AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61186

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61186.t1 MTR_1g013170 93.186 499 32 2 2 500 1 497 0.0 902
MS.gene61186.t1 MTR_1g013180 65.134 522 104 12 2 499 152 619 0.0 597
MS.gene61186.t1 MTR_7g117705 58.282 489 103 13 2 488 1 390 2.43e-164 473
MS.gene61186.t1 MTR_3g106220 47.297 592 197 17 4 500 6 577 7.45e-152 448
MS.gene61186.t1 MTR_2g450070 44.266 497 222 14 4 455 16 502 1.18e-110 342
MS.gene61186.t1 MTR_2g450070 44.266 497 222 14 4 455 16 502 2.82e-110 342
MS.gene61186.t1 MTR_4g131600 50.000 342 150 7 1 339 15 338 4.14e-95 300
MS.gene61186.t1 MTR_4g121020 57.422 256 107 2 3 258 28 281 7.04e-93 296
MS.gene61186.t1 MTR_4g121020 57.422 256 107 2 3 258 28 281 8.01e-93 296
MS.gene61186.t1 MTR_2g034960 51.361 294 132 3 1 290 24 310 1.47e-92 294
MS.gene61186.t1 MTR_4g131580 47.527 364 171 8 6 362 17 367 8.73e-92 292
MS.gene61186.t1 MTR_4g131570 47.493 339 162 7 1 336 12 337 4.45e-91 290
MS.gene61186.t1 MTR_1g032570 54.135 266 105 3 5 260 10 268 2.78e-90 288
MS.gene61186.t1 MTR_8g079940 56.589 258 102 3 4 257 23 274 1.75e-85 273
MS.gene61186.t1 MTR_1g013160 94.595 148 8 0 68 215 1 148 2.66e-83 255
MS.gene61186.t1 MTR_3g086100 55.823 249 102 2 6 250 13 257 1.06e-82 267
MS.gene61186.t1 MTR_3g102590 51.866 268 72 4 3 267 5 218 1.26e-74 235
MS.gene61186.t1 MTR_3g102590 54.167 240 57 2 3 241 5 192 1.90e-69 220
MS.gene61186.t1 MTR_1g032570 53.398 206 79 3 65 260 1 199 3.73e-63 215
MS.gene61186.t1 MTR_3g102600 41.956 317 84 7 2 318 4 220 7.00e-61 199
MS.gene61186.t1 MTR_3g086100 54.211 190 79 2 65 250 1 186 1.39e-56 196
MS.gene61186.t1 MTR_3g102600 46.888 241 66 4 3 243 5 183 1.73e-54 181
MS.gene61186.t1 MTR_4g021760 39.326 267 132 4 6 272 11 247 2.08e-54 185
MS.gene61186.t1 MTR_4g021790 39.676 247 121 4 3 249 7 225 1.78e-48 168
MS.gene61186.t1 MTR_4g021855 38.462 247 124 3 3 249 7 225 1.89e-48 169
MS.gene61186.t1 MTR_4g021845 38.494 239 119 4 3 241 7 217 8.11e-47 162
MS.gene61186.t1 MTR_4g121020 49.425 174 86 2 85 258 6 177 3.22e-46 170
MS.gene61186.t1 MTR_0450s0040 38.174 241 128 3 10 250 8 227 8.21e-44 158
MS.gene61186.t1 MTR_3g102600 37.269 271 70 7 48 318 1 171 2.34e-41 146
MS.gene61186.t1 MTR_8g105600 36.101 277 150 6 6 275 9 265 3.06e-39 150
MS.gene61186.t1 MTR_7g026400 36.986 219 122 2 33 251 14 216 1.36e-37 146
MS.gene61186.t1 MTR_6g045327 34.286 245 131 3 5 248 13 228 4.61e-37 140
MS.gene61186.t1 MTR_3g102600 67.857 84 27 0 48 131 1 84 1.76e-33 124
MS.gene61186.t1 MTR_3g102600 69.811 53 16 0 191 243 82 134 7.35e-19 83.6
MS.gene61186.t1 MTR_6g453220 79.775 89 18 0 208 296 379 467 4.81e-33 132
MS.gene61186.t1 MTR_5g055260 34.413 247 107 7 3 249 7 198 3.39e-31 121
MS.gene61186.t1 MTR_8g032710 29.688 256 156 5 9 244 20 271 1.47e-27 115
MS.gene61186.t1 MTR_4g064730 47.788 113 53 2 157 263 94 206 1.58e-23 101
MS.gene61186.t1 MTR_3g092780 34.532 139 86 2 10 144 56 193 1.13e-22 102
MS.gene61186.t1 MTR_3g092780 34.532 139 86 2 10 144 56 193 1.40e-22 102
MS.gene61186.t1 MTR_6g016850 37.008 127 77 2 4 128 7 132 5.57e-22 93.2
MS.gene61186.t1 MTR_3g092780 37.008 127 75 2 10 132 56 181 7.33e-22 99.8
MS.gene61186.t1 MTR_3g092780 37.008 127 75 2 10 132 56 181 9.57e-22 99.4
MS.gene61186.t1 MTR_4g023980 32.934 167 85 4 52 218 35 174 2.39e-21 91.7
MS.gene61186.t1 MTR_7g118260 32.258 186 111 5 3 179 5 184 3.83e-21 97.1
MS.gene61186.t1 MTR_8g024260 33.929 168 97 3 12 165 38 205 1.21e-20 95.9
MS.gene61186.t1 MTR_7g118260 35.766 137 77 3 3 131 5 138 6.14e-20 93.2
MS.gene61186.t1 MTR_7g089010 65.000 60 21 0 191 250 90 149 1.18e-19 89.7
MS.gene61186.t1 MTR_1g067110 36.885 122 74 2 10 128 85 206 1.70e-19 92.4
MS.gene61186.t1 MTR_1g067110 36.885 122 74 2 10 128 85 206 1.75e-19 92.4
MS.gene61186.t1 MTR_4g061360 36.220 127 77 2 6 128 84 210 7.86e-19 90.5
MS.gene61186.t1 MTR_3g037390 33.871 124 79 1 10 130 24 147 1.49e-18 89.0
MS.gene61186.t1 MTR_8g093040 35.484 124 80 0 5 128 13 136 2.27e-18 85.5
MS.gene61186.t1 MTR_4g108880 32.258 124 81 1 10 130 33 156 4.27e-17 84.7
MS.gene61186.t1 MTR_2g090675 40.351 114 57 2 189 302 158 260 6.13e-17 83.2
MS.gene61186.t1 MTR_5g014040 54.545 66 30 0 185 250 304 369 7.44e-17 83.6
MS.gene61186.t1 MTR_5g014040 34.677 124 77 2 6 128 14 134 1.35e-11 67.4
MS.gene61186.t1 MTR_4g078810 53.030 66 31 0 189 254 155 220 4.76e-16 80.5
MS.gene61186.t1 MTR_4g098870 55.738 61 27 0 190 250 308 368 2.95e-15 79.0
MS.gene61186.t1 MTR_4g098870 55.738 61 27 0 190 250 308 368 2.98e-15 79.0
MS.gene61186.t1 MTR_4g098870 55.738 61 27 0 190 250 328 388 3.15e-15 78.6
MS.gene61186.t1 MTR_4g098870 55.738 61 27 0 190 250 328 388 3.32e-15 78.6
MS.gene61186.t1 MTR_4g098870 55.738 61 27 0 190 250 347 407 3.56e-15 78.6
MS.gene61186.t1 MTR_5g014040 50.704 71 30 1 185 250 264 334 5.97e-15 77.8
MS.gene61186.t1 MTR_5g014040 50.704 71 30 1 185 250 304 374 7.23e-15 77.4
MS.gene61186.t1 MTR_5g014040 34.677 124 77 2 6 128 14 134 1.60e-11 67.0
MS.gene61186.t1 MTR_4g086835 39.091 110 46 2 187 296 269 357 1.28e-14 76.3
MS.gene61186.t1 MTR_1g093080 50.000 68 33 1 185 251 204 271 5.26e-14 73.9
MS.gene61186.t1 MTR_7g115530 50.000 76 37 1 190 264 216 291 7.06e-14 72.8
MS.gene61186.t1 MTR_7g115530 50.000 76 37 1 190 264 216 291 1.42e-13 72.0
MS.gene61186.t1 MTR_5g017980 51.613 62 30 0 189 250 189 250 1.83e-13 71.6
MS.gene61186.t1 MTR_5g017980 51.613 62 30 0 189 250 190 251 2.01e-13 71.6
MS.gene61186.t1 MTR_4g113140 48.684 76 37 2 177 251 221 295 2.12e-13 72.4
MS.gene61186.t1 MTR_7g115530 50.000 76 37 1 190 264 216 291 2.71e-13 72.0
MS.gene61186.t1 MTR_1g080330 60.345 58 22 1 188 244 171 228 3.25e-13 70.5
MS.gene61186.t1 MTR_7g115530 64.286 56 19 1 190 244 216 271 3.44e-13 71.2
MS.gene61186.t1 MTR_4g086835 38.739 111 46 3 187 296 269 358 4.10e-13 71.6
MS.gene61186.t1 MTR_1g080330 52.941 68 31 1 188 254 171 238 4.47e-13 71.2
MS.gene61186.t1 MTR_2g023580 45.238 84 45 1 191 273 54 137 1.60e-12 67.8
MS.gene61186.t1 MTR_5g017980 50.794 63 30 1 189 250 190 252 1.80e-12 68.9
MS.gene61186.t1 MTR_7g098250 51.471 68 32 1 188 254 258 325 1.99e-12 69.7
MS.gene61186.t1 MTR_6g032990 43.878 98 46 4 192 285 42 134 2.37e-12 68.9
MS.gene61186.t1 MTR_5g054300 49.231 65 32 1 186 249 192 256 2.91e-12 68.6
MS.gene61186.t1 MTR_2g086450 56.364 55 23 1 192 245 45 99 3.60e-12 68.6
MS.gene61186.t1 MTR_6g088950 27.485 171 118 2 8 177 5 170 4.36e-12 65.9
MS.gene61186.t1 MTR_2g027800 57.627 59 24 1 188 245 35 93 5.53e-12 67.0
MS.gene61186.t1 MTR_2g027800 57.627 59 24 1 188 245 35 93 5.54e-12 67.0
MS.gene61186.t1 MTR_1g090670 55.932 59 25 1 188 245 40 98 7.49e-12 66.6
MS.gene61186.t1 MTR_7g115530 62.963 54 19 1 190 242 216 269 9.65e-12 65.9
MS.gene61186.t1 MTR_5g027440 38.235 102 55 3 188 281 21 122 1.09e-11 65.9
MS.gene61186.t1 MTR_7g088070 45.783 83 41 3 192 271 50 131 1.47e-11 65.5
MS.gene61186.t1 MTR_1g053830 54.717 53 23 1 194 245 20 72 1.63e-11 61.2
MS.gene61186.t1 MTR_5g041350 52.727 55 25 1 192 245 15 69 1.94e-11 65.9
MS.gene61186.t1 MTR_8g038620 28.986 138 78 3 12 129 11 148 3.78e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61186.t1 AT2G25180 58.333 336 122 9 4 333 11 334 5.60e-112 344
MS.gene61186.t1 AT4G31920 49.257 404 147 11 4 391 11 372 5.93e-104 322
MS.gene61186.t1 AT3G16857 50.000 306 119 5 4 286 31 325 5.56e-92 294
MS.gene61186.t1 AT3G16857 50.000 306 119 5 4 286 31 325 1.16e-91 294
MS.gene61186.t1 AT5G58080 47.258 383 156 11 4 368 12 366 4.47e-87 280
MS.gene61186.t1 AT2G01760 43.056 360 177 9 2 338 3 357 5.20e-78 249
MS.gene61186.t1 AT1G67710 54.980 251 100 4 7 250 8 252 1.01e-77 253
MS.gene61186.t1 AT3G16857 49.434 265 100 5 45 286 2 255 1.63e-74 247
MS.gene61186.t1 AT2G01760 39.948 388 177 10 2 338 3 385 5.89e-72 234
MS.gene61186.t1 AT1G67710 53.368 193 77 4 65 250 1 187 1.83e-51 181
MS.gene61186.t1 AT5G49240 38.430 242 146 2 1 241 33 272 6.48e-50 173
MS.gene61186.t1 AT2G01760 39.731 297 151 9 65 338 1 292 3.67e-49 172
MS.gene61186.t1 AT3G62670 37.795 254 139 7 11 258 42 282 1.39e-43 159
MS.gene61186.t1 AT1G67710 47.977 173 77 4 85 250 12 178 5.28e-37 142
MS.gene61186.t1 AT1G49190 31.387 274 170 5 5 268 29 294 3.39e-35 136
MS.gene61186.t1 AT5G07210 31.900 279 144 7 8 251 14 281 3.09e-34 136
MS.gene61186.t1 AT5G07210 27.681 401 217 14 8 354 14 395 9.48e-32 129
MS.gene61186.t1 AT2G27070 31.338 284 140 7 8 250 14 283 9.62e-32 129
MS.gene61186.t1 AT2G46790 39.837 123 69 2 10 128 37 158 4.37e-24 105
MS.gene61186.t1 AT2G46790 39.837 123 69 2 10 128 37 158 5.05e-24 105
MS.gene61186.t1 AT5G59570 49.462 93 47 0 171 263 120 212 6.82e-23 99.4
MS.gene61186.t1 AT5G59570 49.462 93 47 0 171 263 120 212 6.82e-23 99.4
MS.gene61186.t1 AT1G49190 37.600 125 78 0 5 129 29 153 1.59e-22 101
MS.gene61186.t1 AT5G24470 36.719 128 76 2 8 131 48 174 1.02e-21 99.0
MS.gene61186.t1 AT3G46640 37.107 159 86 4 105 250 45 202 3.96e-21 94.7
MS.gene61186.t1 AT3G46640 37.107 159 86 4 105 250 45 202 3.96e-21 94.7
MS.gene61186.t1 AT2G40970 45.370 108 55 1 170 273 79 186 4.06e-21 93.2
MS.gene61186.t1 AT3G46640 37.107 159 86 4 105 250 45 202 6.21e-21 94.0
MS.gene61186.t1 AT5G02810 38.525 122 72 1 10 128 78 199 1.43e-20 95.9
MS.gene61186.t1 AT5G60100 37.795 127 75 2 6 128 59 185 3.19e-20 93.2
MS.gene61186.t1 AT5G60100 37.795 127 75 2 6 128 59 185 3.19e-20 93.2
MS.gene61186.t1 AT5G60100 37.795 127 75 2 6 128 59 185 3.19e-20 93.2
MS.gene61186.t1 AT5G60100 37.795 127 75 2 6 128 59 185 4.78e-20 93.6
MS.gene61186.t1 AT5G60100 37.795 127 75 2 6 128 59 185 4.78e-20 93.6
MS.gene61186.t1 AT5G60100 37.795 127 75 2 6 128 59 185 4.78e-20 93.6
MS.gene61186.t1 AT5G05090 51.899 79 38 0 172 250 61 139 5.07e-20 90.1
MS.gene61186.t1 AT3G10760 65.000 60 21 0 191 250 104 163 5.12e-20 91.7
MS.gene61186.t1 AT5G60100 37.795 127 75 2 6 128 59 185 9.87e-20 92.4
MS.gene61186.t1 AT5G44190 59.155 71 29 0 184 254 139 209 1.27e-19 90.9
MS.gene61186.t1 AT5G44190 59.155 71 29 0 184 254 139 209 1.45e-19 90.9
MS.gene61186.t1 AT5G61380 33.871 124 79 1 10 130 19 142 6.69e-19 90.5
MS.gene61186.t1 AT2G20570 39.370 127 64 2 141 254 89 215 2.19e-17 84.7
MS.gene61186.t1 AT2G20570 63.793 58 21 0 197 254 174 231 8.10e-16 80.1
MS.gene61186.t1 AT4G18020 54.286 70 30 1 186 255 292 359 9.36e-15 77.0
MS.gene61186.t1 AT4G18020 54.286 70 30 1 186 255 292 359 9.36e-15 77.0
MS.gene61186.t1 AT4G18020 54.286 70 30 1 186 255 292 359 9.36e-15 77.0
MS.gene61186.t1 AT4G18020 54.286 70 30 1 186 255 292 359 9.36e-15 77.0
MS.gene61186.t1 AT4G18020 54.286 70 30 1 186 255 292 359 9.36e-15 77.0
MS.gene61186.t1 AT4G18020 54.286 70 30 1 186 255 292 359 9.36e-15 77.0
MS.gene61186.t1 AT4G18020 54.286 70 30 1 186 255 292 359 1.23e-14 76.6
MS.gene61186.t1 AT4G18020 54.286 70 30 1 186 255 292 359 1.23e-14 76.6
MS.gene61186.t1 AT4G18020 54.286 70 30 1 186 255 292 359 1.23e-14 76.6
MS.gene61186.t1 AT4G18020 54.286 70 30 1 186 255 292 359 1.23e-14 76.6
MS.gene61186.t1 AT4G18020 54.286 70 30 1 186 255 292 359 1.23e-14 76.6
MS.gene61186.t1 AT2G03500 54.839 62 27 1 191 251 232 293 4.10e-13 71.6
MS.gene61186.t1 AT5G45580 53.731 67 28 2 182 245 11 77 1.80e-12 68.2
MS.gene61186.t1 AT3G57040 28.395 162 94 2 12 151 11 172 2.51e-12 67.0
MS.gene61186.t1 AT3G57040 28.395 162 94 2 12 151 11 172 2.51e-12 67.0
MS.gene61186.t1 AT3G04030 56.364 55 23 1 192 245 45 99 2.77e-12 68.9
MS.gene61186.t1 AT5G45580 55.932 59 25 1 188 245 3 61 2.95e-12 67.4
MS.gene61186.t1 AT3G04030 56.364 55 23 1 192 245 45 99 3.20e-12 68.6
MS.gene61186.t1 AT5G18240 58.182 55 22 1 192 245 45 99 5.57e-12 67.8
MS.gene61186.t1 AT5G18240 58.182 55 22 1 192 245 45 99 5.57e-12 67.8
MS.gene61186.t1 AT5G18240 58.182 55 22 1 192 245 45 99 6.14e-12 67.8
MS.gene61186.t1 AT5G18240 58.182 55 22 1 192 245 45 99 6.14e-12 67.8
MS.gene61186.t1 AT5G18240 58.182 55 22 1 192 245 45 99 6.26e-12 67.8
MS.gene61186.t1 AT3G56380 31.298 131 76 2 10 126 20 150 1.02e-11 63.5
MS.gene61186.t1 AT2G40670 32.331 133 74 2 10 126 29 161 2.28e-11 62.8
MS.gene61186.t1 AT1G25550 51.667 60 28 1 191 249 208 267 2.29e-11 65.9
MS.gene61186.t1 AT3G56380 31.538 130 76 2 10 126 20 149 3.22e-11 62.0
MS.gene61186.t1 AT1G49560 47.222 72 37 1 187 257 187 258 4.80e-11 64.7
MS.gene61186.t1 AT1G69580 54.545 55 24 1 192 245 34 88 5.87e-11 64.3
MS.gene61186.t1 AT3G24120 41.111 90 42 2 188 266 37 126 6.12e-11 63.9
MS.gene61186.t1 AT1G69580 54.545 55 24 1 192 245 34 88 6.18e-11 64.3
MS.gene61186.t1 AT3G24120 41.111 90 42 2 188 266 37 126 6.24e-11 63.9
MS.gene61186.t1 AT4G37180 49.180 61 30 1 190 249 208 268 6.32e-11 64.3
MS.gene61186.t1 AT1G68670 42.857 77 43 1 174 249 197 273 6.53e-11 64.3
MS.gene61186.t1 AT4G37180 49.180 61 30 1 190 249 215 275 6.98e-11 64.3
MS.gene61186.t1 AT2G40670 32.576 132 74 2 10 126 29 160 7.99e-11 61.2

Find 107 sgRNAs with CRISPR-Local

Find 157 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAACATGTCTCAAGATTT+TGG 0.179210 1.1:-8025039 MS.gene61186:CDS
TTGTTTGTGAAACTGAAATT+TGG 0.235409 1.1:+8022871 None:intergenic
GGAGGTTATTGGTCATGTTT+TGG 0.244923 1.1:+8022893 None:intergenic
ACTGAAATTTGGGAGGTTAT+TGG 0.250594 1.1:+8022882 None:intergenic
ATTCCTTTCATCACCATCTT+TGG 0.256348 1.1:+8024197 None:intergenic
ATCTAAAAGGATTGTTATAA+TGG 0.273251 1.1:+8023118 None:intergenic
CATTTGGATTGCCGCGAGTT+AGG 0.293700 1.1:+8022947 None:intergenic
ACAGAAGGTGCAATGGTATT+TGG 0.304024 1.1:-8022750 MS.gene61186:CDS
TGTACCTCTTTCAGTCTAAC+AGG 0.317233 1.1:+8024143 None:intergenic
CCATTTCCACTATCAGAATT+AGG 0.318838 1.1:+8024059 None:intergenic
ATGAATGATCAGTTTCCTAT+TGG 0.330551 1.1:-8025089 MS.gene61186:CDS
CCTAATTCTGATAGTGGAAA+TGG 0.330629 1.1:-8024059 MS.gene61186:CDS
ATACCTCTTTGAACATCATT+TGG 0.333499 1.1:+8022931 None:intergenic
CCAGATGGAAAGGATCTAAA+AGG 0.348535 1.1:+8023105 None:intergenic
TCCAACTCCACTTCTTAAAT+AGG 0.361147 1.1:+8023182 None:intergenic
GGAAGATAAGAGTTTGTTCC+AGG 0.362766 1.1:+8022706 None:intergenic
ATAGGCTCTTCTATGATTCC+TGG 0.370372 1.1:-8022574 MS.gene61186:CDS
GGAAACTTGGACTACAATTA+TGG 0.374368 1.1:-8022529 MS.gene61186:CDS
TGTTTGTGAAACTGAAATTT+GGG 0.375065 1.1:+8022872 None:intergenic
AACAATCCCTTGATGTTAGA+AGG 0.383955 1.1:-8022853 MS.gene61186:CDS
TTTAAGCTCCTTGAGCTTGT+TGG 0.387237 1.1:-8024352 MS.gene61186:CDS
ACATGGTGCGTGTGATTATC+TGG 0.387305 1.1:-8024171 MS.gene61186:CDS
ATTTGGATTGCCGCGAGTTA+GGG 0.388130 1.1:+8022948 None:intergenic
TGAAAGAGGTACAGATCATT+TGG 0.404224 1.1:-8024133 MS.gene61186:CDS
ATGCCTCATGTGTCATTTCA+AGG 0.407109 1.1:-8022658 MS.gene61186:CDS
AATGTGATCGGCAGTTCAAT+AGG 0.412930 1.1:-8022592 MS.gene61186:CDS
TATGAACATTGCTGATTACT+AGG 0.423694 1.1:+8024392 None:intergenic
TCATGTGTCATTTCAAGGTT+GGG 0.431069 1.1:-8022653 MS.gene61186:CDS
TACCATGGTATTGACACCTT+TGG 0.431203 1.1:+8025006 None:intergenic
CCATTCATATTCACATTAGT+AGG 0.431732 1.1:+8023054 None:intergenic
GGACATTTGCATACATTGAA+TGG 0.439183 1.1:-8023159 MS.gene61186:CDS
GTTGCTGCGGTTAATCAATT+AGG 0.445001 1.1:-8023861 MS.gene61186:CDS
CCTACTAATGTGAATATGAA+TGG 0.451724 1.1:-8023054 MS.gene61186:CDS
TCATTTGGCAGCATGTAATC+AGG 0.452747 1.1:-8024118 MS.gene61186:CDS
GACGCGCCTAATTCTGATAG+TGG 0.455329 1.1:-8024065 MS.gene61186:CDS
AGAAGAAGCCTCGAACTGTT+TGG 0.455763 1.1:-8023908 MS.gene61186:CDS
CTGACTCGGCTGAAGAGTTC+CGG 0.455864 1.1:+8023020 None:intergenic
TGAGCTTGTTGGACTTGAGA+TGG 0.457732 1.1:-8024341 MS.gene61186:CDS
GCAAGAACTCGCATTCCAAT+AGG 0.458411 1.1:+8025074 None:intergenic
AGAATTTCCTTCTAACATCA+AGG 0.459500 1.1:+8022846 None:intergenic
GGACTACAATTATGGTGATT+CGG 0.460683 1.1:-8022521 MS.gene61186:CDS
ATCAGTTCAAGAATCTTCTT+CGG 0.461313 1.1:+8023580 None:intergenic
CTCATGTGTCATTTCAAGGT+TGG 0.464023 1.1:-8022654 MS.gene61186:CDS
AGCTTAAATCCATCCATGTC+TGG 0.471845 1.1:+8024367 None:intergenic
GCATGGTTAAAAGATTCTCT+TGG 0.472134 1.1:+8022685 None:intergenic
GGGAAACATTCGGCTGGGAC+AGG 0.477461 1.1:-8024038 MS.gene61186:CDS
CTAATTCTGATAGTGGAAAT+GGG 0.482228 1.1:-8024058 MS.gene61186:CDS
ATGAAAAGCCATCTAGAAAA+CGG 0.489677 1.1:-8024001 MS.gene61186:CDS
GATACATCCTATTTAAGAAG+TGG 0.493596 1.1:-8023189 MS.gene61186:CDS
TCCTATTTAAGAAGTGGAGT+TGG 0.497128 1.1:-8023183 MS.gene61186:CDS
GATAATAACAATAATCATGA+TGG 0.497207 1.1:-8022631 MS.gene61186:CDS
CACTGCTCAAAACGCGATAA+CGG 0.499559 1.1:-8024452 MS.gene61186:CDS
TTTAGATCCTTTCCATCTGG+TGG 0.500957 1.1:-8023102 MS.gene61186:CDS
TCCCTTTACTTGAAAACAGA+AGG 0.502275 1.1:-8022765 MS.gene61186:CDS
GGAAGACAAACAAGATCATA+TGG 0.510045 1.1:-8023235 MS.gene61186:CDS
TAGTGGAAATGGGAAACATT+CGG 0.510168 1.1:-8024048 MS.gene61186:CDS
AGCACAATGCAACAACTACC+TGG 0.515145 1.1:-8022724 MS.gene61186:CDS
GGAAATGGGAAACATTCGGC+TGG 0.517134 1.1:-8024044 MS.gene61186:CDS
TGCCGATCACATTAGAAGAA+TGG 0.518061 1.1:+8022602 None:intergenic
TACCATTCTTCTAATGTGAT+CGG 0.518616 1.1:-8022604 MS.gene61186:CDS
GAAGGTGGCCAGCCATCTCC+AGG 0.523004 1.1:-8023533 MS.gene61186:intron
TTGCATAACTTACTTATGAC+AGG 0.526242 1.1:+8024313 None:intergenic
TATTTAAGAAGTGGAGTTGG+AGG 0.527033 1.1:-8023180 MS.gene61186:CDS
TGCCGCGAGTTAGGGCCGAT+TGG 0.528037 1.1:+8022956 None:intergenic
ATGAATGGATTGCATTCTGC+CGG 0.538303 1.1:-8023039 MS.gene61186:CDS
GAAACCTGTTAGACTGAAAG+AGG 0.539886 1.1:-8024147 MS.gene61186:CDS
TGTCGAGCAAGAAGGAAACT+TGG 0.540152 1.1:-8022542 MS.gene61186:CDS
TATTGGAATGCGAGTTCTTG+CGG 0.540178 1.1:-8025072 MS.gene61186:CDS
TCAGCGGACCAAACAGTTCG+AGG 0.550196 1.1:+8023900 None:intergenic
AAGGATAAGAATGAAGATGA+TGG 0.554575 1.1:-8023978 MS.gene61186:CDS
CAATGTTCATATGCCAGACA+TGG 0.556391 1.1:-8024380 MS.gene61186:CDS
CTTGAAAACAGAAGGTGCAA+TGG 0.560167 1.1:-8022757 MS.gene61186:CDS
GAATTTCCTTCTAACATCAA+GGG 0.562420 1.1:+8022847 None:intergenic
ATGGTGATTCGGTACAATGA+AGG 0.563231 1.1:-8022510 None:intergenic
TAAGAATGAAGATGATGGTG+AGG 0.566326 1.1:-8023973 MS.gene61186:CDS
TGATCAGCTAAAGTTCCAAT+CGG 0.568120 1.1:-8022971 MS.gene61186:CDS
TGTATCTGAACCACTAGCTA+TGG 0.569493 1.1:+8023206 None:intergenic
ATGAATGTTGTCGAGCAAGA+AGG 0.574186 1.1:-8022550 MS.gene61186:CDS
TGATGGTGAGGAAGAAAGTG+AGG 0.580573 1.1:-8023961 MS.gene61186:CDS
CATAACACCACCAGATGGAA+AGG 0.581151 1.1:+8023095 None:intergenic
GTTCATATGCCAGACATGGA+TGG 0.584384 1.1:-8024376 MS.gene61186:CDS
TGCTCGACAACATTCATACC+AGG 0.593541 1.1:+8022556 None:intergenic
TTTAAATTATGTGTCTGACT+CGG 0.594323 1.1:+8023006 None:intergenic
TCTCAAGTCCAACAAGCTCA+AGG 0.597253 1.1:+8024344 None:intergenic
AATTCTCAAGACAAACAAGT+AGG 0.598098 1.1:-8022829 MS.gene61186:CDS
CAAGACAAACAAGTAGGTGA+AGG 0.598346 1.1:-8022823 MS.gene61186:CDS
TGAAAATCTGACAAGGGAGA+AGG 0.601495 1.1:-8023551 MS.gene61186:CDS
AATCCAAATGATGTTCAAAG+AGG 0.602398 1.1:-8022934 MS.gene61186:CDS
TTCCAATCGGCCCTAACTCG+CGG 0.602702 1.1:-8022958 MS.gene61186:CDS
AAATCTGACAAGGGAGAAGG+TGG 0.609003 1.1:-8023548 MS.gene61186:CDS
ACACCGCAAGTTTGTTGCTG+CGG 0.610830 1.1:-8023874 MS.gene61186:CDS
TGCGAATGATGATCCAAAGA+TGG 0.615837 1.1:-8024210 MS.gene61186:CDS
CTACTCATAACACCACCAGA+TGG 0.616853 1.1:+8023090 None:intergenic
GAAATGGGAAACATTCGGCT+GGG 0.620073 1.1:-8024043 MS.gene61186:CDS
AAAGCCATCTAGAAAACGGA+AGG 0.622229 1.1:-8023997 MS.gene61186:CDS
ATAACTTACTTATGACAGGT+AGG 0.629417 1.1:+8024317 None:intergenic
GATCCAAAGATGGTGATGAA+AGG 0.637771 1.1:-8024200 MS.gene61186:CDS
ACACATGAGGCATAGCAGCA+TGG 0.642777 1.1:+8022668 None:intergenic
CTCCAAAGGTGTCAATACCA+TGG 0.650196 1.1:-8025008 MS.gene61186:intron
ATGGCAGCAGCCATAGCTAG+TGG 0.659987 1.1:-8023216 MS.gene61186:CDS
TAACCGCAGCAACAAACTTG+CGG 0.661176 1.1:+8023871 None:intergenic
AAACTTGCGGTGTAAATCAG+CGG 0.665866 1.1:+8023884 None:intergenic
CAACCTTGAAATGACACATG+AGG 0.667024 1.1:+8022655 None:intergenic
TTGTGAAACTGAAATTTGGG+AGG 0.670570 1.1:+8022875 None:intergenic
TGAATGTTGAAAATCTGACA+AGG 0.702505 1.1:-8023558 MS.gene61186:CDS
GAATGTTGAAAATCTGACAA+GGG 0.715396 1.1:-8023557 MS.gene61186:CDS
GTGATGAAAGGAATTGAACA+TGG 0.742148 1.1:-8024188 MS.gene61186:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGATATTTATTTTAGTTA+TGG - chr1.1:8023248-8023267 MS.gene61186:CDS 10.0%
!!! AATTTTATTTGATATTGTTT+AGG - chr1.1:8023026-8023045 MS.gene61186:CDS 10.0%
!!! ATTATTATTTTCAATAAAGT+TGG - chr1.1:8022924-8022943 MS.gene61186:CDS 10.0%
!!! TATTTTGAAATATTAAAGAT+GGG - chr1.1:8022801-8022820 MS.gene61186:CDS 10.0%
!!! TTATTTTGAAATATTAAAGA+TGG - chr1.1:8022800-8022819 MS.gene61186:CDS 10.0%
!! AAAAAACAAGATTAAAATCA+AGG + chr1.1:8022828-8022847 None:intergenic 15.0%
!! AAGTATATATACAAAAAAGA+AGG + chr1.1:8022522-8022541 None:intergenic 15.0%
!! TAATTGAATTAAACAACATA+TGG - chr1.1:8024350-8024369 MS.gene61186:CDS 15.0%
!! TATCAATAATATAAGATTGA+AGG + chr1.1:8023460-8023479 None:intergenic 15.0%
!!! CAAAAAAATAGTGATTTTTA+AGG + chr1.1:8022621-8022640 None:intergenic 15.0%
!!! TTTTTAGTAAAGAATATTTG+AGG + chr1.1:8024064-8024083 None:intergenic 15.0%
!! AAATCTAATGATATATAGCT+AGG - chr1.1:8022856-8022875 MS.gene61186:CDS 20.0%
!! AATCTAATGATATATAGCTA+GGG - chr1.1:8022857-8022876 MS.gene61186:CDS 20.0%
!! ATCTAAAAGGATTGTTATAA+TGG + chr1.1:8024630-8024649 None:intergenic 20.0%
!! GATAATAACAATAATCATGA+TGG - chr1.1:8025114-8025133 MS.gene61186:intron 20.0%
!!! ATTTTGATAAACTGGAAAAA+AGG + chr1.1:8023998-8024017 None:intergenic 20.0%
! CTGCAGAAAAATTAAAAAAC+AGG + chr1.1:8024455-8024474 None:intergenic 25.0%
! GAAGTCTTCAAATAATACAT+TGG + chr1.1:8024042-8024061 None:intergenic 25.0%
! TCTAAAAAGAATTAGTTGTG+CGG - chr1.1:8024489-8024508 MS.gene61186:intron 25.0%
! TCTAGCATATGCATAAATAT+AGG + chr1.1:8022905-8022924 None:intergenic 25.0%
! TGTTTGTGAAACTGAAATTT+GGG + chr1.1:8024876-8024895 None:intergenic 25.0%
! TTGTTTGTGAAACTGAAATT+TGG + chr1.1:8024877-8024896 None:intergenic 25.0%
! TTTAAATTATGTGTCTGACT+CGG + chr1.1:8024742-8024761 None:intergenic 25.0%
!! TAATTGATTTCTACAAGCAT+TGG + chr1.1:8022995-8023014 None:intergenic 25.0%
!!! GCACAAATATTTTGATAAAC+TGG + chr1.1:8024006-8024025 None:intergenic 25.0%
AAGGATAAGAATGAAGATGA+TGG - chr1.1:8023767-8023786 MS.gene61186:intron 30.0%
AATCCAAATGATGTTCAAAG+AGG - chr1.1:8024811-8024830 MS.gene61186:intron 30.0%
AATTCTCAAGACAAACAAGT+AGG - chr1.1:8024916-8024935 MS.gene61186:intron 30.0%
ACATAAGATCACCAAAGATT+AGG + chr1.1:8023154-8023173 None:intergenic 30.0%
AGAATTTCCTTCTAACATCA+AGG + chr1.1:8024902-8024921 None:intergenic 30.0%
ATAACTTACTTATGACAGGT+AGG + chr1.1:8023431-8023450 None:intergenic 30.0%
ATACCTCTTTGAACATCATT+TGG + chr1.1:8024817-8024836 None:intergenic 30.0%
ATCAGTTCAAGAATCTTCTT+CGG + chr1.1:8024168-8024187 None:intergenic 30.0%
ATGAAAAGCCATCTAGAAAA+CGG - chr1.1:8023744-8023763 MS.gene61186:intron 30.0%
ATGAATGATCAGTTTCCTAT+TGG - chr1.1:8022656-8022675 MS.gene61186:CDS 30.0%
CCATTCATATTCACATTAGT+AGG + chr1.1:8024694-8024713 None:intergenic 30.0%
CCTACTAATGTGAATATGAA+TGG - chr1.1:8024691-8024710 MS.gene61186:intron 30.0%
GAATGTTGAAAATCTGACAA+GGG - chr1.1:8024188-8024207 MS.gene61186:CDS 30.0%
GAATTTCCTTCTAACATCAA+GGG + chr1.1:8024901-8024920 None:intergenic 30.0%
GATACATCCTATTTAAGAAG+TGG - chr1.1:8024556-8024575 MS.gene61186:intron 30.0%
TACCATTCTTCTAATGTGAT+CGG - chr1.1:8025141-8025160 MS.gene61186:intron 30.0%
TGAATGTTGAAAATCTGACA+AGG - chr1.1:8024187-8024206 MS.gene61186:CDS 30.0%
TGAGAAAAACACTTCAGAAT+CGG + chr1.1:8024117-8024136 None:intergenic 30.0%
TTGCATAACTTACTTATGAC+AGG + chr1.1:8023435-8023454 None:intergenic 30.0%
! ATGATATATAGCTAGGGTTT+TGG - chr1.1:8022863-8022882 MS.gene61186:CDS 30.0%
! TAGAACATGTCTCAAGATTT+TGG - chr1.1:8022706-8022725 MS.gene61186:CDS 30.0%
! TATGAACATTGCTGATTACT+AGG + chr1.1:8023356-8023375 None:intergenic 30.0%
! TTGTTGCTTCTTTCAAAGAT+TGG - chr1.1:8023079-8023098 MS.gene61186:CDS 30.0%
!! AAGAGATAAGAAAAAGTACC+TGG + chr1.1:8024233-8024252 None:intergenic 30.0%
!! CTAATTCTGATAGTGGAAAT+GGG - chr1.1:8023687-8023706 MS.gene61186:intron 30.0%
!! TTATTGGTCATGTTTTGGAT+AGG + chr1.1:8024850-8024869 None:intergenic 30.0%
!!! ACCTTCTGTTTTCAAGTAAA+GGG + chr1.1:8024984-8025003 None:intergenic 30.0%
AACAATCCCTTGATGTTAGA+AGG - chr1.1:8024892-8024911 MS.gene61186:intron 35.0%
AATCGGAAAAATTCGTAGCA+TGG + chr1.1:8024100-8024119 None:intergenic 35.0%
ACTGAAATTTGGGAGGTTAT+TGG + chr1.1:8024866-8024885 None:intergenic 35.0%
ATCTTTGTGTGCCTAATCTT+TGG - chr1.1:8023140-8023159 MS.gene61186:CDS 35.0%
ATTCCTTTCATCACCATCTT+TGG + chr1.1:8023551-8023570 None:intergenic 35.0%
CCATTTCCACTATCAGAATT+AGG + chr1.1:8023689-8023708 None:intergenic 35.0%
GCATGGTTAAAAGATTCTCT+TGG + chr1.1:8025063-8025082 None:intergenic 35.0%
GGAAACTTGGACTACAATTA+TGG - chr1.1:8025216-8025235 MS.gene61186:intron 35.0%
GGAAGACAAACAAGATCATA+TGG - chr1.1:8024510-8024529 MS.gene61186:intron 35.0%
GGACATTTGCATACATTGAA+TGG - chr1.1:8024586-8024605 MS.gene61186:intron 35.0%
GGACTACAATTATGGTGATT+CGG - chr1.1:8025224-8025243 MS.gene61186:intron 35.0%
GTGATGAAAGGAATTGAACA+TGG - chr1.1:8023557-8023576 MS.gene61186:CDS 35.0%
TAGTGGAAATGGGAAACATT+CGG - chr1.1:8023697-8023716 MS.gene61186:intron 35.0%
TATTTAAGAAGTGGAGTTGG+AGG - chr1.1:8024565-8024584 MS.gene61186:intron 35.0%
TCCAACTCCACTTCTTAAAT+AGG + chr1.1:8024566-8024585 None:intergenic 35.0%
TCCCTTTACTTGAAAACAGA+AGG - chr1.1:8024980-8024999 MS.gene61186:intron 35.0%
TCCTATTTAAGAAGTGGAGT+TGG - chr1.1:8024562-8024581 MS.gene61186:intron 35.0%
TGATAGTTGTTATCTTGCAG+AGG - chr1.1:8024137-8024156 MS.gene61186:CDS 35.0%
TGATCAGCTAAAGTTCCAAT+CGG - chr1.1:8024774-8024793 MS.gene61186:intron 35.0%
TTGTGAAACTGAAATTTGGG+AGG + chr1.1:8024873-8024892 None:intergenic 35.0%
! TAAGAATGAAGATGATGGTG+AGG - chr1.1:8023772-8023791 MS.gene61186:intron 35.0%
! TGAAAGAGGTACAGATCATT+TGG - chr1.1:8023612-8023631 MS.gene61186:intron 35.0%
! TTATCCTTCCGTTTTCTAGA+TGG + chr1.1:8023755-8023774 None:intergenic 35.0%
! TTTTGCGCATTGAAGAAAGA+GGG + chr1.1:8023927-8023946 None:intergenic 35.0%
! TTTTTGCGCATTGAAGAAAG+AGG + chr1.1:8023928-8023947 None:intergenic 35.0%
!! CCTAATTCTGATAGTGGAAA+TGG - chr1.1:8023686-8023705 MS.gene61186:intron 35.0%
!! GGTGATCTTATGTTGTTTCT+TGG - chr1.1:8023161-8023180 MS.gene61186:CDS 35.0%
!! TAAGAAAAAGTACCTGGAGA+TGG + chr1.1:8024227-8024246 None:intergenic 35.0%
!! TCATGTGTCATTTCAAGGTT+GGG - chr1.1:8025092-8025111 MS.gene61186:CDS 35.0%
!! TTTTGGAGAAACTTCTCCAA+AGG - chr1.1:8022723-8022742 MS.gene61186:CDS 35.0%
!!! CACCTTCTGTTTTCAAGTAA+AGG + chr1.1:8024985-8025004 None:intergenic 35.0%
AAACTTGCGGTGTAAATCAG+CGG + chr1.1:8023864-8023883 None:intergenic 40.0%
AAAGCCATCTAGAAAACGGA+AGG - chr1.1:8023748-8023767 MS.gene61186:intron 40.0%
AATGTGATCGGCAGTTCAAT+AGG - chr1.1:8025153-8025172 MS.gene61186:intron 40.0%
AGCTTAAATCCATCCATGTC+TGG + chr1.1:8023381-8023400 None:intergenic 40.0%
ATAGGCTCTTCTATGATTCC+TGG - chr1.1:8025171-8025190 MS.gene61186:intron 40.0%
ATGAATGTTGTCGAGCAAGA+AGG - chr1.1:8025195-8025214 MS.gene61186:intron 40.0%
ATGGTGATTCGTGTTAGTGT+CGG - chr1.1:8024369-8024388 MS.gene61186:CDS 40.0%
ATTAGCAGTGTCCATGTGTA+AGG + chr1.1:8024313-8024332 None:intergenic 40.0%
CAACCTTGAAATGACACATG+AGG + chr1.1:8025093-8025112 None:intergenic 40.0%
CAAGACAAACAAGTAGGTGA+AGG - chr1.1:8024922-8024941 MS.gene61186:intron 40.0%
CAATGTTCATATGCCAGACA+TGG - chr1.1:8023365-8023384 MS.gene61186:intron 40.0%
CCAGATGGAAAGGATCTAAA+AGG + chr1.1:8024643-8024662 None:intergenic 40.0%
CGATGCTTCGTAACTTCTAA+AGG + chr1.1:8024264-8024283 None:intergenic 40.0%
GAAACCTGTTAGACTGAAAG+AGG - chr1.1:8023598-8023617 MS.gene61186:intron 40.0%
GTTGCTGCGGTTAATCAATT+AGG - chr1.1:8023884-8023903 MS.gene61186:CDS 40.0%
TATTGGAATGCGAGTTCTTG+CGG - chr1.1:8022673-8022692 MS.gene61186:CDS 40.0%
TCATTTGGCAGCATGTAATC+AGG - chr1.1:8023627-8023646 MS.gene61186:intron 40.0%
TGAAAATCTGACAAGGGAGA+AGG - chr1.1:8024194-8024213 MS.gene61186:CDS 40.0%
TGCCGATCACATTAGAAGAA+TGG + chr1.1:8025146-8025165 None:intergenic 40.0%
TGCGAATGATGATCCAAAGA+TGG - chr1.1:8023535-8023554 MS.gene61186:CDS 40.0%
TGTACCTCTTTCAGTCTAAC+AGG + chr1.1:8023605-8023624 None:intergenic 40.0%
TGTATCTGAACCACTAGCTA+TGG + chr1.1:8024542-8024561 None:intergenic 40.0%
TTACACATGGACACTGCTAA+TGG - chr1.1:8024312-8024331 MS.gene61186:intron 40.0%
TTTAAGCTCCTTGAGCTTGT+TGG - chr1.1:8023393-8023412 MS.gene61186:intron 40.0%
TTTAGATCCTTTCCATCTGG+TGG - chr1.1:8024643-8024662 MS.gene61186:intron 40.0%
! ACAGAAGGTGCAATGGTATT+TGG - chr1.1:8024995-8025014 MS.gene61186:intron 40.0%
! CCTTTTAGATCCTTTCCATC+TGG - chr1.1:8024640-8024659 MS.gene61186:intron 40.0%
! CTTGAAAACAGAAGGTGCAA+TGG - chr1.1:8024988-8025007 MS.gene61186:intron 40.0%
! GATCCAAAGATGGTGATGAA+AGG - chr1.1:8023545-8023564 MS.gene61186:CDS 40.0%
! GGAAGATAAGAGTTTGTTCC+AGG + chr1.1:8025042-8025061 None:intergenic 40.0%
! GGAGGTTATTGGTCATGTTT+TGG + chr1.1:8024855-8024874 None:intergenic 40.0%
!! ATGAATGGATTGCATTCTGC+CGG - chr1.1:8024706-8024725 MS.gene61186:intron 40.0%
!! ATGCCTCATGTGTCATTTCA+AGG - chr1.1:8025087-8025106 MS.gene61186:CDS 40.0%
!! CTCATGTGTCATTTCAAGGT+TGG - chr1.1:8025091-8025110 MS.gene61186:CDS 40.0%
!! GTTGATGATGAAGCATACCA+TGG + chr1.1:8022757-8022776 None:intergenic 40.0%
!! TACCATGGTATTGACACCTT+TGG + chr1.1:8022742-8022761 None:intergenic 40.0%
!! TGATTTCTACAAGCATTGGC+TGG + chr1.1:8022991-8023010 None:intergenic 40.0%
!!! CTAGGGTTTTGGCTATGTTT+TGG - chr1.1:8022874-8022893 MS.gene61186:CDS 40.0%
AAATCTGACAAGGGAGAAGG+TGG - chr1.1:8024197-8024216 MS.gene61186:CDS 45.0%
ACATGGTGCGTGTGATTATC+TGG - chr1.1:8023574-8023593 MS.gene61186:CDS 45.0%
AGAAGAAGCCTCGAACTGTT+TGG - chr1.1:8023837-8023856 MS.gene61186:intron 45.0%
AGCACAATGCAACAACTACC+TGG - chr1.1:8025021-8025040 MS.gene61186:CDS 45.0%
ATTTGGATTGCCGCGAGTTA+GGG + chr1.1:8024800-8024819 None:intergenic 45.0%
CACTGCTCAAAACGCGATAA+CGG - chr1.1:8023293-8023312 MS.gene61186:intron 45.0%
CATAACACCACCAGATGGAA+AGG + chr1.1:8024653-8024672 None:intergenic 45.0%
CTACTCATAACACCACCAGA+TGG + chr1.1:8024658-8024677 None:intergenic 45.0%
GAAATGGGAAACATTCGGCT+GGG - chr1.1:8023702-8023721 MS.gene61186:intron 45.0%
GCAAGAACTCGCATTCCAAT+AGG + chr1.1:8022674-8022693 None:intergenic 45.0%
GTTCATATGCCAGACATGGA+TGG - chr1.1:8023369-8023388 MS.gene61186:intron 45.0%
TAACCGCAGCAACAAACTTG+CGG + chr1.1:8023877-8023896 None:intergenic 45.0%
TCTCAAGTCCAACAAGCTCA+AGG + chr1.1:8023404-8023423 None:intergenic 45.0%
TGCTCGACAACATTCATACC+AGG + chr1.1:8025192-8025211 None:intergenic 45.0%
TGTCGAGCAAGAAGGAAACT+TGG - chr1.1:8025203-8025222 MS.gene61186:intron 45.0%
! TGATGGTGAGGAAGAAAGTG+AGG - chr1.1:8023784-8023803 MS.gene61186:intron 45.0%
!! AAAAAGTACCTGGAGATGGC+TGG + chr1.1:8024223-8024242 None:intergenic 45.0%
!! CTCCAAAGGTGTCAATACCA+TGG - chr1.1:8022737-8022756 MS.gene61186:CDS 45.0%
!! TGAGCTTGTTGGACTTGAGA+TGG - chr1.1:8023404-8023423 MS.gene61186:intron 45.0%
!! TTTCTACAAGCATTGGCTGG+AGG + chr1.1:8022988-8023007 None:intergenic 45.0%
ACACATGAGGCATAGCAGCA+TGG + chr1.1:8025080-8025099 None:intergenic 50.0%
CATTTGGATTGCCGCGAGTT+AGG + chr1.1:8024801-8024820 None:intergenic 50.0%
CCATGTGTAAGGCTCGTTAC+AGG + chr1.1:8024302-8024321 None:intergenic 50.0%
CCTGTAACGAGCCTTACACA+TGG - chr1.1:8024299-8024318 MS.gene61186:intron 50.0%
GACGCGCCTAATTCTGATAG+TGG - chr1.1:8023680-8023699 MS.gene61186:intron 50.0%
GGAAATGGGAAACATTCGGC+TGG - chr1.1:8023701-8023720 MS.gene61186:intron 50.0%
GGATGCAGAATGCTCAGTGT+CGG - chr1.1:8024390-8024409 MS.gene61186:CDS 50.0%
!! ACACCGCAAGTTTGTTGCTG+CGG - chr1.1:8023871-8023890 MS.gene61186:CDS 50.0%
!! CGTTATCGCGTTTTGAGCAG+TGG + chr1.1:8023295-8023314 None:intergenic 50.0%
ATGGCAGCAGCCATAGCTAG+TGG - chr1.1:8024529-8024548 MS.gene61186:intron 55.0%
TCAGCGGACCAAACAGTTCG+AGG + chr1.1:8023848-8023867 None:intergenic 55.0%
TTCCAATCGGCCCTAACTCG+CGG - chr1.1:8024787-8024806 MS.gene61186:intron 55.0%
!! CTGACTCGGCTGAAGAGTTC+CGG + chr1.1:8024728-8024747 None:intergenic 55.0%
GGGAAACATTCGGCTGGGAC+AGG - chr1.1:8023707-8023726 MS.gene61186:intron 60.0%
GAAGGTGGCCAGCCATCTCC+AGG - chr1.1:8024212-8024231 MS.gene61186:CDS 65.0%
TGCCGCGAGTTAGGGCCGAT+TGG + chr1.1:8024792-8024811 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 8022513 8025254 8022513 ID=MS.gene61186
chr1.1 mRNA 8022513 8025254 8022513 ID=MS.gene61186.t1;Parent=MS.gene61186
chr1.1 exon 8025252 8025254 8025252 ID=MS.gene61186.t1.exon1;Parent=MS.gene61186.t1
chr1.1 CDS 8025252 8025254 8025252 ID=cds.MS.gene61186.t1;Parent=MS.gene61186.t1
chr1.1 exon 8025009 8025111 8025009 ID=MS.gene61186.t1.exon2;Parent=MS.gene61186.t1
chr1.1 CDS 8025009 8025111 8025009 ID=cds.MS.gene61186.t1;Parent=MS.gene61186.t1
chr1.1 exon 8024326 8024478 8024326 ID=MS.gene61186.t1.exon3;Parent=MS.gene61186.t1
chr1.1 CDS 8024326 8024478 8024326 ID=cds.MS.gene61186.t1;Parent=MS.gene61186.t1
chr1.1 exon 8023853 8024239 8023853 ID=MS.gene61186.t1.exon4;Parent=MS.gene61186.t1
chr1.1 CDS 8023853 8024239 8023853 ID=cds.MS.gene61186.t1;Parent=MS.gene61186.t1
chr1.1 exon 8023534 8023610 8023534 ID=MS.gene61186.t1.exon5;Parent=MS.gene61186.t1
chr1.1 CDS 8023534 8023610 8023534 ID=cds.MS.gene61186.t1;Parent=MS.gene61186.t1
chr1.1 exon 8022513 8023292 8022513 ID=MS.gene61186.t1.exon6;Parent=MS.gene61186.t1
chr1.1 CDS 8022513 8023292 8022513 ID=cds.MS.gene61186.t1;Parent=MS.gene61186.t1
Gene Sequence

>MS.gene61186

ATGGTACCTTCTTTTTTGTATATATACTTCATAACATTCTTTTGTCAATCATTCTATCTTTGCATTCATCACTTATTATTTTTCTCTTTGTCAACGAAAATTCTTCCTTAAAAATCACTATTTTTTTGCTTTAATTTCTCAAGATGAATGATCAGTTTCCTATTGGAATGCGAGTTCTTGCGGTTGATGATGATAGAACATGTCTCAAGATTTTGGAGAAACTTCTCCAAAGGTGTCAATACCATGGTATGCTTCATCATCAACATCATATTATTGTTGTTTTTGTTTTATTTTGAAATATTAAAGATGGGTCCTTGATTTTAATCTTGTTTTTTGATGTGACAAATCTAATGATATATAGCTAGGGTTTTGGCTATGTTTTGGAGATACCTATATTTATGCATATGCTAGATTATTATTTTCAATAAAGTTGGTTCATTTTGAATCAAATATATATTTTTCAATATTATGTCCTCCAGCCAATGCTTGTAGAAATCAATTAGATTAGTTTTAAATTTTATTTGATATTGTTTAGGTTCAGACTAAATTATATTTGATCGATCACATTGTTGCTTCTTTCAAAGATTGGACATGATTTCGCTTTTAAAGTTGCAATTTTTTTCAAATATCTTTGTGTGCCTAATCTTTGGTGATCTTATGTTGTTTCTTGGATTTCAATTTTATAGATTTTATATTCTGATTGTATATGCAGTGTATCATTTTTTTCTCTTTCAGAATGATATTTATTTTAGTTATGGTTTGTTAATTTGTTTCAGTAACCACTGCTCAAAACGCGATAACGGCGTTGAACTTGTTGAGAGAAAACAAAAGCAATTTTGACCTAGTAATCAGCAATGTTCATATGCCAGACATGGATGGATTTAAGCTCCTTGAGCTTGTTGGACTTGAGATGGACCTACCTGTCATAAGTAAGTTATGCAATTCCTTCAATCTTATATTATTGATACATGTATAACAAATTATAGTATTTTGATTGCAAAGTGTTTGATTTCAGTGTTTTCTGCGAATGATGATCCAAAGATGGTGATGAAAGGAATTGAACATGGTGCGTGTGATTATCTGGTGAAACCTGTTAGACTGAAAGAGGTACAGATCATTTGGCAGCATGTAATCAGGAAGAAGAAAACTAGCAAAAGAAGCAATCATGACGCGCCTAATTCTGATAGTGGAAATGGGAAACATTCGGCTGGGACAGGAAATTCTGATAAAAATGAAAAGCCATCTAGAAAACGGAAGGATAAGAATGAAGATGATGGTGAGGAAGAAAGTGAGGATGATTATGACAATGATGATCAAACTGCGCAGAAGAAGCCTCGAACTGTTTGGTCCGCTGATTTACACCGCAAGTTTGTTGCTGCGGTTAATCAATTAGGCGTTGACAGTACGTTTTCCCTCTTTCTTCAATGCGCAAAAACTTGTCAGCATAATTTTTATCAATTGCTTATATTCGTCTTTTTCTTTCCTTTTTTCCAGTTTATCAAAATATTTGTGCAGATTATAGCAATCCAATGTATTATTTGAAGACTTCCTCAAATATTCTTTACTAAAAATACTAATGTTTAGCCATGCTACGAATTTTTCCGATTCTGAAGTGTTTTTCTCATGATAGTTGTTATCTTGCAGAGGCTGTACCGAAGAAGATTCTTGAACTGATGAATGTTGAAAATCTGACAAGGGAGAAGGTGGCCAGCCATCTCCAGGTACTTTTTCTTATCTCTTATGCTTTACCTTTAGAAGTTACGAAGCATCGACATAGACATGTAAACCTGTAACGAGCCTTACACATGGACACTGCTAATGGTTTGAATAAATGAAGTAATTGAATTAAACAACATATGGTGATTCGTGTTAGTGTCGGATGCAGAATGCTCAGTGTCGGTGCTACATAAATTATCAGTCTTTTCATTCAAGAAAACTTCCTGTTTTTTAATTTTTCTGCAGAAGTATAGACTCTATCTAAAAAGAATTAGTTGTGCGGAAGACAAACAAGATCATATGGCAGCAGCCATAGCTAGTGGTTCAGATACATCCTATTTAAGAAGTGGAGTTGGAGGACATTTGCATACATTGAATGGCTCTACACAGTTTCATAACCATTATAACAATCCTTTTAGATCCTTTCCATCTGGTGGTGTTATGAGTAGTAGATTCAACACACCTACTAATGTGAATATGAATGGATTGCATTCTGCCGGAACTCTTCAGCCGAGTCAGACACATAATTTAAACAACTTGACAGATGATCAGCTAAAGTTCCAATCGGCCCTAACTCGCGGCAATCCAAATGATGTTCAAAGAGGTATCTCTATTAGTCCTATCCAAAACATGACCAATAACCTCCCAAATTTCAGTTTCACAAACAATCCCTTGATGTTAGAAGGAAATTCTCAAGACAAACAAGTAGGTGAAGGATACAAAAATTTAGCATTGCAGAATTCACAGTTTCTCCCTTTACTTGAAAACAGAAGGTGCAATGGTATTTGGTCAAGCACAATGCAACAACTACCTGGAACAAACTCTTATCTTCCAAGAGAATCTTTTAACCATGCTGCTATGCCTCATGTGTCATTTCAAGGTTGGGATAATAACAATAATCATGATGGAAGTTACCATTCTTCTAATGTGATCGGCAGTTCAATAGGCTCTTCTATGATTCCTGGTATGAATGTTGTCGAGCAAGAAGGAAACTTGGACTACAATTATGGTGATTCGGTACAATGA
Protein sequence

>MS.gene61186.t1

MMNDQFPIGMRVLAVDDDRTCLKILEKLLQRCQYHVTTAQNAITALNLLRENKSNFDLVISNVHMPDMDGFKLLELVGLEMDLPVIMFSANDDPKMVMKGIEHGACDYLVKPVRLKEVQIIWQHVIRKKKTSKRSNHDAPNSDSGNGKHSAGTGNSDKNEKPSRKRKDKNEDDGEEESEDDYDNDDQTAQKKPRTVWSADLHRKFVAAVNQLGVDKAVPKKILELMNVENLTREKVASHLQKYRLYLKRISCAEDKQDHMAAAIASGSDTSYLRSGVGGHLHTLNGSTQFHNHYNNPFRSFPSGGVMSSRFNTPTNVNMNGLHSAGTLQPSQTHNLNNLTDDQLKFQSALTRGNPNDVQRGISISPIQNMTNNLPNFSFTNNPLMLEGNSQDKQVGEGYKNLALQNSQFLPLLENRRCNGIWSSTMQQLPGTNSYLPRESFNHAAMPHVSFQGWDNNNNHDGSYHSSNVIGSSIGSSMIPGMNVVEQEGNLDYNYGDSVQ