Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62039.t1 | XP_003598354.1 | 94.3 | 316 | 18 | 0 | 1 | 316 | 1 | 316 | 2.70E-160 | 574.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62039.t1 | Q9LES3 | 50.2 | 307 | 124 | 8 | 14 | 316 | 10 | 291 | 4.0e-56 | 219.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62039.t1 | G7IVG7 | 94.3 | 316 | 18 | 0 | 1 | 316 | 1 | 316 | 1.9e-160 | 574.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene62039.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62039.t1 | MTR_3g010660 | 96.519 | 316 | 11 | 0 | 1 | 316 | 1 | 316 | 0.0 | 634 |
| MS.gene62039.t1 | MTR_8g043960 | 66.225 | 302 | 87 | 4 | 16 | 316 | 20 | 307 | 1.19e-135 | 387 |
| MS.gene62039.t1 | MTR_7g088090 | 49.524 | 315 | 125 | 9 | 20 | 316 | 16 | 314 | 4.51e-82 | 251 |
| MS.gene62039.t1 | MTR_6g026800 | 49.102 | 334 | 133 | 10 | 1 | 316 | 1 | 315 | 4.48e-77 | 239 |
| MS.gene62039.t1 | MTR_4g085910 | 35.882 | 340 | 155 | 11 | 20 | 301 | 18 | 352 | 1.42e-42 | 151 |
| MS.gene62039.t1 | MTR_5g088230 | 46.067 | 178 | 76 | 6 | 1 | 170 | 1 | 166 | 1.53e-34 | 127 |
| MS.gene62039.t1 | MTR_5g088230 | 57.317 | 82 | 35 | 0 | 235 | 316 | 182 | 263 | 9.79e-20 | 87.4 |
| MS.gene62039.t1 | MTR_5g088230 | 46.629 | 178 | 70 | 7 | 1 | 170 | 1 | 161 | 2.65e-33 | 124 |
| MS.gene62039.t1 | MTR_5g088230 | 57.317 | 82 | 35 | 0 | 235 | 316 | 177 | 258 | 1.06e-19 | 87.4 |
| MS.gene62039.t1 | MTR_2g086390 | 34.266 | 286 | 131 | 7 | 23 | 294 | 11 | 253 | 2.68e-33 | 124 |
| MS.gene62039.t1 | MTR_2g086390 | 34.256 | 289 | 127 | 9 | 23 | 294 | 11 | 253 | 2.74e-33 | 124 |
| MS.gene62039.t1 | MTR_2g086340 | 35.423 | 319 | 164 | 11 | 12 | 318 | 14 | 302 | 4.23e-28 | 111 |
| MS.gene62039.t1 | MTR_3g101780 | 48.361 | 122 | 56 | 2 | 19 | 138 | 26 | 142 | 9.67e-27 | 109 |
| MS.gene62039.t1 | MTR_3g101780 | 43.119 | 109 | 59 | 1 | 189 | 297 | 293 | 398 | 1.09e-17 | 83.6 |
| MS.gene62039.t1 | MTR_7g104480 | 43.182 | 132 | 56 | 3 | 26 | 138 | 45 | 176 | 2.13e-20 | 91.7 |
| MS.gene62039.t1 | MTR_5g060990 | 29.054 | 296 | 167 | 8 | 16 | 273 | 8 | 298 | 1.10e-19 | 88.2 |
| MS.gene62039.t1 | MTR_4g094390 | 42.718 | 103 | 53 | 2 | 196 | 296 | 77 | 175 | 1.45e-13 | 68.6 |
| MS.gene62039.t1 | MTR_7g015990 | 68.000 | 50 | 13 | 1 | 251 | 297 | 120 | 169 | 3.25e-12 | 64.7 |
| MS.gene62039.t1 | MTR_1g098590 | 62.745 | 51 | 19 | 0 | 246 | 296 | 157 | 207 | 3.97e-12 | 65.5 |
| MS.gene62039.t1 | MTR_1g098590 | 62.745 | 51 | 19 | 0 | 246 | 296 | 157 | 207 | 5.32e-12 | 64.7 |
| MS.gene62039.t1 | MTR_8g075130 | 50.769 | 65 | 29 | 1 | 243 | 304 | 97 | 161 | 6.47e-12 | 63.5 |
| MS.gene62039.t1 | MTR_1g098590 | 62.745 | 51 | 19 | 0 | 246 | 296 | 157 | 207 | 6.66e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62039.t1 | AT3G56850 | 52.443 | 307 | 117 | 8 | 14 | 316 | 10 | 291 | 1.73e-85 | 259 |
| MS.gene62039.t1 | AT2G41070 | 48.710 | 310 | 97 | 10 | 10 | 316 | 6 | 256 | 8.84e-73 | 226 |
| MS.gene62039.t1 | AT2G41070 | 48.710 | 310 | 97 | 10 | 10 | 316 | 6 | 256 | 8.84e-73 | 226 |
| MS.gene62039.t1 | AT2G41070 | 48.710 | 310 | 97 | 10 | 10 | 316 | 6 | 256 | 8.84e-73 | 226 |
| MS.gene62039.t1 | AT2G41070 | 48.710 | 310 | 97 | 10 | 10 | 316 | 15 | 265 | 8.94e-73 | 226 |
| MS.gene62039.t1 | AT2G41070 | 48.276 | 290 | 88 | 10 | 10 | 296 | 6 | 236 | 4.58e-64 | 203 |
| MS.gene62039.t1 | AT1G49720 | 34.320 | 338 | 162 | 7 | 18 | 296 | 21 | 357 | 4.39e-45 | 158 |
| MS.gene62039.t1 | AT1G49720 | 34.320 | 338 | 162 | 7 | 18 | 296 | 21 | 357 | 4.39e-45 | 158 |
| MS.gene62039.t1 | AT1G49720 | 34.320 | 338 | 162 | 7 | 18 | 296 | 21 | 357 | 6.74e-45 | 158 |
| MS.gene62039.t1 | AT2G36270 | 32.593 | 405 | 168 | 13 | 12 | 315 | 30 | 430 | 4.43e-37 | 138 |
| MS.gene62039.t1 | AT2G36270 | 32.593 | 405 | 168 | 13 | 12 | 315 | 30 | 430 | 4.43e-37 | 138 |
| MS.gene62039.t1 | AT2G36270 | 33.244 | 373 | 154 | 12 | 12 | 293 | 30 | 398 | 1.99e-35 | 133 |
| MS.gene62039.t1 | AT3G44460 | 37.705 | 305 | 131 | 13 | 14 | 294 | 22 | 291 | 2.42e-29 | 115 |
| MS.gene62039.t1 | AT3G19290 | 43.046 | 151 | 65 | 3 | 9 | 138 | 21 | 171 | 2.47e-25 | 105 |
| MS.gene62039.t1 | AT3G19290 | 43.046 | 151 | 65 | 3 | 9 | 138 | 21 | 171 | 2.98e-25 | 105 |
| MS.gene62039.t1 | AT3G19290 | 37.857 | 140 | 64 | 4 | 178 | 296 | 260 | 397 | 8.64e-14 | 72.0 |
| MS.gene62039.t1 | AT3G19290 | 43.046 | 151 | 65 | 3 | 9 | 138 | 21 | 171 | 3.47e-25 | 105 |
| MS.gene62039.t1 | AT3G19290 | 37.857 | 140 | 64 | 4 | 178 | 296 | 260 | 397 | 1.07e-13 | 71.6 |
| MS.gene62039.t1 | AT3G19290 | 43.046 | 151 | 65 | 3 | 9 | 138 | 21 | 171 | 3.47e-25 | 105 |
| MS.gene62039.t1 | AT3G19290 | 37.857 | 140 | 64 | 4 | 178 | 296 | 260 | 397 | 1.07e-13 | 71.6 |
| MS.gene62039.t1 | AT3G19290 | 43.046 | 151 | 65 | 3 | 9 | 138 | 21 | 171 | 3.58e-25 | 105 |
| MS.gene62039.t1 | AT3G19290 | 37.857 | 140 | 64 | 4 | 178 | 296 | 260 | 397 | 1.08e-13 | 71.6 |
| MS.gene62039.t1 | AT5G42910 | 28.363 | 342 | 166 | 10 | 15 | 295 | 15 | 338 | 1.90e-23 | 99.8 |
| MS.gene62039.t1 | AT4G34000 | 34.715 | 193 | 77 | 6 | 19 | 171 | 26 | 209 | 8.47e-22 | 95.9 |
| MS.gene62039.t1 | AT4G34000 | 60.000 | 60 | 24 | 0 | 237 | 296 | 359 | 418 | 2.51e-15 | 76.6 |
| MS.gene62039.t1 | AT4G34000 | 34.197 | 193 | 78 | 5 | 19 | 171 | 26 | 209 | 9.79e-22 | 95.5 |
| MS.gene62039.t1 | AT4G34000 | 60.000 | 65 | 25 | 1 | 237 | 301 | 359 | 422 | 3.38e-15 | 76.3 |
| MS.gene62039.t1 | AT4G34000 | 34.197 | 193 | 78 | 5 | 19 | 171 | 26 | 209 | 9.79e-22 | 95.5 |
| MS.gene62039.t1 | AT4G34000 | 60.000 | 65 | 25 | 1 | 237 | 301 | 359 | 422 | 3.38e-15 | 76.3 |
| MS.gene62039.t1 | AT4G34000 | 34.197 | 193 | 78 | 5 | 19 | 171 | 26 | 209 | 9.79e-22 | 95.5 |
| MS.gene62039.t1 | AT4G34000 | 60.000 | 65 | 25 | 1 | 237 | 301 | 359 | 422 | 3.38e-15 | 76.3 |
| MS.gene62039.t1 | AT1G45249 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 2.12e-21 | 94.0 |
| MS.gene62039.t1 | AT1G45249 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 2.12e-21 | 94.0 |
| MS.gene62039.t1 | AT1G45249 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 3.61e-21 | 93.6 |
| MS.gene62039.t1 | AT1G45249 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 3.61e-21 | 93.6 |
| MS.gene62039.t1 | AT1G45249 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 3.61e-21 | 93.6 |
| MS.gene62039.t1 | AT1G45249 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 3.61e-21 | 93.6 |
| MS.gene62039.t1 | AT1G45249 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 3.87e-21 | 93.6 |
| MS.gene62039.t1 | AT1G45249 | 41.007 | 139 | 57 | 5 | 195 | 316 | 280 | 410 | 2.60e-17 | 82.4 |
| MS.gene62039.t1 | AT1G45249 | 41.791 | 134 | 60 | 3 | 20 | 138 | 36 | 166 | 4.28e-21 | 93.6 |
| MS.gene62039.t1 | AT1G45249 | 41.007 | 139 | 57 | 5 | 195 | 316 | 295 | 425 | 3.72e-17 | 82.0 |
| MS.gene62039.t1 | AT1G45249 | 41.791 | 134 | 60 | 3 | 20 | 138 | 36 | 166 | 4.28e-21 | 93.6 |
| MS.gene62039.t1 | AT1G45249 | 41.007 | 139 | 57 | 5 | 195 | 316 | 295 | 425 | 3.72e-17 | 82.0 |
| MS.gene62039.t1 | AT1G45249 | 41.791 | 134 | 60 | 3 | 20 | 138 | 21 | 151 | 5.16e-21 | 93.2 |
| MS.gene62039.t1 | AT1G45249 | 38.000 | 150 | 57 | 6 | 195 | 316 | 280 | 421 | 1.91e-14 | 73.9 |
| MS.gene62039.t1 | AT4G35900 | 55.224 | 67 | 29 | 1 | 237 | 303 | 202 | 267 | 9.99e-15 | 73.6 |
| MS.gene62039.t1 | AT5G44080 | 33.654 | 208 | 83 | 9 | 96 | 297 | 120 | 278 | 2.73e-14 | 72.8 |
| MS.gene62039.t1 | AT1G03970 | 31.373 | 204 | 84 | 6 | 96 | 297 | 85 | 234 | 3.75e-14 | 72.0 |
| MS.gene62039.t1 | AT2G17770 | 55.738 | 61 | 26 | 1 | 237 | 297 | 112 | 171 | 5.02e-13 | 67.4 |
Find 74 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCGACGAAGCTGGCATTT+AGG | 0.252772 | 3.3:+5804595 | None:intergenic |
| AGAAGACGGTTGATGAAGTT+TGG | 0.321664 | 3.3:-5806293 | MS.gene62039:CDS |
| GATTCAACAACACTGACTTT+AGG | 0.341594 | 3.3:+5806120 | None:intergenic |
| TTTGGGTGAGATGACATTAG+AGG | 0.364587 | 3.3:-5806211 | MS.gene62039:CDS |
| TCAACCGTCTTCTTGCTTAA+CGG | 0.378968 | 3.3:+5806303 | None:intergenic |
| ACGAAGCTGGCATTTAGGTT+CGG | 0.387515 | 3.3:+5804600 | None:intergenic |
| TCAAGAGATGCAGTCTACTT+TGG | 0.394291 | 3.3:-5806229 | MS.gene62039:CDS |
| GCCACCTGACCATCTGTATA+CGG | 0.395127 | 3.3:+5805937 | None:intergenic |
| CGAAGCTGGCATTTAGGTTC+GGG | 0.399153 | 3.3:+5804601 | None:intergenic |
| GGTTAAAGCAGGCGTTGTTT+CGG | 0.403853 | 3.3:-5806181 | MS.gene62039:CDS |
| CAACCTAATCTGTCGTTAAC+CGG | 0.406252 | 3.3:-5806327 | MS.gene62039:CDS |
| CAAGAGATGCAGTCTACTTT+GGG | 0.419918 | 3.3:-5806228 | MS.gene62039:CDS |
| CAGAATCACTTAGGTGACTT+AGG | 0.427650 | 3.3:-5806474 | MS.gene62039:CDS |
| AGAAGAGGATGATTAAGAAT+CGG | 0.435534 | 3.3:-5805816 | MS.gene62039:CDS |
| TCAAGGTTCATACTACTTAG+TGG | 0.444599 | 3.3:+5806447 | None:intergenic |
| CCAGAGGCTGGAATTGCGGT+TGG | 0.448828 | 3.3:+5806538 | None:intergenic |
| GAAGAGGATGATTAAGAATC+GGG | 0.454965 | 3.3:-5805815 | MS.gene62039:CDS |
| CAGTCATTGCACATGGCAGC+CGG | 0.472274 | 3.3:-5805979 | MS.gene62039:CDS |
| CAAAGTCTCGCGTCTGGAAG+AGG | 0.475416 | 3.3:-5805630 | MS.gene62039:CDS |
| CGCGCCAGAGGCTGGAATTG+CGG | 0.479085 | 3.3:+5806534 | None:intergenic |
| GGACCGGTTAACGACAGATT+AGG | 0.482657 | 3.3:+5806324 | None:intergenic |
| GCGCTCAAGAGCAAGGAAAC+AGG | 0.483729 | 3.3:-5805782 | MS.gene62039:intron |
| GGAGATCAAAGTCTCGCGTC+TGG | 0.487266 | 3.3:-5805636 | MS.gene62039:CDS |
| CATGGCAGCCGGTGCTCCAT+CGG | 0.496616 | 3.3:-5805968 | MS.gene62039:CDS |
| CCAACCGCAATTCCAGCCTC+TGG | 0.504611 | 3.3:-5806538 | MS.gene62039:CDS |
| GATGAAGTTCAGAATCACTT+AGG | 0.504785 | 3.3:-5806483 | MS.gene62039:CDS |
| TCTGAACTTCATCAAGGGTA+AGG | 0.505070 | 3.3:+5806493 | None:intergenic |
| ATCTGCGAGAAAGCGGGGAC+CGG | 0.507079 | 3.3:-5805872 | MS.gene62039:CDS |
| CGTCTTCTTGCTTAACGGAC+CGG | 0.507684 | 3.3:+5806308 | None:intergenic |
| GTCCTCTCAACCATGTCCTC+CGG | 0.512408 | 3.3:+5805853 | None:intergenic |
| TGGCATTTAGGTTCGGGTGG+TGG | 0.513608 | 3.3:+5804607 | None:intergenic |
| TCAGATAAGTTTCCTACCAC+TGG | 0.525861 | 3.3:+5805904 | None:intergenic |
| AAAGCGGGGACCGGAGGACA+TGG | 0.527140 | 3.3:-5805863 | MS.gene62039:CDS |
| GACTGAGCTATGATCTGGCT+CGG | 0.527606 | 3.3:+5805997 | None:intergenic |
| CTGTTGAGAGGAAGCAGAAG+AGG | 0.527853 | 3.3:-5805831 | MS.gene62039:CDS |
| TACAGATGGTCAGGTGGCGT+TGG | 0.529554 | 3.3:-5805932 | MS.gene62039:CDS |
| ACAGAAATCTGCGAGAAAGC+GGG | 0.534375 | 3.3:-5805878 | MS.gene62039:CDS |
| AACGAGGACACAGCGCAAGC+CGG | 0.540740 | 3.3:-5806369 | MS.gene62039:CDS |
| AGTGATTCTGAACTTCATCA+AGG | 0.543380 | 3.3:+5806487 | None:intergenic |
| AACGCCGTCCGATGGAGCAC+CGG | 0.546844 | 3.3:+5805960 | None:intergenic |
| CTGCTGCGCGCTCAAGAGCA+AGG | 0.547968 | 3.3:-5805789 | MS.gene62039:CDS |
| GACCGGAGGACATGGTTGAG+AGG | 0.551705 | 3.3:-5805855 | MS.gene62039:CDS |
| CGCAATTCCAGCCTCTGGCG+CGG | 0.552340 | 3.3:-5806533 | MS.gene62039:CDS |
| CGTTCCGTATACAGATGGTC+AGG | 0.553919 | 3.3:-5805941 | MS.gene62039:CDS |
| TGCTGTGGATGCTGATAGTG+TGG | 0.563676 | 3.3:+5806042 | None:intergenic |
| TTAGGCATACACAACTGAGT+TGG | 0.564109 | 3.3:-5805657 | MS.gene62039:intron |
| TGCGAGAAAGCGGGGACCGG+AGG | 0.566566 | 3.3:-5805869 | MS.gene62039:CDS |
| GGCAAACCAATCAATTCGCA+TGG | 0.566719 | 3.3:-5806394 | MS.gene62039:CDS |
| CACAGAAATCTGCGAGAAAG+CGG | 0.574514 | 3.3:-5805879 | MS.gene62039:CDS |
| GTATACGGAACGCCGTCCGA+TGG | 0.577145 | 3.3:+5805952 | None:intergenic |
| CTGATGATACGCGACGAAGC+TGG | 0.577434 | 3.3:+5804587 | None:intergenic |
| TGAAAAGCTGAGGAAAGAGA+AGG | 0.578797 | 3.3:-5805603 | MS.gene62039:intron |
| GCAGCCGGTGCTCCATCGGA+CGG | 0.579352 | 3.3:-5805964 | MS.gene62039:CDS |
| GCATCCACAGCAAAGTGTGA+TGG | 0.583686 | 3.3:-5806031 | MS.gene62039:CDS |
| AGCTGGCATTTAGGTTCGGG+TGG | 0.592805 | 3.3:+5804604 | None:intergenic |
| GCAATGACTGAGCTATGATC+TGG | 0.599628 | 3.3:+5805992 | None:intergenic |
| TACTGTATCCACGGACCATG+TGG | 0.602459 | 3.3:+5806072 | None:intergenic |
| ACAACACTGACTTTAGGAGT+AGG | 0.608724 | 3.3:+5806126 | None:intergenic |
| ATCAATTCGCATGGAAAACG+AGG | 0.609101 | 3.3:-5806385 | MS.gene62039:CDS |
| GTGATTCTGAACTTCATCAA+GGG | 0.610620 | 3.3:+5806488 | None:intergenic |
| CATAGCTCAGTCATTGCACA+TGG | 0.615121 | 3.3:-5805986 | MS.gene62039:CDS |
| GCGTTGGCTTCACCAGTGGT+AGG | 0.620523 | 3.3:-5805916 | MS.gene62039:CDS |
| GTCGCCATCACACTTTGCTG+TGG | 0.628005 | 3.3:+5806027 | None:intergenic |
| AAGAGGAAAATGAAAAGCTG+AGG | 0.635284 | 3.3:-5805613 | MS.gene62039:CDS |
| GGTTGTGCATACTGTATCCA+CGG | 0.641304 | 3.3:+5806063 | None:intergenic |
| TGGTTGAGAGGACTGTTGAG+AGG | 0.642725 | 3.3:-5805843 | MS.gene62039:CDS |
| GGTGGCGTTGGCTTCACCAG+TGG | 0.643645 | 3.3:-5805920 | MS.gene62039:CDS |
| CAGAAATCTGCGAGAAAGCG+GGG | 0.644702 | 3.3:-5805877 | MS.gene62039:CDS |
| CCAACAAAACAACGATCATG+AGG | 0.650306 | 3.3:-5806262 | MS.gene62039:CDS |
| GACGGCGTTCCGTATACAGA+TGG | 0.652010 | 3.3:-5805946 | MS.gene62039:CDS |
| TCCGTATACAGATGGTCAGG+TGG | 0.656234 | 3.3:-5805938 | MS.gene62039:CDS |
| CGGTCCGTTAAGCAAGAAGA+CGG | 0.656636 | 3.3:-5806307 | MS.gene62039:CDS |
| ACAAAACAACGATCATGAGG+AGG | 0.694318 | 3.3:-5806259 | MS.gene62039:CDS |
| GGACCATGTGGAGAAAACTG+TGG | 0.769588 | 3.3:+5806084 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTATTACTTTTATTTTTTT+TGG | - | chr3.3:5806546-5806565 | MS.gene62039:CDS | 10.0% |
| !! | AATTTCAATATCTAAACATT+TGG | - | chr3.3:5805141-5805160 | MS.gene62039:intron | 15.0% |
| !! | ATTTACATTCTTAATTCTTA+TGG | - | chr3.3:5804611-5804630 | MS.gene62039:CDS | 15.0% |
| !! | GAAAAAAATTAAAGTTGTAT+TGG | - | chr3.3:5806215-5806234 | MS.gene62039:CDS | 15.0% |
| !!! | ATTAACAAAAAGATTTTCAA+TGG | + | chr3.3:5804516-5804535 | None:intergenic | 15.0% |
| !!! | TTATTTTCTCAAATTATTAC+CGG | - | chr3.3:5805037-5805056 | MS.gene62039:intron | 15.0% |
| !! | AAATTAGAACTTCAATAACA+TGG | + | chr3.3:5804333-5804352 | None:intergenic | 20.0% |
| !! | TACTTAATATCAAGAAACTA+AGG | + | chr3.3:5804552-5804571 | None:intergenic | 20.0% |
| !! | TATTCTGATATTTCATGTAT+TGG | - | chr3.3:5804840-5804859 | MS.gene62039:intron | 20.0% |
| !! | TGAAAAGTTTATACAATGAA+TGG | + | chr3.3:5805710-5805729 | None:intergenic | 20.0% |
| !! | TGAAATATCAGAATAATTCT+AGG | + | chr3.3:5804835-5804854 | None:intergenic | 20.0% |
| !! | TTGATTGTACTATATAAACA+AGG | + | chr3.3:5805184-5805203 | None:intergenic | 20.0% |
| !! | TTTGCTTAAAAGTTATAGTT+TGG | - | chr3.3:5804488-5804507 | MS.gene62039:intron | 20.0% |
| !!! | ACAAATTCAAATTTTTGGAA+TGG | - | chr3.3:5805330-5805349 | MS.gene62039:intron | 20.0% |
| !!! | ATGCTACAAATTCAAATTTT+TGG | - | chr3.3:5805325-5805344 | MS.gene62039:intron | 20.0% |
| !!! | GAAATTTGAAATCAGTAAAT+TGG | + | chr3.3:5805127-5805146 | None:intergenic | 20.0% |
| !!! | GTCTTTTTCTTATAAAGTAA+GGG | + | chr3.3:5806139-5806158 | None:intergenic | 20.0% |
| !!! | TACTTATTGACTGTTATTAT+TGG | - | chr3.3:5804900-5804919 | MS.gene62039:intron | 20.0% |
| !!! | TATTTTTTTTGGTGTGAATA+GGG | - | chr3.3:5806557-5806576 | MS.gene62039:CDS | 20.0% |
| !!! | TGTATAAACTTTTCAATCAT+GGG | - | chr3.3:5805715-5805734 | MS.gene62039:intron | 20.0% |
| !!! | TGTCTTTTTCTTATAAAGTA+AGG | + | chr3.3:5806140-5806159 | None:intergenic | 20.0% |
| !!! | TTATTTTTTTTGGTGTGAAT+AGG | - | chr3.3:5806556-5806575 | MS.gene62039:CDS | 20.0% |
| !!! | TTGTATAAACTTTTCAATCA+TGG | - | chr3.3:5805714-5805733 | MS.gene62039:intron | 20.0% |
| ! | AAATATGTACCTATATGTAG+AGG | - | chr3.3:5805508-5805527 | MS.gene62039:intron | 25.0% |
| ! | AATACATATGAAGGATTGAA+AGG | + | chr3.3:5804938-5804957 | None:intergenic | 25.0% |
| ! | AATGAGTAAAAAGATCATGA+AGG | - | chr3.3:5804874-5804893 | MS.gene62039:intron | 25.0% |
| ! | ATGGAAAAAGTTGTTTACTT+GGG | + | chr3.3:5804370-5804389 | None:intergenic | 25.0% |
| ! | CTAATTACAGTTATAATCCA+TGG | + | chr3.3:5804389-5804408 | None:intergenic | 25.0% |
| ! | GCAACAAGATTAATAAACAA+AGG | + | chr3.3:5805256-5805275 | None:intergenic | 25.0% |
| ! | GTTAAAGTGGATAATGTTTA+TGG | - | chr3.3:5805759-5805778 | MS.gene62039:intron | 25.0% |
| ! | TCTTAATTCTTATGGTGTTT+GGG | - | chr3.3:5804619-5804638 | MS.gene62039:CDS | 25.0% |
| ! | TTCTTAATTCTTATGGTGTT+TGG | - | chr3.3:5804618-5804637 | MS.gene62039:CDS | 25.0% |
| ! | TTTCAACAATCACATTTCAA+CGG | + | chr3.3:5805880-5805899 | None:intergenic | 25.0% |
| !! | ATCTCAATTTAGTTTCTGTA+CGG | - | chr3.3:5804574-5804593 | MS.gene62039:intron | 25.0% |
| !! | CATGGATTATAACTGTAATT+AGG | - | chr3.3:5804387-5804406 | MS.gene62039:intron | 25.0% |
| !! | TTACTGCTTAGAATTTTCTT+TGG | - | chr3.3:5804678-5804697 | MS.gene62039:intron | 25.0% |
| !!! | TAGGAAAACTTTTGAAAGAA+GGG | - | chr3.3:5805986-5806005 | MS.gene62039:CDS | 25.0% |
| AAATAAGCCATTGAATGTGA+AGG | + | chr3.3:5805612-5805631 | None:intergenic | 30.0% | |
| AGAAGAGGATGATTAAGAAT+CGG | - | chr3.3:5804246-5804265 | MS.gene62039:intron | 30.0% | |
| AGTGTCAGAAATACATATGA+AGG | + | chr3.3:5804947-5804966 | None:intergenic | 30.0% | |
| ATCTACAAACCTCTACATAT+AGG | + | chr3.3:5805520-5805539 | None:intergenic | 30.0% | |
| CATGGAAAAAGTTGTTTACT+TGG | + | chr3.3:5804371-5804390 | None:intergenic | 30.0% | |
| GAAAATTGTGAGAGAAAAGT+TGG | - | chr3.3:5806175-5806194 | MS.gene62039:CDS | 30.0% | |
| TAGATATTGAGTCGTTAAAG+TGG | - | chr3.3:5805746-5805765 | MS.gene62039:intron | 30.0% | |
| TGATATTGACACATAAACAC+CGG | + | chr3.3:5805059-5805078 | None:intergenic | 30.0% | |
| TTGGAATGGATGTATCTTTA+TGG | - | chr3.3:5805344-5805363 | MS.gene62039:intron | 30.0% | |
| TTTCTGACACTTCAAATTCA+AGG | - | chr3.3:5804956-5804975 | MS.gene62039:intron | 30.0% | |
| TTTGTAGATATGAGCATCTT+GGG | - | chr3.3:5805531-5805550 | MS.gene62039:intron | 30.0% | |
| ! | CTGATATTTCATGTATTGGT+TGG | - | chr3.3:5804844-5804863 | MS.gene62039:intron | 30.0% |
| ! | TTTTGCATTAAGCATTTGGA+TGG | - | chr3.3:5805297-5805316 | MS.gene62039:intron | 30.0% |
| !! | AAGTGACACTCATTTTGAAA+CGG | - | chr3.3:5806282-5806301 | MS.gene62039:CDS | 30.0% |
| !! | CAAGTAAACAACTTTTTCCA+TGG | - | chr3.3:5804369-5804388 | MS.gene62039:intron | 30.0% |
| !! | CTAGGAAAACTTTTGAAAGA+AGG | - | chr3.3:5805985-5806004 | MS.gene62039:CDS | 30.0% |
| !! | TTCCTTAATTTGTGTGCAAT+TGG | + | chr3.3:5806074-5806093 | None:intergenic | 30.0% |
| !!! | GATGACATTAGAGGATTTTT+TGG | - | chr3.3:5803860-5803879 | MS.gene62039:intron | 30.0% |
| !!! | TTGCATAGTGTTTTTTGAAG+AGG | - | chr3.3:5805272-5805291 | MS.gene62039:intron | 30.0% |
| AACTTGTAATTCCTCACTAG+TGG | + | chr3.3:5806383-5806402 | None:intergenic | 35.0% | |
| AAGAGGAAAATGAAAAGCTG+AGG | - | chr3.3:5804449-5804468 | MS.gene62039:intron | 35.0% | |
| AAGTAAGCACAAGACAGTAA+AGG | + | chr3.3:5804720-5804739 | None:intergenic | 35.0% | |
| ACGTTGAAAAACAACTTGTC+CGG | + | chr3.3:5803715-5803734 | None:intergenic | 35.0% | |
| AGCCAATTGCACACAAATTA+AGG | - | chr3.3:5806069-5806088 | MS.gene62039:CDS | 35.0% | |
| AGTAAGCACAAGACAGTAAA+GGG | + | chr3.3:5804719-5804738 | None:intergenic | 35.0% | |
| AGTGATTCTGAACTTCATCA+AGG | + | chr3.3:5803578-5803597 | None:intergenic | 35.0% | |
| AGTTGTTTACTTGGGAGAAA+CGG | + | chr3.3:5804362-5804381 | None:intergenic | 35.0% | |
| GAAATTGTGCACTTTGATGT+TGG | - | chr3.3:5804641-5804660 | MS.gene62039:intron | 35.0% | |
| GAAGAGGATGATTAAGAATC+GGG | - | chr3.3:5804247-5804266 | MS.gene62039:intron | 35.0% | |
| GATGAAGTTCAGAATCACTT+AGG | - | chr3.3:5803579-5803598 | MS.gene62039:intron | 35.0% | |
| GTAAAGGGTCACATATTCTA+TGG | + | chr3.3:5804704-5804723 | None:intergenic | 35.0% | |
| GTGATTCTGAACTTCATCAA+GGG | + | chr3.3:5803577-5803596 | None:intergenic | 35.0% | |
| GTTTAAGTATAGAACCTCAG+TGG | - | chr3.3:5805653-5805672 | MS.gene62039:CDS | 35.0% | |
| GTTTGTAGATATGAGCATCT+TGG | - | chr3.3:5805530-5805549 | MS.gene62039:intron | 35.0% | |
| TCAAGGTTCATACTACTTAG+TGG | + | chr3.3:5803618-5803637 | None:intergenic | 35.0% | |
| TGTCAATATCATGTCAGTGT+CGG | + | chr3.3:5804994-5805013 | None:intergenic | 35.0% | |
| TTTGATGCCTTCACATTCAA+TGG | - | chr3.3:5805602-5805621 | MS.gene62039:intron | 35.0% | |
| ! | AAGGCATCAAATAGCTAAGT+AGG | + | chr3.3:5805593-5805612 | None:intergenic | 35.0% |
| ! | ACGAGCTTCTGAAAAATGTA+TGG | - | chr3.3:5803637-5803656 | MS.gene62039:intron | 35.0% |
| ! | CTCAGTGGTAAAAGTTTTCT+GGG | - | chr3.3:5805668-5805687 | MS.gene62039:intron | 35.0% |
| ! | GAAAAATGTATGGACTGTTG+AGG | - | chr3.3:5803647-5803666 | MS.gene62039:intron | 35.0% |
| ! | GGCATTTTGCATTAAGCATT+TGG | - | chr3.3:5805293-5805312 | MS.gene62039:intron | 35.0% |
| ! | GTTTTACATACTCAACTTGC+AGG | - | chr3.3:5805406-5805425 | MS.gene62039:intron | 35.0% |
| ! | TAACGAAATATAACTTGCCG+AGG | + | chr3.3:5805814-5805833 | None:intergenic | 35.0% |
| ! | TCAGTGGTAAAAGTTTTCTG+GGG | - | chr3.3:5805669-5805688 | MS.gene62039:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr3.3:5806048-5806067 | None:intergenic | 35.0% |
| !! | ACTGTCTTGTGCTTACTTTT+AGG | - | chr3.3:5804722-5804741 | MS.gene62039:intron | 35.0% |
| !! | GATTCAACAACACTGACTTT+AGG | + | chr3.3:5803945-5803964 | None:intergenic | 35.0% |
| !!! | GAGGATTTTTTGGTTAAAGC+AGG | - | chr3.3:5803870-5803889 | MS.gene62039:intron | 35.0% |
| AAAGTTGGAGAGGGTAAAGT+TGG | - | chr3.3:5806190-5806209 | MS.gene62039:CDS | 40.0% | |
| AACCCTTTCTCCTTTCCAAT+AGG | + | chr3.3:5805965-5805984 | None:intergenic | 40.0% | |
| ACAAAACAACGATCATGAGG+AGG | - | chr3.3:5803803-5803822 | MS.gene62039:intron | 40.0% | |
| AGCCTATTGGAAAGGAGAAA+GGG | - | chr3.3:5805960-5805979 | MS.gene62039:CDS | 40.0% | |
| ATACCTAGTAACAACCTCCT+CGG | - | chr3.3:5805794-5805813 | MS.gene62039:CDS | 40.0% | |
| ATCAATTCGCATGGAAAACG+AGG | - | chr3.3:5803677-5803696 | MS.gene62039:intron | 40.0% | |
| CAACCTAATCTGTCGTTAAC+CGG | - | chr3.3:5803735-5803754 | MS.gene62039:intron | 40.0% | |
| CAAGAGATGCAGTCTACTTT+GGG | - | chr3.3:5803834-5803853 | MS.gene62039:intron | 40.0% | |
| CAGAATCACTTAGGTGACTT+AGG | - | chr3.3:5803588-5803607 | MS.gene62039:intron | 40.0% | |
| CCAACAAAACAACGATCATG+AGG | - | chr3.3:5803800-5803819 | MS.gene62039:intron | 40.0% | |
| CTTCAAATTCAAGGCGTGTT+TGG | - | chr3.3:5804965-5804984 | MS.gene62039:intron | 40.0% | |
| GATATGAGCATCTTGGGATA+TGG | - | chr3.3:5805537-5805556 | MS.gene62039:intron | 40.0% | |
| GTTGTTTACTTGGGAGAAAC+GGG | + | chr3.3:5804361-5804380 | None:intergenic | 40.0% | |
| TCAACCGTCTTCTTGCTTAA+CGG | + | chr3.3:5803762-5803781 | None:intergenic | 40.0% | |
| TCAAGAGATGCAGTCTACTT+TGG | - | chr3.3:5803833-5803852 | MS.gene62039:intron | 40.0% | |
| TCAGATAAGTTTCCTACCAC+TGG | + | chr3.3:5804161-5804180 | None:intergenic | 40.0% | |
| TCTGAACTTCATCAAGGGTA+AGG | + | chr3.3:5803572-5803591 | None:intergenic | 40.0% | |
| TGAAAAGCTGAGGAAAGAGA+AGG | - | chr3.3:5804459-5804478 | MS.gene62039:intron | 40.0% | |
| TGTCTCTGTCAACACTTCAT+AGG | - | chr3.3:5805085-5805104 | MS.gene62039:intron | 40.0% | |
| TGTGAGAGAAAAGTTGGAGA+GGG | - | chr3.3:5806181-5806200 | MS.gene62039:CDS | 40.0% | |
| TTAGGCATACACAACTGAGT+TGG | - | chr3.3:5804405-5804424 | MS.gene62039:intron | 40.0% | |
| TTGTGAGAGAAAAGTTGGAG+AGG | - | chr3.3:5806180-5806199 | MS.gene62039:CDS | 40.0% | |
| TTTGGGTGAGATGACATTAG+AGG | - | chr3.3:5803851-5803870 | MS.gene62039:intron | 40.0% | |
| ! | CCAGAAAACTTTTACCACTG+AGG | + | chr3.3:5805670-5805689 | None:intergenic | 40.0% |
| ! | CCTCAGTGGTAAAAGTTTTC+TGG | - | chr3.3:5805667-5805686 | MS.gene62039:intron | 40.0% |
| ! | CGTTTTCCATGCGAATTGAT+TGG | + | chr3.3:5803677-5803696 | None:intergenic | 40.0% |
| !! | ACAACACTGACTTTAGGAGT+AGG | + | chr3.3:5803939-5803958 | None:intergenic | 40.0% |
| !! | AGAAGACGGTTGATGAAGTT+TGG | - | chr3.3:5803769-5803788 | MS.gene62039:intron | 40.0% |
| !! | CATTTTTCAGAAGCTCGTCA+AGG | + | chr3.3:5803635-5803654 | None:intergenic | 40.0% |
| !! | CCTCATGATCGTTGTTTTGT+TGG | + | chr3.3:5803803-5803822 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr3.3:5806286-5806305 | MS.gene62039:CDS | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr3.3:5806305-5806286 | None:intergenic | 40.0% |
| !!! | TGACACTCATTTTGAAACGG+AGG | - | chr3.3:5806285-5806304 | MS.gene62039:CDS | 40.0% |
| ACAGAAATCTGCGAGAAAGC+GGG | - | chr3.3:5804184-5804203 | MS.gene62039:intron | 45.0% | |
| AGTAGAGAAGAGAGGACACA+AGG | + | chr3.3:5805938-5805957 | None:intergenic | 45.0% | |
| CACAGAAATCTGCGAGAAAG+CGG | - | chr3.3:5804183-5804202 | MS.gene62039:intron | 45.0% | |
| CAGCCTATTGGAAAGGAGAA+AGG | - | chr3.3:5805959-5805978 | MS.gene62039:CDS | 45.0% | |
| CATAGCTCAGTCATTGCACA+TGG | - | chr3.3:5804076-5804095 | MS.gene62039:intron | 45.0% | |
| CTTTCTCCTTTCCAATAGGC+TGG | + | chr3.3:5805961-5805980 | None:intergenic | 45.0% | |
| GAGAGGGTTGAATAGAGTCT+CGG | + | chr3.3:5805908-5805927 | None:intergenic | 45.0% | |
| GCAATGACTGAGCTATGATC+TGG | + | chr3.3:5804073-5804092 | None:intergenic | 45.0% | |
| GGCAAACCAATCAATTCGCA+TGG | - | chr3.3:5803668-5803687 | MS.gene62039:intron | 45.0% | |
| GGTTGTGCATACTGTATCCA+CGG | + | chr3.3:5804002-5804021 | None:intergenic | 45.0% | |
| TCTACTCCAGCCTATTGGAA+AGG | - | chr3.3:5805952-5805971 | MS.gene62039:CDS | 45.0% | |
| TCTTCTCTACTCCAGCCTAT+TGG | - | chr3.3:5805947-5805966 | MS.gene62039:CDS | 45.0% | |
| TGGAAAGGAGAAAGGGTTCT+AGG | - | chr3.3:5805967-5805986 | MS.gene62039:CDS | 45.0% | |
| ! | ACGAAGCTGGCATTTAGGTT+CGG | + | chr3.3:5805465-5805484 | None:intergenic | 45.0% |
| ! | CATTTCAACGGCTAACTTGC+CGG | + | chr3.3:5805868-5805887 | None:intergenic | 45.0% |
| ! | CGAAATATAACTTGCCGAGG+AGG | + | chr3.3:5805811-5805830 | None:intergenic | 45.0% |
| ! | GGTTAAAGCAGGCGTTGTTT+CGG | - | chr3.3:5803881-5803900 | MS.gene62039:intron | 45.0% |
| ! | TTGCCACAGTTTTCTCCACA+TGG | - | chr3.3:5803975-5803994 | MS.gene62039:intron | 45.0% |
| !! | TGAAGTGTTGACAGAGACAC+AGG | + | chr3.3:5805084-5805103 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr3.3:5806045-5806064 | None:intergenic | 45.0% |
| AAGAGAGGACACAAGGAAGG+AGG | + | chr3.3:5805931-5805950 | None:intergenic | 50.0% | |
| AGAGAGGACACAAGGAAGGA+GGG | + | chr3.3:5805930-5805949 | None:intergenic | 50.0% | |
| CAGAAATCTGCGAGAAAGCG+GGG | - | chr3.3:5804185-5804204 | MS.gene62039:intron | 50.0% | |
| CGATGTACATGCCACTAGTG+AGG | - | chr3.3:5806369-5806388 | MS.gene62039:CDS | 50.0% | |
| CGGTCCGTTAAGCAAGAAGA+CGG | - | chr3.3:5803755-5803774 | MS.gene62039:intron | 50.0% | |
| CGTTCCGTATACAGATGGTC+AGG | - | chr3.3:5804121-5804140 | MS.gene62039:intron | 50.0% | |
| CTGTTGAGAGGAAGCAGAAG+AGG | - | chr3.3:5804231-5804250 | MS.gene62039:intron | 50.0% | |
| GACTGAGCTATGATCTGGCT+CGG | + | chr3.3:5804068-5804087 | None:intergenic | 50.0% | |
| GAGAAGAGAGGACACAAGGA+AGG | + | chr3.3:5805934-5805953 | None:intergenic | 50.0% | |
| GAGCTATCCACCAACACATG+AGG | + | chr3.3:5806348-5806367 | None:intergenic | 50.0% | |
| GCATCCACAGCAAAGTGTGA+TGG | - | chr3.3:5804031-5804050 | MS.gene62039:intron | 50.0% | |
| GCCACCTGACCATCTGTATA+CGG | + | chr3.3:5804128-5804147 | None:intergenic | 50.0% | |
| GGACCATGTGGAGAAAACTG+TGG | + | chr3.3:5803981-5804000 | None:intergenic | 50.0% | |
| GGACCGGTTAACGACAGATT+AGG | + | chr3.3:5803741-5803760 | None:intergenic | 50.0% | |
| TACTGTATCCACGGACCATG+TGG | + | chr3.3:5803993-5804012 | None:intergenic | 50.0% | |
| TAGGCTGGAGTAGAGAAGAG+AGG | + | chr3.3:5805946-5805965 | None:intergenic | 50.0% | |
| TCCGTATACAGATGGTCAGG+TGG | - | chr3.3:5804124-5804143 | MS.gene62039:intron | 50.0% | |
| TGGTTGAGAGGACTGTTGAG+AGG | - | chr3.3:5804219-5804238 | MS.gene62039:intron | 50.0% | |
| TTGCCGAGGAGGTTGTTACT+AGG | + | chr3.3:5805800-5805819 | None:intergenic | 50.0% | |
| ! | AGTTTTCTCCACATGGTCCG+TGG | - | chr3.3:5803982-5804001 | MS.gene62039:intron | 50.0% |
| ! | ATTGAATTTTGCCGCGCCAG+AGG | + | chr3.3:5803543-5803562 | None:intergenic | 50.0% |
| ! | CGAAGCTGGCATTTAGGTTC+GGG | + | chr3.3:5805464-5805483 | None:intergenic | 50.0% |
| ! | CGTCTTCTTGCTTAACGGAC+CGG | + | chr3.3:5803757-5803776 | None:intergenic | 50.0% |
| ! | GCTAACTTGCCGGAATGGAA+GGG | + | chr3.3:5805858-5805877 | None:intergenic | 50.0% |
| ! | TGCTGTGGATGCTGATAGTG+TGG | + | chr3.3:5804023-5804042 | None:intergenic | 50.0% |
| ACGCGACGAAGCTGGCATTT+AGG | + | chr3.3:5805470-5805489 | None:intergenic | 55.0% | |
| CAAAGTCTCGCGTCTGGAAG+AGG | - | chr3.3:5804432-5804451 | MS.gene62039:intron | 55.0% | |
| CACATGAGGTCGACAGCACA+AGG | + | chr3.3:5806334-5806353 | None:intergenic | 55.0% | |
| CAGTCATTGCACATGGCAGC+CGG | - | chr3.3:5804083-5804102 | MS.gene62039:intron | 55.0% | |
| CTGATGATACGCGACGAAGC+TGG | + | chr3.3:5805478-5805497 | None:intergenic | 55.0% | |
| CTGTCGACCTCATGTGTTGG+TGG | - | chr3.3:5806338-5806357 | MS.gene62039:CDS | 55.0% | |
| GACACAAGGAAGGAGGGAGA+GGG | + | chr3.3:5805924-5805943 | None:intergenic | 55.0% | |
| GACGGCGTTCCGTATACAGA+TGG | - | chr3.3:5804116-5804135 | MS.gene62039:intron | 55.0% | |
| GCGCATAGTCCCTTCCATTC+CGG | - | chr3.3:5805846-5805865 | MS.gene62039:CDS | 55.0% | |
| GCGCTCAAGAGCAAGGAAAC+AGG | - | chr3.3:5804280-5804299 | MS.gene62039:intron | 55.0% | |
| GGAATGGAAGGGACTATGCG+CGG | + | chr3.3:5805847-5805866 | None:intergenic | 55.0% | |
| GGAGATCAAAGTCTCGCGTC+TGG | - | chr3.3:5804426-5804445 | MS.gene62039:intron | 55.0% | |
| GTCCTCTCAACCATGTCCTC+CGG | + | chr3.3:5804212-5804231 | None:intergenic | 55.0% | |
| GTCGCCATCACACTTTGCTG+TGG | + | chr3.3:5804038-5804057 | None:intergenic | 55.0% | |
| GTGCTGTCGACCTCATGTGT+TGG | - | chr3.3:5806335-5806354 | MS.gene62039:CDS | 55.0% | |
| TACAGATGGTCAGGTGGCGT+TGG | - | chr3.3:5804130-5804149 | MS.gene62039:intron | 55.0% | |
| ! | AGCTGGCATTTAGGTTCGGG+TGG | + | chr3.3:5805461-5805480 | None:intergenic | 55.0% |
| ! | CAACGGCTAACTTGCCGGAA+TGG | + | chr3.3:5805863-5805882 | None:intergenic | 55.0% |
| ! | GGCTAACTTGCCGGAATGGA+AGG | + | chr3.3:5805859-5805878 | None:intergenic | 55.0% |
| ! | TGGCATTTAGGTTCGGGTGG+TGG | + | chr3.3:5805458-5805477 | None:intergenic | 55.0% |
| AACGAGGACACAGCGCAAGC+CGG | - | chr3.3:5803693-5803712 | MS.gene62039:intron | 60.0% | |
| ATCTGCGAGAAAGCGGGGAC+CGG | - | chr3.3:5804190-5804209 | MS.gene62039:intron | 60.0% | |
| CCAACCGCAATTCCAGCCTC+TGG | - | chr3.3:5803524-5803543 | MS.gene62039:intron | 60.0% | |
| CCAGAGGCTGGAATTGCGGT+TGG | + | chr3.3:5803527-5803546 | None:intergenic | 60.0% | |
| GACCGGAGGACATGGTTGAG+AGG | - | chr3.3:5804207-5804226 | MS.gene62039:intron | 60.0% | |
| GGACACAAGGAAGGAGGGAG+AGG | + | chr3.3:5805925-5805944 | None:intergenic | 60.0% | |
| GTATACGGAACGCCGTCCGA+TGG | + | chr3.3:5804113-5804132 | None:intergenic | 60.0% | |
| ! | AATTTTGCCGCGCCAGAGGC+TGG | + | chr3.3:5803539-5803558 | None:intergenic | 60.0% |
| !! | GCGTTGGCTTCACCAGTGGT+AGG | - | chr3.3:5804146-5804165 | MS.gene62039:intron | 60.0% |
| AAAGCGGGGACCGGAGGACA+TGG | - | chr3.3:5804199-5804218 | MS.gene62039:intron | 65.0% | |
| AACGCCGTCCGATGGAGCAC+CGG | + | chr3.3:5804105-5804124 | None:intergenic | 65.0% | |
| CATGGCAGCCGGTGCTCCAT+CGG | - | chr3.3:5804094-5804113 | MS.gene62039:intron | 65.0% | |
| CGCAATTCCAGCCTCTGGCG+CGG | - | chr3.3:5803529-5803548 | MS.gene62039:intron | 65.0% | |
| CGCGCCAGAGGCTGGAATTG+CGG | + | chr3.3:5803531-5803550 | None:intergenic | 65.0% | |
| CTGCTGCGCGCTCAAGAGCA+AGG | - | chr3.3:5804273-5804292 | MS.gene62039:intron | 65.0% | |
| !! | GGTGGCGTTGGCTTCACCAG+TGG | - | chr3.3:5804142-5804161 | MS.gene62039:intron | 65.0% |
| GCAGCCGGTGCTCCATCGGA+CGG | - | chr3.3:5804098-5804117 | MS.gene62039:intron | 70.0% | |
| TGCGAGAAAGCGGGGACCGG+AGG | - | chr3.3:5804193-5804212 | MS.gene62039:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 5803486 | 5806598 | 5803486 | ID=MS.gene62039 |
| chr3.3 | mRNA | 5803486 | 5806598 | 5803486 | ID=MS.gene62039.t1;Parent=MS.gene62039 |
| chr3.3 | exon | 5805783 | 5806598 | 5805783 | ID=MS.gene62039.t1.exon1;Parent=MS.gene62039.t1 |
| chr3.3 | CDS | 5805783 | 5806598 | 5805783 | ID=cds.MS.gene62039.t1;Parent=MS.gene62039.t1 |
| chr3.3 | exon | 5805604 | 5805675 | 5805604 | ID=MS.gene62039.t1.exon2;Parent=MS.gene62039.t1 |
| chr3.3 | CDS | 5805604 | 5805675 | 5805604 | ID=cds.MS.gene62039.t1;Parent=MS.gene62039.t1 |
| chr3.3 | exon | 5804597 | 5804656 | 5804597 | ID=MS.gene62039.t1.exon3;Parent=MS.gene62039.t1 |
| chr3.3 | CDS | 5804597 | 5804656 | 5804597 | ID=cds.MS.gene62039.t1;Parent=MS.gene62039.t1 |
| chr3.3 | exon | 5803486 | 5803506 | 5803486 | ID=MS.gene62039.t1.exon4;Parent=MS.gene62039.t1 |
| chr3.3 | CDS | 5803486 | 5803506 | 5803486 | ID=cds.MS.gene62039.t1;Parent=MS.gene62039.t1 |
| Gene Sequence |
| Protein sequence |
