 |
| chr1.4 | exon | 73415060 | 73415116 | 73415060 | ID=MS.gene60868.t1.exon6;Parent=MS.gene60868.t1 |
| chr1.4 | CDS | 73415060 | 73415116 | 73415060 | ID=cds.MS.gene60868.t1;Parent=MS.gene60868.t1 |
| Gene Sequence |
| Protein sequence |
