AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61297

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61297.t1 MTR_4g100550 94.286 280 8 3 1 272 1 280 0.0 530
MS.gene61297.t1 MTR_5g013010 71.477 298 52 9 2 271 1 293 1.68e-135 384
MS.gene61297.t1 MTR_8g006705 57.843 306 82 12 3 265 1 302 2.53e-88 265
MS.gene61297.t1 MTR_7g093430 65.054 186 55 2 51 227 89 273 9.95e-73 225
MS.gene61297.t1 MTR_1g054285 60.000 205 64 5 50 242 82 280 3.35e-69 216
MS.gene61297.t1 MTR_2g061030 74.000 150 35 2 92 238 176 324 1.29e-67 213
MS.gene61297.t1 MTR_5g013010 66.492 191 32 8 2 164 1 187 1.76e-65 203
MS.gene61297.t1 MTR_4g097600 75.573 131 31 1 96 226 110 239 7.45e-63 199
MS.gene61297.t1 MTR_5g014890 71.774 124 34 1 104 227 114 236 2.91e-58 187
MS.gene61297.t1 MTR_1g017090 61.151 139 44 3 112 241 129 266 2.88e-52 172
MS.gene61297.t1 MTR_4g084750 62.097 124 42 1 107 225 59 182 2.43e-46 154
MS.gene61297.t1 MTR_2g038625 45.714 175 95 0 69 243 38 212 1.38e-42 145
MS.gene61297.t1 MTR_2g038580 45.714 175 95 0 69 243 38 212 1.38e-42 145
MS.gene61297.t1 MTR_3g103590 50.888 169 76 3 104 272 136 297 5.42e-41 143
MS.gene61297.t1 MTR_4g126900 58.333 120 47 1 115 231 90 209 1.21e-38 135
MS.gene61297.t1 MTR_7g010020 39.241 158 87 2 54 202 16 173 2.65e-23 96.3
MS.gene61297.t1 MTR_8g468210 40.496 121 69 1 82 199 43 163 3.87e-21 90.5
MS.gene61297.t1 MTR_4g107650 47.748 111 51 1 95 198 77 187 1.63e-20 89.7
MS.gene61297.t1 MTR_6g011610 48.000 100 51 1 102 200 84 183 2.52e-20 88.2
MS.gene61297.t1 MTR_6g007647 48.454 97 43 1 109 198 29 125 2.85e-20 87.8
MS.gene61297.t1 MTR_3g080100 46.667 105 49 1 103 200 10 114 3.10e-20 86.7
MS.gene61297.t1 MTR_6g007647 42.149 121 69 1 109 229 63 182 4.17e-20 87.8
MS.gene61297.t1 MTR_6g011610 48.000 100 51 1 102 200 65 164 4.76e-20 87.0
MS.gene61297.t1 MTR_3g080100 46.667 105 49 1 103 200 49 153 5.22e-20 87.0
MS.gene61297.t1 MTR_8g089895 50.505 99 42 1 109 200 50 148 2.06e-19 86.3
MS.gene61297.t1 MTR_5g039000 45.000 100 54 1 101 200 66 164 7.55e-19 84.3
MS.gene61297.t1 MTR_5g038280 45.690 116 55 2 97 205 71 185 8.41e-19 84.7
MS.gene61297.t1 MTR_1g061660 38.971 136 66 3 113 239 59 186 1.71e-18 82.4
MS.gene61297.t1 MTR_7g103340 45.455 88 48 0 113 200 63 150 2.60e-18 82.0
MS.gene61297.t1 MTR_3g086790 41.406 128 67 2 105 224 52 179 3.65e-18 82.8
MS.gene61297.t1 MTR_8g469430 46.809 94 43 1 113 199 89 182 3.76e-17 79.7
MS.gene61297.t1 MTR_3g092150 44.086 93 45 1 116 201 41 133 1.08e-13 69.3
MS.gene61297.t1 MTR_5g029320 33.333 141 93 1 58 198 38 177 1.23e-13 71.2
MS.gene61297.t1 MTR_8g026960 42.683 82 47 0 117 198 38 119 3.09e-13 68.2
MS.gene61297.t1 MTR_5g019650 42.342 111 62 1 99 207 39 149 4.83e-13 67.0
MS.gene61297.t1 MTR_5g019680 42.202 109 58 1 99 207 39 142 6.17e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61297.t1 AT4G16780 61.034 290 84 6 2 271 1 281 3.74e-102 299
MS.gene61297.t1 AT5G47370 60.068 293 57 12 2 260 1 267 5.14e-96 284
MS.gene61297.t1 AT4G17460 57.383 298 80 11 2 271 1 279 3.24e-95 281
MS.gene61297.t1 AT3G60390 63.750 240 59 7 49 265 75 309 1.76e-88 266
MS.gene61297.t1 AT2G44910 61.277 235 54 6 18 227 55 277 1.33e-82 251
MS.gene61297.t1 AT5G06710 59.091 198 63 4 73 255 135 329 1.93e-68 215
MS.gene61297.t1 AT4G37790 76.423 123 28 1 104 226 117 238 2.39e-61 195
MS.gene61297.t1 AT2G22800 71.875 128 32 2 102 226 99 225 2.85e-58 187
MS.gene61297.t1 AT2G01430 52.326 172 65 4 74 234 95 260 5.50e-46 155
MS.gene61297.t1 AT1G70920 57.480 127 46 1 101 227 27 145 5.02e-37 129
MS.gene61297.t1 AT1G70920 57.480 127 43 2 104 227 57 175 5.50e-37 130
MS.gene61297.t1 AT5G06710 56.075 107 32 2 73 164 135 241 3.01e-27 107
MS.gene61297.t1 AT1G69780 44.444 126 65 1 80 200 47 172 1.26e-23 97.4
MS.gene61297.t1 AT2G01430 50.505 99 38 2 74 164 95 190 8.16e-21 88.2
MS.gene61297.t1 AT5G65310 34.759 187 103 5 91 270 51 225 6.20e-20 87.8
MS.gene61297.t1 AT5G65310 34.759 187 103 5 91 270 33 207 7.53e-20 87.4
MS.gene61297.t1 AT1G26960 46.875 96 51 0 105 200 63 158 7.97e-20 86.7
MS.gene61297.t1 AT3G01470 47.312 93 42 1 113 198 68 160 5.69e-18 81.6
MS.gene61297.t1 AT3G01220 42.857 119 60 4 91 202 63 180 1.88e-17 80.5
MS.gene61297.t1 AT5G15150 38.710 124 68 2 78 200 86 202 2.68e-17 80.5
MS.gene61297.t1 AT5G03790 46.067 89 48 0 113 201 77 165 2.89e-17 79.0
MS.gene61297.t1 AT4G40060 45.361 97 46 1 111 200 57 153 1.02e-16 78.6
MS.gene61297.t1 AT2G22430 46.875 96 47 1 111 202 60 155 2.09e-16 77.8
MS.gene61297.t1 AT1G27045 38.849 139 66 3 76 201 31 163 2.99e-16 76.6
MS.gene61297.t1 AT1G27045 43.119 109 50 2 76 178 31 133 4.09e-16 75.9
MS.gene61297.t1 AT1G27045 57.576 66 28 0 113 178 17 82 4.26e-16 74.7
MS.gene61297.t1 AT1G27045 57.576 66 28 0 113 178 25 90 4.40e-16 74.7
MS.gene61297.t1 AT1G27045 57.576 66 28 0 113 178 25 90 4.40e-16 74.7
MS.gene61297.t1 AT2G46680 36.508 126 71 1 116 241 35 151 7.02e-16 75.9
MS.gene61297.t1 AT2G46680 36.508 126 73 1 116 241 35 153 8.38e-16 75.5
MS.gene61297.t1 AT5G03790 43.956 91 51 0 113 203 77 167 1.31e-14 70.9
MS.gene61297.t1 AT2G36610 38.776 98 52 1 112 201 70 167 4.49e-14 69.3
MS.gene61297.t1 AT4G36740 37.624 101 63 0 99 199 41 141 1.49e-13 68.6
MS.gene61297.t1 AT4G36740 37.624 101 63 0 99 199 42 142 1.50e-13 68.6
MS.gene61297.t1 AT3G61890 42.169 83 48 0 116 198 33 115 3.75e-13 67.8
MS.gene61297.t1 AT2G18550 36.885 122 74 1 113 231 61 182 7.63e-13 66.6
MS.gene61297.t1 AT5G53980 43.678 87 49 0 113 199 11 97 2.45e-11 61.2

Find 69 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGATTAATTACGGGATTA+AGG 0.204975 8.2:-22515426 None:intergenic
CAAACCTAGCTCTTCTGTTT+TGG 0.228150 8.2:-22515592 None:intergenic
AAAATCTAACGGAGGAAAAT+AGG 0.298194 8.2:+22515746 MS.gene61297:CDS
CCCCTGCTTCTTCTTCCTCT+TGG 0.308178 8.2:-22515219 None:intergenic
CTGCTGCTCCAGTCACAAAT+AGG 0.366833 8.2:+22515974 MS.gene61297:CDS
CATCCTCGGGCTGTGCCTAT+AGG 0.371086 8.2:+22515940 MS.gene61297:CDS
TCCATCCAAACCTTCACTTC+AGG 0.379090 8.2:+22514911 MS.gene61297:CDS
TAGATTAATTACGGGATTAA+GGG 0.388703 8.2:-22515425 None:intergenic
ATCTAACCGTCACCATTCTA+TGG 0.389555 8.2:+22515909 MS.gene61297:CDS
GCACAGCCCGAGGATGGGCT+TGG 0.401813 8.2:-22515933 None:intergenic
ACATAAAAGCTTTATGATGA+TGG 0.403801 8.2:+22514814 None:intergenic
TTTCTTCAAGAATAGCTGAT+TGG 0.405030 8.2:-22515384 None:intergenic
AGCACAGTTTCAAGTGTTAG+TGG 0.413647 8.2:+22515256 MS.gene61297:CDS
GCAGAAGCCCATGGGCCTAT+AGG 0.413881 8.2:-22515955 None:intergenic
CTTTATGATGATGGTTGAAA+AGG 0.413968 8.2:+22514823 None:intergenic
ACACTTGAAACTGTGCTGTT+TGG 0.414647 8.2:-22515250 None:intergenic
CACAGCCCGAGGATGGGCTT+GGG 0.426678 8.2:-22515932 None:intergenic
TACGAGGAATCGACGTGAAT+CGG 0.436608 8.2:+22515173 MS.gene61297:CDS
GCATCAACACAAGCATTAGA+TGG 0.449100 8.2:-22515886 None:intergenic
TGGCATTCAATAGCTGTAGA+TGG 0.450684 8.2:-22515199 None:intergenic
AACCAGACTTCTACTTGTCT+TGG 0.452242 8.2:-22515569 None:intergenic
CTATGGCCCAAGCCCATCCT+CGG 0.455411 8.2:+22515926 MS.gene61297:CDS
GCATACCTGAAGTGAAGGTT+TGG 0.458056 8.2:-22514916 None:intergenic
GGCTGTGCCTATAGGCCCAT+GGG 0.462021 8.2:+22515948 MS.gene61297:CDS
TAAAACGCCGTGATCATTGA+CGG 0.467131 8.2:-22516011 None:intergenic
GGGCTGTGCCTATAGGCCCA+TGG 0.472141 8.2:+22515947 MS.gene61297:CDS
TCCTCGTACAGATCGAAACT+TGG 0.477132 8.2:+22515120 MS.gene61297:intron
TCATTTGCATGTAAAATTGT+GGG 0.480628 8.2:-22515813 None:intergenic
TTGGCACTTGCAAAGCAACT+TGG 0.482027 8.2:+22515539 MS.gene61297:CDS
GGGCACATAGTAAGAGTAGT+TGG 0.484138 8.2:-22515841 None:intergenic
CTATAGGCACAGCCCGAGGA+TGG 0.486518 8.2:-22515939 None:intergenic
GTCCAAGACAAGTAGAAGTC+TGG 0.488744 8.2:+22515567 MS.gene61297:CDS
TGCCAAGAGGAAGAAGAAGC+AGG 0.500256 8.2:+22515217 MS.gene61297:CDS
GATCATGACGTGGAAAATAG+AGG 0.505863 8.2:+22515301 MS.gene61297:CDS
ATGGTTGAAAAGGAAGACTT+GGG 0.522362 8.2:+22514833 MS.gene61297:CDS
TTGATTGTGAAGTGTTGAAA+AGG 0.523538 8.2:+22515716 MS.gene61297:CDS
GATGGGCTTGGGCCATAGAA+TGG 0.526314 8.2:-22515921 None:intergenic
GTGAAGGTTTGGATGGAAGA+TGG 0.529221 8.2:-22514905 None:intergenic
ACCTGAAGTGAAGGTTTGGA+TGG 0.537166 8.2:-22514912 None:intergenic
TATAGGCACAGCCCGAGGAT+GGG 0.537378 8.2:-22515938 None:intergenic
TATGGCCCAAGCCCATCCTC+GGG 0.537951 8.2:+22515927 MS.gene61297:CDS
GTCATTTGCATGTAAAATTG+TGG 0.542757 8.2:-22515814 None:intergenic
AAGAAGACGCTGAAACTGCT+AGG 0.546613 8.2:+22515338 MS.gene61297:CDS
ACTGGAGCAGCAGAAGCCCA+TGG 0.547767 8.2:-22515964 None:intergenic
GATGGTTGAAAAGGAAGACT+TGG 0.551331 8.2:+22514832 MS.gene61297:CDS
GCCAAGAGGAAGAAGAAGCA+GGG 0.554990 8.2:+22515218 MS.gene61297:CDS
GAAACATGCAGAGGAGAGAG+TGG 0.568617 8.2:+22515142 MS.gene61297:CDS
TCAAACATCCTATTTGTGAC+TGG 0.572768 8.2:-22515982 None:intergenic
GGTTCCAAAACAGAAGAGCT+AGG 0.575953 8.2:+22515588 MS.gene61297:CDS
ACAGCCACACGTTCACAAGA+AGG 0.580372 8.2:-22515862 None:intergenic
CTGGAGCAGCAGAAGCCCAT+GGG 0.581463 8.2:-22515963 None:intergenic
AAAATGCATACCTGAAGTGA+AGG 0.585786 8.2:-22514921 None:intergenic
CACATAGTAAGAGTAGTTGG+TGG 0.588373 8.2:-22515838 None:intergenic
CATTTGCATGTAAAATTGTG+GGG 0.595232 8.2:-22515812 None:intergenic
CAGCCACACGTTCACAAGAA+GGG 0.595325 8.2:-22515861 None:intergenic
GGAAAATAGGAGACTACAGA+AGG 0.611602 8.2:+22515759 MS.gene61297:CDS
CTTGGGCCATAGAATGGTGA+CGG 0.617650 8.2:-22515915 None:intergenic
TGGATGGAAGATGGTTTGTG+AGG 0.618691 8.2:-22514896 None:intergenic
CCAAGAGGAAGAAGAAGCAG+GGG 0.620587 8.2:+22515219 MS.gene61297:CDS
GTGCCCTTCTTGTGAACGTG+TGG 0.623014 8.2:+22515858 MS.gene61297:CDS
AAGGTGCTGTGAAAATCTAA+CGG 0.636807 8.2:+22515735 MS.gene61297:CDS
TACAGCTATTGAATGCCAAG+AGG 0.669451 8.2:+22515204 MS.gene61297:CDS
GGGCCTATAGGCACAGCCCG+AGG 0.674672 8.2:-22515943 None:intergenic
CGAAACTTGGAAACATGCAG+AGG 0.684060 8.2:+22515133 MS.gene61297:CDS
GATTCACGTCGATTCCTCGT+AGG 0.688742 8.2:-22515171 None:intergenic
GACGAAGCTGAAGCAAACAG+AGG 0.718082 8.2:+22515693 MS.gene61297:CDS
GTGCTGTGAAAATCTAACGG+AGG 0.721195 8.2:+22515738 MS.gene61297:CDS
GAGAGAAGAAGATCATGACG+TGG 0.729981 8.2:+22515291 MS.gene61297:CDS
GAGAGTGGAAAATACCTACG+AGG 0.764552 8.2:+22515157 MS.gene61297:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAATAAAATAATTA+AGG - chr8.2:22515470-22515489 None:intergenic 0.0%
!!! GATTTGAAATTATTTATTAT+AGG + chr8.2:22515671-22515690 MS.gene61297:intron 10.0%
!!! TGTTTATTTTTTTACTAATT+TGG + chr8.2:22515490-22515509 MS.gene61297:intron 10.0%
!! GTTGAATTAAAAACTTTAAT+GGG - chr8.2:22515071-22515090 None:intergenic 15.0%
!! TGTTGAATTAAAAACTTTAA+TGG - chr8.2:22515072-22515091 None:intergenic 15.0%
!! GTATTGAGATAGATTAATTA+CGG - chr8.2:22515437-22515456 None:intergenic 20.0%
!! TATTGAGATAGATTAATTAC+GGG - chr8.2:22515436-22515455 None:intergenic 20.0%
!!! AAATAATTAAGGAAGTTGAT+TGG - chr8.2:22515459-22515478 None:intergenic 20.0%
!!! ACAAGTATTTTTTTAGATCA+TGG + chr8.2:22514966-22514985 MS.gene61297:intron 20.0%
! ATAGATTAATTACGGGATTA+AGG - chr8.2:22515429-22515448 None:intergenic 25.0%
! GATCTAAAAAAATACTTGTG+TGG - chr8.2:22514965-22514984 None:intergenic 25.0%
! TAGATTAATTACGGGATTAA+GGG - chr8.2:22515428-22515447 None:intergenic 25.0%
! TCATTTGCATGTAAAATTGT+GGG - chr8.2:22515816-22515835 None:intergenic 25.0%
!!! TTTTGTTTAGAAGCAAAAGT+TGG + chr8.2:22515520-22515539 MS.gene61297:intron 25.0%
AAAATCTAACGGAGGAAAAT+AGG + chr8.2:22515746-22515765 MS.gene61297:CDS 30.0%
CATTTGCATGTAAAATTGTG+GGG - chr8.2:22515815-22515834 None:intergenic 30.0%
GTCATTTGCATGTAAAATTG+TGG - chr8.2:22515817-22515836 None:intergenic 30.0%
TTTCTTCAAGAATAGCTGAT+TGG - chr8.2:22515387-22515406 None:intergenic 30.0%
!! TTGATTGTGAAGTGTTGAAA+AGG + chr8.2:22515716-22515735 MS.gene61297:CDS 30.0%
AAAATGCATACCTGAAGTGA+AGG - chr8.2:22514924-22514943 None:intergenic 35.0%
ATGGTTGAAAAGGAAGACTT+GGG + chr8.2:22514833-22514852 MS.gene61297:CDS 35.0%
CTGACAATACTGAAATCGTT+AGG - chr8.2:22515029-22515048 None:intergenic 35.0%
TCAAACATCCTATTTGTGAC+TGG - chr8.2:22515985-22516004 None:intergenic 35.0%
TCAGTATTGTCAGTTGAGTT+AGG + chr8.2:22515036-22515055 MS.gene61297:intron 35.0%
TTAGCATTTCGTAGTTATCC+TGG - chr8.2:22514999-22515018 None:intergenic 35.0%
!! AAGGTGCTGTGAAAATCTAA+CGG + chr8.2:22515735-22515754 MS.gene61297:CDS 35.0%
AACCAGACTTCTACTTGTCT+TGG - chr8.2:22515572-22515591 None:intergenic 40.0%
ACTTGTGTGGATCTAGAGAA+TGG - chr8.2:22514952-22514971 None:intergenic 40.0%
ATCTAACCGTCACCATTCTA+TGG + chr8.2:22515909-22515928 MS.gene61297:CDS 40.0%
CACATAGTAAGAGTAGTTGG+TGG - chr8.2:22515841-22515860 None:intergenic 40.0%
CTTGTGTGGATCTAGAGAAT+GGG - chr8.2:22514951-22514970 None:intergenic 40.0%
GATCATGACGTGGAAAATAG+AGG + chr8.2:22515301-22515320 MS.gene61297:CDS 40.0%
GATGGTTGAAAAGGAAGACT+TGG + chr8.2:22514832-22514851 MS.gene61297:CDS 40.0%
GCATCAACACAAGCATTAGA+TGG - chr8.2:22515889-22515908 None:intergenic 40.0%
GGAAAATAGGAGACTACAGA+AGG + chr8.2:22515759-22515778 MS.gene61297:CDS 40.0%
GTCAGTTGAGTTAGGTCTTA+CGG + chr8.2:22515044-22515063 MS.gene61297:intron 40.0%
TACAGCTATTGAATGCCAAG+AGG + chr8.2:22515204-22515223 MS.gene61297:CDS 40.0%
TGGCATTCAATAGCTGTAGA+TGG - chr8.2:22515202-22515221 None:intergenic 40.0%
TTAGATCATGGATTCGAACC+AGG + chr8.2:22514978-22514997 MS.gene61297:intron 40.0%
! ACACTTGAAACTGTGCTGTT+TGG - chr8.2:22515253-22515272 None:intergenic 40.0%
! AGCACAGTTTCAAGTGTTAG+TGG + chr8.2:22515256-22515275 MS.gene61297:CDS 40.0%
!! CAAACCTAGCTCTTCTGTTT+TGG - chr8.2:22515595-22515614 None:intergenic 40.0%
AAGAAGACGCTGAAACTGCT+AGG + chr8.2:22515338-22515357 MS.gene61297:CDS 45.0%
ACCTGAAGTGAAGGTTTGGA+TGG - chr8.2:22514915-22514934 None:intergenic 45.0%
CGAAACTTGGAAACATGCAG+AGG + chr8.2:22515133-22515152 MS.gene61297:CDS 45.0%
GAGAGAAGAAGATCATGACG+TGG + chr8.2:22515291-22515310 MS.gene61297:CDS 45.0%
GAGAGTGGAAAATACCTACG+AGG + chr8.2:22515157-22515176 MS.gene61297:CDS 45.0%
GCATACCTGAAGTGAAGGTT+TGG - chr8.2:22514919-22514938 None:intergenic 45.0%
GGGCACATAGTAAGAGTAGT+TGG - chr8.2:22515844-22515863 None:intergenic 45.0%
GGTTCCAAAACAGAAGAGCT+AGG + chr8.2:22515588-22515607 MS.gene61297:CDS 45.0%
GTCCAAGACAAGTAGAAGTC+TGG + chr8.2:22515567-22515586 MS.gene61297:CDS 45.0%
GTGAAGGTTTGGATGGAAGA+TGG - chr8.2:22514908-22514927 None:intergenic 45.0%
GTGCTGTGAAAATCTAACGG+AGG + chr8.2:22515738-22515757 MS.gene61297:CDS 45.0%
TACGAGGAATCGACGTGAAT+CGG + chr8.2:22515173-22515192 MS.gene61297:CDS 45.0%
TCCAAGTTTCGATCTGTACG+AGG - chr8.2:22515124-22515143 None:intergenic 45.0%
TCCATCCAAACCTTCACTTC+AGG + chr8.2:22514911-22514930 MS.gene61297:CDS 45.0%
TCCTCGTACAGATCGAAACT+TGG + chr8.2:22515120-22515139 MS.gene61297:intron 45.0%
TTGGCACTTGCAAAGCAACT+TGG + chr8.2:22515539-22515558 MS.gene61297:CDS 45.0%
! TGGATGGAAGATGGTTTGTG+AGG - chr8.2:22514899-22514918 None:intergenic 45.0%
ACAGCCACACGTTCACAAGA+AGG - chr8.2:22515865-22515884 None:intergenic 50.0%
CAGCCACACGTTCACAAGAA+GGG - chr8.2:22515864-22515883 None:intergenic 50.0%
CCAAGAGGAAGAAGAAGCAG+GGG + chr8.2:22515219-22515238 MS.gene61297:CDS 50.0%
CTGCTGCTCCAGTCACAAAT+AGG + chr8.2:22515974-22515993 MS.gene61297:CDS 50.0%
CTTGGGCCATAGAATGGTGA+CGG - chr8.2:22515918-22515937 None:intergenic 50.0%
GAAACATGCAGAGGAGAGAG+TGG + chr8.2:22515142-22515161 MS.gene61297:CDS 50.0%
GACGAAGCTGAAGCAAACAG+AGG + chr8.2:22515693-22515712 MS.gene61297:CDS 50.0%
GCCAAGAGGAAGAAGAAGCA+GGG + chr8.2:22515218-22515237 MS.gene61297:CDS 50.0%
TGCCAAGAGGAAGAAGAAGC+AGG + chr8.2:22515217-22515236 MS.gene61297:CDS 50.0%
!! GATTCACGTCGATTCCTCGT+AGG - chr8.2:22515174-22515193 None:intergenic 50.0%
CCCCTGCTTCTTCTTCCTCT+TGG - chr8.2:22515222-22515241 None:intergenic 55.0%
GTGCCCTTCTTGTGAACGTG+TGG + chr8.2:22515858-22515877 MS.gene61297:CDS 55.0%
TATAGGCACAGCCCGAGGAT+GGG - chr8.2:22515941-22515960 None:intergenic 55.0%
! GATGGGCTTGGGCCATAGAA+TGG - chr8.2:22515924-22515943 None:intergenic 55.0%
ACTGGAGCAGCAGAAGCCCA+TGG - chr8.2:22515967-22515986 None:intergenic 60.0%
CATCCTCGGGCTGTGCCTAT+AGG + chr8.2:22515940-22515959 MS.gene61297:CDS 60.0%
CTATAGGCACAGCCCGAGGA+TGG - chr8.2:22515942-22515961 None:intergenic 60.0%
CTATGGCCCAAGCCCATCCT+CGG + chr8.2:22515926-22515945 MS.gene61297:CDS 60.0%
CTGGAGCAGCAGAAGCCCAT+GGG - chr8.2:22515966-22515985 None:intergenic 60.0%
GCAGAAGCCCATGGGCCTAT+AGG - chr8.2:22515958-22515977 None:intergenic 60.0%
GGCTGTGCCTATAGGCCCAT+GGG + chr8.2:22515948-22515967 MS.gene61297:CDS 60.0%
TATGGCCCAAGCCCATCCTC+GGG + chr8.2:22515927-22515946 MS.gene61297:CDS 60.0%
GGGCTGTGCCTATAGGCCCA+TGG + chr8.2:22515947-22515966 MS.gene61297:CDS 65.0%
! CACAGCCCGAGGATGGGCTT+GGG - chr8.2:22515935-22515954 None:intergenic 65.0%
GGGCCTATAGGCACAGCCCG+AGG - chr8.2:22515946-22515965 None:intergenic 70.0%
! GCACAGCCCGAGGATGGGCT+TGG - chr8.2:22515936-22515955 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 22514827 22516020 22514827 ID=MS.gene61297
chr8.2 mRNA 22514827 22516020 22514827 ID=MS.gene61297.t1;Parent=MS.gene61297
chr8.2 exon 22514827 22514932 22514827 ID=MS.gene61297.t1.exon1;Parent=MS.gene61297.t1
chr8.2 CDS 22514827 22514932 22514827 ID=cds.MS.gene61297.t1;Parent=MS.gene61297.t1
chr8.2 exon 22515131 22515435 22515131 ID=MS.gene61297.t1.exon2;Parent=MS.gene61297.t1
chr8.2 CDS 22515131 22515435 22515131 ID=cds.MS.gene61297.t1;Parent=MS.gene61297.t1
chr8.2 exon 22515530 22515609 22515530 ID=MS.gene61297.t1.exon3;Parent=MS.gene61297.t1
chr8.2 CDS 22515530 22515609 22515530 ID=cds.MS.gene61297.t1;Parent=MS.gene61297.t1
chr8.2 exon 22515693 22516020 22515693 ID=MS.gene61297.t1.exon4;Parent=MS.gene61297.t1
chr8.2 CDS 22515693 22516020 22515693 ID=cds.MS.gene61297.t1;Parent=MS.gene61297.t1
Gene Sequence

>MS.gene61297

ATGATGATGGTTGAAAAGGAAGACTTGGGTTTGAGTCTTAGCTTGAACTTCTTTCACAATAACTCTTCTCCTCACAAACCATCTTCCATCCAAACCTTCACTTCAGGTATGCATTTTTTTTCCCATTCTCTAGATCCACACAAGTATTTTTTTAGATCATGGATTCGAACCAGGATAACTACGAAATGCTAAACTTAAACCTAACGATTTCAGTATTGTCAGTTGAGTTAGGTCTTACGGACCCATTAAAGTTTTTAATTCAACAAAACATAAATGATATTCAAAATGATTTTTCCTCGTACAGATCGAAACTTGGAAACATGCAGAGGAGAGAGTGGAAAATACCTACGAGGAATCGACGTGAATCGGTTACCATCTACAGCTATTGAATGCCAAGAGGAAGAAGAAGCAGGGGTTTCATCTCCAAACAGCACAGTTTCAAGTGTTAGTGGAAAAAGAAGCTTGAGAGAAGAAGATCATGACGTGGAAAATAGAGGAAATATCAGTGATGAAGAAGACGCTGAAACTGCTAGGAAAAAACTTAGACTCTCTAAAGACCAATCAGCTATTCTTGAAGAAACTTTCAAAGAACACAATACCCTTAATCCCGTAATTAATCTATCTCAATACCAATCAACTTCCTTAATTATTTTATTAATTTTTTGTTTATTTTTTTACTAATTTGGTTTTTTATTTTGTTTAGAAGCAAAAGTTGGCACTTGCAAAGCAACTTGGTCTTCGTCCAAGACAAGTAGAAGTCTGGTTCCAAAACAGAAGAGCTAGGTTTGTTATTTAAAAGTAAAATTTCAATTAAGCAATGATTTAATTAGTATTTTTAATTTATGATTTGAAATTATTTATTATAGGACGAAGCTGAAGCAAACAGAGGTTGATTGTGAAGTGTTGAAAAGGTGCTGTGAAAATCTAACGGAGGAAAATAGGAGACTACAGAAGGAAGTTCAAGAGCTTAGAGCACTGAAACTTTCCCCACAATTTTACATGCAAATGACTCCACCAACTACTCTTACTATGTGCCCTTCTTGTGAACGTGTGGCTGTTCCATCTAATGCTTGTGTTGATGCATCTAACCGTCACCATTCTATGGCCCAAGCCCATCCTCGGGCTGTGCCTATAGGCCCATGGGCTTCTGCTGCTCCAGTCACAAATAGGATGTTTGATGTTTTCCGTCAATGA
Protein sequence

>MS.gene61297.t1

MMMVEKEDLGLSLSLNFFHNNSSPHKPSSIQTFTSDRNLETCRGESGKYLRGIDVNRLPSTAIECQEEEEAGVSSPNSTVSSVSGKRSLREEDHDVENRGNISDEEDAETARKKLRLSKDQSAILEETFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEVLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPSNACVDASNRHHSMAQAHPRAVPIGPWASAAPVTNRMFDVFRQ