Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61140.t1 | XP_013457503.1 | 92.9 | 254 | 6 | 2 | 1 | 242 | 1 | 254 | 1.30E-108 | 402.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61140.t1 | C0HIA3 | 42.3 | 253 | 115 | 7 | 1 | 238 | 1 | 237 | 4.4e-41 | 169.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61140.t1 | G7JE28 | 92.9 | 254 | 6 | 2 | 1 | 242 | 1 | 254 | 9.3e-109 | 402.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene61140.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61140.t1 | MTR_4g097130 | 94.822 | 309 | 4 | 2 | 1 | 297 | 1 | 309 | 0.0 | 574 |
| MS.gene61140.t1 | MTR_4g097130 | 94.805 | 308 | 4 | 2 | 1 | 296 | 1 | 308 | 0.0 | 570 |
| MS.gene61140.t1 | MTR_4g097130 | 93.291 | 313 | 4 | 3 | 1 | 296 | 1 | 313 | 0.0 | 565 |
| MS.gene61140.t1 | MTR_5g015340 | 63.754 | 309 | 83 | 7 | 1 | 296 | 1 | 293 | 1.37e-96 | 286 |
| MS.gene61140.t1 | MTR_5g015340 | 63.754 | 309 | 83 | 7 | 1 | 296 | 1 | 293 | 1.37e-96 | 286 |
| MS.gene61140.t1 | MTR_5g015340 | 63.871 | 310 | 83 | 7 | 1 | 297 | 1 | 294 | 1.74e-96 | 290 |
| MS.gene61140.t1 | MTR_2g031870 | 44.094 | 254 | 112 | 7 | 1 | 239 | 1 | 239 | 1.30e-59 | 192 |
| MS.gene61140.t1 | MTR_8g494240 | 43.359 | 256 | 109 | 7 | 1 | 239 | 1 | 237 | 4.15e-57 | 186 |
| MS.gene61140.t1 | MTR_8g494240 | 43.359 | 256 | 109 | 7 | 1 | 239 | 1 | 237 | 4.16e-57 | 186 |
| MS.gene61140.t1 | MTR_8g494240 | 43.359 | 256 | 109 | 7 | 1 | 239 | 1 | 237 | 8.38e-56 | 186 |
| MS.gene61140.t1 | MTR_8g092810 | 39.098 | 266 | 125 | 8 | 1 | 243 | 1 | 252 | 6.74e-49 | 169 |
| MS.gene61140.t1 | MTR_0095s0040 | 49.412 | 170 | 66 | 5 | 1 | 164 | 1 | 156 | 6.76e-42 | 145 |
| MS.gene61140.t1 | MTR_2g031870 | 36.614 | 254 | 105 | 8 | 1 | 239 | 1 | 213 | 2.98e-38 | 136 |
| MS.gene61140.t1 | MTR_1g041765 | 69.048 | 84 | 25 | 1 | 1 | 84 | 1 | 83 | 5.08e-33 | 120 |
| MS.gene61140.t1 | MTR_2g099610 | 35.648 | 216 | 107 | 5 | 1 | 190 | 1 | 210 | 7.23e-27 | 107 |
| MS.gene61140.t1 | MTR_8g018410 | 34.286 | 280 | 147 | 9 | 1 | 269 | 1 | 254 | 3.30e-25 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61140.t1 | AT5G67580 | 48.710 | 310 | 135 | 5 | 1 | 297 | 1 | 299 | 6.82e-63 | 201 |
| MS.gene61140.t1 | AT5G67580 | 48.710 | 310 | 135 | 5 | 1 | 297 | 1 | 299 | 6.82e-63 | 201 |
| MS.gene61140.t1 | AT3G49850 | 46.732 | 306 | 134 | 7 | 1 | 293 | 1 | 290 | 1.04e-58 | 190 |
| MS.gene61140.t1 | AT3G49850 | 46.732 | 306 | 134 | 7 | 1 | 293 | 1 | 290 | 1.04e-58 | 190 |
| MS.gene61140.t1 | AT1G49950 | 42.023 | 257 | 116 | 9 | 1 | 241 | 1 | 240 | 3.93e-53 | 176 |
| MS.gene61140.t1 | AT1G49950 | 42.023 | 257 | 116 | 9 | 1 | 241 | 1 | 240 | 3.93e-53 | 176 |
| MS.gene61140.t1 | AT1G49950 | 42.023 | 257 | 116 | 9 | 1 | 241 | 1 | 240 | 3.93e-53 | 176 |
| MS.gene61140.t1 | AT1G72740 | 30.584 | 291 | 138 | 8 | 1 | 269 | 1 | 249 | 4.19e-22 | 94.0 |
| MS.gene61140.t1 | AT1G17520 | 37.576 | 165 | 92 | 4 | 1 | 162 | 1 | 157 | 1.80e-21 | 92.4 |
| MS.gene61140.t1 | AT1G17520 | 37.576 | 165 | 92 | 4 | 1 | 162 | 1 | 157 | 2.08e-21 | 92.0 |
| MS.gene61140.t1 | AT1G17520 | 37.576 | 165 | 92 | 4 | 1 | 162 | 1 | 157 | 2.24e-21 | 92.0 |
| MS.gene61140.t1 | AT1G17520 | 37.576 | 165 | 92 | 4 | 1 | 162 | 1 | 157 | 2.37e-21 | 92.0 |
| MS.gene61140.t1 | AT1G72740 | 67.241 | 58 | 19 | 0 | 1 | 58 | 1 | 58 | 5.28e-20 | 88.2 |
Find 75 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAAGCCCCTGACAATTTC+TGG | 0.156688 | 8.1:+25497237 | MS.gene61140:CDS |
| AATGCAAAATGCTTCATATT+TGG | 0.195627 | 8.1:+25500416 | MS.gene61140:CDS |
| TTGATAGCTCTGCCTCAATT+TGG | 0.196523 | 8.1:-25500225 | None:intergenic |
| CAATTGGTTATTGTCAGTTT+TGG | 0.201241 | 8.1:-25497175 | None:intergenic |
| ATTCGAACGCGTACGCAAAA+TGG | 0.224697 | 8.1:-25496936 | None:intergenic |
| CTCCACCTCCGGAGAATCTT+TGG | 0.268223 | 8.1:-25500170 | None:intergenic |
| TGTATTGTGAACAGGATAAA+TGG | 0.295045 | 8.1:+25497079 | MS.gene61140:intron |
| TGATAGCTCTGCCTCAATTT+GGG | 0.303115 | 8.1:-25500224 | None:intergenic |
| ATGTTCCACTACAAATAGTT+AGG | 0.338025 | 8.1:-25497284 | None:intergenic |
| TCAAACACGGGGCTGGAAAA+TGG | 0.376865 | 8.1:+25496882 | MS.gene61140:CDS |
| TCTGCAGTCCATTTCTGCTT+AGG | 0.379164 | 8.1:-25496830 | None:intergenic |
| CTACTTTACTCAAGGCCAAT+TGG | 0.386042 | 8.1:-25497191 | None:intergenic |
| ATATAAATGTCACAGCAATA+TGG | 0.388272 | 8.1:+25497106 | MS.gene61140:CDS |
| CGCCTCCCTAGCTGCTGCTT+CGG | 0.390489 | 8.1:-25500329 | None:intergenic |
| CTACAAATAGTTAGGGGCTT+AGG | 0.415247 | 8.1:-25497276 | None:intergenic |
| ATGTTCCACCAGAAATTGTC+AGG | 0.418565 | 8.1:-25497245 | None:intergenic |
| TTCTCAGAGACCGCTGAACT+TGG | 0.424839 | 8.1:-25500109 | None:intergenic |
| GAAGAAGCGGCGTTGAAAGC+TGG | 0.427269 | 8.1:+25496854 | MS.gene61140:CDS |
| TGGGTGCTCCTAAGCAGAAA+TGG | 0.427716 | 8.1:+25496822 | MS.gene61140:CDS |
| TGCTGCTTCGGCCTGTGCAA+TGG | 0.434469 | 8.1:-25500317 | None:intergenic |
| TATAAATGTCACAGCAATAT+GGG | 0.435123 | 8.1:+25497107 | MS.gene61140:CDS |
| GGGAGACAATAATGTATTAG+AGG | 0.441902 | 8.1:+25497986 | MS.gene61140:CDS |
| GCAGCCTTGTCAGAACCCTT+TGG | 0.463786 | 8.1:-25498029 | None:intergenic |
| AGCTGCAAAAGCAGTTGCAG+AGG | 0.469233 | 8.1:+25500285 | MS.gene61140:CDS |
| CGAAGCAGCAGCTAGGGAGG+CGG | 0.477225 | 8.1:+25500330 | MS.gene61140:CDS |
| CAAAACTGACAATAACCAAT+TGG | 0.479938 | 8.1:+25497176 | MS.gene61140:CDS |
| GGAGTAGTCAAACACGGGGC+TGG | 0.481269 | 8.1:+25496875 | MS.gene61140:CDS |
| CTTTGCAAAAGCAGCGATGA+AGG | 0.481859 | 8.1:+25500387 | MS.gene61140:CDS |
| GTCCAAAGATTCTCCGGAGG+TGG | 0.481885 | 8.1:+25500168 | MS.gene61140:CDS |
| ACAGGCCGAAGCAGCAGCTA+GGG | 0.483254 | 8.1:+25500324 | MS.gene61140:CDS |
| GGCCGAAGCAGCAGCTAGGG+AGG | 0.499766 | 8.1:+25500327 | MS.gene61140:CDS |
| TGTTCCACTACAAATAGTTA+GGG | 0.500173 | 8.1:-25497283 | None:intergenic |
| AGCGAGGTCCAAAGATTCTC+CGG | 0.502665 | 8.1:+25500162 | MS.gene61140:CDS |
| TCACACATCTTCTCCACCTC+CGG | 0.506821 | 8.1:-25500181 | None:intergenic |
| CACAGGCCGAAGCAGCAGCT+AGG | 0.511915 | 8.1:+25500323 | MS.gene61140:CDS |
| TGCCATTGCTTCTTACATAG+AGG | 0.516855 | 8.1:+25498049 | MS.gene61140:CDS |
| GTCAATATGAAGGAGCCAAA+GGG | 0.526790 | 8.1:+25498014 | MS.gene61140:CDS |
| GTTCAAAAGAACAAGTATCA+AGG | 0.540828 | 8.1:+25497319 | MS.gene61140:CDS |
| CCTTTCAAAATCCCAAATTG+AGG | 0.542802 | 8.1:+25500213 | MS.gene61140:CDS |
| TACCTCTATGTAAGAAGCAA+TGG | 0.545469 | 8.1:-25498051 | None:intergenic |
| TCACAGCAATATGGGGATCC+CGG | 0.546612 | 8.1:+25497115 | MS.gene61140:CDS |
| GGCAGAAGTTGCCATTGCAC+AGG | 0.551573 | 8.1:+25500306 | MS.gene61140:CDS |
| CGCAAAATGGAACTGAACTC+AGG | 0.555443 | 8.1:-25496923 | None:intergenic |
| AAGCTCTTCTCTGATGCTTG+TGG | 0.556765 | 8.1:+25500138 | MS.gene61140:CDS |
| TTTCTGCTTAGGAGCACCCA+TGG | 0.559262 | 8.1:-25496819 | None:intergenic |
| AGAGGCTATTGTCAATATGA+AGG | 0.562785 | 8.1:+25498004 | MS.gene61140:CDS |
| CTCTGATGCTTGTGGAAGCG+AGG | 0.566860 | 8.1:+25500146 | MS.gene61140:CDS |
| TGTCAATATGAAGGAGCCAA+AGG | 0.567981 | 8.1:+25498013 | MS.gene61140:CDS |
| GTCAGCAAAATTGCAGCAGA+TGG | 0.568574 | 8.1:+25499284 | MS.gene61140:CDS |
| GACAAGTGGCAAAATAGTCC+AGG | 0.570447 | 8.1:+25499308 | MS.gene61140:CDS |
| AAAATGGCGCACAATACTCA+TGG | 0.571706 | 8.1:+25496898 | MS.gene61140:CDS |
| TCAGCGGTCTCTGAGAAAAG+AGG | 0.571845 | 8.1:+25500115 | MS.gene61140:CDS |
| ACGTTGAACTACTTTACTCA+AGG | 0.573317 | 8.1:-25497199 | None:intergenic |
| GGCAGAGCTATCAAAAGTGA+GGG | 0.588740 | 8.1:+25500234 | MS.gene61140:CDS |
| CAAAATTATGCCAAGTTCAG+CGG | 0.601681 | 8.1:+25500099 | MS.gene61140:CDS |
| AAGCCCCTAACTATTTGTAG+TGG | 0.611891 | 8.1:+25497279 | MS.gene61140:CDS |
| GCGTTCGAATGTAGATCTCA+AGG | 0.619214 | 8.1:+25496949 | MS.gene61140:CDS |
| AAGCTGGAGTAGTCAAACAC+GGG | 0.628346 | 8.1:+25496870 | MS.gene61140:CDS |
| AGGCAGAGCTATCAAAAGTG+AGG | 0.628730 | 8.1:+25500233 | MS.gene61140:CDS |
| GATTGCAGAAGCTGAAGCTG+AGG | 0.636628 | 8.1:+25500354 | MS.gene61140:CDS |
| GGGGATGTCAGCTCAAGAGG+CGG | 0.637055 | 8.1:+25500255 | MS.gene61140:CDS |
| AAGCCCCTGACAATTTCTGG+TGG | 0.637720 | 8.1:+25497240 | MS.gene61140:CDS |
| GGAGCCAAAGGGTTCTGACA+AGG | 0.637821 | 8.1:+25498025 | MS.gene61140:CDS |
| TTGCAGCAGATGGTGACAAG+TGG | 0.648634 | 8.1:+25499294 | MS.gene61140:CDS |
| ATAAATGTCACAGCAATATG+GGG | 0.648999 | 8.1:+25497108 | MS.gene61140:CDS |
| TGTTCCACCAGAAATTGTCA+GGG | 0.649357 | 8.1:-25497244 | None:intergenic |
| ATGGACTGCAGAAGAAGAAG+CGG | 0.652524 | 8.1:+25496841 | MS.gene61140:CDS |
| ATTGTGAACAGGATAAATGG+AGG | 0.664041 | 8.1:+25497082 | MS.gene61140:intron |
| CAGAGCTATCAAAAGTGAGG+GGG | 0.676061 | 8.1:+25500236 | MS.gene61140:CDS |
| AAAGCTGGAGTAGTCAAACA+CGG | 0.681254 | 8.1:+25496869 | MS.gene61140:CDS |
| GTTCCACTACAAATAGTTAG+GGG | 0.682877 | 8.1:-25497282 | None:intergenic |
| GCAGAGCTATCAAAAGTGAG+GGG | 0.684532 | 8.1:+25500235 | MS.gene61140:CDS |
| GTTCCACCAGAAATTGTCAG+GGG | 0.692592 | 8.1:-25497243 | None:intergenic |
| GAGGTCCAAAGATTCTCCGG+AGG | 0.723417 | 8.1:+25500165 | MS.gene61140:CDS |
| AGCTGGAGTAGTCAAACACG+GGG | 0.727088 | 8.1:+25496871 | MS.gene61140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATAGTAGTAATATA+TGG | + | chr8.1:25499041-25499060 | MS.gene61140:intron | 10.0% |
| !! | AGAAAAATAGTAGTAATATA+TGG | + | chr8.1:25498960-25498979 | MS.gene61140:intron | 15.0% |
| !! | TTTATTAATTGTTACCTATA+AGG | + | chr8.1:25497713-25497732 | MS.gene61140:intron | 15.0% |
| !! | AAAAAATTCAGATTCAAACT+AGG | - | chr8.1:25497557-25497576 | None:intergenic | 20.0% |
| !! | AAAAGGAAAACATTTAGTAT+TGG | - | chr8.1:25498897-25498916 | None:intergenic | 20.0% |
| !! | AAAGAGTAAGTGTTTATAAA+AGG | - | chr8.1:25498914-25498933 | None:intergenic | 20.0% |
| !! | AAAGGAAAACATTTAGTATT+GGG | - | chr8.1:25498896-25498915 | None:intergenic | 20.0% |
| !! | AAAGTTGTAGAAATTTATCT+GGG | + | chr8.1:25498855-25498874 | MS.gene61140:intron | 20.0% |
| !! | AATAAATTATTTGATCTTGC+TGG | + | chr8.1:25499852-25499871 | MS.gene61140:intron | 20.0% |
| !! | AGAAATAAAAGATGAAATCA+AGG | + | chr8.1:25498558-25498577 | MS.gene61140:intron | 20.0% |
| !! | CAATTCAAATAAAACTATCA+CGG | - | chr8.1:25499991-25500010 | None:intergenic | 20.0% |
| !! | GTTGACAATGATAAATAAAT+TGG | + | chr8.1:25499894-25499913 | MS.gene61140:intron | 20.0% |
| !! | TAAAGTTGTAGAAATTTATC+TGG | + | chr8.1:25498854-25498873 | MS.gene61140:intron | 20.0% |
| !! | TAAGCATGTTGAAAATATAA+GGG | + | chr8.1:25497681-25497700 | MS.gene61140:intron | 20.0% |
| !! | TCTATTCATTTGTGAAAATT+TGG | - | chr8.1:25497527-25497546 | None:intergenic | 20.0% |
| !!! | GTTTTTCTTATAGTTTTTCT+AGG | - | chr8.1:25499598-25499617 | None:intergenic | 20.0% |
| !!! | TGAATTTTGAGTAATGTTTA+AGG | + | chr8.1:25499080-25499099 | MS.gene61140:intron | 20.0% |
| !!! | TTGATTTCATCTTTTATTTC+TGG | - | chr8.1:25498559-25498578 | None:intergenic | 20.0% |
| ! | AAGCATGTTGAAAATATAAG+GGG | + | chr8.1:25497682-25497701 | MS.gene61140:intron | 25.0% |
| ! | AATGCAAAATGCTTCATATT+TGG | + | chr8.1:25500416-25500435 | MS.gene61140:CDS | 25.0% |
| ! | AATTACTTTCAATGCAATGA+CGG | - | chr8.1:25498326-25498345 | None:intergenic | 25.0% |
| ! | ATATAAATGTCACAGCAATA+TGG | + | chr8.1:25497106-25497125 | MS.gene61140:CDS | 25.0% |
| ! | CAACTGAATATAAAATTACC+TGG | - | chr8.1:25499329-25499348 | None:intergenic | 25.0% |
| ! | CCCAACTAATAAACAAAATT+CGG | + | chr8.1:25500020-25500039 | MS.gene61140:intron | 25.0% |
| ! | CTGTTAATGTCTTTCAATAA+TGG | + | chr8.1:25498986-25499005 | MS.gene61140:intron | 25.0% |
| ! | GTAAGCATGTTGAAAATATA+AGG | + | chr8.1:25497680-25497699 | MS.gene61140:intron | 25.0% |
| ! | TAAAAAAGATGGTAGAAACT+TGG | + | chr8.1:25499476-25499495 | MS.gene61140:intron | 25.0% |
| ! | TATAAATGTCACAGCAATAT+GGG | + | chr8.1:25497107-25497126 | MS.gene61140:CDS | 25.0% |
| ! | TGAAAATATAAGGGGAAAAA+AGG | + | chr8.1:25497690-25497709 | MS.gene61140:intron | 25.0% |
| ! | TTAAAAGTTACCTGTGATTT+AGG | + | chr8.1:25498235-25498254 | MS.gene61140:intron | 25.0% |
| !! | AAAGATGAAATCAAGGATTT+TGG | + | chr8.1:25498565-25498584 | MS.gene61140:intron | 25.0% |
| !! | AATTGGTTATTGTCAGTTTT+GGG | - | chr8.1:25497177-25497196 | None:intergenic | 25.0% |
| !! | ACTTTTCATTTCATCTCTAT+AGG | + | chr8.1:25498351-25498370 | MS.gene61140:intron | 25.0% |
| !! | ATGAAACACTTTAGTCTTTA+AGG | - | chr8.1:25499814-25499833 | None:intergenic | 25.0% |
| !! | CAGGTAATTTTATATTCAGT+TGG | + | chr8.1:25499327-25499346 | MS.gene61140:intron | 25.0% |
| !! | TATCTTTATGTATTTCTGCT+AGG | - | chr8.1:25496993-25497012 | None:intergenic | 25.0% |
| !!! | AATAACTTTCTAAGATTTGG+TGG | - | chr8.1:25499264-25499283 | None:intergenic | 25.0% |
| !!! | ACCGAATTTTGTTTATTAGT+TGG | - | chr8.1:25500024-25500043 | None:intergenic | 25.0% |
| !!! | CCGAATTTTGTTTATTAGTT+GGG | - | chr8.1:25500023-25500042 | None:intergenic | 25.0% |
| !!! | GACAATAACTTTCTAAGATT+TGG | - | chr8.1:25499267-25499286 | None:intergenic | 25.0% |
| !!! | TGATTGCATTATGCTTTTTT+GGG | - | chr8.1:25498175-25498194 | None:intergenic | 25.0% |
| !!! | TTATTTTATTGCTCAAGTAG+AGG | - | chr8.1:25499028-25499047 | None:intergenic | 25.0% |
| !!! | TTCATCTTTTATTTCTGGAT+CGG | - | chr8.1:25498554-25498573 | None:intergenic | 25.0% |
| ACTAGACCTAATTACTCATA+AGG | - | chr8.1:25497478-25497497 | None:intergenic | 30.0% | |
| AGAAATTATCTCCATGATTG+TGG | + | chr8.1:25497389-25497408 | MS.gene61140:intron | 30.0% | |
| AGGGATATGATAGAACATTA+CGG | + | chr8.1:25499652-25499671 | MS.gene61140:intron | 30.0% | |
| ATAAATGTCACAGCAATATG+GGG | + | chr8.1:25497108-25497127 | MS.gene61140:CDS | 30.0% | |
| ATGTTCCACTACAAATAGTT+AGG | - | chr8.1:25497287-25497306 | None:intergenic | 30.0% | |
| ATTACTTTCAATGCAATGAC+GGG | - | chr8.1:25498325-25498344 | None:intergenic | 30.0% | |
| ATTGACCATGTCTATTACAA+AGG | - | chr8.1:25499770-25499789 | None:intergenic | 30.0% | |
| ATTGTTACCTATAAGGAGTA+AGG | + | chr8.1:25497720-25497739 | MS.gene61140:intron | 30.0% | |
| CAAAACTGACAATAACCAAT+TGG | + | chr8.1:25497176-25497195 | MS.gene61140:CDS | 30.0% | |
| CTAGACCTAATTACTCATAA+GGG | - | chr8.1:25497477-25497496 | None:intergenic | 30.0% | |
| GCTTAGGATGTATTAAATTG+CGG | - | chr8.1:25497916-25497935 | None:intergenic | 30.0% | |
| GGTATGTGATAAGTTTATCA+TGG | + | chr8.1:25500041-25500060 | MS.gene61140:intron | 30.0% | |
| GTAAACCTTTGTAATAGACA+TGG | + | chr8.1:25499762-25499781 | MS.gene61140:intron | 30.0% | |
| GTTCAAAAGAACAAGTATCA+AGG | + | chr8.1:25497319-25497338 | MS.gene61140:CDS | 30.0% | |
| TAGACCTAATTACTCATAAG+GGG | - | chr8.1:25497476-25497495 | None:intergenic | 30.0% | |
| TGGAAGTAATGAACAGAAAA+TGG | + | chr8.1:25499872-25499891 | MS.gene61140:intron | 30.0% | |
| TGTATTGTGAACAGGATAAA+TGG | + | chr8.1:25497079-25497098 | MS.gene61140:intron | 30.0% | |
| TGTTCCACTACAAATAGTTA+GGG | - | chr8.1:25497286-25497305 | None:intergenic | 30.0% | |
| TTGTTACCTATAAGGAGTAA+GGG | + | chr8.1:25497721-25497740 | MS.gene61140:intron | 30.0% | |
| TTTATATTCAGTTGGATGTG+TGG | + | chr8.1:25499335-25499354 | MS.gene61140:intron | 30.0% | |
| TTTCTTATCACAAGCATACA+AGG | - | chr8.1:25497890-25497909 | None:intergenic | 30.0% | |
| ! | ATTGGTTATTGTCAGTTTTG+GGG | - | chr8.1:25497176-25497195 | None:intergenic | 30.0% |
| ! | CAATTGGTTATTGTCAGTTT+TGG | - | chr8.1:25497178-25497197 | None:intergenic | 30.0% |
| ! | GATACTTGTTCTTTTGAACT+AGG | - | chr8.1:25497318-25497337 | None:intergenic | 30.0% |
| ! | TGAGGTACTACAAAAAATGA+AGG | - | chr8.1:25497647-25497666 | None:intergenic | 30.0% |
| ! | TTATTTTCCCCTCTTTACAA+TGG | + | chr8.1:25498145-25498164 | MS.gene61140:intron | 30.0% |
| !! | ACAAAGGTGCTATAAAATGA+AGG | - | chr8.1:25497609-25497628 | None:intergenic | 30.0% |
| !!! | CTGATTGCATTATGCTTTTT+TGG | - | chr8.1:25498176-25498195 | None:intergenic | 30.0% |
| !!! | TCTACCATCTTTTTTACGAT+AGG | - | chr8.1:25499472-25499491 | None:intergenic | 30.0% |
| AAGAAGAAGAAGACAGATCA+AGG | + | chr8.1:25498712-25498731 | MS.gene61140:intron | 35.0% | |
| AATAGACATGGTCAATGATC+TGG | + | chr8.1:25499774-25499793 | MS.gene61140:intron | 35.0% | |
| AATTTCCGCTTTGACAACTA+TGG | + | chr8.1:25499235-25499254 | MS.gene61140:intron | 35.0% | |
| ACGTTGAACTACTTTACTCA+AGG | - | chr8.1:25497202-25497221 | None:intergenic | 35.0% | |
| AGAGGCTATTGTCAATATGA+AGG | + | chr8.1:25498004-25498023 | MS.gene61140:CDS | 35.0% | |
| AGATCTAGAGATCAATGAGT+TGG | + | chr8.1:25499627-25499646 | MS.gene61140:intron | 35.0% | |
| AGCACCTATCGTAAAAAAGA+TGG | + | chr8.1:25499465-25499484 | MS.gene61140:intron | 35.0% | |
| AGTACAAGTAGATCAGATGA+AGG | + | chr8.1:25499543-25499562 | MS.gene61140:intron | 35.0% | |
| ATTGTGAACAGGATAAATGG+AGG | + | chr8.1:25497082-25497101 | MS.gene61140:intron | 35.0% | |
| CAAAATTATGCCAAGTTCAG+CGG | + | chr8.1:25500099-25500118 | MS.gene61140:CDS | 35.0% | |
| CCTTTCAAAATCCCAAATTG+AGG | + | chr8.1:25500213-25500232 | MS.gene61140:CDS | 35.0% | |
| CTTACAGAAAAACTGCTATG+AGG | - | chr8.1:25497665-25497684 | None:intergenic | 35.0% | |
| GGGAGACAATAATGTATTAG+AGG | + | chr8.1:25497986-25498005 | MS.gene61140:CDS | 35.0% | |
| GTACAAGTAGATCAGATGAA+GGG | + | chr8.1:25499544-25499563 | MS.gene61140:intron | 35.0% | |
| GTATGCTTTGTATTGTGAAC+AGG | + | chr8.1:25497071-25497090 | MS.gene61140:intron | 35.0% | |
| GTTCCACTACAAATAGTTAG+GGG | - | chr8.1:25497285-25497304 | None:intergenic | 35.0% | |
| TAAGATATGCAGCAAATGCA+TGG | - | chr8.1:25498212-25498231 | None:intergenic | 35.0% | |
| TACACCCCTTATGAGTAATT+AGG | + | chr8.1:25497469-25497488 | MS.gene61140:intron | 35.0% | |
| TACCTCTATGTAAGAAGCAA+TGG | - | chr8.1:25498054-25498073 | None:intergenic | 35.0% | |
| TAGAAAGAGAAAGAGAGAAG+CGG | + | chr8.1:25498787-25498806 | MS.gene61140:intron | 35.0% | |
| TAGTTGTCAAAGCGGAAATT+CGG | - | chr8.1:25499235-25499254 | None:intergenic | 35.0% | |
| TCAAGATTAAGATGCAGCTT+AGG | - | chr8.1:25497932-25497951 | None:intergenic | 35.0% | |
| TGTAAAGAGGGGAAAATAAC+AGG | - | chr8.1:25498144-25498163 | None:intergenic | 35.0% | |
| TTACTTTCAATGCAATGACG+GGG | - | chr8.1:25498324-25498343 | None:intergenic | 35.0% | |
| ! | AAGCATTGTATTGCTAGTAG+TGG | - | chr8.1:25498290-25498309 | None:intergenic | 35.0% |
| ! | AGAGATCAATGAGTTGGATA+GGG | + | chr8.1:25499633-25499652 | MS.gene61140:intron | 35.0% |
| ! | CATTTTATAGCACCTTTGTG+AGG | + | chr8.1:25497610-25497629 | MS.gene61140:intron | 35.0% |
| ! | TAGAGATCAATGAGTTGGAT+AGG | + | chr8.1:25499632-25499651 | MS.gene61140:intron | 35.0% |
| !! | AAGCTTTATTCCACTAAGTG+GGG | - | chr8.1:25499701-25499720 | None:intergenic | 35.0% |
| !! | ACAAGCTTTATTCCACTAAG+TGG | - | chr8.1:25499703-25499722 | None:intergenic | 35.0% |
| !! | CAAGCTTTATTCCACTAAGT+GGG | - | chr8.1:25499702-25499721 | None:intergenic | 35.0% |
| !! | CCTCAATTTGGGATTTTGAA+AGG | - | chr8.1:25500216-25500235 | None:intergenic | 35.0% |
| !! | TTGGTTATTGTCAGTTTTGG+GGG | - | chr8.1:25497175-25497194 | None:intergenic | 35.0% |
| AAAATGGCGCACAATACTCA+TGG | + | chr8.1:25496898-25496917 | MS.gene61140:CDS | 40.0% | |
| AAACTTGGCTTAGGTGGTTT+GGG | + | chr8.1:25499491-25499510 | MS.gene61140:intron | 40.0% | |
| AAAGCTGGAGTAGTCAAACA+CGG | + | chr8.1:25496869-25496888 | MS.gene61140:CDS | 40.0% | |
| AAGAAGACAGATCAAGGATG+AGG | + | chr8.1:25498718-25498737 | MS.gene61140:intron | 40.0% | |
| AAGCCCCTAACTATTTGTAG+TGG | + | chr8.1:25497279-25497298 | MS.gene61140:CDS | 40.0% | |
| AAGGGTTGTCAAATCACTAG+AGG | + | chr8.1:25499562-25499581 | MS.gene61140:intron | 40.0% | |
| AGAAATTTATCTGGGCCCTA+GGG | + | chr8.1:25498863-25498882 | MS.gene61140:intron | 40.0% | |
| AGACCTTGTTAACTGTGCAA+TGG | + | chr8.1:25497778-25497797 | MS.gene61140:intron | 40.0% | |
| AGATGGTAGAAACTTGGCTT+AGG | + | chr8.1:25499482-25499501 | MS.gene61140:intron | 40.0% | |
| AGGAAGACTGTCATCAAACT+AGG | + | chr8.1:25498830-25498849 | MS.gene61140:intron | 40.0% | |
| AGGAATGAAGATGAAACGCA+TGG | + | chr8.1:25498738-25498757 | MS.gene61140:intron | 40.0% | |
| AGTTACCTGTGATTTAGGCT+TGG | + | chr8.1:25498240-25498259 | MS.gene61140:intron | 40.0% | |
| ATGTCTTAATGATGGCAGGT+TGG | + | chr8.1:25497965-25497984 | MS.gene61140:intron | 40.0% | |
| ATGTTCCACCAGAAATTGTC+AGG | - | chr8.1:25497248-25497267 | None:intergenic | 40.0% | |
| ATTAAGCCCCTGACAATTTC+TGG | + | chr8.1:25497237-25497256 | MS.gene61140:CDS | 40.0% | |
| CTACAAATAGTTAGGGGCTT+AGG | - | chr8.1:25497279-25497298 | None:intergenic | 40.0% | |
| CTACTTTACTCAAGGCCAAT+TGG | - | chr8.1:25497194-25497213 | None:intergenic | 40.0% | |
| GAACCATTGCACAGTTAACA+AGG | - | chr8.1:25497784-25497803 | None:intergenic | 40.0% | |
| GAGAGAGAAGTAGAAATGCA+TGG | + | chr8.1:25498685-25498704 | MS.gene61140:intron | 40.0% | |
| GCAATGACATATACGTTGAC+AGG | + | chr8.1:25500063-25500082 | MS.gene61140:intron | 40.0% | |
| GCCATCATTAAGACATGCAA+TGG | - | chr8.1:25497961-25497980 | None:intergenic | 40.0% | |
| GCCATTGCATGTCTTAATGA+TGG | + | chr8.1:25497957-25497976 | MS.gene61140:intron | 40.0% | |
| GTCAATATGAAGGAGCCAAA+GGG | + | chr8.1:25498014-25498033 | MS.gene61140:CDS | 40.0% | |
| TACCTATAAGGAGTAAGGGA+AGG | + | chr8.1:25497725-25497744 | MS.gene61140:intron | 40.0% | |
| TAGAAATTTATCTGGGCCCT+AGG | + | chr8.1:25498862-25498881 | MS.gene61140:intron | 40.0% | |
| TGCCATTGCTTCTTACATAG+AGG | + | chr8.1:25498049-25498068 | MS.gene61140:CDS | 40.0% | |
| TGCCGAAAAAAACGCTATCT+CGG | - | chr8.1:25498432-25498451 | None:intergenic | 40.0% | |
| TGTCAATATGAAGGAGCCAA+AGG | + | chr8.1:25498013-25498032 | MS.gene61140:CDS | 40.0% | |
| TGTCTTAATGATGGCAGGTT+GGG | + | chr8.1:25497966-25497985 | MS.gene61140:intron | 40.0% | |
| TGTTCCACCAGAAATTGTCA+GGG | - | chr8.1:25497247-25497266 | None:intergenic | 40.0% | |
| TTCCTTCCCTTACTCCTTAT+AGG | - | chr8.1:25497730-25497749 | None:intergenic | 40.0% | |
| TTGCATGTCTTAATGATGGC+AGG | + | chr8.1:25497961-25497980 | MS.gene61140:intron | 40.0% | |
| ! | CTTTTATGTGCAGTCTCACT+TGG | + | chr8.1:25498108-25498127 | MS.gene61140:intron | 40.0% |
| ! | TGATAGCTCTGCCTCAATTT+GGG | - | chr8.1:25500227-25500246 | None:intergenic | 40.0% |
| ! | TTGATAGCTCTGCCTCAATT+TGG | - | chr8.1:25500228-25500247 | None:intergenic | 40.0% |
| AAGCTCTTCTCTGATGCTTG+TGG | + | chr8.1:25500138-25500157 | MS.gene61140:CDS | 45.0% | |
| AAGCTGGAGTAGTCAAACAC+GGG | + | chr8.1:25496870-25496889 | MS.gene61140:CDS | 45.0% | |
| AGAGAGAGAGAGAGAGAATC+GGG | + | chr8.1:25499440-25499459 | MS.gene61140:intron | 45.0% | |
| AGGCAGAGCTATCAAAAGTG+AGG | + | chr8.1:25500233-25500252 | MS.gene61140:CDS | 45.0% | |
| ATCTCCATGATTGTGGTGCT+TGG | + | chr8.1:25497396-25497415 | MS.gene61140:intron | 45.0% | |
| ATGAAGATGAAACGCATGGC+TGG | + | chr8.1:25498742-25498761 | MS.gene61140:intron | 45.0% | |
| ATGCTCCAAGCCTAAATCAC+AGG | - | chr8.1:25498248-25498267 | None:intergenic | 45.0% | |
| ATTCGAACGCGTACGCAAAA+TGG | - | chr8.1:25496939-25496958 | None:intergenic | 45.0% | |
| CAAACCAAGCACCACAATCA+TGG | - | chr8.1:25497403-25497422 | None:intergenic | 45.0% | |
| CAGAGCTATCAAAAGTGAGG+GGG | + | chr8.1:25500236-25500255 | MS.gene61140:CDS | 45.0% | |
| CGCAAAATGGAACTGAACTC+AGG | - | chr8.1:25496926-25496945 | None:intergenic | 45.0% | |
| CTTCCTTCTTTCCTCATGTG+CGG | - | chr8.1:25498816-25498835 | None:intergenic | 45.0% | |
| CTTTGCAAAAGCAGCGATGA+AGG | + | chr8.1:25500387-25500406 | MS.gene61140:CDS | 45.0% | |
| GAAACTTGGCTTAGGTGGTT+TGG | + | chr8.1:25499490-25499509 | MS.gene61140:intron | 45.0% | |
| GAAATTTATCTGGGCCCTAG+GGG | + | chr8.1:25498864-25498883 | MS.gene61140:intron | 45.0% | |
| GACAAGTGGCAAAATAGTCC+AGG | + | chr8.1:25499308-25499327 | MS.gene61140:CDS | 45.0% | |
| GAGAAGTAGAAATGCATGGC+TGG | + | chr8.1:25498689-25498708 | MS.gene61140:intron | 45.0% | |
| GAGAGAGAGAGAGAGAGAAT+CGG | + | chr8.1:25499439-25499458 | MS.gene61140:intron | 45.0% | |
| GCAGAGCTATCAAAAGTGAG+GGG | + | chr8.1:25500235-25500254 | MS.gene61140:CDS | 45.0% | |
| GCCGAAAAAAACGCTATCTC+GGG | - | chr8.1:25498431-25498450 | None:intergenic | 45.0% | |
| GCGTTCGAATGTAGATCTCA+AGG | + | chr8.1:25496949-25496968 | MS.gene61140:CDS | 45.0% | |
| GCTGGAAGAAGAAGAAGACA+GGG | + | chr8.1:25498707-25498726 | MS.gene61140:intron | 45.0% | |
| GGACACCATAGTTGTCAAAG+CGG | - | chr8.1:25499243-25499262 | None:intergenic | 45.0% | |
| GGCAGAGCTATCAAAAGTGA+GGG | + | chr8.1:25500234-25500253 | MS.gene61140:CDS | 45.0% | |
| GTCAGCAAAATTGCAGCAGA+TGG | + | chr8.1:25499284-25499303 | MS.gene61140:CDS | 45.0% | |
| GTTCCACCAGAAATTGTCAG+GGG | - | chr8.1:25497246-25497265 | None:intergenic | 45.0% | |
| TCTGCAGTCCATTTCTGCTT+AGG | - | chr8.1:25496833-25496852 | None:intergenic | 45.0% | |
| TGGTAGAAACTTGGCTTAGG+TGG | + | chr8.1:25499485-25499504 | MS.gene61140:intron | 45.0% | |
| ! | ATGGACTGCAGAAGAAGAAG+CGG | + | chr8.1:25496841-25496860 | MS.gene61140:CDS | 45.0% |
| ! | TAGCACCTTTGTGAGGTATC+TGG | + | chr8.1:25497617-25497636 | MS.gene61140:intron | 45.0% |
| ! | TGGGTGTGCCATTGTAAAGA+GGG | - | chr8.1:25498156-25498175 | None:intergenic | 45.0% |
| ! | TTGGGTGTGCCATTGTAAAG+AGG | - | chr8.1:25498157-25498176 | None:intergenic | 45.0% |
| !!! | GCCCGAGATAGCGTTTTTTT+CGG | + | chr8.1:25498427-25498446 | MS.gene61140:intron | 45.0% |
| !!! | TTATTGTCAGTTTTGGGGGC+TGG | - | chr8.1:25497171-25497190 | None:intergenic | 45.0% |
| ACTAAGTGGGGTCAGCTACA+TGG | - | chr8.1:25499689-25499708 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr8.1:25498599-25498618 | MS.gene61140:intron | 50.0% | |
| AGCGAGGTCCAAAGATTCTC+CGG | + | chr8.1:25500162-25500181 | MS.gene61140:CDS | 50.0% | |
| AGCTGCAAAAGCAGTTGCAG+AGG | + | chr8.1:25500285-25500304 | MS.gene61140:CDS | 50.0% | |
| AGCTGGAGTAGTCAAACACG+GGG | + | chr8.1:25496871-25496890 | MS.gene61140:CDS | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | + | chr8.1:25499688-25499707 | MS.gene61140:intron | 50.0% | |
| GAGAGAGAGAGAGAGAATCG+GGG | + | chr8.1:25499441-25499460 | MS.gene61140:intron | 50.0% | |
| GATCGCCAGATACCTCACAA+AGG | - | chr8.1:25497625-25497644 | None:intergenic | 50.0% | |
| GATTGCAGAAGCTGAAGCTG+AGG | + | chr8.1:25500354-25500373 | MS.gene61140:CDS | 50.0% | |
| GGCGCTATTGACAACTATGG+TGG | - | chr8.1:25498391-25498410 | None:intergenic | 50.0% | |
| GGCTGGAAGAAGAAGAAGAC+AGG | + | chr8.1:25498706-25498725 | MS.gene61140:intron | 50.0% | |
| TCAAACACGGGGCTGGAAAA+TGG | + | chr8.1:25496882-25496901 | MS.gene61140:CDS | 50.0% | |
| TCACACATCTTCTCCACCTC+CGG | - | chr8.1:25500184-25500203 | None:intergenic | 50.0% | |
| TCACAGCAATATGGGGATCC+CGG | + | chr8.1:25497115-25497134 | MS.gene61140:CDS | 50.0% | |
| TGGGTGCTCCTAAGCAGAAA+TGG | + | chr8.1:25496822-25496841 | MS.gene61140:CDS | 50.0% | |
| TTCTCAGAGACCGCTGAACT+TGG | - | chr8.1:25500112-25500131 | None:intergenic | 50.0% | |
| TTGCAGCAGATGGTGACAAG+TGG | + | chr8.1:25499294-25499313 | MS.gene61140:CDS | 50.0% | |
| ! | AAGCCCCTGACAATTTCTGG+TGG | + | chr8.1:25497240-25497259 | MS.gene61140:CDS | 50.0% |
| ! | GCTTTTGACCGCATCAAGAC+CGG | - | chr8.1:25498530-25498549 | None:intergenic | 50.0% |
| ! | GGCAAGTTTTGCTTTCTGCC+GGG | - | chr8.1:25497136-25497155 | None:intergenic | 50.0% |
| ! | GGGCAAGTTTTGCTTTCTGC+CGG | - | chr8.1:25497137-25497156 | None:intergenic | 50.0% |
| ! | GGGTGTGCCATTGTAAAGAG+GGG | - | chr8.1:25498155-25498174 | None:intergenic | 50.0% |
| ! | TCAGCGGTCTCTGAGAAAAG+AGG | + | chr8.1:25500115-25500134 | MS.gene61140:CDS | 50.0% |
| AGCGTGTCTAGTGGTGGTAG+CGG | + | chr8.1:25498474-25498493 | MS.gene61140:intron | 55.0% | |
| CAGCCGCACATGAGGAAAGA+AGG | + | chr8.1:25498810-25498829 | MS.gene61140:intron | 55.0% | |
| CGCGGCGCTATTGACAACTA+TGG | - | chr8.1:25498394-25498413 | None:intergenic | 55.0% | |
| CTCCACCTCCGGAGAATCTT+TGG | - | chr8.1:25500173-25500192 | None:intergenic | 55.0% | |
| CTCTGATGCTTGTGGAAGCG+AGG | + | chr8.1:25500146-25500165 | MS.gene61140:CDS | 55.0% | |
| GAGGTCCAAAGATTCTCCGG+AGG | + | chr8.1:25500165-25500184 | MS.gene61140:CDS | 55.0% | |
| GGCAGAAGTTGCCATTGCAC+AGG | + | chr8.1:25500306-25500325 | MS.gene61140:CDS | 55.0% | |
| GGCCACCCCAAAAATTGACG+CGG | - | chr8.1:25499204-25499223 | None:intergenic | 55.0% | |
| GTATTGGGCCTTAGCCCCTA+GGG | - | chr8.1:25498881-25498900 | None:intergenic | 55.0% | |
| GTCAAAGCGGAAATTCGGCG+CGG | - | chr8.1:25499230-25499249 | None:intergenic | 55.0% | |
| GTCCAAAGATTCTCCGGAGG+TGG | + | chr8.1:25500168-25500187 | MS.gene61140:CDS | 55.0% | |
| TACCACCACTAGACACGCTC+CGG | - | chr8.1:25498473-25498492 | None:intergenic | 55.0% | |
| ! | AGTATTGGGCCTTAGCCCCT+AGG | - | chr8.1:25498882-25498901 | None:intergenic | 55.0% |
| ! | GAAGAAGCGGCGTTGAAAGC+TGG | + | chr8.1:25496854-25496873 | MS.gene61140:CDS | 55.0% |
| ! | GCAGCCTTGTCAGAACCCTT+TGG | - | chr8.1:25498032-25498051 | None:intergenic | 55.0% |
| ! | GGAGCCAAAGGGTTCTGACA+AGG | + | chr8.1:25498025-25498044 | MS.gene61140:CDS | 55.0% |
| !! | GCGGGCGATATTTGATGACG+CGG | - | chr8.1:25499162-25499181 | None:intergenic | 55.0% |
| !! | GTGGTGGTAGCGGTCAATTG+CGG | + | chr8.1:25498484-25498503 | MS.gene61140:intron | 55.0% |
| !!! | TGTCAGTTTTGGGGGCTGGA+AGG | - | chr8.1:25497167-25497186 | None:intergenic | 55.0% |
| ACAGGCCGAAGCAGCAGCTA+GGG | + | chr8.1:25500324-25500343 | MS.gene61140:CDS | 60.0% | |
| CCCAAAAATTGACGCGGCGC+GGG | - | chr8.1:25499198-25499217 | None:intergenic | 60.0% | |
| CCCCAAAAATTGACGCGGCG+CGG | - | chr8.1:25499199-25499218 | None:intergenic | 60.0% | |
| GAGGGGGATGTCAGCTCAAG+AGG | + | chr8.1:25500252-25500271 | MS.gene61140:CDS | 60.0% | |
| GGAGTAGTCAAACACGGGGC+TGG | + | chr8.1:25496875-25496894 | MS.gene61140:CDS | 60.0% | |
| GGGGATGTCAGCTCAAGAGG+CGG | + | chr8.1:25500255-25500274 | MS.gene61140:CDS | 60.0% | |
| GGGGGCTGGAAGGCTCTTAA+GGG | - | chr8.1:25497157-25497176 | None:intergenic | 60.0% | |
| TATCTGGGCCCTAGGGGCTA+AGG | + | chr8.1:25498870-25498889 | MS.gene61140:intron | 60.0% | |
| TGGGGGCTGGAAGGCTCTTA+AGG | - | chr8.1:25497158-25497177 | None:intergenic | 60.0% | |
| ! | ACCTCCGCGTTGATCTGTGC+CGG | + | chr8.1:25498451-25498470 | MS.gene61140:intron | 60.0% |
| ! | CCCGCGCCGCGTCAATTTTT+GGG | + | chr8.1:25499195-25499214 | MS.gene61140:intron | 60.0% |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | + | chr8.1:25499196-25499215 | MS.gene61140:intron | 60.0% |
| ! | TCCCGCGCCGCGTCAATTTT+TGG | + | chr8.1:25499194-25499213 | MS.gene61140:intron | 60.0% |
| ! | TGCTGCTTCGGCCTGTGCAA+TGG | - | chr8.1:25500320-25500339 | None:intergenic | 60.0% |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | + | chr8.1:25499199-25499218 | MS.gene61140:intron | 60.0% |
| AATTGACGCGGCGCGGGATG+CGG | - | chr8.1:25499192-25499211 | None:intergenic | 65.0% | |
| ACGCTATCTCGGGCGCGAAG+CGG | - | chr8.1:25498421-25498440 | None:intergenic | 65.0% | |
| AGAAGCGGCAGCCGCACATG+AGG | + | chr8.1:25498802-25498821 | MS.gene61140:intron | 65.0% | |
| CACAGGCCGAAGCAGCAGCT+AGG | + | chr8.1:25500323-25500342 | MS.gene61140:CDS | 65.0% | |
| CGAAGCAGCAGCTAGGGAGG+CGG | + | chr8.1:25500330-25500349 | MS.gene61140:CDS | 65.0% | |
| CGCTCCGGCACAGATCAACG+CGG | - | chr8.1:25498458-25498477 | None:intergenic | 65.0% | |
| CTGTGCCGGAGCGTGTCTAG+TGG | + | chr8.1:25498465-25498484 | MS.gene61140:intron | 65.0% | |
| GATGCGGGCCGGTCTTGATG+CGG | + | chr8.1:25498519-25498538 | MS.gene61140:intron | 65.0% | |
| TCCGGCACAGATCAACGCGG+AGG | - | chr8.1:25498455-25498474 | None:intergenic | 65.0% | |
| TGCCGGAGCGTGTCTAGTGG+TGG | + | chr8.1:25498468-25498487 | MS.gene61140:intron | 65.0% | |
| ! | CGCCTCCCTAGCTGCTGCTT+CGG | - | chr8.1:25500332-25500351 | None:intergenic | 65.0% |
| ! | CGCTTTTCGTCGATGCGGGC+CGG | + | chr8.1:25498508-25498527 | MS.gene61140:intron | 65.0% |
| ! | CGGCCCGCATCGACGAAAAG+CGG | - | chr8.1:25498510-25498529 | None:intergenic | 65.0% |
| !!! | CGGCCGCTTTTCGTCGATGC+GGG | + | chr8.1:25498504-25498523 | MS.gene61140:intron | 65.0% |
| !!! | GCGGCCGCTTTTCGTCGATG+CGG | + | chr8.1:25498503-25498522 | MS.gene61140:intron | 65.0% |
| AGCGGAAATTCGGCGCGGCG+CGG | - | chr8.1:25499225-25499244 | None:intergenic | 70.0% | |
| ATTGACGCGGCGCGGGATGC+GGG | - | chr8.1:25499191-25499210 | None:intergenic | 70.0% | |
| CGCTATCTCGGGCGCGAAGC+GGG | - | chr8.1:25498420-25498439 | None:intergenic | 70.0% | |
| GGCCGAAGCAGCAGCTAGGG+AGG | + | chr8.1:25500327-25500346 | MS.gene61140:CDS | 70.0% | |
| TATCTCGGGCGCGAAGCGGG+CGG | - | chr8.1:25498417-25498436 | None:intergenic | 70.0% | |
| CGCGGGATGCGGGAGCGAAG+CGG | - | chr8.1:25499181-25499200 | None:intergenic | 75.0% | |
| GCGGGATGCGGGAGCGAAGC+GGG | - | chr8.1:25499180-25499199 | None:intergenic | 75.0% | |
| ! | CGGGCGCGAAGCGGGCGGCG+CGG | - | chr8.1:25498412-25498431 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 25496821 | 25500441 | 25496821 | ID=MS.gene61140 |
| chr8.1 | mRNA | 25496821 | 25500441 | 25496821 | ID=MS.gene61140.t1;Parent=MS.gene61140 |
| chr8.1 | exon | 25496821 | 25496970 | 25496821 | ID=MS.gene61140.t1.exon1;Parent=MS.gene61140.t1 |
| chr8.1 | CDS | 25496821 | 25496970 | 25496821 | ID=cds.MS.gene61140.t1;Parent=MS.gene61140.t1 |
| chr8.1 | exon | 25497093 | 25497340 | 25497093 | ID=MS.gene61140.t1.exon2;Parent=MS.gene61140.t1 |
| chr8.1 | CDS | 25497093 | 25497340 | 25497093 | ID=cds.MS.gene61140.t1;Parent=MS.gene61140.t1 |
| chr8.1 | exon | 25497983 | 25498070 | 25497983 | ID=MS.gene61140.t1.exon3;Parent=MS.gene61140.t1 |
| chr8.1 | CDS | 25497983 | 25498070 | 25497983 | ID=cds.MS.gene61140.t1;Parent=MS.gene61140.t1 |
| chr8.1 | exon | 25499279 | 25499329 | 25499279 | ID=MS.gene61140.t1.exon4;Parent=MS.gene61140.t1 |
| chr8.1 | CDS | 25499279 | 25499329 | 25499279 | ID=cds.MS.gene61140.t1;Parent=MS.gene61140.t1 |
| chr8.1 | exon | 25500085 | 25500441 | 25500085 | ID=MS.gene61140.t1.exon5;Parent=MS.gene61140.t1 |
| chr8.1 | CDS | 25500085 | 25500441 | 25500085 | ID=cds.MS.gene61140.t1;Parent=MS.gene61140.t1 |
| Gene Sequence |
| Protein sequence |
