AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61600.t1 MTR_4g047580 67.399 592 124 5 20 594 1 540 0.0 747
MS.gene61600.t1 MTR_4g049760 72.959 588 82 6 1 577 1 522 0.0 742
MS.gene61600.t1 MTR_4g049790 62.418 612 139 9 9 594 17 563 0.0 669
MS.gene61600.t1 MTR_2g088000 42.105 532 232 13 76 592 120 590 4.02e-102 322
MS.gene61600.t1 MTR_2g023930 36.765 544 223 17 52 554 67 530 2.69e-77 255
MS.gene61600.t1 MTR_3g053330 33.661 508 229 17 52 553 39 444 1.83e-67 227
MS.gene61600.t1 MTR_4g132430 54.299 221 91 3 330 541 105 324 1.54e-63 213
MS.gene61600.t1 MTR_4g132430 54.299 221 91 3 330 541 239 458 5.93e-63 216
MS.gene61600.t1 MTR_7g110720 46.122 245 105 6 337 579 174 393 8.94e-53 186
MS.gene61600.t1 MTR_7g110720 49.091 220 92 5 337 554 201 402 1.05e-52 186
MS.gene61600.t1 MTR_2g045360 52.795 161 71 2 323 478 182 342 5.05e-46 168
MS.gene61600.t1 MTR_7g009730 31.105 344 156 11 306 572 160 499 1.81e-34 138
MS.gene61600.t1 MTR_4g094412 34.551 301 158 7 301 568 193 487 1.91e-34 137
MS.gene61600.t1 MTR_4g094412 34.551 301 158 8 301 568 184 478 2.46e-34 136
MS.gene61600.t1 MTR_4g107970 64.474 76 27 0 337 412 163 238 1.23e-29 123
MS.gene61600.t1 MTR_4g107970 64.474 76 27 0 337 412 240 315 1.88e-29 123
MS.gene61600.t1 MTR_4g007060 36.486 148 70 4 329 476 105 228 1.13e-23 101
MS.gene61600.t1 MTR_4g007060 36.486 148 70 4 329 476 139 262 1.36e-23 102
MS.gene61600.t1 MTR_7g011820 43.103 116 55 2 309 424 377 481 1.62e-23 104
MS.gene61600.t1 MTR_5g042920 42.017 119 64 2 322 436 286 403 4.12e-23 102
MS.gene61600.t1 MTR_2g105060 51.282 78 36 1 338 413 78 155 1.94e-22 97.1
MS.gene61600.t1 MTR_2g105060 51.282 78 36 1 338 413 153 230 3.16e-22 98.2
MS.gene61600.t1 MTR_5g044695 69.811 53 16 0 330 382 55 107 7.71e-22 91.3
MS.gene61600.t1 MTR_4g082580 48.148 81 41 1 334 414 260 339 1.22e-21 97.8
MS.gene61600.t1 MTR_7g028415 55.714 70 30 1 342 411 83 151 1.25e-21 92.8
MS.gene61600.t1 MTR_7g028710 55.714 70 30 1 342 411 83 151 1.25e-21 92.8
MS.gene61600.t1 MTR_1g013790 54.545 66 30 0 347 412 96 161 1.31e-21 95.1
MS.gene61600.t1 MTR_3g056100 41.284 109 60 2 325 430 231 338 1.41e-21 98.2
MS.gene61600.t1 MTR_3g056100 41.284 109 60 2 325 430 244 351 1.45e-21 98.2
MS.gene61600.t1 MTR_5g094430 52.500 80 37 1 335 414 213 291 2.01e-21 97.4
MS.gene61600.t1 MTR_3g056100 41.284 109 60 2 325 430 388 495 2.05e-21 99.0
MS.gene61600.t1 MTR_5g074400 45.217 115 56 3 305 414 369 481 2.07e-21 98.6
MS.gene61600.t1 MTR_3g056100 41.284 109 60 2 325 430 375 482 2.13e-21 98.6
MS.gene61600.t1 MTR_5g094430 52.500 80 37 1 335 414 235 313 2.19e-21 97.4
MS.gene61600.t1 MTR_3g009470 53.750 80 36 1 335 414 478 556 2.26e-21 99.0
MS.gene61600.t1 MTR_4g013260 53.165 79 36 1 334 412 318 395 3.36e-21 97.4
MS.gene61600.t1 MTR_4g013260 40.698 86 44 3 336 419 170 250 1.85e-11 67.0
MS.gene61600.t1 MTR_7g071120 54.321 81 36 1 334 414 306 385 3.55e-21 97.4
MS.gene61600.t1 MTR_4g094588 44.554 101 54 2 339 439 165 263 4.18e-21 95.5
MS.gene61600.t1 MTR_8g096730 38.614 101 61 1 315 415 33 132 4.29e-21 90.5
MS.gene61600.t1 MTR_5g094430 52.500 80 37 1 335 414 347 425 5.04e-21 97.4
MS.gene61600.t1 MTR_3g106060 50.667 75 37 0 335 409 121 195 1.40e-20 92.8
MS.gene61600.t1 MTR_3g031220 43.564 101 56 1 313 413 326 425 1.95e-20 95.1
MS.gene61600.t1 MTR_2g033820 48.718 78 39 1 339 416 190 266 2.04e-20 94.0
MS.gene61600.t1 MTR_6g038890 69.811 53 16 0 330 382 166 218 2.18e-20 90.5
MS.gene61600.t1 MTR_7g109800 43.617 94 48 2 337 430 130 218 2.40e-20 92.4
MS.gene61600.t1 MTR_7g079010 48.750 80 40 1 331 410 120 198 2.68e-20 90.1
MS.gene61600.t1 MTR_7g080020 44.762 105 55 2 312 414 451 554 3.66e-20 95.5
MS.gene61600.t1 MTR_7g080020 27.434 226 104 10 196 416 172 342 1.89e-11 67.4
MS.gene61600.t1 MTR_7g109600 40.000 110 61 2 331 438 30 136 3.66e-20 90.9
MS.gene61600.t1 MTR_3g104750 39.815 108 64 1 303 410 55 161 7.52e-20 87.4
MS.gene61600.t1 MTR_1g086790 47.436 78 40 1 339 416 145 221 9.64e-20 90.9
MS.gene61600.t1 MTR_7g080000 51.316 76 36 1 339 414 419 493 1.21e-19 93.6
MS.gene61600.t1 MTR_1g013760 43.478 92 52 0 337 428 125 216 2.53e-19 89.0
MS.gene61600.t1 MTR_4g122530 48.684 76 38 1 338 413 194 268 4.48e-19 90.5
MS.gene61600.t1 MTR_1g015140 51.351 74 35 1 337 410 87 159 9.90e-19 84.0
MS.gene61600.t1 MTR_3g095040 50.667 75 36 1 339 413 105 178 1.33e-18 85.1
MS.gene61600.t1 MTR_2g032030 46.667 75 40 0 348 422 263 337 2.23e-18 88.6
MS.gene61600.t1 MTR_5g091390 46.154 78 41 1 339 416 144 220 2.48e-18 86.7
MS.gene61600.t1 MTR_2g032030 46.667 75 40 0 348 422 263 337 2.69e-18 88.2
MS.gene61600.t1 MTR_5g097490 42.391 92 52 1 323 414 223 313 4.74e-18 87.0
MS.gene61600.t1 MTR_7g100510 43.210 81 45 1 332 412 341 420 7.80e-18 86.7
MS.gene61600.t1 MTR_7g100510 42.254 71 39 2 353 423 190 258 9.65e-11 64.7
MS.gene61600.t1 MTR_8g087000 50.794 63 31 0 352 414 77 139 1.67e-17 82.8
MS.gene61600.t1 MTR_8g087000 50.794 63 31 0 352 414 76 138 1.89e-17 82.8
MS.gene61600.t1 MTR_1g099600 45.055 91 48 1 352 442 185 273 2.01e-17 84.0
MS.gene61600.t1 MTR_5g043880 46.154 78 41 1 332 409 104 180 2.24e-17 83.2
MS.gene61600.t1 MTR_8g092010 46.753 77 40 1 339 415 95 170 3.25e-17 80.5
MS.gene61600.t1 MTR_8g098945 45.833 72 39 0 351 422 128 199 3.63e-17 82.4
MS.gene61600.t1 MTR_1g009613 47.059 85 43 1 337 419 245 329 4.54e-17 83.2
MS.gene61600.t1 MTR_7g079040 46.667 75 40 0 348 422 150 224 4.75e-17 83.2
MS.gene61600.t1 MTR_8g028565 46.667 75 40 0 348 422 151 225 6.66e-17 82.8
MS.gene61600.t1 MTR_2g083870 43.038 79 45 0 343 421 71 149 1.27e-16 80.5
MS.gene61600.t1 MTR_2g024350 30.714 140 87 2 347 476 3 142 1.33e-16 79.7
MS.gene61600.t1 MTR_4g094908 52.308 65 31 0 350 414 264 328 1.78e-16 81.6
MS.gene61600.t1 MTR_8g007270 45.570 79 42 1 331 409 133 210 2.91e-16 78.6
MS.gene61600.t1 MTR_2g016770 48.438 64 33 0 349 412 32 95 3.69e-16 78.2
MS.gene61600.t1 MTR_2g016770 48.438 64 33 0 349 412 24 87 4.39e-16 77.8
MS.gene61600.t1 MTR_5g016610 51.613 62 30 0 350 411 197 258 1.60e-15 77.4
MS.gene61600.t1 MTR_3g095080 40.217 92 53 2 339 430 131 220 3.25e-15 75.5
MS.gene61600.t1 MTR_4g130900 45.000 80 43 1 337 416 344 422 3.73e-15 79.0
MS.gene61600.t1 MTR_1g077780 46.053 76 40 1 339 414 49 123 4.54e-15 73.2
MS.gene61600.t1 MTR_1g070455 51.667 60 29 0 350 409 291 350 5.16e-15 77.4
MS.gene61600.t1 MTR_3g095080 43.529 85 46 2 339 423 155 237 5.51e-15 75.5
MS.gene61600.t1 MTR_2g024380 41.558 77 45 0 347 423 246 322 1.67e-14 76.6
MS.gene61600.t1 MTR_8g092140 51.667 60 28 1 350 409 158 216 4.28e-14 72.4
MS.gene61600.t1 MTR_6g086555 45.000 80 42 2 339 417 193 271 6.08e-14 74.3
MS.gene61600.t1 MTR_4g127040 48.333 60 31 0 350 409 243 302 6.48e-14 73.6
MS.gene61600.t1 MTR_1g078260 47.222 72 36 2 339 409 234 304 3.07e-13 72.8
MS.gene61600.t1 MTR_4g007060 44.262 61 34 0 329 389 139 199 1.20e-12 68.6
MS.gene61600.t1 MTR_7g073430 33.333 132 66 3 298 407 48 179 2.28e-12 68.2
MS.gene61600.t1 MTR_7g062220 52.632 57 26 1 353 409 125 180 6.21e-12 67.4
MS.gene61600.t1 MTR_0117s0040 43.333 60 34 0 350 409 72 131 4.19e-11 63.9
MS.gene61600.t1 MTR_3g108960 41.667 60 35 0 350 409 312 371 4.93e-11 65.5
MS.gene61600.t1 MTR_3g031220 39.506 81 43 3 336 416 186 260 5.50e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61600.t1 AT4G04450 41.127 479 215 12 89 553 78 503 6.58e-87 280
MS.gene61600.t1 AT4G04450 39.220 487 213 13 106 578 1 418 7.87e-77 251
MS.gene61600.t1 AT1G62300 49.627 268 106 7 329 571 289 552 6.82e-62 214
MS.gene61600.t1 AT4G22070 70.946 148 42 1 331 477 276 423 9.08e-57 200
MS.gene61600.t1 AT4G22070 36.441 118 74 1 89 205 76 193 5.65e-13 72.0
MS.gene61600.t1 AT4G22070 70.946 148 42 1 331 477 276 423 9.08e-57 200
MS.gene61600.t1 AT4G22070 36.441 118 74 1 89 205 76 193 5.65e-13 72.0
MS.gene61600.t1 AT4G22070 70.946 148 42 1 331 477 276 423 9.08e-57 200
MS.gene61600.t1 AT4G22070 36.441 118 74 1 89 205 76 193 5.65e-13 72.0
MS.gene61600.t1 AT4G22070 70.946 148 42 1 331 477 276 423 9.08e-57 200
MS.gene61600.t1 AT4G22070 36.441 118 74 1 89 205 76 193 5.65e-13 72.0
MS.gene61600.t1 AT4G01720 40.273 293 128 7 286 550 170 443 5.68e-43 161
MS.gene61600.t1 AT1G68150 47.368 152 66 2 296 433 165 316 3.73e-38 145
MS.gene61600.t1 AT1G69810 46.386 166 82 4 323 487 116 275 5.28e-36 138
MS.gene61600.t1 AT1G69810 46.386 166 82 4 323 487 174 333 8.46e-36 139
MS.gene61600.t1 AT1G18860 45.109 184 89 3 335 511 222 400 4.07e-34 136
MS.gene61600.t1 AT5G15130 32.685 257 130 8 337 554 212 464 2.47e-29 122
MS.gene61600.t1 AT1G13960 51.899 79 37 1 334 412 238 315 1.13e-22 100
MS.gene61600.t1 AT1G13960 34.483 116 63 4 306 416 31 138 3.25e-11 65.9
MS.gene61600.t1 AT1G80840 48.718 78 38 1 338 413 130 207 1.55e-22 99.0
MS.gene61600.t1 AT1G13960 51.899 79 37 1 334 412 391 468 1.78e-22 101
MS.gene61600.t1 AT1G13960 34.483 116 63 4 306 416 184 291 2.21e-11 67.0
MS.gene61600.t1 AT2G03340 48.276 87 44 1 328 414 391 476 4.80e-22 100
MS.gene61600.t1 AT2G03340 50.000 60 28 2 353 412 251 308 1.80e-11 67.4
MS.gene61600.t1 AT2G25000 32.086 187 106 4 245 415 7 188 1.29e-21 95.1
MS.gene61600.t1 AT1G29860 44.681 94 46 2 337 430 121 208 1.40e-21 95.5
MS.gene61600.t1 AT2G25000 44.944 89 49 0 327 415 78 166 1.46e-21 94.4
MS.gene61600.t1 AT2G25000 44.944 89 49 0 327 415 78 166 1.46e-21 94.4
MS.gene61600.t1 AT2G25000 29.902 204 130 4 217 415 14 209 1.51e-21 95.1
MS.gene61600.t1 AT5G41570 44.444 99 50 2 339 437 85 178 2.01e-21 92.4
MS.gene61600.t1 AT1G64000 44.231 104 53 2 334 437 96 194 2.16e-21 92.8
MS.gene61600.t1 AT5G13080 54.795 73 32 1 339 411 54 125 2.29e-21 91.3
MS.gene61600.t1 AT4G18170 39.316 117 60 2 339 445 159 274 9.77e-21 94.0
MS.gene61600.t1 AT5G56270 52.500 80 37 1 335 414 470 548 1.03e-20 97.1
MS.gene61600.t1 AT5G46350 41.346 104 60 1 339 442 170 272 1.48e-20 93.6
MS.gene61600.t1 AT2G38470 50.617 81 39 1 334 414 344 423 1.80e-20 95.5
MS.gene61600.t1 AT4G31800 41.905 105 56 1 331 430 85 189 2.33e-20 91.3
MS.gene61600.t1 AT3G01080 45.349 86 46 1 327 412 319 403 2.62e-20 94.7
MS.gene61600.t1 AT3G01080 45.349 86 46 1 327 412 281 365 3.01e-20 94.0
MS.gene61600.t1 AT4G31800 54.545 66 30 0 351 416 175 240 3.43e-20 92.0
MS.gene61600.t1 AT4G26640 48.750 80 40 1 335 414 188 266 4.23e-20 93.2
MS.gene61600.t1 AT4G26640 48.750 80 40 1 335 414 188 266 4.23e-20 93.2
MS.gene61600.t1 AT4G26640 48.750 80 40 1 335 414 188 266 4.23e-20 93.2
MS.gene61600.t1 AT4G26640 48.750 80 40 1 335 414 188 266 4.23e-20 93.2
MS.gene61600.t1 AT2G30250 43.158 95 52 2 322 416 299 391 5.70e-20 92.8
MS.gene61600.t1 AT5G26170 51.389 72 34 1 338 409 99 169 7.53e-20 87.8
MS.gene61600.t1 AT3G01970 54.167 72 32 1 338 409 51 121 7.63e-20 87.0
MS.gene61600.t1 AT4G26640 48.750 80 40 1 335 414 324 402 8.96e-20 93.2
MS.gene61600.t1 AT4G26640 48.750 80 40 1 335 414 292 370 9.16e-20 93.2
MS.gene61600.t1 AT4G26640 48.750 80 40 1 335 414 364 442 1.20e-19 93.2
MS.gene61600.t1 AT5G49520 45.000 80 43 1 337 416 206 284 1.20e-19 92.0
MS.gene61600.t1 AT2G04880 41.758 91 52 1 322 412 253 342 1.48e-19 92.4
MS.gene61600.t1 AT2G04880 35.385 130 78 4 348 476 107 231 4.44e-13 72.0
MS.gene61600.t1 AT2G04880 41.758 91 52 1 322 412 277 366 1.98e-19 92.0
MS.gene61600.t1 AT2G04880 48.529 68 33 2 348 415 107 172 6.73e-13 71.6
MS.gene61600.t1 AT5G07100 48.148 81 41 1 332 412 121 200 3.48e-19 87.0
MS.gene61600.t1 AT5G07100 48.148 81 41 1 332 412 121 200 3.48e-19 87.0
MS.gene61600.t1 AT5G07100 48.148 81 41 1 332 412 121 200 3.48e-19 87.0
MS.gene61600.t1 AT5G07100 48.148 81 41 1 332 412 121 200 3.48e-19 87.0
MS.gene61600.t1 AT5G64810 48.936 94 44 2 319 409 74 166 3.65e-19 86.3
MS.gene61600.t1 AT2G46130 50.000 72 35 1 339 410 17 87 5.36e-19 83.2
MS.gene61600.t1 AT5G07100 45.882 85 45 1 332 416 214 297 6.94e-19 88.2
MS.gene61600.t1 AT2G47260 45.783 83 44 1 337 419 159 240 1.06e-18 88.2
MS.gene61600.t1 AT5G52830 46.341 82 44 0 341 422 154 235 3.34e-18 87.0
MS.gene61600.t1 AT1G30650 48.649 74 38 0 346 419 211 284 3.94e-18 87.8
MS.gene61600.t1 AT1G69310 46.667 75 39 1 335 409 130 203 6.19e-18 85.1
MS.gene61600.t1 AT1G69310 46.667 75 39 1 335 409 130 203 6.19e-18 85.1
MS.gene61600.t1 AT1G69310 46.667 75 39 1 335 409 130 203 6.19e-18 85.1
MS.gene61600.t1 AT2G30590 55.224 67 29 1 350 415 311 377 7.36e-18 86.3
MS.gene61600.t1 AT3G62340 51.351 74 35 1 339 412 105 177 7.84e-18 84.3
MS.gene61600.t1 AT2G34830 47.297 74 39 0 346 419 209 282 1.01e-17 86.3
MS.gene61600.t1 AT2G34830 47.297 74 39 0 346 419 218 291 1.20e-17 86.3
MS.gene61600.t1 AT1G29280 47.143 70 37 0 343 412 65 134 1.48e-17 83.2
MS.gene61600.t1 AT3G58710 45.205 73 40 0 343 415 62 134 1.51e-17 83.6
MS.gene61600.t1 AT3G58710 45.205 73 40 0 343 415 61 133 1.60e-17 83.6
MS.gene61600.t1 AT4G26440 37.600 125 73 2 339 463 359 478 2.15e-17 86.3
MS.gene61600.t1 AT4G30935 35.556 135 85 2 309 442 288 421 3.26e-17 85.1
MS.gene61600.t1 AT4G01250 46.667 75 40 0 348 422 124 198 3.44e-17 83.2
MS.gene61600.t1 AT2G23320 55.932 59 26 0 353 411 241 299 6.54e-17 82.4
MS.gene61600.t1 AT4G23550 44.737 76 42 0 347 422 135 210 1.94e-16 80.9
MS.gene61600.t1 AT1G55600 46.053 76 40 1 339 414 294 368 3.23e-16 82.0
MS.gene61600.t1 AT2G44745 43.038 79 44 1 331 409 124 201 5.24e-16 77.8
MS.gene61600.t1 AT4G24240 53.226 62 29 0 350 411 279 340 6.13e-16 80.1
MS.gene61600.t1 AT5G28650 53.333 60 28 0 350 409 260 319 7.95e-16 79.3
MS.gene61600.t1 AT3G04670 53.333 60 28 0 350 409 260 319 1.78e-15 78.6
MS.gene61600.t1 AT4G39410 47.887 71 36 1 339 409 210 279 3.87e-15 77.0
MS.gene61600.t1 AT5G45050 47.059 68 36 0 352 419 1180 1247 4.51e-15 79.7
MS.gene61600.t1 AT5G45050 47.059 68 36 0 352 419 1041 1108 4.63e-15 79.3
MS.gene61600.t1 AT5G45050 47.059 68 36 0 352 419 1152 1219 4.76e-15 79.3
MS.gene61600.t1 AT4G31550 53.333 60 28 0 350 409 244 303 4.96e-15 77.0
MS.gene61600.t1 AT4G31550 53.333 60 28 0 350 409 243 302 5.00e-15 77.0
MS.gene61600.t1 AT2G46130 47.222 72 33 2 339 410 17 83 1.03e-14 70.9
MS.gene61600.t1 AT2G24570 51.667 60 29 0 350 409 241 300 2.37e-14 74.7
MS.gene61600.t1 AT2G37260 40.000 100 53 2 312 411 233 325 2.58e-14 75.1
MS.gene61600.t1 AT2G37260 40.000 100 53 2 312 411 235 327 2.77e-14 75.1
MS.gene61600.t1 AT2G37260 50.769 65 31 1 347 411 344 407 4.66e-14 75.1
MS.gene61600.t1 AT2G21900 32.143 112 70 2 304 415 66 171 4.93e-14 71.6
MS.gene61600.t1 AT5G45260 39.785 93 50 2 336 426 1196 1284 8.32e-12 68.9

Find 113 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAAAATTGCAGGAAAATT+TGG 0.122453 4.1:-48092298 None:intergenic
CCTAACTGATCTTTACTTAT+AGG 0.125256 4.1:-48090819 None:intergenic
AATAGAGTTTGATTTCTTTA+AGG 0.143956 4.1:+48087621 MS.gene61600:CDS
GAAGTTTATGATGGAAAATT+TGG 0.188184 4.1:+48090570 MS.gene61600:CDS
GTTCTCTTGTCTTCTGAATT+AGG 0.194946 4.1:-48088000 None:intergenic
TTGACTGCCCGAGCAATATT+TGG 0.235969 4.1:-48092256 None:intergenic
GCAGAAGTCTGACGGTTTAA+AGG 0.243460 4.1:-48092151 None:intergenic
AACTCAAGGTTAATATTAAC+TGG 0.250989 4.1:-48087484 None:intergenic
ACTGAAAATAATAATAATAA+TGG 0.254213 4.1:+48092376 MS.gene61600:CDS
TCCCTTTCCTAGTTAATATT+AGG 0.292067 4.1:+48087551 MS.gene61600:CDS
CGATAATACGCTTTAGGAAA+TGG 0.298424 4.1:-48091132 None:intergenic
AATAAGGTTATGGAAGTTAA+AGG 0.322766 4.1:+48090543 MS.gene61600:CDS
ACTGGTGCCAAGGAAAATTA+TGG 0.327217 4.1:+48090503 MS.gene61600:CDS
TCAAGTGTAATGGTTGGAAA+TGG 0.343703 4.1:-48092076 None:intergenic
AAAGGAGTTTGAAACTGATC+TGG 0.348918 4.1:-48092133 None:intergenic
CTGCAACGATAATACGCTTT+AGG 0.349365 4.1:-48091138 None:intergenic
CTTGTTTCATTAGATGAGAT+TGG 0.354120 4.1:-48087598 None:intergenic
AACTGATCTGGGTTCCTTTG+TGG 0.354361 4.1:-48092121 None:intergenic
TTGTGTCCCTTCAAAACTAT+TGG 0.363975 4.1:+48092228 MS.gene61600:CDS
AAAAGGAAATTTGTTGATGC+TGG 0.369100 4.1:+48090630 MS.gene61600:CDS
CTACTAGTATTGGTAGTAAC+AGG 0.370957 4.1:-48087946 None:intergenic
GATGCAAGATTGTAAGGTTA+AGG 0.371759 4.1:+48090413 MS.gene61600:CDS
GCCATTTCTTTGGCTGCTGC+AGG 0.373631 4.1:-48091917 None:intergenic
TCTTGGATCAGCTACTAATA+AGG 0.377634 4.1:+48090527 MS.gene61600:CDS
TAGTGATACATCATCTTTGT+TGG 0.382295 4.1:+48087705 MS.gene61600:CDS
TGCTGGGTTGGCTACTAATA+AGG 0.384058 4.1:+48090647 MS.gene61600:CDS
GTAGCAGCAGTAGTGTTGTT+TGG 0.384758 4.1:-48092355 None:intergenic
CCAAGGAAAATTATGGATCT+TGG 0.393916 4.1:+48090510 MS.gene61600:CDS
TCTTTGGCTGCTGCAGGTAA+AGG 0.394516 4.1:-48091911 None:intergenic
AAGGTCAAAGAAGTGTTTAA+TGG 0.396617 4.1:+48090666 MS.gene61600:CDS
TAACATCCTCATTCTTACTT+AGG 0.406214 4.1:-48090884 None:intergenic
TTTCAGATGGCTATTCTTCA+AGG 0.408471 4.1:+48090291 MS.gene61600:intron
GGATGTCAATGGAGAAAGTA+TGG 0.409848 4.1:+48091087 MS.gene61600:CDS
CAAGTGTAATGGTTGGAAAT+GGG 0.411437 4.1:-48092075 None:intergenic
AAGCTTCGAGGAGGCTTTGA+AGG 0.419669 4.1:+48090854 MS.gene61600:CDS
CTTTGGCTGCTGCAGGTAAA+GGG 0.420375 4.1:-48091910 None:intergenic
ATCAGCTACTAATAAGGTTA+TGG 0.421535 4.1:+48090533 MS.gene61600:CDS
GATAATACGCTTTAGGAAAT+GGG 0.422168 4.1:-48091131 None:intergenic
TAGATGAGATTGGAGAGGTT+TGG 0.425712 4.1:-48087588 None:intergenic
GCTACTCTTACTTCCATGAT+TGG 0.436300 4.1:+48092322 MS.gene61600:CDS
AGAGTAGCTGATAAAATTGC+AGG 0.438645 4.1:-48092307 None:intergenic
CTATGAATATGATCCTTGTC+GGG 0.440174 4.1:-48087685 None:intergenic
CTGAAAATAATAATAATAAT+GGG 0.441417 4.1:+48092377 MS.gene61600:CDS
AATAACAATGGAAATATCAT+AGG 0.442615 4.1:+48092418 MS.gene61600:CDS
GGGTTCCTTTGTGGAGTAGT+TGG 0.444283 4.1:-48092112 None:intergenic
CAGAAGACAAGAGAACTAAG+AGG 0.448055 4.1:+48088007 MS.gene61600:CDS
GAAAGTGATGCAAGATTGTA+AGG 0.455429 4.1:+48090407 MS.gene61600:CDS
ACCTGCAGCAGCCAAAGAAA+TGG 0.461509 4.1:+48091916 MS.gene61600:CDS
CCTATAAGTAAAGATCAGTT+AGG 0.468887 4.1:+48090819 MS.gene61600:CDS
AGTTGGTGCAAAGGCAATGT+AGG 0.470135 4.1:+48090727 MS.gene61600:CDS
ACATCAACAACAAGCAATGA+TGG 0.474277 4.1:+48091977 MS.gene61600:CDS
AAAGGACAAGAAGTTTATGA+TGG 0.480807 4.1:+48090561 MS.gene61600:CDS
GACCTAATATTAACTAGGAA+AGG 0.482637 4.1:-48087553 None:intergenic
ACTATGAATATGATCCTTGT+CGG 0.485934 4.1:-48087686 None:intergenic
TGGTTGCTCAGTCCGAAAAC+AGG 0.487721 4.1:+48091170 MS.gene61600:CDS
AATGGGAACAATGTCGCAAA+AGG 0.491408 4.1:+48092394 MS.gene61600:CDS
GGCAGTTCCAAATATTGCTC+GGG 0.494464 4.1:+48092249 MS.gene61600:CDS
ATAGGTAGCAACAACAAAGA+TGG 0.501824 4.1:+48092436 MS.gene61600:CDS
AGCTGAGAATGGTGGAGTAC+TGG 0.504825 4.1:+48090485 MS.gene61600:CDS
CTCTGCCTCTGTCCCCGACA+AGG 0.510437 4.1:+48087672 MS.gene61600:CDS
TGGCAGTTCCAAATATTGCT+CGG 0.513777 4.1:+48092248 MS.gene61600:CDS
AAGGAGTTTGAAACTGATCT+GGG 0.518182 4.1:-48092132 None:intergenic
TAGTAGTGATCAATCTATGA+TGG 0.520634 4.1:+48087963 MS.gene61600:CDS
TGGCTGAGTATCACCAATCA+TGG 0.521571 4.1:-48092335 None:intergenic
ATTAACTGGATTTGAATCCA+TGG 0.524287 4.1:-48087470 None:intergenic
TGGGACTAAGTTTCAACTCA+AGG 0.529586 4.1:-48087498 None:intergenic
ACCTAATATTAACTAGGAAA+GGG 0.529628 4.1:-48087552 None:intergenic
ATGGTGGAGAATTAGTGAAA+AGG 0.530673 4.1:+48090613 MS.gene61600:CDS
GAAATTTGTTGATGCTGGGT+TGG 0.532637 4.1:+48090635 MS.gene61600:CDS
AGGAATTTGCAGAAGTCTGA+CGG 0.535434 4.1:-48092159 None:intergenic
GTTGTCATCACAACATATGA+AGG 0.537947 4.1:+48091875 MS.gene61600:CDS
AGTATTGGTAGTAACAGGAT+TGG 0.539477 4.1:-48087941 None:intergenic
AGGCAGAGACAACTTCTTGA+TGG 0.540615 4.1:-48087657 None:intergenic
TTGAGTATAATCAAGTGTAA+TGG 0.545850 4.1:-48092086 None:intergenic
TAGGTAGCAACAACAAAGAT+GGG 0.547237 4.1:+48092437 MS.gene61600:CDS
AAAGGAAATTTGTTGATGCT+GGG 0.547546 4.1:+48090631 MS.gene61600:CDS
AGATTGATCACTACTAGTAT+TGG 0.549551 4.1:-48087956 None:intergenic
AGATTACAATTACATGCGAA+TGG 0.550976 4.1:+48090377 MS.gene61600:CDS
TGTAAGGTTAAGGAAGTCAA+AGG 0.554949 4.1:+48090423 MS.gene61600:CDS
TGGAGGACCTAATATTAACT+AGG 0.555671 4.1:-48087558 None:intergenic
GTTAGTCCTAAGTAAGAATG+AGG 0.558419 4.1:+48090878 MS.gene61600:CDS
GTATTGGTAGTAACAGGATT+GGG 0.564404 4.1:-48087940 None:intergenic
TTATTGTGTTAGATCACTGA+TGG 0.564668 4.1:+48091066 MS.gene61600:intron
AATTGAGAATGATGGAGAGT+TGG 0.565162 4.1:+48090710 MS.gene61600:CDS
ATGATCCTTGTCGGGGACAG+AGG 0.567680 4.1:-48087677 None:intergenic
AAAATTTGGATTAGCAGCAA+TGG 0.568779 4.1:-48092284 None:intergenic
ACTTAGTCCCAACGAAAACA+TGG 0.569432 4.1:+48087510 MS.gene61600:CDS
GTCGCAAAAGGTAATAACAA+TGG 0.570392 4.1:+48092406 MS.gene61600:CDS
TTGAGAGATCAGAGAAGCTG+AGG 0.571353 4.1:-48092179 None:intergenic
GTATAATCAAGTGTAATGGT+TGG 0.576480 4.1:-48092082 None:intergenic
GTTGGTGCAAAGGCAATGTA+GGG 0.584702 4.1:+48090728 MS.gene61600:CDS
TAGCAACAACAAAGATGGGA+AGG 0.588579 4.1:+48092441 MS.gene61600:CDS
TACTAATGCTGAGACTGTGA+TGG 0.589292 4.1:+48090764 MS.gene61600:CDS
CAATACTTGAAGAACAAGGA+AGG 0.589537 4.1:-48092033 None:intergenic
AAGTGTAATGGTTGGAAATG+GGG 0.590397 4.1:-48092074 None:intergenic
ATGATGGAGAGTTGGTGCAA+AGG 0.595504 4.1:+48090718 MS.gene61600:CDS
TTCAAACTTAACAGGTACAA+AGG 0.596299 4.1:+48091834 MS.gene61600:intron
AGAAGACAAGAGAACTAAGA+GGG 0.598740 4.1:+48088008 MS.gene61600:CDS
ATCAGCGTTGAAAAGCTTCG+AGG 0.603132 4.1:+48090842 MS.gene61600:CDS
AATACTTGAAGAACAAGGAA+GGG 0.605302 4.1:-48092032 None:intergenic
ATGGTGGAGTACTGGTGCCA+AGG 0.608936 4.1:+48090493 MS.gene61600:CDS
TATCGTTGCAGCATGGCCCG+TGG 0.614367 4.1:+48091150 MS.gene61600:CDS
TTCATTAGATGAGATTGGAG+AGG 0.619862 4.1:-48087593 None:intergenic
AGATCACTGATGGATGTCAA+TGG 0.621939 4.1:+48091076 MS.gene61600:intron
ATACTTGAAGAACAAGGAAG+GGG 0.623529 4.1:-48092031 None:intergenic
TGGCTGCTGCAGGTAAAGGG+TGG 0.624702 4.1:-48091907 None:intergenic
AGCGTATTATCGTTGCAGCA+TGG 0.651842 4.1:+48091143 MS.gene61600:CDS
TGTTAATGTTGAAAATGTTG+AGG 0.658284 4.1:+48090902 MS.gene61600:CDS
AGACAAGAGAACTAAGAGGG+AGG 0.677564 4.1:+48088011 MS.gene61600:CDS
AATCTCCAACTACTCCACAA+AGG 0.678231 4.1:+48092107 MS.gene61600:CDS
TATGAATATGATCCTTGTCG+GGG 0.678269 4.1:-48087684 None:intergenic
AGCGTTGAAAAGCTTCGAGG+AGG 0.678382 4.1:+48090845 MS.gene61600:CDS
GTTGCAATACTTGAAGAACA+AGG 0.694121 4.1:-48092037 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTGAAAATAATAATAATAA+TGG + chr4.1:48092376-48092395 MS.gene61600:CDS 10.0%
!! CTGAAAATAATAATAATAAT+GGG + chr4.1:48092377-48092396 MS.gene61600:CDS 10.0%
!! TATAGTTGAAAAAATTAAAA+TGG - chr4.1:48088239-48088258 None:intergenic 10.0%
!! TGAATAAATAAATTCAATTT+AGG - chr4.1:48088705-48088724 None:intergenic 10.0%
!! AAATATCATCACATAAAAAA+TGG - chr4.1:48090255-48090274 None:intergenic 15.0%
!! AATAATCGAATTCAATTTAA+TGG + chr4.1:48090174-48090193 MS.gene61600:intron 15.0%
!! AATACGTAGAAAAAAATAAT+GGG - chr4.1:48087798-48087817 None:intergenic 15.0%
!! ATTATCTATGGTTAAAATAT+AGG - chr4.1:48088420-48088439 None:intergenic 15.0%
!! GAAAACATAATTATTATCTA+TGG - chr4.1:48088432-48088451 None:intergenic 15.0%
!! TAATACGTAGAAAAAAATAA+TGG - chr4.1:48087799-48087818 None:intergenic 15.0%
!! TGTACTATACTTATAAATAT+AGG - chr4.1:48088356-48088375 None:intergenic 15.0%
!! TTATCTATGGTTAAAATATA+GGG - chr4.1:48088419-48088438 None:intergenic 15.0%
!!! ATATATATAATTTTCTTGGT+TGG + chr4.1:48088294-48088313 MS.gene61600:intron 15.0%
!!! ATGCATATTTAAGTTTTTAA+TGG - chr4.1:48091641-48091660 None:intergenic 15.0%
!!! ATTTTTTTCTCTCTTTTATT+TGG + chr4.1:48088641-48088660 MS.gene61600:intron 15.0%
!!! CACTTAACAAATTTTTTTAA+CGG + chr4.1:48089755-48089774 MS.gene61600:intron 15.0%
!!! TAGAATATTTTTATGTGATT+TGG + chr4.1:48090035-48090054 MS.gene61600:intron 15.0%
!! AAAAAATTAAAATGGAAGTG+AGG - chr4.1:48088231-48088250 None:intergenic 20.0%
!! AAAAATTAAAATGGAAGTGA+GGG - chr4.1:48088230-48088249 None:intergenic 20.0%
!! AATAACAATGGAAATATCAT+AGG + chr4.1:48092418-48092437 MS.gene61600:CDS 20.0%
!! AATATCATCAATTTACTGTT+AGG + chr4.1:48089039-48089058 MS.gene61600:intron 20.0%
!! ACTAAAGTGAAAGTAAAATA+TGG - chr4.1:48089694-48089713 None:intergenic 20.0%
!! ATATTTGTTTCACAAATAAG+AGG - chr4.1:48090063-48090082 None:intergenic 20.0%
!! ATGACTTAATAGTTATGTTA+TGG + chr4.1:48089364-48089383 MS.gene61600:intron 20.0%
!! CTAAAGTGAAAGTAAAAAAA+TGG + chr4.1:48088918-48088937 MS.gene61600:intron 20.0%
!! TAGTTAAAATACTAATGAAG+TGG + chr4.1:48091778-48091797 MS.gene61600:intron 20.0%
!! TATCTATGGTTAAAATATAG+GGG - chr4.1:48088418-48088437 None:intergenic 20.0%
!! TGCTTATAATTTAGCAATTT+CGG - chr4.1:48089232-48089251 None:intergenic 20.0%
!!! AAACATTTGTTATCAAACTA+TGG + chr4.1:48089387-48089406 MS.gene61600:intron 20.0%
!!! AAGTAAAAAAATGGTCATTT+TGG + chr4.1:48088927-48088946 MS.gene61600:intron 20.0%
!!! AATAATGGGATATTGAATTA+TGG - chr4.1:48087784-48087803 None:intergenic 20.0%
!!! AATAGAGTTTGATTTCTTTA+AGG + chr4.1:48087621-48087640 MS.gene61600:CDS 20.0%
!!! ATGATATTGATTTTTGATTC+AGG - chr4.1:48089027-48089046 None:intergenic 20.0%
!!! ATTTTTTTCCTTCCATTTAT+TGG + chr4.1:48088083-48088102 MS.gene61600:intron 20.0%
!!! CACTTAACAGATTTTTTTAA+CGG - chr4.1:48088856-48088875 None:intergenic 20.0%
!!! TGATATTGATTTTTGATTCA+GGG - chr4.1:48089026-48089045 None:intergenic 20.0%
!!! TTATGATCATCTTGATAATT+TGG + chr4.1:48087885-48087904 MS.gene61600:intron 20.0%
! AAAAAGAGAATTGAGAATGA+TGG + chr4.1:48090702-48090721 MS.gene61600:CDS 25.0%
! AAAGTAAAATATGGTCACTT+TGG - chr4.1:48089685-48089704 None:intergenic 25.0%
! AAATTTCGTGTTTAATGTCA+GGG + chr4.1:48089514-48089533 MS.gene61600:intron 25.0%
! AACTCAAGGTTAATATTAAC+TGG - chr4.1:48087487-48087506 None:intergenic 25.0%
! AAGATAATGATTAAAGACCA+AGG - chr4.1:48091405-48091424 None:intergenic 25.0%
! AATAAGGTTATGGAAGTTAA+AGG + chr4.1:48090543-48090562 MS.gene61600:CDS 25.0%
! AATATCCTCAATTTACTGTT+AGG - chr4.1:48088986-48088967 None:intergenic 25.0%
! ACCTAATATTAACTAGGAAA+GGG - chr4.1:48087555-48087574 None:intergenic 25.0%
! ACTAAAAAACATCACATAGT+TGG - chr4.1:48089198-48089217 None:intergenic 25.0%
! ACTAATGGGATATTGAATTA+TGG - chr4.1:48087753-48087772 None:intergenic 25.0%
! CTAAATTATAAGCACAATTG+TGG + chr4.1:48089238-48089257 MS.gene61600:intron 25.0%
! GATAAAATTGCAGGAAAATT+TGG - chr4.1:48092301-48092320 None:intergenic 25.0%
! TAAAAGTTTGCACCATATTT+GGG - chr4.1:48089323-48089342 None:intergenic 25.0%
! TAAGTTCATTAAATTCAGCT+AGG - chr4.1:48088051-48088070 None:intergenic 25.0%
! TAATTTCGTGTTTACTATCA+GGG - chr4.1:48089098-48089117 None:intergenic 25.0%
! TACTATAGTTCAAACTTAAC+AGG + chr4.1:48091826-48091845 MS.gene61600:intron 25.0%
! TAGAACACTATTAACATGAT+GGG + chr4.1:48090127-48090146 MS.gene61600:intron 25.0%
! TGATAGTAAACACGAAATTA+GGG + chr4.1:48089098-48089117 MS.gene61600:intron 25.0%
! TGTTAATGTTGAAAATGTTG+AGG + chr4.1:48090902-48090921 MS.gene61600:CDS 25.0%
! TTAAAAGTTTGCACCATATT+TGG - chr4.1:48089324-48089343 None:intergenic 25.0%
! TTAGAACACTATTAACATGA+TGG + chr4.1:48090126-48090145 MS.gene61600:intron 25.0%
! TTGAATTATATGCCCAAATA+TGG + chr4.1:48089308-48089327 MS.gene61600:intron 25.0%
! TTGAGTATAATCAAGTGTAA+TGG - chr4.1:48092089-48092108 None:intergenic 25.0%
! TTGTATTTAATCTTGAGTCA+GGG + chr4.1:48089821-48089840 MS.gene61600:intron 25.0%
! TTTGTATTTAATCTTGAGTC+AGG + chr4.1:48089820-48089839 MS.gene61600:intron 25.0%
!! AAAGGAAAAGAAGTTTTTGA+TGG + chr4.1:48090441-48090460 MS.gene61600:CDS 25.0%
!! CATCACATAAAAAATGGATT+TGG - chr4.1:48090249-48090268 None:intergenic 25.0%
!! CTTAAATATGCATTGATGTT+TGG + chr4.1:48091648-48091667 MS.gene61600:intron 25.0%
!! GAAGTTTATGATGGAAAATT+TGG + chr4.1:48090570-48090589 MS.gene61600:CDS 25.0%
!!! AAATTTGTTAAGTGATGATG+TGG - chr4.1:48089749-48089768 None:intergenic 25.0%
!!! AACAAATTTTTTTAACGGCA+AGG + chr4.1:48089760-48089779 MS.gene61600:intron 25.0%
!!! AATTTTGATTGGTTCTGATT+AGG - chr4.1:48092208-48092227 None:intergenic 25.0%
!!! ACACTTTAAGATACTTACAA+TGG - chr4.1:48090976-48090995 None:intergenic 25.0%
!!! ATTTTGATCCAATAAATGGA+AGG - chr4.1:48088094-48088113 None:intergenic 25.0%
!!! CTCAATTTTGATCCAATAAA+TGG - chr4.1:48088098-48088117 None:intergenic 25.0%
!!! GCAAACTTTTAATTACTCTA+TGG + chr4.1:48089332-48089351 MS.gene61600:intron 25.0%
!!! TATAATTTTCTTGGTTGGTT+TGG + chr4.1:48088299-48088318 MS.gene61600:intron 25.0%
!!! TATTTTTTTCTTCAACAGCT+TGG + chr4.1:48087916-48087935 MS.gene61600:intron 25.0%
AAAAAAATAGCTGAGAATGG+TGG + chr4.1:48090477-48090496 MS.gene61600:CDS 30.0%
AAAAAGAGAATGAAGAATGG+TGG + chr4.1:48090597-48090616 MS.gene61600:CDS 30.0%
AAAGGACAAGAAGTTTATGA+TGG + chr4.1:48090561-48090580 MS.gene61600:CDS 30.0%
AATACTTGAAGAACAAGGAA+GGG - chr4.1:48092035-48092054 None:intergenic 30.0%
AATTTGATATACATTGCACG+AGG + chr4.1:48091488-48091507 MS.gene61600:intron 30.0%
ACAGTAAGTATACACAATCA+GGG - chr4.1:48089066-48089085 None:intergenic 30.0%
ACTATGAATATGATCCTTGT+CGG - chr4.1:48087689-48087708 None:intergenic 30.0%
AGAACACTATTAACATGATG+GGG + chr4.1:48090128-48090147 MS.gene61600:intron 30.0%
AGATTACAATTACATGCGAA+TGG + chr4.1:48090377-48090396 MS.gene61600:CDS 30.0%
AGATTGATCACTACTAGTAT+TGG - chr4.1:48087959-48087978 None:intergenic 30.0%
ATCAGCTACTAATAAGGTTA+TGG + chr4.1:48090533-48090552 MS.gene61600:CDS 30.0%
ATTCACGTAGACAACAATAT+GGG + chr4.1:48088198-48088217 MS.gene61600:intron 30.0%
CAACAAACTCAAATCCAAAA+TGG + chr4.1:48091738-48091757 MS.gene61600:intron 30.0%
CATCCAATGATATGTTATCA+CGG + chr4.1:48088503-48088522 MS.gene61600:intron 30.0%
CCAGAAAATTTGAGTAGTAA+GGG - chr4.1:48089912-48089931 None:intergenic 30.0%
CCTAACTGATCTTTACTTAT+AGG - chr4.1:48090822-48090841 None:intergenic 30.0%
CCTATAAGTAAAGATCAGTT+AGG + chr4.1:48090819-48090838 MS.gene61600:CDS 30.0%
CGAAATTTCACTAAGATCTT+TGG - chr4.1:48089502-48089521 None:intergenic 30.0%
CTAATTTCGTGTTTACTATC+AGG - chr4.1:48089099-48089118 None:intergenic 30.0%
CTGATAGTAAACACGAAATT+AGG + chr4.1:48089097-48089116 MS.gene61600:intron 30.0%
CTTGTTTCATTAGATGAGAT+TGG - chr4.1:48087601-48087620 None:intergenic 30.0%
GAAATTTCGTGTTTAATGTC+AGG + chr4.1:48089513-48089532 MS.gene61600:intron 30.0%
GACCTAATATTAACTAGGAA+AGG - chr4.1:48087556-48087575 None:intergenic 30.0%
GAGAAAAAAATAGCTGAGAA+TGG + chr4.1:48090474-48090493 MS.gene61600:CDS 30.0%
GAGAAAAAGAGAATGAAGAA+TGG + chr4.1:48090594-48090613 MS.gene61600:CDS 30.0%
GATAGTAAACACGAAATTAG+GGG + chr4.1:48089099-48089118 MS.gene61600:intron 30.0%
GTATAATCAAGTGTAATGGT+TGG - chr4.1:48092085-48092104 None:intergenic 30.0%
GTTAAAATATAGGGGAGAAA+TGG - chr4.1:48088410-48088429 None:intergenic 30.0%
GTTTCTGTCCATATCATATA+GGG - chr4.1:48089947-48089966 None:intergenic 30.0%
TAACATCCTCATTCTTACTT+AGG - chr4.1:48090887-48090906 None:intergenic 30.0%
TAATGCGAAAGCAATCATTA+AGG - chr4.1:48091256-48091275 None:intergenic 30.0%
TAGTAGTGATCAATCTATGA+TGG + chr4.1:48087963-48087982 MS.gene61600:CDS 30.0%
TAGTGATACATCATCTTTGT+TGG + chr4.1:48087705-48087724 MS.gene61600:CDS 30.0%
TCAGCAAAAACAAAATGCAT+TGG - chr4.1:48090155-48090174 None:intergenic 30.0%
TCCCTTTCCTAGTTAATATT+AGG + chr4.1:48087551-48087570 MS.gene61600:CDS 30.0%
TTACCGTGATAACATATCAT+TGG - chr4.1:48088509-48088528 None:intergenic 30.0%
TTATTGTGTTAGATCACTGA+TGG + chr4.1:48091066-48091085 MS.gene61600:intron 30.0%
TTCAAACTTAACAGGTACAA+AGG + chr4.1:48091834-48091853 MS.gene61600:intron 30.0%
TTGTATTTAATCCTGAGTCA+GGG - chr4.1:48088790-48088809 None:intergenic 30.0%
TTTCTGTCCATATCATATAG+GGG - chr4.1:48089946-48089965 None:intergenic 30.0%
TTTGTATTTAATCCTGAGTC+AGG - chr4.1:48088791-48088810 None:intergenic 30.0%
! AAATCTGTTAAGTGATGATG+TGG + chr4.1:48088862-48088881 MS.gene61600:intron 30.0%
! AGAAGAAAGTTACCTGTTTT+CGG - chr4.1:48091185-48091204 None:intergenic 30.0%
! CATGTTTCTATGCTAGAAAA+TGG + chr4.1:48091559-48091578 MS.gene61600:intron 30.0%
! CCTTACTACTCAAATTTTCT+GGG + chr4.1:48089910-48089929 MS.gene61600:intron 30.0%
! TATAGGTTTTCTCATTGATG+AGG - chr4.1:48090805-48090824 None:intergenic 30.0%
! TCTATGCTAGAAAATGGATT+TGG + chr4.1:48091565-48091584 MS.gene61600:intron 30.0%
! TGTTTCTGTCCATATCATAT+AGG - chr4.1:48089948-48089967 None:intergenic 30.0%
! TTCATTGAACTGTTTTCAGA+TGG + chr4.1:48090278-48090297 MS.gene61600:intron 30.0%
!! AAAAGGAAATTTGTTGATGC+TGG + chr4.1:48090630-48090649 MS.gene61600:CDS 30.0%
!! AAAATTTGGATTAGCAGCAA+TGG - chr4.1:48092287-48092306 None:intergenic 30.0%
!! AAAGGAAATTTGTTGATGCT+GGG + chr4.1:48090631-48090650 MS.gene61600:CDS 30.0%
!! AAGGGACACAAAATTTTGAT+TGG - chr4.1:48092219-48092238 None:intergenic 30.0%
!! AAGGTCAAAGAAGTGTTTAA+TGG + chr4.1:48090666-48090685 MS.gene61600:CDS 30.0%
!! GATAATACGCTTTAGGAAAT+GGG - chr4.1:48091134-48091153 None:intergenic 30.0%
!! TGTCTATATTTGATAATGCC+TGG + chr4.1:48088142-48088161 MS.gene61600:intron 30.0%
!!! AACAGATTTTTTTAACGGCA+GGG - chr4.1:48088851-48088870 None:intergenic 30.0%
!!! ACATGCATATTTTAAGACCT+TGG + chr4.1:48091385-48091404 MS.gene61600:intron 30.0%
!!! AGGATATTGATTTTCGATTC+AGG + chr4.1:48089585-48089604 MS.gene61600:intron 30.0%
!!! AGGATATTGATTTTCGATTC+AGG - chr4.1:48089604-48089585 None:intergenic 30.0%
!!! AGTTGTTTTTGCCATTTCTT+TGG - chr4.1:48091930-48091949 None:intergenic 30.0%
!!! GGATATTGATTTTCGATTCA+GGG + chr4.1:48089586-48089605 MS.gene61600:intron 30.0%
!!! GGATATTGATTTTCGATTCA+GGG - chr4.1:48089605-48089586 None:intergenic 30.0%
!!! GTATTTTAACTAACCTAGCT+AGG - chr4.1:48091770-48091789 None:intergenic 30.0%
!!! TAACAGATTTTTTTAACGGC+AGG - chr4.1:48088852-48088871 None:intergenic 30.0%
AAGTGTAATGGTTGGAAATG+GGG - chr4.1:48092077-48092096 None:intergenic 35.0%
ACAGTAAGTATACACAGTCA+GGG - chr4.1:48088994-48089013 None:intergenic 35.0%
ACATCAACAACAAGCAATGA+TGG + chr4.1:48091977-48091996 MS.gene61600:CDS 35.0%
ACTGACATACACATAAACAC+TGG - chr4.1:48090010-48090029 None:intergenic 35.0%
AGAAGACAAGAGAACTAAGA+GGG + chr4.1:48088008-48088027 MS.gene61600:CDS 35.0%
AGAGTAGCTGATAAAATTGC+AGG - chr4.1:48092310-48092329 None:intergenic 35.0%
AGGGATCTAACAGTAAATTG+AGG + chr4.1:48089637-48089656 MS.gene61600:intron 35.0%
AGGGATCTAACAGTAAATTG+AGG - chr4.1:48089656-48089637 None:intergenic 35.0%
ATACTTGAAGAACAAGGAAG+GGG - chr4.1:48092034-48092053 None:intergenic 35.0%
ATAGGTAGCAACAACAAAGA+TGG + chr4.1:48092436-48092455 MS.gene61600:CDS 35.0%
ATAGTAAGTACACACAGTCA+GGG + chr4.1:48089546-48089565 MS.gene61600:intron 35.0%
ATATCATATAGGGGCAATGA+CGG - chr4.1:48089937-48089956 None:intergenic 35.0%
ATTATGGTCACTCACACTAA+TGG - chr4.1:48087768-48087787 None:intergenic 35.0%
CAAGTGTAATGGTTGGAAAT+GGG - chr4.1:48092078-48092097 None:intergenic 35.0%
CAATACTTGAAGAACAAGGA+AGG - chr4.1:48092036-48092055 None:intergenic 35.0%
CCAAGGAAAATTATGGATCT+TGG + chr4.1:48090510-48090529 MS.gene61600:CDS 35.0%
CCCAGAAAATTTGAGTAGTA+AGG - chr4.1:48089913-48089932 None:intergenic 35.0%
CGTGATAACATATCATTGGA+TGG - chr4.1:48088505-48088524 None:intergenic 35.0%
CTATGAATATGATCCTTGTC+GGG - chr4.1:48087688-48087707 None:intergenic 35.0%
GAAAGTGATGCAAGATTGTA+AGG + chr4.1:48090407-48090426 MS.gene61600:CDS 35.0%
GACAGTAAGTATACACAATC+AGG - chr4.1:48089067-48089086 None:intergenic 35.0%
GATGCAAGATTGTAAGGTTA+AGG + chr4.1:48090413-48090432 MS.gene61600:CDS 35.0%
GATTCACGTAGACAACAATA+TGG + chr4.1:48088197-48088216 MS.gene61600:intron 35.0%
GTCGCAAAAGGTAATAACAA+TGG + chr4.1:48092406-48092425 MS.gene61600:CDS 35.0%
GTGTATACTTACTGTCAGTT+AGG + chr4.1:48088999-48089018 MS.gene61600:intron 35.0%
GTGTGTACTTACTATCAGTT+AGG - chr4.1:48089541-48089560 None:intergenic 35.0%
GTTAGTCCTAAGTAAGAATG+AGG + chr4.1:48090878-48090897 MS.gene61600:CDS 35.0%
GTTCTCTTGTCTTCTGAATT+AGG - chr4.1:48088003-48088022 None:intergenic 35.0%
GTTGCAATACTTGAAGAACA+AGG - chr4.1:48092040-48092059 None:intergenic 35.0%
GTTGTCATCACAACATATGA+AGG + chr4.1:48091875-48091894 MS.gene61600:CDS 35.0%
TAGGTAGCAACAACAAAGAT+GGG + chr4.1:48092437-48092456 MS.gene61600:CDS 35.0%
TATGAATATGATCCTTGTCG+GGG - chr4.1:48087687-48087706 None:intergenic 35.0%
TCAAGTGTAATGGTTGGAAA+TGG - chr4.1:48092079-48092098 None:intergenic 35.0%
TCTTGGATCAGCTACTAATA+AGG + chr4.1:48090527-48090546 MS.gene61600:CDS 35.0%
TGGAGGACCTAATATTAACT+AGG - chr4.1:48087561-48087580 None:intergenic 35.0%
TGTAAGGTTAAGGAAGTCAA+AGG + chr4.1:48090423-48090442 MS.gene61600:CDS 35.0%
TTATGGTCACTCACACTAAT+GGG - chr4.1:48087767-48087786 None:intergenic 35.0%
TTCATTAGATGAGATTGGAG+AGG - chr4.1:48087596-48087615 None:intergenic 35.0%
TTGATGTAGCAACACATCAT+TGG + chr4.1:48088569-48088588 MS.gene61600:intron 35.0%
TTGTGTCCCTTCAAAACTAT+TGG + chr4.1:48092228-48092247 MS.gene61600:CDS 35.0%
TTTCAGATGGCTATTCTTCA+AGG + chr4.1:48090291-48090310 MS.gene61600:intron 35.0%
! AAAGGAGTTTGAAACTGATC+TGG - chr4.1:48092136-48092155 None:intergenic 35.0%
! AAGGAGTTTGAAACTGATCT+GGG - chr4.1:48092135-48092154 None:intergenic 35.0%
! AATTGAGAATGATGGAGAGT+TGG + chr4.1:48090710-48090729 MS.gene61600:CDS 35.0%
! ATGCTACTTACTCAACACTA+AGG - chr4.1:48089462-48089481 None:intergenic 35.0%
! ATGGTGGAGAATTAGTGAAA+AGG + chr4.1:48090613-48090632 MS.gene61600:CDS 35.0%
! CCAAGATCCATAATTTTCCT+TGG - chr4.1:48090513-48090532 None:intergenic 35.0%
! CCCTTACTACTCAAATTTTC+TGG + chr4.1:48089909-48089928 MS.gene61600:intron 35.0%
! GTATTGGTAGTAACAGGATT+GGG - chr4.1:48087943-48087962 None:intergenic 35.0%
! TAAATGCATGGATTGCAGAA+TGG - chr4.1:48091598-48091617 None:intergenic 35.0%
!! ACGTTTTATTCGCATGTGAT+GGG + chr4.1:48090221-48090240 MS.gene61600:intron 35.0%
!! AGAAACATGAGCTTTGAAAG+TGG - chr4.1:48091548-48091567 None:intergenic 35.0%
!! AGTATTGGTAGTAACAGGAT+TGG - chr4.1:48087944-48087963 None:intergenic 35.0%
!! CGATAATACGCTTTAGGAAA+TGG - chr4.1:48091135-48091154 None:intergenic 35.0%
!! CTACTAGTATTGGTAGTAAC+AGG - chr4.1:48087949-48087968 None:intergenic 35.0%
!!! GAACTGCCAATAGTTTTGAA+GGG - chr4.1:48092237-48092256 None:intergenic 35.0%
AAAATGGTAGCTACCTAGCT+AGG + chr4.1:48091754-48091773 MS.gene61600:intron 40.0%
AATCTCCAACTACTCCACAA+AGG + chr4.1:48092107-48092126 MS.gene61600:CDS 40.0%
AATGGGAACAATGTCGCAAA+AGG + chr4.1:48092394-48092413 MS.gene61600:CDS 40.0%
ACAGTAAGTACACACAGTCA+GGG + chr4.1:48089618-48089637 MS.gene61600:intron 40.0%
ACATGCGAATAAAACGTGTC+AGG - chr4.1:48090218-48090237 None:intergenic 40.0%
ACTTAGTCCCAACGAAAACA+TGG + chr4.1:48087510-48087529 MS.gene61600:CDS 40.0%
AGGAATTTGCAGAAGTCTGA+CGG - chr4.1:48092162-48092181 None:intergenic 40.0%
AGGGACCTAACAGTAAATTG+AGG + chr4.1:48089565-48089584 MS.gene61600:intron 40.0%
ATCTTTCATGCCAACTCCAA+GGG + chr4.1:48089164-48089183 MS.gene61600:intron 40.0%
ATGGTCGTTGTATCGAAGAT+TGG - chr4.1:48091679-48091698 None:intergenic 40.0%
ATTCGAGTGTCACACGTTAA+CGG - chr4.1:48088170-48088189 None:intergenic 40.0%
CAGAAGACAAGAGAACTAAG+AGG + chr4.1:48088007-48088026 MS.gene61600:CDS 40.0%
CATGCGAATAAAACGTGTCA+GGG - chr4.1:48090217-48090236 None:intergenic 40.0%
CCATATAGTAAGTACGTCGA+TGG - chr4.1:48091698-48091717 None:intergenic 40.0%
CCATCGACGTACTTACTATA+TGG + chr4.1:48091695-48091714 MS.gene61600:intron 40.0%
CTGCAACGATAATACGCTTT+AGG - chr4.1:48091141-48091160 None:intergenic 40.0%
GACAGTAAGTATACACAGTC+AGG - chr4.1:48088995-48089014 None:intergenic 40.0%
GATAGTAAGTACACACAGTC+AGG + chr4.1:48089545-48089564 MS.gene61600:intron 40.0%
GCTACTCTTACTTCCATGAT+TGG + chr4.1:48092322-48092341 MS.gene61600:CDS 40.0%
GGAGAAATGGATGACACTAA+TGG - chr4.1:48088397-48088416 None:intergenic 40.0%
GGATGTCAATGGAGAAAGTA+TGG + chr4.1:48091087-48091106 MS.gene61600:CDS 40.0%
GGCAAGGACTAAAGTGATAA+CGG + chr4.1:48089776-48089795 MS.gene61600:intron 40.0%
GTCATTGCCCCTATATGATA+TGG + chr4.1:48089936-48089955 MS.gene61600:intron 40.0%
GTGTATACTTACTGTCAGTC+AGG + chr4.1:48089071-48089090 MS.gene61600:intron 40.0%
GTGTGTACTTACTGTCAGTT+AGG - chr4.1:48089613-48089632 None:intergenic 40.0%
TAACGTGTGACACTCGAATA+GGG + chr4.1:48088171-48088190 MS.gene61600:intron 40.0%
TACTAATGCTGAGACTGTGA+TGG + chr4.1:48090764-48090783 MS.gene61600:CDS 40.0%
TAGATGAGATTGGAGAGGTT+TGG - chr4.1:48087591-48087610 None:intergenic 40.0%
TAGCAACAACAAAGATGGGA+AGG + chr4.1:48092441-48092460 MS.gene61600:CDS 40.0%
TATCATATAGGGGCAATGAC+GGG - chr4.1:48089936-48089955 None:intergenic 40.0%
TGGCAGTTCCAAATATTGCT+CGG + chr4.1:48092248-48092267 MS.gene61600:CDS 40.0%
TGGGACTAAGTTTCAACTCA+AGG - chr4.1:48087501-48087520 None:intergenic 40.0%
TTAACGTGTGACACTCGAAT+AGG + chr4.1:48088170-48088189 MS.gene61600:intron 40.0%
TTTAATGGCCATCAACGTAC+TGG - chr4.1:48091626-48091645 None:intergenic 40.0%
! AAACATCACATAGTTGGCCT+CGG - chr4.1:48089192-48089211 None:intergenic 40.0%
! ACTGGTGCCAAGGAAAATTA+TGG + chr4.1:48090503-48090522 MS.gene61600:CDS 40.0%
! AGATCACTGATGGATGTCAA+TGG + chr4.1:48091076-48091095 MS.gene61600:intron 40.0%
! ATAACGGAAGTGTAGAGTCA+GGG + chr4.1:48089792-48089811 MS.gene61600:intron 40.0%
! ATAACGGAAGTGTAGAGTCA+GGG - chr4.1:48089811-48089792 None:intergenic 40.0%
! CAAATAGTCACTTTAGTCCC+TGG + chr4.1:48088739-48088758 MS.gene61600:intron 40.0%
! GTAGCATCCATGTTTTCGTT+GGG - chr4.1:48087520-48087539 None:intergenic 40.0%
! TAAAATGGAAGTGAGGGCAT+TGG - chr4.1:48088224-48088243 None:intergenic 40.0%
! TAGCTAGGTAGCTACCATTT+TGG - chr4.1:48091755-48091774 None:intergenic 40.0%
! TGTAGCATCCATGTTTTCGT+TGG - chr4.1:48087521-48087540 None:intergenic 40.0%
!! CACGTTTTATTCGCATGTGA+TGG + chr4.1:48090220-48090239 MS.gene61600:intron 40.0%
!! GAAATTTGTTGATGCTGGGT+TGG + chr4.1:48090635-48090654 MS.gene61600:CDS 40.0%
!! GTTGGTTTGGTTTGTAGCTT+TGG + chr4.1:48088312-48088331 MS.gene61600:intron 40.0%
!!! AGAGGTTTGGTTTTCATTGG+AGG - chr4.1:48087578-48087597 None:intergenic 40.0%
!!! GGAACTGCCAATAGTTTTGA+AGG - chr4.1:48092238-48092257 None:intergenic 40.0%
!!! TGGAGAGGTTTGGTTTTCAT+TGG - chr4.1:48087581-48087600 None:intergenic 40.0%
AACTGATCTGGGTTCCTTTG+TGG - chr4.1:48092124-48092143 None:intergenic 45.0%
AGACAAGAGAACTAAGAGGG+AGG + chr4.1:48088011-48088030 MS.gene61600:CDS 45.0%
AGCGTATTATCGTTGCAGCA+TGG + chr4.1:48091143-48091162 MS.gene61600:CDS 45.0%
AGGCAGAGACAACTTCTTGA+TGG - chr4.1:48087660-48087679 None:intergenic 45.0%
CATCTTTCATGCCAACTCCA+AGG + chr4.1:48089163-48089182 MS.gene61600:intron 45.0%
GACAGTAAGTACACACAGTC+AGG + chr4.1:48089617-48089636 MS.gene61600:intron 45.0%
GCAGAAGTCTGACGGTTTAA+AGG - chr4.1:48092154-48092173 None:intergenic 45.0%
GGCAGGGACTAAAGTGATAA+CGG - chr4.1:48088835-48088854 None:intergenic 45.0%
GGCAGTTCCAAATATTGCTC+GGG + chr4.1:48092249-48092268 MS.gene61600:CDS 45.0%
GTTGGTGCAAAGGCAATGTA+GGG + chr4.1:48090728-48090747 MS.gene61600:CDS 45.0%
TGGCTGAGTATCACCAATCA+TGG - chr4.1:48092338-48092357 None:intergenic 45.0%
TTCGAGTGTCACACGTTAAC+GGG - chr4.1:48088169-48088188 None:intergenic 45.0%
TTGACTGCCCGAGCAATATT+TGG - chr4.1:48092259-48092278 None:intergenic 45.0%
TTGAGAGATCAGAGAAGCTG+AGG - chr4.1:48092182-48092201 None:intergenic 45.0%
! AAGGAGTATGACGTGTCACA+GGG + chr4.1:48088894-48088913 MS.gene61600:intron 45.0%
! AAGGAGTATGACGTGTCACA+GGG - chr4.1:48088913-48088894 None:intergenic 45.0%
! AGTTGGTGCAAAGGCAATGT+AGG + chr4.1:48090727-48090746 MS.gene61600:CDS 45.0%
! ATCAGCGTTGAAAAGCTTCG+AGG + chr4.1:48090842-48090861 MS.gene61600:CDS 45.0%
! GTAGCAGCAGTAGTGTTGTT+TGG - chr4.1:48092358-48092377 None:intergenic 45.0%
!! ATGATGGAGAGTTGGTGCAA+AGG + chr4.1:48090718-48090737 MS.gene61600:CDS 45.0%
!! GATAACGGAAGTGTAGAGTC+AGG + chr4.1:48089791-48089810 MS.gene61600:intron 45.0%
!! GATAACGGAAGTGTAGAGTC+AGG - chr4.1:48089810-48089791 None:intergenic 45.0%
!! TGCTGGGTTGGCTACTAATA+AGG + chr4.1:48090647-48090666 MS.gene61600:CDS 45.0%
!! TAAAATATATGTATTTATTA+TGG + chr4.1:48091214-48091233 MS.gene61600:intron 5.0%
!!! ATATATATATATAATTTTCT+TGG + chr4.1:48088290-48088309 MS.gene61600:intron 5.0%
ACCTGCAGCAGCCAAAGAAA+TGG + chr4.1:48091916-48091935 MS.gene61600:CDS 50.0%
CATGTCTGTGACTGCGATGT+AGG - chr4.1:48091370-48091389 None:intergenic 50.0%
CTTTGGCTGCTGCAGGTAAA+GGG - chr4.1:48091913-48091932 None:intergenic 50.0%
GATGATGTGGCATGCTGACA+AGG - chr4.1:48089736-48089755 None:intergenic 50.0%
GGGTTCCTTTGTGGAGTAGT+TGG - chr4.1:48092115-48092134 None:intergenic 50.0%
GTGTGACACTCGAATAGGGA+TGG + chr4.1:48088175-48088194 MS.gene61600:intron 50.0%
TCTTTGGCTGCTGCAGGTAA+AGG - chr4.1:48091914-48091933 None:intergenic 50.0%
TGGTTGCTCAGTCCGAAAAC+AGG + chr4.1:48091170-48091189 MS.gene61600:CDS 50.0%
TTACGCAGCCAGTACGTTGA+TGG + chr4.1:48091615-48091634 MS.gene61600:intron 50.0%
TTTGCACCTCGCTGTCACAT+AGG - chr4.1:48089848-48089867 None:intergenic 50.0%
! AAGCTTCGAGGAGGCTTTGA+AGG + chr4.1:48090854-48090873 MS.gene61600:CDS 50.0%
! AGCGTTGAAAAGCTTCGAGG+AGG + chr4.1:48090845-48090864 MS.gene61600:CDS 50.0%
! AGCTGAGAATGGTGGAGTAC+TGG + chr4.1:48090485-48090504 MS.gene61600:CDS 50.0%
! CAAGGAGTATGACGTGTCAC+AGG + chr4.1:48088893-48088912 MS.gene61600:intron 50.0%
! CAAGGAGTATGACGTGTCAC+AGG - chr4.1:48088912-48088893 None:intergenic 50.0%
! GTTTTCGGACTGAGCAACCA+CGG - chr4.1:48091170-48091189 None:intergenic 50.0%
! TTTTCGGACTGAGCAACCAC+GGG - chr4.1:48091169-48091188 None:intergenic 50.0%
!! GTACTGGCTGCGTAAATGCA+TGG - chr4.1:48091610-48091629 None:intergenic 50.0%
ATGATCCTTGTCGGGGACAG+AGG - chr4.1:48087680-48087699 None:intergenic 55.0%
GACAGCGAGGTGCAAAGTCA+GGG + chr4.1:48089852-48089871 MS.gene61600:intron 55.0%
GATGATGTGGCACGCTGACA+AGG + chr4.1:48088875-48088894 MS.gene61600:intron 55.0%
GCCATTTCTTTGGCTGCTGC+AGG - chr4.1:48091920-48091939 None:intergenic 55.0%
TCCTGAGTCAGGGACCTATG+TGG - chr4.1:48088780-48088799 None:intergenic 55.0%
TGACAGCGAGGTGCAAAGTC+AGG + chr4.1:48089851-48089870 MS.gene61600:intron 55.0%
! ATAGTTGGCCTCGGAACCCT+TGG - chr4.1:48089183-48089202 None:intergenic 55.0%
! TGTCACACGTTAACGGGTCC+AGG - chr4.1:48088163-48088182 None:intergenic 55.0%
!! ATGGTGGAGTACTGGTGCCA+AGG + chr4.1:48090493-48090512 MS.gene61600:CDS 55.0%
CAGGGACCTATGTGACAGCG+AGG + chr4.1:48089839-48089858 MS.gene61600:intron 60.0%
GCCACATAGGTCCCTGACTC+AGG + chr4.1:48088776-48088795 MS.gene61600:intron 60.0%
TATCGTTGCAGCATGGCCCG+TGG + chr4.1:48091150-48091169 MS.gene61600:CDS 60.0%
TCTGCACCTCGCTGCCACAT+AGG + chr4.1:48088763-48088782 MS.gene61600:intron 60.0%
TGCCAACTCCAAGGGTTCCG+AGG + chr4.1:48089172-48089191 MS.gene61600:intron 60.0%
TGGCTGCTGCAGGTAAAGGG+TGG - chr4.1:48091910-48091929 None:intergenic 60.0%
CAGGGACCTATGTGGCAGCG+AGG - chr4.1:48088772-48088791 None:intergenic 65.0%
CTCTGCCTCTGTCCCCGACA+AGG + chr4.1:48087672-48087691 MS.gene61600:CDS 65.0%
GGCCTCGGAACCCTTGGAGT+TGG - chr4.1:48089177-48089196 None:intergenic 65.0%
GGCAGCGAGGTGCAGAGCCA+GGG - chr4.1:48088759-48088778 None:intergenic 70.0%
TGGCAGCGAGGTGCAGAGCC+AGG - chr4.1:48088760-48088779 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 48087472 48092468 48087472 ID=MS.gene61600
chr4.1 mRNA 48087472 48092468 48087472 ID=MS.gene61600.t1;Parent=MS.gene61600
chr4.1 exon 48087472 48087741 48087472 ID=MS.gene61600.t1.exon1;Parent=MS.gene61600.t1
chr4.1 CDS 48087472 48087741 48087472 ID=cds.MS.gene61600.t1;Parent=MS.gene61600.t1
chr4.1 exon 48087934 48088032 48087934 ID=MS.gene61600.t1.exon2;Parent=MS.gene61600.t1
chr4.1 CDS 48087934 48088032 48087934 ID=cds.MS.gene61600.t1;Parent=MS.gene61600.t1
chr4.1 exon 48090297 48090977 48090297 ID=MS.gene61600.t1.exon3;Parent=MS.gene61600.t1
chr4.1 CDS 48090297 48090977 48090297 ID=cds.MS.gene61600.t1;Parent=MS.gene61600.t1
chr4.1 exon 48091078 48091191 48091078 ID=MS.gene61600.t1.exon4;Parent=MS.gene61600.t1
chr4.1 CDS 48091078 48091191 48091078 ID=cds.MS.gene61600.t1;Parent=MS.gene61600.t1
chr4.1 exon 48091848 48092468 48091848 ID=MS.gene61600.t1.exon5;Parent=MS.gene61600.t1
chr4.1 CDS 48091848 48092468 48091848 ID=cds.MS.gene61600.t1;Parent=MS.gene61600.t1
Gene Sequence

>MS.gene61600

ATGGATTCAAATCCAGTTAATATTAACCTTGAGTTGAAACTTAGTCCCAACGAAAACATGGATGCTACACATAGTACTATCCCTTTCCTAGTTAATATTAGGTCCTCCAATGAAAACCAAACCTCTCCAATCTCATCTAATGAAACAAGAATAGAGTTTGATTTCTTTAAGGACAACAACAATGACCATCAAGAAGTTGTCTCTGCCTCTGTCCCCGACAAGGATCATATTCATAGTGATACATCATCTTTGTTGGAACTCAAGCTGAGTGTGAGTGACCATAATTCAATATCCCATTAGTGTGAGTGACCATAATTCAATATCCCATTATTTTTTTCTACGTATTATATTAAATATATTGTTTTTAAATTTCATAGCTTTTGAATTTGTAATCGCAAACAATCATTTATTTTTTATGATCATCTTGATAATTTGGAGAATATGTATTTTTTTCTTCAACAGCTTGGTCCCAATCCTGTTACTACCAATACTAGTAGTGATCAATCTATGATGGATGACGACATGTCACCTAATTCAGAAGACAAGAGAACTAAGAGGGAGGTAATGTTAATGACACCTAGCTGAATTTAATGAACTTATATCTAATGAACATTTTTTTCCTTCCATTTATTGGATCAAAATTGAGTGATTTTATATATAGAATCGTCAATGTCTATATTTGATAATGCCTGGACCCGTTAACGTGTGACACTCGAATAGGGATGGATTCACGTAGACAACAATATGGGCCAATGCCCTCACTTCCATTTTAATTTTTTCAACTATATATATATATATATATATATATATATATATATATATATATATATAATTTTCTTGGTTGGTTTGGTTTGTAGCTTTGGTCTCTTACTCTTCTATGACCTATATTTATAAGTATAGTACAATATAATAATATATGCAACCATTAGTGTCATCCATTTCTCCCCTATATTTTAACCATAGATAATAATTATGTTTTCATATTGAATTTAACTAGTATATTTTGTCAACGTGCAGTAATTTTATACATCCATCCAATGATATGTTATCACGGTAATTAATGAATATCACAACTCATGTGTTTTCATATTTATTAATTGATGTAGCAACACATCATTGGATGAACGTGTAAAATAATTGTACAAAGTACACTAAATAATTTCTTTCATATTTTTTTCTCTCTTTTATTTGGTTTCATTTTTTAAAACATACTTTGTTTAATATGTTAAACCTAAATTGAATTTATTTATTCAATATTTTAAATGAGCAAATAGTCACTTTAGTCCCTGGCTCTGCACCTCGCTGCCACATAGGTCCCTGACTCAGGATTAAATACAAACAAGTCCCTGACTCTACACTTCCGTTATCACTTTAGTCCCTGCCGTTAAAAAAATCTGTTAAGTGATGATGTGGCACGCTGACAAGGAGTATGACGTGTCACAGGGACTAAAGTGAAAGTAAAAAAATGGTCATTTTGGTCCCTGAATCGAAAATCAATATCCTCAATTTACTGTTAGATCCCTGACTGTGTATACTTACTGTCAGTTAGGTCCCTGAATCAAAAATCAATATCATCAATTTACTGTTAGGTCCCTGATTGTGTATACTTACTGTCAGTCAGGTCCCTGATAGTAAACACGAAATTAGGGGTCAAAATCGAAATGCACATCTGAATGAACTACAAATGCTTACATCTTTCATGCCAACTCCAAGGGTTCCGAGGCCAACTATGTGATGTTTTTTAGTTTATTTATGTACCGAAATTGCTAAATTATAAGCACAATTGTGGTGCGATATTTTGTTTAATATTTTGCTGAATCATTATGTAATGACTTGTTGAATTATATGCCCAAATATGGTGCAAACTTTTAATTACTCTATGGTTGACATTAATGACTTAATAGTTATGTTATGGAAACATTTGTTATCAAACTATGGAATCATTTTTATAAGTGTTATAATAATATTTTAATATTTAGCACAAATACCTTAGTGTTGAGTAAGTAGCATGTTAAACTAACAATTTGCCAAAGATCTTAGTGAAATTTCGTGTTTAATGTCAGGGACCTAACTGATAGTAAGTACACACAGTCAGGGACCTAACAGTAAATTGAGGATATTGATTTTCGATTCAGGGACCTAACTGACAGTAAGTACACACAGTCAGGGATCTAACAGTAAATTGAGGATATTGATTTTCGATTCAGGGACCAAAGTGACCATATTTTACTTTCACTTTAGTCCCTGTGACACGTCATACTCCTTGTCAGCATGCCACATCATCACTTAACAAATTTTTTTAACGGCAAGGACTAAAGTGATAACGGAAGTGTAGAGTCAGGGACTTGTTTGTATTTAATCTTGAGTCAGGGACCTATGTGACAGCGAGGTGCAAAGTCAGGGATTAAAGTGACTATTTGCTCTATTTTAAATACTTCCCTTACTACTCAAATTTTCTGGGCCCGTCATTGCCCCTATATGATATGGACAGAAACAATTACATTTTAGTGTTGAGTGTCAGTTTTATTGTTTTGTCCAGTGTTTATGTGTATGTCAGTGTTTATAGAATATTTTTATGTGATTTGGATCCTCTTATTTGTGAAACAAATATGTGAGTTATGTCACTAAACTCACTATTAAAATGCATTGCACTCTTAGAACACTATTAACATGATGGGGTCCAATGCATTTTGTTTTTGCTGAATAATCGAATTCAATTTAATGGTGAAATGATTATTGTAACCCTGACACGTTTTATTCGCATGTGATGGGATCCAAATCCATTTTTTATGTGATGATATTTGAATTCATTGAACTGTTTTCAGATGGCTATTCTTCAAGGCGAGCTTAAACGAAAGAAAACAGAGAACTGTAGATTAAAATTGATATATGATCAGCTTAAAACAGATTACAATTACATGCGAATGGATTTCGAGAAAGTGATGCAAGATTGTAAGGTTAAGGAAGTCAAAGGAAAAGAAGTTTTTGATGGAAAAATTAAAGAGAAAAAAATAGCTGAGAATGGTGGAGTACTGGTGCCAAGGAAAATTATGGATCTTGGATCAGCTACTAATAAGGTTATGGAAGTTAAAGGACAAGAAGTTTATGATGGAAAATTTGGTGAGAAAAAGAGAATGAAGAATGGTGGAGAATTAGTGAAAAGGAAATTTGTTGATGCTGGGTTGGCTACTAATAAGGTCAAAGAAGTGTTTAATGGTAAATGTGAAAAGAAAAAGAGAATTGAGAATGATGGAGAGTTGGTGCAAAGGCAATGTAGGGATCTTGTGTTGATTACTAATGCTGAGACTGTGATGGATCATGAAGCTTCTTCCTCATCAATGAGAAAACCTATAAGTAAAGATCAGTTAGGATCAGCGTTGAAAAGCTTCGAGGAGGCTTTGAAGGAGTTAGTCCTAAGTAAGAATGAGGATGTTAATGTTGAAAATGTTGAGGCTACATTGACAAAAGCAAGAGTTACTATTAGAGCTAGATCAGAAGAAACCATTGTAAGTATCTTAAAGTGTATATTAACTTTCAACTTTGCAAGATTTTAAATAATAAATTGCTGTTCTTTTTCGCTAAAAGAAATTATTTTTATTGTGTTAGATCACTGATGGATGTCAATGGAGAAAGTATGGACAGAAACTGTCGAAAAGAAACCCATTTCCTAAAGCGTATTATCGTTGCAGCATGGCCCGTGGTTGCTCAGTCCGAAAACAGGTAACTTTCTTCTATAACTATCTAAAATATATGTATTTATTATGGTTTTAAATTTCTGTCACCTTAATGATTGCTTTCGCATTATTACATTCAACATTATATAGAATTACAATCAAATATGATTTATGCAACGTTTGCATTATAATCTTAATGACATTAAACTCTTTGATTGTTTCCTACATCGCAGTCACAGACATGCATATTTTAAGACCTTGGTCTTTAATCATTATCTTTATGTATGTTTTCAACTACTTACAAAATTACTTTGCATAGACAAATTTTTTTAGTAATTGATTAATTTGATATACATTGCACGAGGTTGAATAACAATAGAATTTAATTGAAATGTGTTTCCACTTTCAAAGCTCATGTTTCTATGCTAGAAAATGGATTTGGATTTGCTCCATTCTGCAATCCATGCATTTACGCAGCCAGTACGTTGATGGCCATTAAAAACTTAAATATGCATTGATGTTTGGATCATCCAATCTTCGATACAACGACCATCGACGTACTTACTATATGGATGCATGAATTTTATGACTGCAACAAACTCAAATCCAAAATGGTAGCTACCTAGCTAGGTTAGTTAAAATACTAATGAAGTGGTATGTATTATAATGACAATATTATTTACTATAGTTCAAACTTAACAGGTACAAAGGTGTGCTCTTGACAGAGCAGTTGTCATCACAACATATGAAGGAAATCACAACCACCCTTTACCTGCAGCAGCCAAAGAAATGGCAAAAACAACTTCTACAGCTGCAAAGATGCTTCTTTCAACATCAACAACAAGCAATGATGGACAATTGAATGCAAATTTACTCAGAAGAACACCCCTTCCTTGTTCTTCAAGTATTGCAACTATCTCAACTTCTGCCCCATTTCCAACCATTACACTTGATTATACTCAATCTCCAACTACTCCACAAAGGAACCCAGATCAGTTTCAAACTCCTTTAAACCGTCAGACTTCTGCAAATTCCTCAGCTTCTCTGATCTCTCAAACACCTAATCAGAACCAATCAAAATTTTGTGTCCCTTCAAAACTATTGGCAGTTCCAAATATTGCTCGGGCAGTCAACGCTGCCATTGCTGCTAATCCAAATTTTCCTGCAATTTTATCAGCTACTCTTACTTCCATGATTGGTGATACTCAGCCAAACAACACTACTGCTGCTACTGAAAATAATAATAATAATGGGAACAATGTCGCAAAAGGTAATAACAATGGAAATATCATAGGTAGCAACAACAAAGATGGGAAGGAATAA
Protein sequence

>MS.gene61600.t1

MDSNPVNINLELKLSPNENMDATHSTIPFLVNIRSSNENQTSPISSNETRIEFDFFKDNNNDHQEVVSASVPDKDHIHSDTSSLLELKLSLGPNPVTTNTSSDQSMMDDDMSPNSEDKRTKREMAILQGELKRKKTENCRLKLIYDQLKTDYNYMRMDFEKVMQDCKVKEVKGKEVFDGKIKEKKIAENGGVLVPRKIMDLGSATNKVMEVKGQEVYDGKFGEKKRMKNGGELVKRKFVDAGLATNKVKEVFNGKCEKKKRIENDGELVQRQCRDLVLITNAETVMDHEASSSSMRKPISKDQLGSALKSFEEALKELVLSKNEDVNVENVEATLTKARVTIRARSEETIITDGCQWRKYGQKLSKRNPFPKAYYRCSMARGCSVRKQVQRCALDRAVVITTYEGNHNHPLPAAAKEMAKTTSTAAKMLLSTSTTSNDGQLNANLLRRTPLPCSSSIATISTSAPFPTITLDYTQSPTTPQRNPDQFQTPLNRQTSANSSASLISQTPNQNQSKFCVPSKLLAVPNIARAVNAAIAANPNFPAILSATLTSMIGDTQPNNTTAATENNNNNGNNVAKGNNNGNIIGSNNKDGKE