Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61278.t1 | XP_024637991.1 | 96.9 | 542 | 17 | 0 | 1 | 542 | 1 | 542 | 3.80E-300 | 1040 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61278.t1 | Q8W4H1 | 49.5 | 529 | 234 | 13 | 1 | 518 | 1 | 507 | 4.6e-121 | 436.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61278.t1 | A0A396IEH1 | 96.9 | 542 | 17 | 0 | 1 | 542 | 1 | 542 | 2.7e-300 | 1040.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene61278.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61278.t1 | MTR_4g099410 | 96.075 | 535 | 18 | 1 | 8 | 542 | 16 | 547 | 0.0 | 1058 |
| MS.gene61278.t1 | MTR_5g013370 | 65.524 | 525 | 132 | 7 | 1 | 522 | 1 | 479 | 0.0 | 643 |
| MS.gene61278.t1 | MTR_5g013370 | 67.901 | 405 | 93 | 5 | 1 | 402 | 1 | 371 | 0.0 | 521 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61278.t1 | AT4G17570 | 50.657 | 533 | 226 | 15 | 1 | 518 | 1 | 511 | 1.98e-143 | 423 |
| MS.gene61278.t1 | AT4G17570 | 50.094 | 533 | 225 | 16 | 1 | 518 | 1 | 507 | 1.34e-138 | 411 |
| MS.gene61278.t1 | AT4G17570 | 49.711 | 519 | 224 | 15 | 15 | 518 | 27 | 523 | 7.49e-131 | 392 |
| MS.gene61278.t1 | AT5G47140 | 46.154 | 533 | 206 | 13 | 1 | 518 | 1 | 467 | 2.94e-118 | 357 |
Find 109 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGATGTCTTGCAGTCTTC+AGG | 0.202442 | 8.2:-22773567 | None:intergenic |
| CCACATGCATTGCATAAAAT+TGG | 0.209606 | 8.2:-22770777 | None:intergenic |
| TGAGCAACCAAGCTAGAATT+TGG | 0.226392 | 8.2:-22774563 | None:intergenic |
| GTCCTTCTCGGTCAGTAGTC+TGG | 0.257209 | 8.2:+22771674 | MS.gene61278:CDS |
| TATCCTCATCAACAGCCTTT+TGG | 0.266134 | 8.2:-22771010 | None:intergenic |
| TGGAATCCTTGATTATATTC+AGG | 0.275290 | 8.2:-22770990 | None:intergenic |
| AGCTGCTCCTGTTGCAGTCT+TGG | 0.279584 | 8.2:-22772078 | None:intergenic |
| AACAGGATTGTTGTTGTTCA+TGG | 0.292850 | 8.2:-22771789 | None:intergenic |
| TAAGAACAAAGAAGTGAAAT+TGG | 0.296795 | 8.2:+22770914 | MS.gene61278:CDS |
| CGGGGAGATACTTCAGTAAT+TGG | 0.306286 | 8.2:-22773250 | None:intergenic |
| GTCTTTGATATCTCTTTGTT+TGG | 0.309370 | 8.2:+22773537 | MS.gene61278:CDS |
| GCTGCTCCTGTTGCAGTCTT+GGG | 0.330451 | 8.2:-22772077 | None:intergenic |
| TGGCATGAATTTCTCTTCTC+AGG | 0.335218 | 8.2:+22772026 | MS.gene61278:CDS |
| TCAGAAAGCTGCGTTCAATT+TGG | 0.340455 | 8.2:+22771071 | MS.gene61278:CDS |
| AATGAGGCATATTCATGTTA+TGG | 0.344182 | 8.2:+22771976 | MS.gene61278:CDS |
| AGCTGGAAAACGTAATGATA+TGG | 0.352108 | 8.2:+22774046 | MS.gene61278:CDS |
| TTCAGAAGAAGCAGAGAAAC+AGG | 0.359840 | 8.2:-22771806 | None:intergenic |
| TGCTGGCCCAAGACTGCAAC+AGG | 0.360278 | 8.2:+22772071 | MS.gene61278:CDS |
| ATGAATATGCCTCATTCATT+AGG | 0.368414 | 8.2:-22771969 | None:intergenic |
| GCACACCACTTTGGCGTAAC+GGG | 0.374021 | 8.2:+22770742 | MS.gene61278:CDS |
| ATACTGCTAAATTTCCTGAT+AGG | 0.379031 | 8.2:+22773279 | MS.gene61278:CDS |
| GACATGGAAGCATGCTTATT+AGG | 0.380641 | 8.2:+22771878 | MS.gene61278:CDS |
| TAACCAGATTCTAACCTATC+AGG | 0.386767 | 8.2:-22773293 | None:intergenic |
| AAGACTGCAAGACATCTAAA+AGG | 0.389266 | 8.2:+22773571 | MS.gene61278:CDS |
| TTTGATATCTCTTTGTTTGG+AGG | 0.399259 | 8.2:+22773540 | MS.gene61278:CDS |
| GATAATGCTTATGCTGCATC+TGG | 0.405843 | 8.2:+22770957 | MS.gene61278:CDS |
| ACAAGCAATAGATCAAGTTC+AGG | 0.405979 | 8.2:+22771032 | MS.gene61278:CDS |
| TGGTTAATTTAGGTCCTTCT+CGG | 0.410225 | 8.2:+22771662 | MS.gene61278:intron |
| CATTGCGAGGAAATGCAAAT+AGG | 0.412981 | 8.2:-22774430 | None:intergenic |
| TAGATGTCTTGCAGTCTTCA+GGG | 0.413125 | 8.2:-22773566 | None:intergenic |
| GTTTGATAGCTTTCAATTCA+AGG | 0.413150 | 8.2:+22773476 | MS.gene61278:CDS |
| ATTGCATAAAATTGGCTTCT+CGG | 0.425605 | 8.2:-22770769 | None:intergenic |
| CGTTGATGAGAGTTCGGATC+AGG | 0.428748 | 8.2:+22774484 | MS.gene61278:CDS |
| AAACTTCGTTGATGAGAGTT+CGG | 0.431868 | 8.2:+22774478 | MS.gene61278:CDS |
| GGAATCCTTGATTATATTCA+GGG | 0.435974 | 8.2:-22770989 | None:intergenic |
| TTTCTCTGCTTCTTCTGAAG+AGG | 0.445798 | 8.2:+22771810 | MS.gene61278:CDS |
| TTGCATAAAATTGGCTTCTC+GGG | 0.450813 | 8.2:-22770768 | None:intergenic |
| CCGATGGTCTCTGTTGAGAT+AGG | 0.451064 | 8.2:+22771856 | MS.gene61278:CDS |
| GAGCAACCAAGCTAGAATTT+GGG | 0.456850 | 8.2:-22774562 | None:intergenic |
| CAATGGTGGCTTGCACATGC+TGG | 0.457641 | 8.2:+22774448 | MS.gene61278:CDS |
| CTCTTCTCAGGGAGTTGCAA+AGG | 0.470360 | 8.2:+22772038 | MS.gene61278:CDS |
| CCTGCTCCCAAATTCTAGCT+TGG | 0.478457 | 8.2:+22774556 | MS.gene61278:CDS |
| GAAAGCTGCGTTCAATTTGG+CGG | 0.481959 | 8.2:+22771074 | MS.gene61278:CDS |
| CAACAATGAGGAGTCCCAAA+AGG | 0.482639 | 8.2:+22774342 | MS.gene61278:CDS |
| TCCTTCTCGGTCAGTAGTCT+GGG | 0.482866 | 8.2:+22771675 | MS.gene61278:CDS |
| CAGAAAGGTGGAAACGAAGC+TGG | 0.483260 | 8.2:+22774029 | MS.gene61278:intron |
| GGTGGCAAAGAAGCTGTAGA+TGG | 0.485633 | 8.2:+22774386 | MS.gene61278:CDS |
| GCCAGTGTAATCACTAAGCA+TGG | 0.486056 | 8.2:-22772007 | None:intergenic |
| TGTGGAAAAGAATTGTTAGA+TGG | 0.494479 | 8.2:-22774524 | None:intergenic |
| ATTATACTCCTTTACATGCT+CGG | 0.500610 | 8.2:+22770832 | MS.gene61278:CDS |
| CTATTTGCATTTCCTCGCAA+TGG | 0.505348 | 8.2:+22774431 | MS.gene61278:CDS |
| CATAAAATTGGCTTCTCGGG+TGG | 0.513655 | 8.2:-22770765 | None:intergenic |
| TTGAGGATCAGAGAGTTTCA+AGG | 0.515344 | 8.2:+22770871 | MS.gene61278:CDS |
| GGCATGAATTTCTCTTCTCA+GGG | 0.528773 | 8.2:+22772027 | MS.gene61278:CDS |
| AATTCTAGCTTGGTTGCTCA+AGG | 0.529989 | 8.2:+22774566 | MS.gene61278:CDS |
| CGAGTATACTGAGCTACTAC+TGG | 0.530369 | 8.2:-22774594 | None:intergenic |
| CGCAACATTACTTGATGCCA+CGG | 0.532105 | 8.2:-22774078 | None:intergenic |
| GGCACACCACTTTGGCGTAA+CGG | 0.532158 | 8.2:+22770741 | MS.gene61278:intron |
| AATAGATCAAGTTCAGGGTC+AGG | 0.535043 | 8.2:+22771038 | MS.gene61278:CDS |
| TAAACAATGCCTAATGAATG+AGG | 0.536919 | 8.2:+22771960 | MS.gene61278:CDS |
| TTGCAATAGGCACACCACTT+TGG | 0.540892 | 8.2:+22770733 | MS.gene61278:intron |
| TTTCAGAAACTTCTCGAGGA+AGG | 0.544680 | 8.2:+22773513 | MS.gene61278:CDS |
| CCAAGCTAGAATTTGGGAGC+AGG | 0.546142 | 8.2:-22774556 | None:intergenic |
| ACCTGTCAAATCACTAGCAT+CGG | 0.546237 | 8.2:-22771099 | None:intergenic |
| GCAAAGGTCAGAAACTCTGC+TGG | 0.547430 | 8.2:+22772054 | MS.gene61278:CDS |
| GTATCTGTCCGAGCATGTAA+AGG | 0.548439 | 8.2:-22770840 | None:intergenic |
| AGAAGAATGCTTCAGACGCC+CGG | 0.550473 | 8.2:-22771731 | None:intergenic |
| ACCGATGCTAGTGATTTGAC+AGG | 0.552424 | 8.2:+22771098 | MS.gene61278:CDS |
| AACAATGAGGAGTCCCAAAA+GGG | 0.557773 | 8.2:+22774343 | MS.gene61278:CDS |
| TTCACCCCTGAATATAATCA+AGG | 0.559752 | 8.2:+22770984 | MS.gene61278:CDS |
| ACATTACTTGATGCCACGGC+AGG | 0.560071 | 8.2:-22774074 | None:intergenic |
| GGATCTCGATGGAGGACAAA+GGG | 0.566793 | 8.2:+22770798 | MS.gene61278:CDS |
| TCGTCACGAGCTATAGAGCT+AGG | 0.567657 | 8.2:-22771904 | None:intergenic |
| ATATAATCAAGGATTCCAAA+AGG | 0.569920 | 8.2:+22770995 | MS.gene61278:CDS |
| GATTGAGACATGGGAAAACA+AGG | 0.576682 | 8.2:+22769461 | None:intergenic |
| TTTGCATTTCCTCGCAATGG+TGG | 0.577452 | 8.2:+22774434 | MS.gene61278:CDS |
| ATAGTAAAAGCTGGCACTGG+TGG | 0.578827 | 8.2:+22774368 | MS.gene61278:CDS |
| AATTTAGCAGTATCAACCAC+GGG | 0.579103 | 8.2:-22773269 | None:intergenic |
| TTACAAAAGTGAAACTCCGA+TGG | 0.581064 | 8.2:+22771840 | MS.gene61278:CDS |
| AAAAGGGTGATAGTAAAAGC+TGG | 0.582014 | 8.2:+22774359 | MS.gene61278:CDS |
| ATTCCAAAAGGCTGTTGATG+AGG | 0.585516 | 8.2:+22771007 | MS.gene61278:CDS |
| CAAGCAATAGATCAAGTTCA+GGG | 0.586403 | 8.2:+22771033 | MS.gene61278:CDS |
| AGCTCGTGACGAAGAGTCTG+AGG | 0.591447 | 8.2:+22771915 | MS.gene61278:CDS |
| GTCTCTGTTGAGATAGGACA+TGG | 0.594614 | 8.2:+22771862 | MS.gene61278:CDS |
| ATGCTTATGCTGCATCTGGA+TGG | 0.594811 | 8.2:+22770961 | MS.gene61278:CDS |
| GTGATAGTAAAAGCTGGCAC+TGG | 0.595857 | 8.2:+22774365 | MS.gene61278:CDS |
| TGGATCTCGATGGAGGACAA+AGG | 0.599405 | 8.2:+22770797 | MS.gene61278:CDS |
| TGCAACAGGAGCAGCTTGTG+TGG | 0.602488 | 8.2:+22772085 | MS.gene61278:CDS |
| CTTCTACGAGTGCAGAAAGG+TGG | 0.623014 | 8.2:+22774017 | MS.gene61278:intron |
| GTAACTCCACAGTGAAAGCA+AGG | 0.627202 | 8.2:-22769485 | None:intergenic |
| CCAGTGTAATCACTAAGCAT+GGG | 0.628822 | 8.2:-22772006 | None:intergenic |
| CAGAATTGAAGACAACAATG+AGG | 0.642781 | 8.2:+22774330 | MS.gene61278:intron |
| GGGAGCAGGAGCTCTGCCTG+TGG | 0.642912 | 8.2:-22774542 | None:intergenic |
| ATGTGCAAGCCACCATTGCG+AGG | 0.645717 | 8.2:-22774443 | None:intergenic |
| CCTATCTCAACAGAGACCAT+CGG | 0.650405 | 8.2:-22771856 | None:intergenic |
| TGATATGGAATCTCCTGCCG+TGG | 0.657248 | 8.2:+22774061 | MS.gene61278:CDS |
| GAATCCTTGATTATATTCAG+GGG | 0.659607 | 8.2:-22770988 | None:intergenic |
| TCCCAGACTACTGACCGAGA+AGG | 0.665184 | 8.2:-22771676 | None:intergenic |
| GCAATGCATGTGGATCTCGA+TGG | 0.669120 | 8.2:+22770787 | MS.gene61278:CDS |
| GGTGGCCCGTTACGCCAAAG+TGG | 0.670404 | 8.2:-22770747 | None:intergenic |
| CCCATGCTTAGTGATTACAC+TGG | 0.670617 | 8.2:+22772006 | MS.gene61278:CDS |
| ATGCATGTGGATCTCGATGG+AGG | 0.680507 | 8.2:+22770790 | MS.gene61278:CDS |
| TTAGGATGTAGTGAACTACA+AGG | 0.684148 | 8.2:+22773193 | MS.gene61278:intron |
| AAATTTAGCAGTATCAACCA+CGG | 0.687637 | 8.2:-22773270 | None:intergenic |
| TGATAGCTTTCAATTCAAGG+AGG | 0.694555 | 8.2:+22773479 | MS.gene61278:CDS |
| CAAGGACCTTGCTTTCACTG+TGG | 0.702292 | 8.2:+22769479 | MS.gene61278:CDS |
| GTCAGTAGTCTGGGATACTG+CGG | 0.720733 | 8.2:+22771684 | MS.gene61278:CDS |
| ATTACTGAAGTATCTCCCCG+TGG | 0.761483 | 8.2:+22773253 | MS.gene61278:CDS |
| ATTTAGCAGTATCAACCACG+GGG | 0.799155 | 8.2:-22773268 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAACTGTATAT+TGG | - | chr8.2:22769529-22769548 | None:intergenic | 10.0% |
| !! | AATATATTATTTGTTTATGT+TGG | - | chr8.2:22769698-22769717 | None:intergenic | 10.0% |
| !!! | AAATTTAAAATGATTCATTT+AGG | + | chr8.2:22770277-22770296 | MS.gene61278:intron | 10.0% |
| !!! | ATATTTGATTTGAATAAAAA+TGG | - | chr8.2:22772670-22772689 | None:intergenic | 10.0% |
| !!! | TTTTGTAATAATTTCATATT+CGG | - | chr8.2:22774180-22774199 | None:intergenic | 10.0% |
| !!! | TTTTTTTGCAATTTTTTTTA+TGG | + | chr8.2:22769547-22769566 | MS.gene61278:intron | 10.0% |
| !! | CTAACTCTTAAAAATAAAAA+AGG | - | chr8.2:22773955-22773974 | None:intergenic | 15.0% |
| !! | TCTTAAAAATAAAAAAGGAT+AGG | - | chr8.2:22773950-22773969 | None:intergenic | 15.0% |
| !!! | AAATGATTTTTAATACTGTT+TGG | + | chr8.2:22772824-22772843 | MS.gene61278:intron | 15.0% |
| !!! | AATGATTTTTAATACTGTTT+GGG | + | chr8.2:22772825-22772844 | MS.gene61278:intron | 15.0% |
| !!! | CATATTAATATAATGTGTTT+TGG | + | chr8.2:22772739-22772758 | MS.gene61278:intron | 15.0% |
| !!! | TTAAAGTATTTTGTAAATGA+AGG | + | chr8.2:22771416-22771435 | MS.gene61278:intron | 15.0% |
| !! | AAAATTGAAACTTATGTCAA+AGG | - | chr8.2:22773391-22773410 | None:intergenic | 20.0% |
| !! | AAAGCTTCAAAATATGATAA+AGG | - | chr8.2:22770095-22770114 | None:intergenic | 20.0% |
| !! | AACAATAGTTTGGTTAATTT+AGG | + | chr8.2:22771652-22771671 | MS.gene61278:intron | 20.0% |
| !! | AACATAACAAATTGACATTA+TGG | + | chr8.2:22773025-22773044 | MS.gene61278:intron | 20.0% |
| !! | AATATGATAAAGGATAATCA+TGG | - | chr8.2:22770085-22770104 | None:intergenic | 20.0% |
| !! | ATAAATTCATCAAGCAAATA+TGG | - | chr8.2:22770414-22770433 | None:intergenic | 20.0% |
| !! | CATATCATTCATATTTATTC+AGG | - | chr8.2:22773834-22773853 | None:intergenic | 20.0% |
| !! | GAATAACTATTAAGTCTTAA+AGG | - | chr8.2:22772458-22772477 | None:intergenic | 20.0% |
| !! | GAATCATAAACAAATGTAAT+TGG | + | chr8.2:22769856-22769875 | MS.gene61278:intron | 20.0% |
| !! | TAAATTCATCAAGCAAATAT+GGG | - | chr8.2:22770413-22770432 | None:intergenic | 20.0% |
| !! | TAACTCTAATAACAATAGTT+TGG | + | chr8.2:22771642-22771661 | MS.gene61278:intron | 20.0% |
| !! | TATGTAAAATATCTAGTAAC+AGG | + | chr8.2:22770490-22770509 | MS.gene61278:intron | 20.0% |
| !! | TGTGATTGTTAATTGTTTAT+CGG | + | chr8.2:22770631-22770650 | MS.gene61278:intron | 20.0% |
| !!! | AAAGCATAACATATTTTGTT+TGG | + | chr8.2:22773882-22773901 | MS.gene61278:intron | 20.0% |
| !!! | AAATGATATGATCATGATTT+TGG | + | chr8.2:22772867-22772886 | MS.gene61278:intron | 20.0% |
| !!! | AATGATATGATCATGATTTT+GGG | + | chr8.2:22772868-22772887 | MS.gene61278:intron | 20.0% |
| !!! | ACATTATGGTTTGATTTAAT+TGG | + | chr8.2:22773039-22773058 | MS.gene61278:intron | 20.0% |
| !!! | ATAACATATTTTGTTTGGTT+TGG | + | chr8.2:22773887-22773906 | MS.gene61278:intron | 20.0% |
| !!! | TATTCCTTTTTGAAATTTCA+GGG | + | chr8.2:22772473-22772492 | MS.gene61278:intron | 20.0% |
| !!! | TTATTCCTTTTTGAAATTTC+AGG | + | chr8.2:22772472-22772491 | MS.gene61278:intron | 20.0% |
| !!! | TTCAGCATTCATTAATTTTA+TGG | - | chr8.2:22773152-22773171 | None:intergenic | 20.0% |
| !!! | TTGCTTTTATTAAAGAAACA+AGG | - | chr8.2:22771621-22771640 | None:intergenic | 20.0% |
| ! | AAAAAGAAAAGAGGATAATG+TGG | + | chr8.2:22770000-22770019 | MS.gene61278:intron | 25.0% |
| ! | AAATATTAGAGATAAGACTG+TGG | + | chr8.2:22772399-22772418 | MS.gene61278:intron | 25.0% |
| ! | AACCTCTTACAATTGTATAT+TGG | + | chr8.2:22773097-22773116 | MS.gene61278:intron | 25.0% |
| ! | ATAATTTCATGCATTACTCT+TGG | + | chr8.2:22772775-22772794 | MS.gene61278:intron | 25.0% |
| ! | ATATAATCAAGGATTCCAAA+AGG | + | chr8.2:22770995-22771014 | MS.gene61278:CDS | 25.0% |
| ! | ATGAATAGTCTTTGTACATA+TGG | + | chr8.2:22772366-22772385 | MS.gene61278:intron | 25.0% |
| ! | ATTGATGTGTTTCAAAGTAA+AGG | - | chr8.2:22774221-22774240 | None:intergenic | 25.0% |
| ! | CTACAAACGCATTTATAATT+AGG | + | chr8.2:22772911-22772930 | MS.gene61278:intron | 25.0% |
| ! | GAACATAAGAAAAAGAAAAG+AGG | + | chr8.2:22769991-22770010 | MS.gene61278:intron | 25.0% |
| ! | TAACAAATAATCCTTGCAAT+AGG | + | chr8.2:22770720-22770739 | MS.gene61278:intron | 25.0% |
| ! | TAAGAACAAAGAAGTGAAAT+TGG | + | chr8.2:22770914-22770933 | MS.gene61278:CDS | 25.0% |
| ! | TAATTTCATGCATTACTCTT+GGG | + | chr8.2:22772776-22772795 | MS.gene61278:intron | 25.0% |
| ! | TAGTTCACTTATTTCACATT+TGG | + | chr8.2:22769958-22769977 | MS.gene61278:intron | 25.0% |
| ! | TATCAGTATTCAAGATCATA+AGG | - | chr8.2:22770551-22770570 | None:intergenic | 25.0% |
| ! | TCAAATATTCTATCCTAACA+TGG | + | chr8.2:22772682-22772701 | MS.gene61278:intron | 25.0% |
| ! | TCTATAGTATTTCAACTGAA+AGG | - | chr8.2:22771191-22771210 | None:intergenic | 25.0% |
| ! | TCTTACAATTGTATATTGGT+CGG | + | chr8.2:22773101-22773120 | MS.gene61278:intron | 25.0% |
| ! | TTGATGAATTTATTGCATAC+CGG | + | chr8.2:22770421-22770440 | MS.gene61278:intron | 25.0% |
| ! | TTGATTATGCTCAAACAAAT+AGG | - | chr8.2:22771226-22771245 | None:intergenic | 25.0% |
| ! | TTGGTTTCAAAATTTGTATC+TGG | + | chr8.2:22773916-22773935 | MS.gene61278:intron | 25.0% |
| ! | TTTCACCATATAGATATTTG+TGG | + | chr8.2:22772986-22773005 | MS.gene61278:intron | 25.0% |
| !! | AGAACACTATAATTTTCTCA+AGG | + | chr8.2:22773629-22773648 | MS.gene61278:CDS | 25.0% |
| !! | CAAGAAGTGCATAATAAAAT+GGG | + | chr8.2:22771243-22771262 | MS.gene61278:intron | 25.0% |
| !! | TCAAGAAGTGCATAATAAAA+TGG | + | chr8.2:22771242-22771261 | MS.gene61278:intron | 25.0% |
| !!! | AACCTGGAAAATTTTGATTT+TGG | - | chr8.2:22774127-22774146 | None:intergenic | 25.0% |
| !!! | AATTTGACTTGAGATACAAT+TGG | + | chr8.2:22773802-22773821 | MS.gene61278:intron | 25.0% |
| !!! | ATAAGTTTTATTCCCTATTC+CGG | - | chr8.2:22773420-22773439 | None:intergenic | 25.0% |
| AAAATTGAAACATGTGTTGC+TGG | + | chr8.2:22769672-22769691 | MS.gene61278:intron | 30.0% | |
| AAACAATCCATAAAAAGAGG+GGG | - | chr8.2:22772596-22772615 | None:intergenic | 30.0% | |
| AAATTTAGCAGTATCAACCA+CGG | - | chr8.2:22773273-22773292 | None:intergenic | 30.0% | |
| AATATCTGTCATGTTTGGTT+AGG | + | chr8.2:22773175-22773194 | MS.gene61278:intron | 30.0% | |
| AATGAGGCATATTCATGTTA+TGG | + | chr8.2:22771976-22771995 | MS.gene61278:CDS | 30.0% | |
| AATGCAATATCTGTCATGTT+TGG | + | chr8.2:22773170-22773189 | MS.gene61278:intron | 30.0% | |
| ACAACTGATAACAATAACAC+AGG | - | chr8.2:22774259-22774278 | None:intergenic | 30.0% | |
| AGATATTGGACAATTTAAGC+AGG | + | chr8.2:22770514-22770533 | MS.gene61278:intron | 30.0% | |
| AGGGAATAAAACTTATTGAC+CGG | + | chr8.2:22773424-22773443 | MS.gene61278:intron | 30.0% | |
| ATACTGCTAAATTTCCTGAT+AGG | + | chr8.2:22773279-22773298 | MS.gene61278:CDS | 30.0% | |
| ATCTAGTAACAGGAAGATAT+TGG | + | chr8.2:22770500-22770519 | MS.gene61278:intron | 30.0% | |
| ATGAATATGCCTCATTCATT+AGG | - | chr8.2:22771972-22771991 | None:intergenic | 30.0% | |
| ATTATACTCCTTTACATGCT+CGG | + | chr8.2:22770832-22770851 | MS.gene61278:CDS | 30.0% | |
| ATTTAAGAGGTCATGTATAC+TGG | - | chr8.2:22770382-22770401 | None:intergenic | 30.0% | |
| CAAACAATCCATAAAAAGAG+GGG | - | chr8.2:22772597-22772616 | None:intergenic | 30.0% | |
| CATATGTGTAACTTTAGTAG+TGG | - | chr8.2:22772264-22772283 | None:intergenic | 30.0% | |
| CATCTCCACAAATATCTATA+TGG | - | chr8.2:22772994-22773013 | None:intergenic | 30.0% | |
| CCAAACAATCCATAAAAAGA+GGG | - | chr8.2:22772598-22772617 | None:intergenic | 30.0% | |
| CTTGAAAAACTAGAAGTTCT+TGG | + | chr8.2:22772507-22772526 | MS.gene61278:CDS | 30.0% | |
| GAATCCTTGATTATATTCAG+GGG | - | chr8.2:22770991-22771010 | None:intergenic | 30.0% | |
| GAATTGCAAATGAACATATG+AGG | + | chr8.2:22771291-22771310 | MS.gene61278:intron | 30.0% | |
| GACCAATATACAATTGTAAG+AGG | - | chr8.2:22773102-22773121 | None:intergenic | 30.0% | |
| GGAATCCTTGATTATATTCA+GGG | - | chr8.2:22770992-22771011 | None:intergenic | 30.0% | |
| GTCTTTGATATCTCTTTGTT+TGG | + | chr8.2:22773537-22773556 | MS.gene61278:CDS | 30.0% | |
| TAAACAATGCCTAATGAATG+AGG | + | chr8.2:22771960-22771979 | MS.gene61278:CDS | 30.0% | |
| TGAACTAATCCAATCTAAAC+TGG | - | chr8.2:22773983-22774002 | None:intergenic | 30.0% | |
| TGAACTCAGAAAACATCTTA+AGG | - | chr8.2:22770590-22770609 | None:intergenic | 30.0% | |
| TGGAATCCTTGATTATATTC+AGG | - | chr8.2:22770993-22771012 | None:intergenic | 30.0% | |
| TGTGGAAAAGAATTGTTAGA+TGG | - | chr8.2:22774527-22774546 | None:intergenic | 30.0% | |
| TGTTTATCGGTCTTTCTAAT+TGG | + | chr8.2:22770644-22770663 | MS.gene61278:intron | 30.0% | |
| TTATCATTGCTTCAAAGTTC+TGG | + | chr8.2:22771340-22771359 | MS.gene61278:intron | 30.0% | |
| TTGTCCCTGAAATTTCAAAA+AGG | - | chr8.2:22772480-22772499 | None:intergenic | 30.0% | |
| ! | AAGTTTCAATTTTGTCTCTC+CGG | + | chr8.2:22773398-22773417 | MS.gene61278:intron | 30.0% |
| ! | AGCCAAAATCAAAATTTTCC+AGG | + | chr8.2:22774122-22774141 | MS.gene61278:CDS | 30.0% |
| ! | ATCTAACAATTCTTTTCCAC+AGG | + | chr8.2:22774526-22774545 | MS.gene61278:CDS | 30.0% |
| ! | ATCTTCTTTTCCTTGCAAAA+GGG | + | chr8.2:22770445-22770464 | MS.gene61278:intron | 30.0% |
| ! | ATGATAACTTGTCTTCCTTT+AGG | - | chr8.2:22771327-22771346 | None:intergenic | 30.0% |
| ! | ATTGCATAAAATTGGCTTCT+CGG | - | chr8.2:22770772-22770791 | None:intergenic | 30.0% |
| ! | GTTTGATAGCTTTCAATTCA+AGG | + | chr8.2:22773476-22773495 | MS.gene61278:CDS | 30.0% |
| ! | TATCTTCTTTTCCTTGCAAA+AGG | + | chr8.2:22770444-22770463 | MS.gene61278:intron | 30.0% |
| ! | TGATAACTTGTCTTCCTTTA+GGG | - | chr8.2:22771326-22771345 | None:intergenic | 30.0% |
| ! | TTATTTTCAGAAACTTCTCG+AGG | + | chr8.2:22773509-22773528 | MS.gene61278:CDS | 30.0% |
| ! | TTTGATATCTCTTTGTTTGG+AGG | + | chr8.2:22773540-22773559 | MS.gene61278:CDS | 30.0% |
| ! | TTTTAATACTGTTTGGGAGT+AGG | + | chr8.2:22772831-22772850 | MS.gene61278:intron | 30.0% |
| !! | ATCCACTCATGTGTTTTAAA+AGG | + | chr8.2:22770046-22770065 | MS.gene61278:intron | 30.0% |
| !! | CAATTCTGAAATTTGCAAGA+TGG | - | chr8.2:22774318-22774337 | None:intergenic | 30.0% |
| !! | TAAGACTGTGGAATTTGTTT+TGG | + | chr8.2:22772411-22772430 | MS.gene61278:intron | 30.0% |
| !! | TTGTTGTTGTCTAGTGTTTT+GGG | + | chr8.2:22769732-22769751 | MS.gene61278:intron | 30.0% |
| !!! | ATCCTTTTAAAACACATGAG+TGG | - | chr8.2:22770051-22770070 | None:intergenic | 30.0% |
| !!! | TTAGTTTTGCCAGTTTAGAT+TGG | + | chr8.2:22773971-22773990 | MS.gene61278:intron | 30.0% |
| !!! | TTTTTTTCCCCCTCTTTTTA+TGG | + | chr8.2:22772586-22772605 | MS.gene61278:intron | 30.0% |
| AAAAGGGTGATAGTAAAAGC+TGG | + | chr8.2:22774359-22774378 | MS.gene61278:CDS | 35.0% | |
| AAGACTGCAAGACATCTAAA+AGG | + | chr8.2:22773571-22773590 | MS.gene61278:CDS | 35.0% | |
| AATTTAGCAGTATCAACCAC+GGG | - | chr8.2:22773272-22773291 | None:intergenic | 35.0% | |
| ACAAGCAATAGATCAAGTTC+AGG | + | chr8.2:22771032-22771051 | MS.gene61278:CDS | 35.0% | |
| AGCTGGAAAACGTAATGATA+TGG | + | chr8.2:22774046-22774065 | MS.gene61278:CDS | 35.0% | |
| ATGCTTGGATTTGAACCAAA+AGG | - | chr8.2:22770348-22770367 | None:intergenic | 35.0% | |
| ATGGGTGAACTCAATTTAAG+AGG | - | chr8.2:22770395-22770414 | None:intergenic | 35.0% | |
| CAAGCAATAGATCAAGTTCA+GGG | + | chr8.2:22771033-22771052 | MS.gene61278:CDS | 35.0% | |
| CAGAATTGAAGACAACAATG+AGG | + | chr8.2:22774330-22774349 | MS.gene61278:intron | 35.0% | |
| CCACATGCATTGCATAAAAT+TGG | - | chr8.2:22770780-22770799 | None:intergenic | 35.0% | |
| CGTGAAGATTTGCATATATG+AGG | + | chr8.2:22771526-22771545 | MS.gene61278:intron | 35.0% | |
| CTTGTCAGATATCACATCTA+GGG | + | chr8.2:22773719-22773738 | MS.gene61278:intron | 35.0% | |
| GACACAAAACACATCAAAGT+AGG | - | chr8.2:22769789-22769808 | None:intergenic | 35.0% | |
| GCCAAACAATCCATAAAAAG+AGG | - | chr8.2:22772599-22772618 | None:intergenic | 35.0% | |
| GTGTCTCAAAACAATTGCAA+TGG | + | chr8.2:22771446-22771465 | MS.gene61278:intron | 35.0% | |
| TAACCAGATTCTAACCTATC+AGG | - | chr8.2:22773296-22773315 | None:intergenic | 35.0% | |
| TCAAAAAAGAGAACATGTGC+CGG | + | chr8.2:22771712-22771731 | MS.gene61278:CDS | 35.0% | |
| TCAATAGAACTAATCCTGCA+AGG | + | chr8.2:22770159-22770178 | MS.gene61278:intron | 35.0% | |
| TCAGAATCTGTTGAATGCAT+AGG | + | chr8.2:22769892-22769911 | MS.gene61278:intron | 35.0% | |
| TGATAGCTTTCAATTCAAGG+AGG | + | chr8.2:22773479-22773498 | MS.gene61278:CDS | 35.0% | |
| TGGATTTGTGAAATGTCCAT+TGG | + | chr8.2:22770020-22770039 | MS.gene61278:intron | 35.0% | |
| TGGTTAATTTAGGTCCTTCT+CGG | + | chr8.2:22771662-22771681 | MS.gene61278:intron | 35.0% | |
| TGTTTCTTCATAACCGATCA+TGG | + | chr8.2:22771156-22771175 | MS.gene61278:intron | 35.0% | |
| TTACAAAAGTGAAACTCCGA+TGG | + | chr8.2:22771840-22771859 | MS.gene61278:CDS | 35.0% | |
| TTAGGATGTAGTGAACTACA+AGG | + | chr8.2:22773193-22773212 | MS.gene61278:intron | 35.0% | |
| TTCACCCCTGAATATAATCA+AGG | + | chr8.2:22770984-22771003 | MS.gene61278:CDS | 35.0% | |
| TTGCAAGGAAAAGAAGATAC+CGG | - | chr8.2:22770443-22770462 | None:intergenic | 35.0% | |
| TTGGACAATTTAAGCAGGAA+TGG | + | chr8.2:22770519-22770538 | MS.gene61278:intron | 35.0% | |
| TTGTCAGATATCACATCTAG+GGG | + | chr8.2:22773720-22773739 | MS.gene61278:intron | 35.0% | |
| TTTCCTGATAGGTTAGAATC+TGG | + | chr8.2:22773290-22773309 | MS.gene61278:intron | 35.0% | |
| ! | AAACTTCGTTGATGAGAGTT+CGG | + | chr8.2:22774478-22774497 | MS.gene61278:CDS | 35.0% |
| ! | AACAGGATTGTTGTTGTTCA+TGG | - | chr8.2:22771792-22771811 | None:intergenic | 35.0% |
| ! | AATTTTCTCAAGGTTTGTGC+TGG | + | chr8.2:22773639-22773658 | MS.gene61278:intron | 35.0% |
| ! | AATTTTGTCTCTCCGGAATA+GGG | + | chr8.2:22773405-22773424 | MS.gene61278:intron | 35.0% |
| ! | AGCTTTTACTATCACCCTTT+TGG | - | chr8.2:22774360-22774379 | None:intergenic | 35.0% |
| ! | CCAATTTTATGCAATGCATG+TGG | + | chr8.2:22770777-22770796 | MS.gene61278:CDS | 35.0% |
| ! | CTCTTTTCTTGTGTACAAGA+GGG | + | chr8.2:22770674-22770693 | MS.gene61278:intron | 35.0% |
| ! | GACAAGAGATTTTGTTAACC+TGG | - | chr8.2:22774143-22774162 | None:intergenic | 35.0% |
| ! | GCTTTTACTATCACCCTTTT+GGG | - | chr8.2:22774359-22774378 | None:intergenic | 35.0% |
| ! | GGAAATGCAAATAGGCTTTT+CGG | - | chr8.2:22774425-22774444 | None:intergenic | 35.0% |
| ! | GTTTTCTGAGTTCAGTTTTG+TGG | + | chr8.2:22770596-22770615 | MS.gene61278:intron | 35.0% |
| ! | TCTCTTTTCTTGTGTACAAG+AGG | + | chr8.2:22770673-22770692 | MS.gene61278:intron | 35.0% |
| ! | TTAGTACTTGCTACAAGACT+GGG | - | chr8.2:22772645-22772664 | None:intergenic | 35.0% |
| ! | TTGATAGTATTCTCCTGAAG+TGG | + | chr8.2:22772322-22772341 | MS.gene61278:intron | 35.0% |
| ! | TTGCATAAAATTGGCTTCTC+GGG | - | chr8.2:22770771-22770790 | None:intergenic | 35.0% |
| ! | TTTAGTACTTGCTACAAGAC+TGG | - | chr8.2:22772646-22772665 | None:intergenic | 35.0% |
| !! | CCCTCTTTTTATGGATTGTT+TGG | + | chr8.2:22772595-22772614 | MS.gene61278:intron | 35.0% |
| !! | GTTGTTGTTGTCTAGTGTTT+TGG | + | chr8.2:22769731-22769750 | MS.gene61278:intron | 35.0% |
| !! | TTGCAGGATTAGTTCTATTG+AGG | - | chr8.2:22770160-22770179 | None:intergenic | 35.0% |
| !! | TTGTTTGGTTTGGATGTAGT+TGG | + | chr8.2:22773897-22773916 | MS.gene61278:intron | 35.0% |
| !!! | GCACATGTTCTCTTTTTTGA+AGG | - | chr8.2:22771712-22771731 | None:intergenic | 35.0% |
| AACAATGAGGAGTCCCAAAA+GGG | + | chr8.2:22774343-22774362 | MS.gene61278:CDS | 40.0% | |
| AACATTGATGCTGCGATACT+AGG | + | chr8.2:22770307-22770326 | MS.gene61278:intron | 40.0% | |
| AATAGATCAAGTTCAGGGTC+AGG | + | chr8.2:22771038-22771057 | MS.gene61278:CDS | 40.0% | |
| AATGTTGAAGTCGTTGCTGT+TGG | + | chr8.2:22770243-22770262 | MS.gene61278:intron | 40.0% | |
| ACCTGTCAAATCACTAGCAT+CGG | - | chr8.2:22771102-22771121 | None:intergenic | 40.0% | |
| ATCTACTGCAGCTCAAAAAC+AGG | + | chr8.2:22771592-22771611 | MS.gene61278:intron | 40.0% | |
| ATGCTAGTGATTTGACAGGT+TGG | + | chr8.2:22771102-22771121 | MS.gene61278:intron | 40.0% | |
| ATTCCAAAAGGCTGTTGATG+AGG | + | chr8.2:22771007-22771026 | MS.gene61278:CDS | 40.0% | |
| ATTCTTCTACGAGTGCAGAA+AGG | + | chr8.2:22774014-22774033 | MS.gene61278:intron | 40.0% | |
| ATTTAGCAGTATCAACCACG+GGG | - | chr8.2:22773271-22773290 | None:intergenic | 40.0% | |
| CAAAAAAGAGAACATGTGCC+GGG | + | chr8.2:22771713-22771732 | MS.gene61278:CDS | 40.0% | |
| CATTGCGAGGAAATGCAAAT+AGG | - | chr8.2:22774433-22774452 | None:intergenic | 40.0% | |
| CCAGTGTAATCACTAAGCAT+GGG | - | chr8.2:22772009-22772028 | None:intergenic | 40.0% | |
| CTATTTGCATTTCCTCGCAA+TGG | + | chr8.2:22774431-22774450 | MS.gene61278:CDS | 40.0% | |
| CTGGTAAGTAAGACAATGCT+TGG | - | chr8.2:22770363-22770382 | None:intergenic | 40.0% | |
| GAGCAACCAAGCTAGAATTT+GGG | - | chr8.2:22774565-22774584 | None:intergenic | 40.0% | |
| GATAATGCTTATGCTGCATC+TGG | + | chr8.2:22770957-22770976 | MS.gene61278:CDS | 40.0% | |
| GCTTGTCAGATATCACATCT+AGG | + | chr8.2:22773718-22773737 | MS.gene61278:intron | 40.0% | |
| GGCATGAATTTCTCTTCTCA+GGG | + | chr8.2:22772027-22772046 | MS.gene61278:CDS | 40.0% | |
| GGTTAATTGCTATGCACTGA+TGG | - | chr8.2:22773081-22773100 | None:intergenic | 40.0% | |
| TAAGATCTTCGTACCACTTC+AGG | - | chr8.2:22772338-22772357 | None:intergenic | 40.0% | |
| TAGATGTCTTGCAGTCTTCA+GGG | - | chr8.2:22773569-22773588 | None:intergenic | 40.0% | |
| TCAGAAAGCTGCGTTCAATT+TGG | + | chr8.2:22771071-22771090 | MS.gene61278:CDS | 40.0% | |
| TGAGCAACCAAGCTAGAATT+TGG | - | chr8.2:22774566-22774585 | None:intergenic | 40.0% | |
| TGGCATGAATTTCTCTTCTC+AGG | + | chr8.2:22772026-22772045 | MS.gene61278:CDS | 40.0% | |
| TTAGATGTCTTGCAGTCTTC+AGG | - | chr8.2:22773570-22773589 | None:intergenic | 40.0% | |
| TTCAGAAGAAGCAGAGAAAC+AGG | - | chr8.2:22771809-22771828 | None:intergenic | 40.0% | |
| TTGAGGATCAGAGAGTTTCA+AGG | + | chr8.2:22770871-22770890 | MS.gene61278:CDS | 40.0% | |
| TTTCAGAAACTTCTCGAGGA+AGG | + | chr8.2:22773513-22773532 | MS.gene61278:CDS | 40.0% | |
| ! | CAAAGTCTGTTTTGCAACCT+TGG | + | chr8.2:22769630-22769649 | MS.gene61278:intron | 40.0% |
| ! | CAATTTTGTCTCTCCGGAAT+AGG | + | chr8.2:22773404-22773423 | MS.gene61278:intron | 40.0% |
| ! | CGGATAAATGCTAAGCCTTT+TGG | + | chr8.2:22770330-22770349 | MS.gene61278:intron | 40.0% |
| ! | GACATGGAAGCATGCTTATT+AGG | + | chr8.2:22771878-22771897 | MS.gene61278:CDS | 40.0% |
| ! | GTCTTCCTTTAGGGAAACAA+AGG | - | chr8.2:22771317-22771336 | None:intergenic | 40.0% |
| ! | TATCCTCATCAACAGCCTTT+TGG | - | chr8.2:22771013-22771032 | None:intergenic | 40.0% |
| ! | TTTCTCTGCTTCTTCTGAAG+AGG | + | chr8.2:22771810-22771829 | MS.gene61278:CDS | 40.0% |
| !! | AATTCTAGCTTGGTTGCTCA+AGG | + | chr8.2:22774566-22774585 | MS.gene61278:CDS | 40.0% |
| !! | CACATGAGTGGATTAACCAA+TGG | - | chr8.2:22770039-22770058 | None:intergenic | 40.0% |
| !!! | GACAGATACTGTCGATTTTG+AGG | + | chr8.2:22770854-22770873 | MS.gene61278:CDS | 40.0% |
| !!! | GTTGTCTAGTGTTTTGGGAT+TGG | + | chr8.2:22769737-22769756 | MS.gene61278:intron | 40.0% |
| AAAGTGGTGTGCCTATTGCA+AGG | - | chr8.2:22770734-22770753 | None:intergenic | 45.0% | |
| AAGGACAATGCTGCCATGAT+CGG | - | chr8.2:22771172-22771191 | None:intergenic | 45.0% | |
| ACACTGCTGCAAACCATGTT+AGG | - | chr8.2:22772698-22772717 | None:intergenic | 45.0% | |
| ACCGATGCTAGTGATTTGAC+AGG | + | chr8.2:22771098-22771117 | MS.gene61278:CDS | 45.0% | |
| ATGCTTATGCTGCATCTGGA+TGG | + | chr8.2:22770961-22770980 | MS.gene61278:CDS | 45.0% | |
| ATTGATGCTGCGATACTAGG+CGG | + | chr8.2:22770310-22770329 | MS.gene61278:intron | 45.0% | |
| CAAAATCCCAATCAGTGCCA+AGG | - | chr8.2:22769650-22769669 | None:intergenic | 45.0% | |
| CAACAATGAGGAGTCCCAAA+AGG | + | chr8.2:22774342-22774361 | MS.gene61278:CDS | 45.0% | |
| CCCATGCTTAGTGATTACAC+TGG | + | chr8.2:22772006-22772025 | MS.gene61278:CDS | 45.0% | |
| CCTATCTCAACAGAGACCAT+CGG | - | chr8.2:22771859-22771878 | None:intergenic | 45.0% | |
| CGAGTATACTGAGCTACTAC+TGG | - | chr8.2:22774597-22774616 | None:intergenic | 45.0% | |
| CGCAACATTACTTGATGCCA+CGG | - | chr8.2:22774081-22774100 | None:intergenic | 45.0% | |
| CGGGGAGATACTTCAGTAAT+TGG | - | chr8.2:22773253-22773272 | None:intergenic | 45.0% | |
| GAAAGCTGCGTTCAATTTGG+CGG | + | chr8.2:22771074-22771093 | MS.gene61278:CDS | 45.0% | |
| GCATTACTCTTGGGACTTTC+TGG | + | chr8.2:22772785-22772804 | MS.gene61278:intron | 45.0% | |
| GCCAGTGTAATCACTAAGCA+TGG | - | chr8.2:22772010-22772029 | None:intergenic | 45.0% | |
| GTAACTCCACAGTGAAAGCA+AGG | - | chr8.2:22769488-22769507 | None:intergenic | 45.0% | |
| GTATCTGTCCGAGCATGTAA+AGG | - | chr8.2:22770843-22770862 | None:intergenic | 45.0% | |
| GTCTCTGTTGAGATAGGACA+TGG | + | chr8.2:22771862-22771881 | MS.gene61278:CDS | 45.0% | |
| GTGATAGTAAAAGCTGGCAC+TGG | + | chr8.2:22774365-22774384 | MS.gene61278:CDS | 45.0% | |
| TGCTGCACATACAACAATGC+CGG | - | chr8.2:22773446-22773465 | None:intergenic | 45.0% | |
| TTGCAATAGGCACACCACTT+TGG | + | chr8.2:22770733-22770752 | MS.gene61278:intron | 45.0% | |
| TTTAAGAGTTGCAGCCTTGC+AGG | - | chr8.2:22770176-22770195 | None:intergenic | 45.0% | |
| TTTGCATTTCCTCGCAATGG+TGG | + | chr8.2:22774434-22774453 | MS.gene61278:CDS | 45.0% | |
| ! | ATAGTAAAAGCTGGCACTGG+TGG | + | chr8.2:22774368-22774387 | MS.gene61278:CDS | 45.0% |
| ! | ATTACTGAAGTATCTCCCCG+TGG | + | chr8.2:22773253-22773272 | MS.gene61278:CDS | 45.0% |
| ! | CATAAAATTGGCTTCTCGGG+TGG | - | chr8.2:22770768-22770787 | None:intergenic | 45.0% |
| ! | TGAGGCCTTTGTTTCCCTAA+AGG | + | chr8.2:22771309-22771328 | MS.gene61278:intron | 45.0% |
| ! | TGGTTTGCAGCAGTGTTGTT+TGG | + | chr8.2:22772702-22772721 | MS.gene61278:intron | 45.0% |
| !! | TTGCAACCTTGGCACTGATT+GGG | + | chr8.2:22769641-22769660 | MS.gene61278:intron | 45.0% |
| !! | TTTGCAACCTTGGCACTGAT+TGG | + | chr8.2:22769640-22769659 | MS.gene61278:intron | 45.0% |
| ACATTACTTGATGCCACGGC+AGG | - | chr8.2:22774077-22774096 | None:intergenic | 50.0% | |
| AGAAGAATGCTTCAGACGCC+CGG | - | chr8.2:22771734-22771753 | None:intergenic | 50.0% | |
| ATGCATGTGGATCTCGATGG+AGG | + | chr8.2:22770790-22770809 | MS.gene61278:CDS | 50.0% | |
| CAAGGACCTTGCTTTCACTG+TGG | + | chr8.2:22769479-22769498 | MS.gene61278:CDS | 50.0% | |
| CAGAAAGGTGGAAACGAAGC+TGG | + | chr8.2:22774029-22774048 | MS.gene61278:intron | 50.0% | |
| CCAAGCTAGAATTTGGGAGC+AGG | - | chr8.2:22774559-22774578 | None:intergenic | 50.0% | |
| CCGATGGTCTCTGTTGAGAT+AGG | + | chr8.2:22771856-22771875 | MS.gene61278:CDS | 50.0% | |
| CTCTTCTCAGGGAGTTGCAA+AGG | + | chr8.2:22772038-22772057 | MS.gene61278:CDS | 50.0% | |
| CTTCTACGAGTGCAGAAAGG+TGG | + | chr8.2:22774017-22774036 | MS.gene61278:intron | 50.0% | |
| GCAAAGGTCAGAAACTCTGC+TGG | + | chr8.2:22772054-22772073 | MS.gene61278:CDS | 50.0% | |
| GCAATGCATGTGGATCTCGA+TGG | + | chr8.2:22770787-22770806 | MS.gene61278:CDS | 50.0% | |
| GGATCTCGATGGAGGACAAA+GGG | + | chr8.2:22770798-22770817 | MS.gene61278:CDS | 50.0% | |
| GGTGGCAAAGAAGCTGTAGA+TGG | + | chr8.2:22774386-22774405 | MS.gene61278:CDS | 50.0% | |
| TCCTTCTCGGTCAGTAGTCT+GGG | + | chr8.2:22771675-22771694 | MS.gene61278:CDS | 50.0% | |
| TCGTCACGAGCTATAGAGCT+AGG | - | chr8.2:22771907-22771926 | None:intergenic | 50.0% | |
| TGATATGGAATCTCCTGCCG+TGG | + | chr8.2:22774061-22774080 | MS.gene61278:CDS | 50.0% | |
| TGGATCTCGATGGAGGACAA+AGG | + | chr8.2:22770797-22770816 | MS.gene61278:CDS | 50.0% | |
| ! | CATAGCAACGCCCTTTTGCA+AGG | - | chr8.2:22770458-22770477 | None:intergenic | 50.0% |
| ! | CCTGCTCCCAAATTCTAGCT+TGG | + | chr8.2:22774556-22774575 | MS.gene61278:CDS | 50.0% |
| ! | CGTTGATGAGAGTTCGGATC+AGG | + | chr8.2:22774484-22774503 | MS.gene61278:CDS | 50.0% |
| ! | GTCAGTAGTCTGGGATACTG+CGG | + | chr8.2:22771684-22771703 | MS.gene61278:CDS | 50.0% |
| AGCTCGTGACGAAGAGTCTG+AGG | + | chr8.2:22771915-22771934 | MS.gene61278:CDS | 55.0% | |
| AGCTGCTCCTGTTGCAGTCT+TGG | - | chr8.2:22772081-22772100 | None:intergenic | 55.0% | |
| ATGTGCAAGCCACCATTGCG+AGG | - | chr8.2:22774446-22774465 | None:intergenic | 55.0% | |
| GCACACCACTTTGGCGTAAC+GGG | + | chr8.2:22770742-22770761 | MS.gene61278:CDS | 55.0% | |
| GCTGCTCCTGTTGCAGTCTT+GGG | - | chr8.2:22772080-22772099 | None:intergenic | 55.0% | |
| GGCACACCACTTTGGCGTAA+CGG | + | chr8.2:22770741-22770760 | MS.gene61278:intron | 55.0% | |
| GTCCTTCTCGGTCAGTAGTC+TGG | + | chr8.2:22771674-22771693 | MS.gene61278:CDS | 55.0% | |
| TCCCAGACTACTGACCGAGA+AGG | - | chr8.2:22771679-22771698 | None:intergenic | 55.0% | |
| TGCAACAGGAGCAGCTTGTG+TGG | + | chr8.2:22772085-22772104 | MS.gene61278:CDS | 55.0% | |
| ! | CAATGGTGGCTTGCACATGC+TGG | + | chr8.2:22774448-22774467 | MS.gene61278:CDS | 55.0% |
| TGCTGGCCCAAGACTGCAAC+AGG | + | chr8.2:22772071-22772090 | MS.gene61278:CDS | 60.0% | |
| GGTGGCCCGTTACGCCAAAG+TGG | - | chr8.2:22770750-22770769 | None:intergenic | 65.0% | |
| GGGAGCAGGAGCTCTGCCTG+TGG | - | chr8.2:22774545-22774564 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 22769470 | 22774634 | 22769470 | ID=MS.gene61278 |
| chr8.2 | mRNA | 22769470 | 22774634 | 22769470 | ID=MS.gene61278.t1;Parent=MS.gene61278 |
| chr8.2 | exon | 22769470 | 22769509 | 22769470 | ID=MS.gene61278.t1.exon1;Parent=MS.gene61278.t1 |
| chr8.2 | CDS | 22769470 | 22769509 | 22769470 | ID=cds.MS.gene61278.t1;Parent=MS.gene61278.t1 |
| chr8.2 | exon | 22770742 | 22771119 | 22770742 | ID=MS.gene61278.t1.exon2;Parent=MS.gene61278.t1 |
| chr8.2 | CDS | 22770742 | 22771119 | 22770742 | ID=cds.MS.gene61278.t1;Parent=MS.gene61278.t1 |
| chr8.2 | exon | 22771674 | 22772106 | 22771674 | ID=MS.gene61278.t1.exon3;Parent=MS.gene61278.t1 |
| chr8.2 | CDS | 22771674 | 22772106 | 22771674 | ID=cds.MS.gene61278.t1;Parent=MS.gene61278.t1 |
| chr8.2 | exon | 22772494 | 22772566 | 22772494 | ID=MS.gene61278.t1.exon4;Parent=MS.gene61278.t1 |
| chr8.2 | CDS | 22772494 | 22772566 | 22772494 | ID=cds.MS.gene61278.t1;Parent=MS.gene61278.t1 |
| chr8.2 | exon | 22773197 | 22773300 | 22773197 | ID=MS.gene61278.t1.exon5;Parent=MS.gene61278.t1 |
| chr8.2 | CDS | 22773197 | 22773300 | 22773197 | ID=cds.MS.gene61278.t1;Parent=MS.gene61278.t1 |
| chr8.2 | exon | 22773464 | 22773650 | 22773464 | ID=MS.gene61278.t1.exon6;Parent=MS.gene61278.t1 |
| chr8.2 | CDS | 22773464 | 22773650 | 22773464 | ID=cds.MS.gene61278.t1;Parent=MS.gene61278.t1 |
| chr8.2 | exon | 22774032 | 22774143 | 22774032 | ID=MS.gene61278.t1.exon7;Parent=MS.gene61278.t1 |
| chr8.2 | CDS | 22774032 | 22774143 | 22774032 | ID=cds.MS.gene61278.t1;Parent=MS.gene61278.t1 |
| chr8.2 | exon | 22774333 | 22774634 | 22774333 | ID=MS.gene61278.t1.exon8;Parent=MS.gene61278.t1 |
| chr8.2 | CDS | 22774333 | 22774634 | 22774333 | ID=cds.MS.gene61278.t1;Parent=MS.gene61278.t1 |
| Gene Sequence |
| Protein sequence |
