Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61286.t1 | KEH31637.1 | 90 | 418 | 36 | 2 | 139 | 556 | 104 | 515 | 2.70E-224 | 788.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61286.t1 | F4IXE7 | 32.5 | 419 | 245 | 14 | 144 | 538 | 619 | 1023 | 2.5e-53 | 211.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61286.t1 | A0A072UPL4 | 90.0 | 418 | 36 | 2 | 139 | 556 | 104 | 515 | 1.9e-224 | 788.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene61286.t1 | TR | PHD |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61286.t1 | MTR_4g099530 | 82.634 | 524 | 47 | 4 | 66 | 556 | 3 | 515 | 0.0 | 886 |
MS.gene61286.t1 | MTR_1g103830 | 34.679 | 421 | 239 | 12 | 143 | 538 | 603 | 1012 | 8.75e-66 | 233 |
MS.gene61286.t1 | MTR_1g072130 | 32.701 | 422 | 248 | 10 | 143 | 538 | 809 | 1220 | 6.85e-63 | 224 |
MS.gene61286.t1 | MTR_2g078040 | 30.024 | 423 | 262 | 13 | 140 | 538 | 754 | 1166 | 6.14e-53 | 195 |
MS.gene61286.t1 | MTR_5g071340 | 28.289 | 456 | 281 | 17 | 112 | 538 | 646 | 1084 | 3.30e-48 | 181 |
MS.gene61286.t1 | MTR_3g464550 | 26.522 | 460 | 284 | 15 | 123 | 555 | 585 | 1017 | 1.97e-45 | 172 |
MS.gene61286.t1 | MTR_7g109640 | 28.894 | 398 | 233 | 12 | 145 | 511 | 383 | 761 | 2.85e-42 | 162 |
MS.gene61286.t1 | MTR_5g024500 | 26.932 | 427 | 268 | 11 | 146 | 538 | 3 | 419 | 2.95e-40 | 151 |
MS.gene61286.t1 | MTR_5g024390 | 26.698 | 427 | 269 | 11 | 146 | 538 | 3 | 419 | 2.12e-39 | 149 |
MS.gene61286.t1 | MTR_3g103120 | 23.467 | 473 | 300 | 14 | 106 | 538 | 382 | 832 | 1.12e-32 | 134 |
MS.gene61286.t1 | MTR_7g095140 | 28.479 | 309 | 199 | 8 | 251 | 550 | 17 | 312 | 1.22e-32 | 129 |
MS.gene61286.t1 | MTR_3g103110 | 28.076 | 317 | 196 | 9 | 240 | 538 | 489 | 791 | 5.49e-32 | 131 |
MS.gene61286.t1 | MTR_1g068930 | 24.153 | 443 | 235 | 15 | 156 | 528 | 435 | 846 | 1.12e-27 | 118 |
MS.gene61286.t1 | MTR_1g068930 | 24.153 | 443 | 235 | 15 | 156 | 528 | 472 | 883 | 1.18e-27 | 118 |
MS.gene61286.t1 | MTR_1g062330 | 23.696 | 460 | 255 | 13 | 156 | 538 | 362 | 802 | 2.05e-27 | 117 |
MS.gene61286.t1 | MTR_7g102610 | 22.273 | 440 | 241 | 14 | 156 | 516 | 507 | 924 | 5.56e-26 | 113 |
MS.gene61286.t1 | MTR_4g056990 | 24.390 | 451 | 254 | 16 | 156 | 544 | 200 | 625 | 4.16e-25 | 110 |
MS.gene61286.t1 | MTR_4g050090 | 22.961 | 466 | 252 | 15 | 156 | 538 | 200 | 641 | 3.42e-23 | 104 |
MS.gene61286.t1 | MTR_3g103160 | 32.317 | 164 | 108 | 2 | 376 | 538 | 275 | 436 | 3.40e-20 | 94.0 |
MS.gene61286.t1 | MTR_4g057290 | 22.756 | 479 | 249 | 17 | 125 | 512 | 66 | 514 | 9.63e-19 | 90.1 |
MS.gene61286.t1 | MTR_2g084425 | 25.714 | 175 | 125 | 2 | 365 | 536 | 844 | 1016 | 2.54e-17 | 86.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61286.t1 | AT4G14920 | 35.154 | 421 | 236 | 11 | 143 | 539 | 577 | 984 | 4.60e-69 | 241 |
MS.gene61286.t1 | AT4G14920 | 35.154 | 421 | 236 | 11 | 143 | 539 | 577 | 984 | 4.76e-69 | 241 |
MS.gene61286.t1 | AT4G14920 | 35.154 | 421 | 236 | 11 | 143 | 539 | 577 | 984 | 4.76e-69 | 241 |
MS.gene61286.t1 | AT5G36740 | 33.560 | 441 | 258 | 10 | 125 | 539 | 519 | 950 | 1.37e-68 | 240 |
MS.gene61286.t1 | AT5G36740 | 33.560 | 441 | 258 | 10 | 125 | 539 | 519 | 950 | 1.37e-68 | 240 |
MS.gene61286.t1 | AT5G36740 | 33.645 | 428 | 244 | 10 | 143 | 539 | 389 | 807 | 6.97e-68 | 237 |
MS.gene61286.t1 | AT1G05380 | 33.023 | 430 | 243 | 12 | 143 | 543 | 517 | 930 | 1.83e-66 | 234 |
MS.gene61286.t1 | AT1G05380 | 33.023 | 430 | 243 | 12 | 143 | 543 | 517 | 930 | 1.83e-66 | 234 |
MS.gene61286.t1 | AT1G05380 | 33.023 | 430 | 243 | 12 | 143 | 543 | 517 | 930 | 1.83e-66 | 234 |
MS.gene61286.t1 | AT5G36670 | 31.291 | 457 | 261 | 12 | 125 | 539 | 519 | 964 | 2.24e-58 | 211 |
MS.gene61286.t1 | AT5G36670 | 31.291 | 457 | 261 | 12 | 125 | 539 | 519 | 964 | 2.24e-58 | 211 |
MS.gene61286.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 144 | 538 | 574 | 978 | 3.25e-58 | 210 |
MS.gene61286.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 144 | 538 | 619 | 1023 | 4.25e-58 | 210 |
MS.gene61286.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 144 | 538 | 619 | 1023 | 4.25e-58 | 210 |
MS.gene61286.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 144 | 538 | 619 | 1023 | 4.25e-58 | 210 |
MS.gene61286.t1 | AT3G14980 | 32.458 | 419 | 245 | 14 | 144 | 538 | 619 | 1023 | 1.02e-57 | 208 |
MS.gene61286.t1 | AT5G36670 | 31.306 | 444 | 247 | 12 | 143 | 539 | 389 | 821 | 2.09e-57 | 207 |
MS.gene61286.t1 | AT5G36670 | 30.835 | 467 | 260 | 13 | 125 | 539 | 519 | 974 | 5.36e-57 | 207 |
MS.gene61286.t1 | AT5G36740 | 32.461 | 382 | 224 | 9 | 125 | 480 | 519 | 892 | 2.68e-52 | 192 |
MS.gene61286.t1 | AT5G36740 | 32.461 | 382 | 224 | 9 | 125 | 480 | 519 | 892 | 2.68e-52 | 192 |
MS.gene61286.t1 | AT5G36670 | 32.461 | 382 | 224 | 9 | 125 | 480 | 519 | 892 | 2.68e-52 | 192 |
MS.gene61286.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 140 | 539 | 362 | 778 | 2.23e-40 | 157 |
MS.gene61286.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 140 | 539 | 593 | 1009 | 3.73e-40 | 156 |
MS.gene61286.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 140 | 539 | 593 | 1009 | 3.77e-40 | 156 |
MS.gene61286.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 140 | 539 | 593 | 1009 | 3.77e-40 | 156 |
MS.gene61286.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 140 | 539 | 584 | 1000 | 3.93e-40 | 156 |
MS.gene61286.t1 | AT5G58610 | 27.778 | 432 | 265 | 14 | 140 | 539 | 584 | 1000 | 5.56e-40 | 156 |
MS.gene61286.t1 | AT5G58610 | 26.303 | 422 | 258 | 13 | 140 | 539 | 584 | 974 | 3.04e-37 | 148 |
MS.gene61286.t1 | AT5G58610 | 26.303 | 422 | 258 | 13 | 140 | 539 | 584 | 974 | 4.37e-37 | 147 |
MS.gene61286.t1 | AT3G14980 | 31.003 | 329 | 190 | 13 | 144 | 448 | 619 | 934 | 1.16e-34 | 140 |
MS.gene61286.t1 | AT3G53680 | 24.169 | 451 | 252 | 15 | 156 | 538 | 403 | 831 | 7.48e-32 | 131 |
MS.gene61286.t1 | AT3G53680 | 24.169 | 451 | 252 | 15 | 156 | 538 | 405 | 833 | 7.99e-32 | 131 |
MS.gene61286.t1 | AT5G58610 | 27.513 | 378 | 228 | 13 | 140 | 485 | 593 | 956 | 1.17e-31 | 130 |
MS.gene61286.t1 | AT5G58610 | 27.513 | 378 | 228 | 13 | 140 | 485 | 584 | 947 | 2.00e-31 | 130 |
MS.gene61286.t1 | AT2G37520 | 23.516 | 455 | 251 | 14 | 156 | 538 | 386 | 815 | 2.41e-31 | 129 |
MS.gene61286.t1 | AT2G27980 | 24.301 | 465 | 250 | 15 | 156 | 538 | 613 | 1057 | 1.68e-29 | 124 |
MS.gene61286.t1 | AT2G36720 | 23.861 | 461 | 249 | 16 | 156 | 536 | 533 | 971 | 2.13e-28 | 120 |
MS.gene61286.t1 | AT2G36720 | 23.861 | 461 | 249 | 16 | 156 | 536 | 533 | 971 | 2.13e-28 | 120 |
MS.gene61286.t1 | AT5G58610 | 26.765 | 340 | 203 | 13 | 140 | 447 | 584 | 909 | 3.54e-23 | 104 |
MS.gene61286.t1 | AT5G63900 | 25.424 | 295 | 205 | 8 | 247 | 538 | 258 | 540 | 1.98e-21 | 98.6 |
Find 119 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCCCATTGATATTATTT+TGG | 0.141230 | 8.2:-22660231 | None:intergenic |
ACGAATTTGCCATTTGTTAA+TGG | 0.158481 | 8.2:+22661097 | MS.gene61286:CDS |
TCACTTATTTCCACATAATT+TGG | 0.186213 | 8.2:-22658892 | None:intergenic |
TCCCAGAAATTACCTATTTC+AGG | 0.195115 | 8.2:-22659012 | None:intergenic |
GACCTGAAATAGGTAATTTC+TGG | 0.234540 | 8.2:+22659010 | MS.gene61286:CDS |
CTTTCAACCATTTACTAATC+AGG | 0.274878 | 8.2:-22659521 | None:intergenic |
ATTTACTAATCAGGATGTTT+TGG | 0.283205 | 8.2:-22659512 | None:intergenic |
TTGAAAATTCGACCGGTTAT+CGG | 0.303297 | 8.2:-22659366 | None:intergenic |
AAAACATCCTGATTAGTAAA+TGG | 0.312020 | 8.2:+22659514 | MS.gene61286:CDS |
TGCTTCTAATTGACAGTATT+AGG | 0.320200 | 8.2:-22661666 | None:intergenic |
TCCGGATTAATACTCGTTTC+CGG | 0.320410 | 8.2:-22659108 | None:intergenic |
TCAACAGTTTGTGGATTAGA+TGG | 0.321798 | 8.2:-22661489 | None:intergenic |
TGGACTTGAATGAGCCATTC+GGG | 0.345809 | 8.2:+22661631 | MS.gene61286:CDS |
TCCATTGGCAAACTTTGTTC+CGG | 0.346997 | 8.2:-22659126 | None:intergenic |
CCTGGACTCTACAGATTTCA+TGG | 0.350659 | 8.2:+22661020 | MS.gene61286:intron |
TTGAAGGGTTAGAAGCAAAC+TGG | 0.364828 | 8.2:+22658941 | MS.gene61286:CDS |
CTTGTTTCGTTCATTGATGA+TGG | 0.366832 | 8.2:-22659156 | None:intergenic |
AAATTACCTATTTCAGGTCT+TGG | 0.368746 | 8.2:-22659006 | None:intergenic |
CGTAGACCAAGACCTGAAAT+AGG | 0.369525 | 8.2:+22659000 | MS.gene61286:CDS |
TAAACAAACAATGTCATGTA+TGG | 0.389738 | 8.2:-22659583 | None:intergenic |
GCATACCTCTTTACAACTTA+CGG | 0.394078 | 8.2:-22660091 | None:intergenic |
TGCAGCTGCTTGCATGTTGA+TGG | 0.397741 | 8.2:+22660330 | MS.gene61286:CDS |
GCAACCATACAAACGCATTT+CGG | 0.399165 | 8.2:+22659467 | MS.gene61286:CDS |
GTTTGTTTAGTTTGTGGAAA+AGG | 0.400119 | 8.2:+22659597 | MS.gene61286:CDS |
TGAAATAGCTACCATTGTTC+CGG | 0.403012 | 8.2:+22659089 | MS.gene61286:CDS |
GCTATTTCATTCACCGATGA+TGG | 0.410514 | 8.2:-22659075 | None:intergenic |
TCAACAAACAAGTCATAATC+TGG | 0.410645 | 8.2:+22659185 | MS.gene61286:CDS |
ATGGGAATGAGAGGTATTCT+TGG | 0.411367 | 8.2:+22660245 | MS.gene61286:CDS |
TACACTGCTTGTTGCATTGG+CGG | 0.412327 | 8.2:-22659897 | None:intergenic |
ACTTACACTGCTTGTTGCAT+TGG | 0.420126 | 8.2:-22659900 | None:intergenic |
GACATTGTTTGTTTAGTTTG+TGG | 0.426333 | 8.2:+22659591 | MS.gene61286:CDS |
CTGCAAGTGCAAATACTGTA+AGG | 0.426643 | 8.2:+22659837 | MS.gene61286:CDS |
GGAATCCAAAATAATATCAA+TGG | 0.427814 | 8.2:+22660226 | MS.gene61286:CDS |
ATTAAGCAAAAGACTTCTAC+TGG | 0.430490 | 8.2:+22661611 | MS.gene61286:CDS |
CTGGACTTGAATGAGCCATT+CGG | 0.434486 | 8.2:+22661630 | MS.gene61286:CDS |
GAAGTCCCCGCTGTTGCGCT+TGG | 0.436355 | 8.2:-22659234 | None:intergenic |
AAAGATTGATGAGAAATTGA+AGG | 0.437819 | 8.2:+22660195 | MS.gene61286:intron |
GAGAAATTGAAGGGATCAAT+CGG | 0.439072 | 8.2:+22660205 | MS.gene61286:CDS |
ACCTGAAATAGGTAATTTCT+GGG | 0.445985 | 8.2:+22659011 | MS.gene61286:CDS |
CAATTATCTCCATTAACAAA+TGG | 0.453252 | 8.2:-22661106 | None:intergenic |
ATGTTGATGGAAGAAGCTTT+TGG | 0.456514 | 8.2:+22660343 | MS.gene61286:CDS |
GTTAATGGAGATAATTGAAT+CGG | 0.460264 | 8.2:+22661112 | MS.gene61286:CDS |
TTGCTTAATCGTATAGCTCC+GGG | 0.462605 | 8.2:-22661597 | None:intergenic |
CTCAGGAAAACGACAACCAT+TGG | 0.462642 | 8.2:+22659803 | MS.gene61286:CDS |
GAAACTCCAAGCGCAACAGC+GGG | 0.464068 | 8.2:+22659228 | MS.gene61286:CDS |
TTGGAGAGTCCTCCAACAAA+TGG | 0.464964 | 8.2:+22660264 | MS.gene61286:CDS |
TTTGCTTAATCGTATAGCTC+CGG | 0.467808 | 8.2:-22661598 | None:intergenic |
GCCACCGAAATGCGTTTGTA+TGG | 0.477551 | 8.2:-22659471 | None:intergenic |
TTCCACATTTCAACAGTTTG+TGG | 0.481433 | 8.2:-22661498 | None:intergenic |
TTCGAAGTCTTGAAGTTGAA+AGG | 0.481443 | 8.2:+22661457 | MS.gene61286:CDS |
AGAAACTCCAAGCGCAACAG+CGG | 0.487445 | 8.2:+22659227 | MS.gene61286:CDS |
CCGAGGTGCGTTACCATGAT+GGG | 0.489289 | 8.2:+22659337 | MS.gene61286:CDS |
GAATCCAAAATAATATCAAT+GGG | 0.493433 | 8.2:+22660227 | MS.gene61286:CDS |
TTGTTCCGTAAGTTGTAAAG+AGG | 0.493762 | 8.2:+22660086 | MS.gene61286:CDS |
ACCGAGGTGCGTTACCATGA+TGG | 0.496123 | 8.2:+22659336 | MS.gene61286:CDS |
TAGCTCCGGGGAACATCAAA+AGG | 0.501144 | 8.2:-22661584 | None:intergenic |
ATGATAACAGACACACATAC+TGG | 0.502452 | 8.2:+22660367 | MS.gene61286:CDS |
TGGAAAAGGAGAAGATGAAG+GGG | 0.508556 | 8.2:+22659611 | MS.gene61286:CDS |
TCCGGAAACGAGTATTAATC+CGG | 0.511461 | 8.2:+22659107 | MS.gene61286:CDS |
TGTGGAAAAGGAGAAGATGA+AGG | 0.530192 | 8.2:+22659609 | MS.gene61286:CDS |
TCCGGAACAAAGTTTGCCAA+TGG | 0.531404 | 8.2:+22659125 | MS.gene61286:CDS |
AAGATTGATGAGAAATTGAA+GGG | 0.532048 | 8.2:+22660196 | MS.gene61286:intron |
AGCACAAGAACGGTGATAAG+TGG | 0.533107 | 8.2:-22659661 | None:intergenic |
GAAAGTGAGTCAAATATTGA+AGG | 0.536289 | 8.2:+22658925 | MS.gene61286:CDS |
GTCGCAACAGCTACATAAGA+TGG | 0.537125 | 8.2:-22659394 | None:intergenic |
GATGGCAGCATATACTTTGA+GGG | 0.537214 | 8.2:+22658858 | None:intergenic |
GGCTCCATTGAAAATTCGAC+CGG | 0.537301 | 8.2:-22659373 | None:intergenic |
GATGATGGAACTGTTTCCAT+TGG | 0.538815 | 8.2:-22659141 | None:intergenic |
AACTGAAACACCTCCATCAT+CGG | 0.540100 | 8.2:+22659062 | MS.gene61286:CDS |
AGTTGTCAACCATGCTAGGA+TGG | 0.543516 | 8.2:-22659292 | None:intergenic |
AGATGGCAGCATATACTTTG+AGG | 0.544295 | 8.2:+22658857 | None:intergenic |
GACCGTCGACCTCGTCGACC+TGG | 0.547724 | 8.2:-22658970 | None:intergenic |
CTGTAAGGGTGATGATGAAG+AGG | 0.550087 | 8.2:+22659852 | MS.gene61286:CDS |
TGGCGGCACATGATGTCTAA+AGG | 0.550630 | 8.2:-22659880 | None:intergenic |
ACTTGCAAGGAAATTGATGA+AGG | 0.553512 | 8.2:+22659312 | MS.gene61286:CDS |
GCCTCATCTGTGGCAATGAA+AGG | 0.555749 | 8.2:-22661062 | None:intergenic |
TGCAAGTTGTCAACCATGCT+AGG | 0.558541 | 8.2:-22659296 | None:intergenic |
GCCTTTCATTGCCACAGATG+AGG | 0.563244 | 8.2:+22661061 | MS.gene61286:CDS |
CCCATCATGGTAACGCACCT+CGG | 0.563559 | 8.2:-22659337 | None:intergenic |
GATTAGTAAATGGTTGAAAG+AGG | 0.563585 | 8.2:+22659524 | MS.gene61286:CDS |
AAACAAACAATGTCATGTAT+GGG | 0.563802 | 8.2:-22659582 | None:intergenic |
TTATGTAATAAGCAATTCAA+AGG | 0.566767 | 8.2:+22660306 | MS.gene61286:CDS |
ACGCACAAGACCAAATTATG+TGG | 0.574274 | 8.2:+22658882 | MS.gene61286:CDS |
ATAATATCAATGGGAATGAG+AGG | 0.575607 | 8.2:+22660236 | MS.gene61286:CDS |
CTGGACTCTACAGATTTCAT+GGG | 0.578606 | 8.2:+22661021 | MS.gene61286:intron |
AGTTTGTGGATTAGATGGAA+TGG | 0.581324 | 8.2:-22661484 | None:intergenic |
GCCTCTGTATGCCTCATCTG+TGG | 0.584277 | 8.2:-22661072 | None:intergenic |
TGCTTAGATCAAATCTGAGG+AGG | 0.587040 | 8.2:+22660777 | MS.gene61286:intron |
ATCCACAAACTGTTGAAATG+TGG | 0.588515 | 8.2:+22661496 | MS.gene61286:CDS |
GCGACGAGGAAATCTCTGTA+TGG | 0.591878 | 8.2:+22659412 | MS.gene61286:CDS |
GTGGAAAAGGAGAAGATGAA+GGG | 0.593089 | 8.2:+22659610 | MS.gene61286:CDS |
TGAAGGGTTAGAAGCAAACT+GGG | 0.594789 | 8.2:+22658942 | MS.gene61286:CDS |
AAAGTGAGTCAAATATTGAA+GGG | 0.601009 | 8.2:+22658926 | MS.gene61286:CDS |
ACCATACAAACGCATTTCGG+TGG | 0.602664 | 8.2:+22659470 | MS.gene61286:CDS |
AATACTCGTTTCCGGAACAA+TGG | 0.603556 | 8.2:-22659100 | None:intergenic |
TAATTGCTGCAGCTACCGTA+AGG | 0.611328 | 8.2:+22660849 | MS.gene61286:CDS |
CCTGTATAAAAGCACAAGAA+CGG | 0.617850 | 8.2:-22659671 | None:intergenic |
GGCTGATCAACATCCCCGAA+TGG | 0.620641 | 8.2:-22661645 | None:intergenic |
ACAAGAACGGTGATAAGTGG+AGG | 0.625049 | 8.2:-22659658 | None:intergenic |
AGCATGGTTGACAACTTGCA+AGG | 0.627667 | 8.2:+22659299 | MS.gene61286:CDS |
TGCAAGTGCAAATACTGTAA+GGG | 0.630487 | 8.2:+22659838 | MS.gene61286:CDS |
ATTTCATTCACCGATGATGG+AGG | 0.630618 | 8.2:-22659072 | None:intergenic |
AACCAGGTCGACGAGGTCGA+CGG | 0.633162 | 8.2:+22658968 | MS.gene61286:CDS |
TGCAGTAAGAACATAACCAA+TGG | 0.637831 | 8.2:-22659819 | None:intergenic |
AATTGCTTAGATCAAATCTG+AGG | 0.638264 | 8.2:+22660774 | MS.gene61286:intron |
AACGCATTTCGGTGGCAAAG+CGG | 0.641653 | 8.2:+22659478 | MS.gene61286:CDS |
CGAGGTGCGTTACCATGATG+GGG | 0.652213 | 8.2:+22659338 | MS.gene61286:CDS |
CTTGCAAGGAAATTGATGAA+GGG | 0.653849 | 8.2:+22659313 | MS.gene61286:CDS |
ACAAATGGATACGAAAAGTG+AGG | 0.660093 | 8.2:+22660279 | MS.gene61286:CDS |
CACACATACTGGCGTCAATG+TGG | 0.663750 | 8.2:+22660378 | MS.gene61286:CDS |
CTTATGTAGCTGTTGCGACG+AGG | 0.663870 | 8.2:+22659398 | MS.gene61286:CDS |
GGAAAAGGAGAAGATGAAGG+GGG | 0.669030 | 8.2:+22659612 | MS.gene61286:CDS |
CAAGAACGGTGATAAGTGGA+GGG | 0.669312 | 8.2:-22659657 | None:intergenic |
GCCACAGATGAGGCATACAG+AGG | 0.671197 | 8.2:+22661071 | MS.gene61286:CDS |
AGAGTGTTCTATACAACCGC+AGG | 0.671533 | 8.2:+22660404 | MS.gene61286:CDS |
TGCTTAATCGTATAGCTCCG+GGG | 0.678737 | 8.2:-22661596 | None:intergenic |
GGAAATTGATGAAGGGACCG+AGG | 0.685280 | 8.2:+22659320 | MS.gene61286:CDS |
GGACTTGAATGAGCCATTCG+GGG | 0.695242 | 8.2:+22661632 | MS.gene61286:CDS |
AAACTCCAAGCGCAACAGCG+GGG | 0.743032 | 8.2:+22659229 | MS.gene61286:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTGAAATTTTTTCTTTTTTT+GGG | - | chr8.2:22660735-22660754 | None:intergenic | 10.0% |
!!! | TTTTTATAATGTTTTATTTC+TGG | - | chr8.2:22659270-22659289 | None:intergenic | 10.0% |
!! | AAACTGAAAAAGATTTATTA+AGG | + | chr8.2:22660058-22660077 | MS.gene61286:CDS | 15.0% |
!!! | AATAATTTGTTATTTCTTCA+CGG | + | chr8.2:22660938-22660957 | MS.gene61286:intron | 15.0% |
!!! | AATTTAATTCACTTGTTTTA+AGG | + | chr8.2:22661370-22661389 | MS.gene61286:intron | 15.0% |
!!! | CTTGAAATTTTTTCTTTTTT+TGG | - | chr8.2:22660736-22660755 | None:intergenic | 15.0% |
!! | AATCAAATACATGATATTTG+TGG | + | chr8.2:22660157-22660176 | MS.gene61286:intron | 20.0% |
!! | ATCAAATACATGATATTTGT+GGG | + | chr8.2:22660158-22660177 | MS.gene61286:intron | 20.0% |
!! | GAATCCAAAATAATATCAAT+GGG | + | chr8.2:22660227-22660246 | MS.gene61286:CDS | 20.0% |
!! | TGGTAAAAAATATATTTGGT+TGG | - | chr8.2:22660484-22660503 | None:intergenic | 20.0% |
!! | TTATGTAATAAGCAATTCAA+AGG | + | chr8.2:22660306-22660325 | MS.gene61286:CDS | 20.0% |
!!! | ACTTTAGATTAAAAGAGTAT+CGG | + | chr8.2:22660539-22660558 | MS.gene61286:intron | 20.0% |
!!! | AGTTTACAAAATGATTTTGT+AGG | + | chr8.2:22660015-22660034 | MS.gene61286:intron | 20.0% |
!!! | ATAATTTGTTATTTCTTCAC+GGG | + | chr8.2:22660939-22660958 | MS.gene61286:intron | 20.0% |
!!! | CTTTTTCAACTATTTTGTTT+TGG | + | chr8.2:22660897-22660916 | MS.gene61286:intron | 20.0% |
! | AAAACATCCTGATTAGTAAA+TGG | + | chr8.2:22659514-22659533 | MS.gene61286:CDS | 25.0% |
! | AAACAAACAATGTCATGTAT+GGG | - | chr8.2:22659585-22659604 | None:intergenic | 25.0% |
! | AAAGATTGATGAGAAATTGA+AGG | + | chr8.2:22660195-22660214 | MS.gene61286:intron | 25.0% |
! | AAAGTGAGTCAAATATTGAA+GGG | + | chr8.2:22658926-22658945 | MS.gene61286:CDS | 25.0% |
! | AAGATTGATGAGAAATTGAA+GGG | + | chr8.2:22660196-22660215 | MS.gene61286:intron | 25.0% |
! | AATTAAGTTCAATGGAAAAG+TGG | - | chr8.2:22661321-22661340 | None:intergenic | 25.0% |
! | AGATTTGATCTAAGCAATTA+AGG | - | chr8.2:22660773-22660792 | None:intergenic | 25.0% |
! | ATGAATGCAATTAAGTTCAA+TGG | - | chr8.2:22661329-22661348 | None:intergenic | 25.0% |
! | CAAAAAGTTGAAGAAAGATA+TGG | + | chr8.2:22661551-22661570 | MS.gene61286:CDS | 25.0% |
! | CAATTATCTCCATTAACAAA+TGG | - | chr8.2:22661109-22661128 | None:intergenic | 25.0% |
! | GCAGTGGTAAAAAATATATT+TGG | - | chr8.2:22660488-22660507 | None:intergenic | 25.0% |
! | GGAATCCAAAATAATATCAA+TGG | + | chr8.2:22660226-22660245 | MS.gene61286:CDS | 25.0% |
! | GTTAATGGAGATAATTGAAT+CGG | + | chr8.2:22661112-22661131 | MS.gene61286:CDS | 25.0% |
! | TAAACAAACAATGTCATGTA+TGG | - | chr8.2:22659586-22659605 | None:intergenic | 25.0% |
! | TCACTTATTTCCACATAATT+TGG | - | chr8.2:22658895-22658914 | None:intergenic | 25.0% |
!! | AAAAATATATTTGGTTGGTG+CGG | - | chr8.2:22660479-22660498 | None:intergenic | 25.0% |
!! | AAAATGATTTTGTAGGTCAT+TGG | + | chr8.2:22660022-22660041 | MS.gene61286:intron | 25.0% |
!! | ATTTACTAATCAGGATGTTT+TGG | - | chr8.2:22659515-22659534 | None:intergenic | 25.0% |
!! | CATTCCCATTGATATTATTT+TGG | - | chr8.2:22660234-22660253 | None:intergenic | 25.0% |
!! | TAATCTAAAGTGTCATTACA+TGG | - | chr8.2:22660530-22660549 | None:intergenic | 25.0% |
!! | TATCATTGAATTGTTATTCC+TGG | + | chr8.2:22661002-22661021 | MS.gene61286:intron | 25.0% |
!! | TTTTCTTTTGCTTACATGAA+GGG | + | chr8.2:22659715-22659734 | MS.gene61286:intron | 25.0% |
!! | TTTTTCTTTTGCTTACATGA+AGG | + | chr8.2:22659714-22659733 | MS.gene61286:intron | 25.0% |
!!! | CAACTATTTTGTTTTGGTTA+TGG | + | chr8.2:22660903-22660922 | MS.gene61286:intron | 25.0% |
!!! | CTTTAGATTAAAAGAGTATC+GGG | + | chr8.2:22660540-22660559 | MS.gene61286:intron | 25.0% |
!!! | CTTTTCATTTTTATACTGCA+GGG | + | chr8.2:22659775-22659794 | MS.gene61286:intron | 25.0% |
!!! | GTTGAAAAAGTATCAACAAT+TGG | - | chr8.2:22660887-22660906 | None:intergenic | 25.0% |
!!! | TCTTTTCATTTTTATACTGC+AGG | + | chr8.2:22659774-22659793 | MS.gene61286:intron | 25.0% |
!!! | TGCATATCACATTTTGAAAA+TGG | - | chr8.2:22661206-22661225 | None:intergenic | 25.0% |
AAGTATCAACAATTGGAAAG+AGG | - | chr8.2:22660880-22660899 | None:intergenic | 30.0% | |
AATTGCTTAGATCAAATCTG+AGG | + | chr8.2:22660774-22660793 | MS.gene61286:intron | 30.0% | |
ACCTGAAATAGGTAATTTCT+GGG | + | chr8.2:22659011-22659030 | MS.gene61286:CDS | 30.0% | |
AGTTATGGTCATGAAAACAA+AGG | - | chr8.2:22659986-22660005 | None:intergenic | 30.0% | |
ATAAAAAAACCATCCTAGCA+TGG | + | chr8.2:22659283-22659302 | MS.gene61286:CDS | 30.0% | |
ATAATATCAATGGGAATGAG+AGG | + | chr8.2:22660236-22660255 | MS.gene61286:CDS | 30.0% | |
ATACAACATGCATGAGATAT+AGG | - | chr8.2:22661155-22661174 | None:intergenic | 30.0% | |
ATTAAGCAAAAGACTTCTAC+TGG | + | chr8.2:22661611-22661630 | MS.gene61286:CDS | 30.0% | |
CTTTCAACCATTTACTAATC+AGG | - | chr8.2:22659524-22659543 | None:intergenic | 30.0% | |
GAAAGTGAGTCAAATATTGA+AGG | + | chr8.2:22658925-22658944 | MS.gene61286:CDS | 30.0% | |
GATTAGTAAATGGTTGAAAG+AGG | + | chr8.2:22659524-22659543 | MS.gene61286:CDS | 30.0% | |
GCAAAAATATAACTTCAGTG+AGG | + | chr8.2:22661521-22661540 | MS.gene61286:CDS | 30.0% | |
TAAACTACTTCAGTGAGTTA+TGG | - | chr8.2:22660001-22660020 | None:intergenic | 30.0% | |
TCAACAAACAAGTCATAATC+TGG | + | chr8.2:22659185-22659204 | MS.gene61286:CDS | 30.0% | |
TTGAAATATCAGATGATGAC+CGG | - | chr8.2:22659931-22659950 | None:intergenic | 30.0% | |
! | AAATTACCTATTTCAGGTCT+TGG | - | chr8.2:22659009-22659028 | None:intergenic | 30.0% |
! | ACGAATTTGCCATTTGTTAA+TGG | + | chr8.2:22661097-22661116 | MS.gene61286:CDS | 30.0% |
!! | GACATTGTTTGTTTAGTTTG+TGG | + | chr8.2:22659591-22659610 | MS.gene61286:CDS | 30.0% |
!! | GTTTGTTTAGTTTGTGGAAA+AGG | + | chr8.2:22659597-22659616 | MS.gene61286:CDS | 30.0% |
!!! | GTATGCATTCATTTTTTCTG+TGG | + | chr8.2:22660108-22660127 | MS.gene61286:intron | 30.0% |
AAGAGGATGAACAAAAACGT+CGG | + | chr8.2:22659541-22659560 | MS.gene61286:CDS | 35.0% | |
AAGTTCAATGGAAAAGTGGA+AGG | - | chr8.2:22661317-22661336 | None:intergenic | 35.0% | |
ACAAATGGATACGAAAAGTG+AGG | + | chr8.2:22660279-22660298 | MS.gene61286:CDS | 35.0% | |
ACATATCTCTCTCTTCTACA+AGG | - | chr8.2:22661284-22661303 | None:intergenic | 35.0% | |
ACTTGCAAGGAAATTGATGA+AGG | + | chr8.2:22659312-22659331 | MS.gene61286:CDS | 35.0% | |
ATAGTGAGTGATAAATGCAG+TGG | - | chr8.2:22660504-22660523 | None:intergenic | 35.0% | |
ATCCACAAACTGTTGAAATG+TGG | + | chr8.2:22661496-22661515 | MS.gene61286:CDS | 35.0% | |
ATGATAACAGACACACATAC+TGG | + | chr8.2:22660367-22660386 | MS.gene61286:CDS | 35.0% | |
CTTGCAAGGAAATTGATGAA+GGG | + | chr8.2:22659313-22659332 | MS.gene61286:CDS | 35.0% | |
CTTGTTTCGTTCATTGATGA+TGG | - | chr8.2:22659159-22659178 | None:intergenic | 35.0% | |
GACCTGAAATAGGTAATTTC+TGG | + | chr8.2:22659010-22659029 | MS.gene61286:CDS | 35.0% | |
GAGAAATTGAAGGGATCAAT+CGG | + | chr8.2:22660205-22660224 | MS.gene61286:CDS | 35.0% | |
GCATACCTCTTTACAACTTA+CGG | - | chr8.2:22660094-22660113 | None:intergenic | 35.0% | |
TATGGTCATGAAAACAAAGG+AGG | - | chr8.2:22659983-22660002 | None:intergenic | 35.0% | |
TCCCAGAAATTACCTATTTC+AGG | - | chr8.2:22659015-22659034 | None:intergenic | 35.0% | |
TGAAATAGCTACCATTGTTC+CGG | + | chr8.2:22659089-22659108 | MS.gene61286:CDS | 35.0% | |
TGCAAGTGCAAATACTGTAA+GGG | + | chr8.2:22659838-22659857 | MS.gene61286:CDS | 35.0% | |
TGCAGTAAGAACATAACCAA+TGG | - | chr8.2:22659822-22659841 | None:intergenic | 35.0% | |
TTCCACATTTCAACAGTTTG+TGG | - | chr8.2:22661501-22661520 | None:intergenic | 35.0% | |
TTCGAAGTCTTGAAGTTGAA+AGG | + | chr8.2:22661457-22661476 | MS.gene61286:CDS | 35.0% | |
TTGAAAATTCGACCGGTTAT+CGG | - | chr8.2:22659369-22659388 | None:intergenic | 35.0% | |
TTGTTCCGTAAGTTGTAAAG+AGG | + | chr8.2:22660086-22660105 | MS.gene61286:CDS | 35.0% | |
TTTGCTTAATCGTATAGCTC+CGG | - | chr8.2:22661601-22661620 | None:intergenic | 35.0% | |
! | ATAACCGGTCGAATTTTCAA+TGG | + | chr8.2:22659369-22659388 | MS.gene61286:CDS | 35.0% |
! | CACTTTTCGTATCCATTTGT+TGG | - | chr8.2:22660279-22660298 | None:intergenic | 35.0% |
! | CCTGTATAAAAGCACAAGAA+CGG | - | chr8.2:22659674-22659693 | None:intergenic | 35.0% |
! | TATAACCTTTTGATGTTCCC+CGG | + | chr8.2:22661579-22661598 | MS.gene61286:CDS | 35.0% |
!! | AATTAAGAAGTGCTTACCTG+CGG | - | chr8.2:22660423-22660442 | None:intergenic | 35.0% |
!! | AGTTTGTGGATTAGATGGAA+TGG | - | chr8.2:22661487-22661506 | None:intergenic | 35.0% |
!! | ATGTTGATGGAAGAAGCTTT+TGG | + | chr8.2:22660343-22660362 | MS.gene61286:CDS | 35.0% |
!! | TACTAATCAGGATGTTTTGG+AGG | - | chr8.2:22659512-22659531 | None:intergenic | 35.0% |
!! | TCAACAGTTTGTGGATTAGA+TGG | - | chr8.2:22661492-22661511 | None:intergenic | 35.0% |
!! | TGTTGATGGAAGAAGCTTTT+GGG | + | chr8.2:22660344-22660363 | MS.gene61286:CDS | 35.0% |
!! | TTTTCGTATCCATTTGTTGG+AGG | - | chr8.2:22660276-22660295 | None:intergenic | 35.0% |
AACTGAAACACCTCCATCAT+CGG | + | chr8.2:22659062-22659081 | MS.gene61286:CDS | 40.0% | |
AATACTCGTTTCCGGAACAA+TGG | - | chr8.2:22659103-22659122 | None:intergenic | 40.0% | |
ACGCACAAGACCAAATTATG+TGG | + | chr8.2:22658882-22658901 | MS.gene61286:CDS | 40.0% | |
AGAGGATGAACAAAAACGTC+GGG | + | chr8.2:22659542-22659561 | MS.gene61286:CDS | 40.0% | |
CTGCAAGTGCAAATACTGTA+AGG | + | chr8.2:22659837-22659856 | MS.gene61286:CDS | 40.0% | |
CTGGACTCTACAGATTTCAT+GGG | + | chr8.2:22661021-22661040 | MS.gene61286:intron | 40.0% | |
GCAACCATACAAACGCATTT+CGG | + | chr8.2:22659467-22659486 | MS.gene61286:CDS | 40.0% | |
GTGGAAAAGGAGAAGATGAA+GGG | + | chr8.2:22659610-22659629 | MS.gene61286:CDS | 40.0% | |
TCATGAAAACAAAGGAGGTG+AGG | - | chr8.2:22659978-22659997 | None:intergenic | 40.0% | |
TCCATTGGCAAACTTTGTTC+CGG | - | chr8.2:22659129-22659148 | None:intergenic | 40.0% | |
TCCGGAAACGAGTATTAATC+CGG | + | chr8.2:22659107-22659126 | MS.gene61286:CDS | 40.0% | |
TCCGGATTAATACTCGTTTC+CGG | - | chr8.2:22659111-22659130 | None:intergenic | 40.0% | |
TGAAGGGTTAGAAGCAAACT+GGG | + | chr8.2:22658942-22658961 | MS.gene61286:CDS | 40.0% | |
TGCTTAGATCAAATCTGAGG+AGG | + | chr8.2:22660777-22660796 | MS.gene61286:intron | 40.0% | |
TGGAAAAGGAGAAGATGAAG+GGG | + | chr8.2:22659611-22659630 | MS.gene61286:CDS | 40.0% | |
TGGAAAGAGGACATACCTTA+CGG | - | chr8.2:22660867-22660886 | None:intergenic | 40.0% | |
TGTGGAAAAGGAGAAGATGA+AGG | + | chr8.2:22659609-22659628 | MS.gene61286:CDS | 40.0% | |
TTGAAGGGTTAGAAGCAAAC+TGG | + | chr8.2:22658941-22658960 | MS.gene61286:CDS | 40.0% | |
TTGCTTAATCGTATAGCTCC+GGG | - | chr8.2:22661600-22661619 | None:intergenic | 40.0% | |
! | ACTTACACTGCTTGTTGCAT+TGG | - | chr8.2:22659903-22659922 | None:intergenic | 40.0% |
! | ATTTCATTCACCGATGATGG+AGG | - | chr8.2:22659075-22659094 | None:intergenic | 40.0% |
! | CAAGCAGTGTAAGTTTTCTC+CGG | + | chr8.2:22659909-22659928 | MS.gene61286:intron | 40.0% |
! | CCGTTCTTGTGCTTTTATAC+AGG | + | chr8.2:22659671-22659690 | MS.gene61286:CDS | 40.0% |
! | GCTATTTCATTCACCGATGA+TGG | - | chr8.2:22659078-22659097 | None:intergenic | 40.0% |
! | TATACTGCAGGGTTTTTCTC+AGG | + | chr8.2:22659786-22659805 | MS.gene61286:intron | 40.0% |
!! | ATGGGAATGAGAGGTATTCT+TGG | + | chr8.2:22660245-22660264 | MS.gene61286:CDS | 40.0% |
!! | CTCTTCTACAAGGAGTGTTA+TGG | - | chr8.2:22661274-22661293 | None:intergenic | 40.0% |
!! | GATGATGGAACTGTTTCCAT+TGG | - | chr8.2:22659144-22659163 | None:intergenic | 40.0% |
!!! | AATCAGGATGTTTTGGAGGA+AGG | - | chr8.2:22659508-22659527 | None:intergenic | 40.0% |
!!! | TTATCGGTTTTTCCCCATCA+TGG | - | chr8.2:22659353-22659372 | None:intergenic | 40.0% |
ACAAGAACGGTGATAAGTGG+AGG | - | chr8.2:22659661-22659680 | None:intergenic | 45.0% | |
ACCATACAAACGCATTTCGG+TGG | + | chr8.2:22659470-22659489 | MS.gene61286:CDS | 45.0% | |
AGCACAAGAACGGTGATAAG+TGG | - | chr8.2:22659664-22659683 | None:intergenic | 45.0% | |
AGCATGGTTGACAACTTGCA+AGG | + | chr8.2:22659299-22659318 | MS.gene61286:CDS | 45.0% | |
AGTTGTCAACCATGCTAGGA+TGG | - | chr8.2:22659295-22659314 | None:intergenic | 45.0% | |
CAAGAACGGTGATAAGTGGA+GGG | - | chr8.2:22659660-22659679 | None:intergenic | 45.0% | |
CCATGAAATCTGTAGAGTCC+AGG | - | chr8.2:22661023-22661042 | None:intergenic | 45.0% | |
CCTGGACTCTACAGATTTCA+TGG | + | chr8.2:22661020-22661039 | MS.gene61286:intron | 45.0% | |
CGTAGACCAAGACCTGAAAT+AGG | + | chr8.2:22659000-22659019 | MS.gene61286:CDS | 45.0% | |
CTCAGGAAAACGACAACCAT+TGG | + | chr8.2:22659803-22659822 | MS.gene61286:CDS | 45.0% | |
CTGGACTTGAATGAGCCATT+CGG | + | chr8.2:22661630-22661649 | MS.gene61286:CDS | 45.0% | |
GAAGCAAACTGGGAAAAACC+AGG | + | chr8.2:22658952-22658971 | MS.gene61286:CDS | 45.0% | |
GATGGGGAAAAACCGATAAC+CGG | + | chr8.2:22659354-22659373 | MS.gene61286:CDS | 45.0% | |
GGAAAAGGAGAAGATGAAGG+GGG | + | chr8.2:22659612-22659631 | MS.gene61286:CDS | 45.0% | |
GGCTCCATTGAAAATTCGAC+CGG | - | chr8.2:22659376-22659395 | None:intergenic | 45.0% | |
GTATCGGGTGTCTAACAAAG+TGG | + | chr8.2:22660555-22660574 | MS.gene61286:intron | 45.0% | |
GTCGCAACAGCTACATAAGA+TGG | - | chr8.2:22659397-22659416 | None:intergenic | 45.0% | |
TAATTGCTGCAGCTACCGTA+AGG | + | chr8.2:22660849-22660868 | MS.gene61286:CDS | 45.0% | |
TCCGGAACAAAGTTTGCCAA+TGG | + | chr8.2:22659125-22659144 | MS.gene61286:CDS | 45.0% | |
TGAAAACAAAGGAGGTGAGG+TGG | - | chr8.2:22659975-22659994 | None:intergenic | 45.0% | |
TGCAAGTTGTCAACCATGCT+AGG | - | chr8.2:22659299-22659318 | None:intergenic | 45.0% | |
TGCTTAATCGTATAGCTCCG+GGG | - | chr8.2:22661599-22661618 | None:intergenic | 45.0% | |
TGGACTTGAATGAGCCATTC+GGG | + | chr8.2:22661631-22661650 | MS.gene61286:CDS | 45.0% | |
TTGGAGAGTCCTCCAACAAA+TGG | + | chr8.2:22660264-22660283 | MS.gene61286:CDS | 45.0% | |
! | AGAGTGTTCTATACAACCGC+AGG | + | chr8.2:22660404-22660423 | MS.gene61286:CDS | 45.0% |
! | CTGTAAGGGTGATGATGAAG+AGG | + | chr8.2:22659852-22659871 | MS.gene61286:CDS | 45.0% |
! | TACACTGCTTGTTGCATTGG+CGG | - | chr8.2:22659900-22659919 | None:intergenic | 45.0% |
AACGCATTTCGGTGGCAAAG+CGG | + | chr8.2:22659478-22659497 | MS.gene61286:CDS | 50.0% | |
AGAAACTCCAAGCGCAACAG+CGG | + | chr8.2:22659227-22659246 | MS.gene61286:CDS | 50.0% | |
CACACATACTGGCGTCAATG+TGG | + | chr8.2:22660378-22660397 | MS.gene61286:CDS | 50.0% | |
CTTATGTAGCTGTTGCGACG+AGG | + | chr8.2:22659398-22659417 | MS.gene61286:CDS | 50.0% | |
GCCACCGAAATGCGTTTGTA+TGG | - | chr8.2:22659474-22659493 | None:intergenic | 50.0% | |
GCCTCATCTGTGGCAATGAA+AGG | - | chr8.2:22661065-22661084 | None:intergenic | 50.0% | |
GCCTTTCATTGCCACAGATG+AGG | + | chr8.2:22661061-22661080 | MS.gene61286:CDS | 50.0% | |
GCGACGAGGAAATCTCTGTA+TGG | + | chr8.2:22659412-22659431 | MS.gene61286:CDS | 50.0% | |
GGAAATTGATGAAGGGACCG+AGG | + | chr8.2:22659320-22659339 | MS.gene61286:CDS | 50.0% | |
GGACTTGAATGAGCCATTCG+GGG | + | chr8.2:22661632-22661651 | MS.gene61286:CDS | 50.0% | |
TAGCTCCGGGGAACATCAAA+AGG | - | chr8.2:22661587-22661606 | None:intergenic | 50.0% | |
TCGGGTGTCTAACAAAGTGG+AGG | + | chr8.2:22660558-22660577 | MS.gene61286:intron | 50.0% | |
TGCAGCTGCTTGCATGTTGA+TGG | + | chr8.2:22660330-22660349 | MS.gene61286:CDS | 50.0% | |
TGGCGGCACATGATGTCTAA+AGG | - | chr8.2:22659883-22659902 | None:intergenic | 50.0% | |
AAACTCCAAGCGCAACAGCG+GGG | + | chr8.2:22659229-22659248 | MS.gene61286:CDS | 55.0% | |
ACCGAGGTGCGTTACCATGA+TGG | + | chr8.2:22659336-22659355 | MS.gene61286:CDS | 55.0% | |
AGGAGGTGAGGTGGATGAGT+AGG | - | chr8.2:22659966-22659985 | None:intergenic | 55.0% | |
CCGAGGTGCGTTACCATGAT+GGG | + | chr8.2:22659337-22659356 | MS.gene61286:CDS | 55.0% | |
CGAGGTGCGTTACCATGATG+GGG | + | chr8.2:22659338-22659357 | MS.gene61286:CDS | 55.0% | |
GAAACTCCAAGCGCAACAGC+GGG | + | chr8.2:22659228-22659247 | MS.gene61286:CDS | 55.0% | |
GCCACAGATGAGGCATACAG+AGG | + | chr8.2:22661071-22661090 | MS.gene61286:CDS | 55.0% | |
GCCTCTGTATGCCTCATCTG+TGG | - | chr8.2:22661075-22661094 | None:intergenic | 55.0% | |
GGAGGTGAGGTGGATGAGTA+GGG | - | chr8.2:22659965-22659984 | None:intergenic | 55.0% | |
GGCTGATCAACATCCCCGAA+TGG | - | chr8.2:22661648-22661667 | None:intergenic | 55.0% | |
TGGGAAAAACCAGGTCGACG+AGG | + | chr8.2:22658961-22658980 | MS.gene61286:CDS | 55.0% | |
! | CCCATCATGGTAACGCACCT+CGG | - | chr8.2:22659340-22659359 | None:intergenic | 55.0% |
AACCAGGTCGACGAGGTCGA+CGG | + | chr8.2:22658968-22658987 | MS.gene61286:CDS | 60.0% | |
GAAGTCCCCGCTGTTGCGCT+TGG | - | chr8.2:22659237-22659256 | None:intergenic | 65.0% | |
GACCGTCGACCTCGTCGACC+TGG | - | chr8.2:22658973-22658992 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 22658859 | 22661683 | 22658859 | ID=MS.gene61286 |
chr8.2 | mRNA | 22658859 | 22661683 | 22658859 | ID=MS.gene61286.t1;Parent=MS.gene61286 |
chr8.2 | exon | 22658859 | 22659692 | 22658859 | ID=MS.gene61286.t1.exon1;Parent=MS.gene61286.t1 |
chr8.2 | CDS | 22658859 | 22659692 | 22658859 | ID=cds.MS.gene61286.t1;Parent=MS.gene61286.t1 |
chr8.2 | exon | 22659796 | 22659916 | 22659796 | ID=MS.gene61286.t1.exon2;Parent=MS.gene61286.t1 |
chr8.2 | CDS | 22659796 | 22659916 | 22659796 | ID=cds.MS.gene61286.t1;Parent=MS.gene61286.t1 |
chr8.2 | exon | 22660037 | 22660107 | 22660037 | ID=MS.gene61286.t1.exon3;Parent=MS.gene61286.t1 |
chr8.2 | CDS | 22660037 | 22660107 | 22660037 | ID=cds.MS.gene61286.t1;Parent=MS.gene61286.t1 |
chr8.2 | exon | 22660199 | 22660425 | 22660199 | ID=MS.gene61286.t1.exon4;Parent=MS.gene61286.t1 |
chr8.2 | CDS | 22660199 | 22660425 | 22660199 | ID=cds.MS.gene61286.t1;Parent=MS.gene61286.t1 |
chr8.2 | exon | 22660784 | 22660870 | 22660784 | ID=MS.gene61286.t1.exon5;Parent=MS.gene61286.t1 |
chr8.2 | CDS | 22660784 | 22660870 | 22660784 | ID=cds.MS.gene61286.t1;Parent=MS.gene61286.t1 |
chr8.2 | exon | 22661034 | 22661133 | 22661034 | ID=MS.gene61286.t1.exon6;Parent=MS.gene61286.t1 |
chr8.2 | CDS | 22661034 | 22661133 | 22661034 | ID=cds.MS.gene61286.t1;Parent=MS.gene61286.t1 |
chr8.2 | exon | 22661453 | 22661683 | 22661453 | ID=MS.gene61286.t1.exon7;Parent=MS.gene61286.t1 |
chr8.2 | CDS | 22661453 | 22661683 | 22661453 | ID=cds.MS.gene61286.t1;Parent=MS.gene61286.t1 |
Gene Sequence |
Protein sequence |