AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62098

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62098.t1 MTR_5g049190 95.299 234 11 0 1 234 9 242 1.80e-166 459
MS.gene62098.t1 MTR_3g077650 60.000 260 68 7 6 234 176 430 1.57e-101 302
MS.gene62098.t1 MTR_4g105660 55.242 248 84 4 6 228 175 420 3.88e-82 252
MS.gene62098.t1 MTR_7g037260 44.737 228 110 5 8 232 142 356 1.22e-55 181
MS.gene62098.t1 MTR_3g463400 48.780 205 85 3 9 196 131 332 5.80e-55 182
MS.gene62098.t1 MTR_5g070020 44.878 205 99 2 9 208 120 315 1.04e-54 179
MS.gene62098.t1 MTR_4g088015 60.140 143 54 1 8 147 218 360 1.83e-53 178
MS.gene62098.t1 MTR_7g451170 64.516 124 41 1 8 128 188 311 2.54e-50 169
MS.gene62098.t1 MTR_7g037130 42.731 227 114 5 8 231 142 355 4.71e-48 162
MS.gene62098.t1 MTR_1g057980 53.521 142 59 2 8 142 77 218 4.98e-43 147
MS.gene62098.t1 MTR_7g450950 53.237 139 60 1 7 140 153 291 5.76e-43 148
MS.gene62098.t1 MTR_7g035350 53.906 128 55 1 8 131 222 349 2.86e-42 149
MS.gene62098.t1 MTR_7g061330 61.165 103 40 0 9 111 111 213 5.22e-39 142
MS.gene62098.t1 MTR_7g461410 61.165 103 40 0 9 111 111 213 5.22e-39 142
MS.gene62098.t1 MTR_7g061330 61.165 103 40 0 9 111 75 177 8.45e-39 141
MS.gene62098.t1 MTR_1g026870 56.311 103 45 0 9 111 83 185 9.68e-38 140
MS.gene62098.t1 MTR_3g110028 53.922 102 47 0 9 110 83 184 5.14e-37 137
MS.gene62098.t1 MTR_4g019370 52.475 101 48 0 10 110 37 137 2.08e-33 123
MS.gene62098.t1 MTR_5g010650 56.701 97 42 0 8 104 107 203 2.30e-33 125
MS.gene62098.t1 MTR_4g094982 49.038 104 53 0 10 113 4 107 3.02e-33 121
MS.gene62098.t1 MTR_3g101290 47.170 106 56 0 5 110 31 136 4.21e-32 117
MS.gene62098.t1 MTR_5g016510 47.115 104 55 0 10 113 4 107 1.52e-31 117
MS.gene62098.t1 MTR_1g112760 34.518 197 119 4 6 200 10 198 3.53e-30 112
MS.gene62098.t1 MTR_0008s0390 47.664 107 53 2 6 110 10 115 2.13e-29 111
MS.gene62098.t1 MTR_2g089450 47.368 114 57 2 5 116 8 120 6.73e-29 109
MS.gene62098.t1 MTR_5g041570 49.057 106 54 0 7 112 130 235 6.97e-29 112
MS.gene62098.t1 MTR_1g043050 34.599 237 121 8 6 233 9 220 7.83e-29 109
MS.gene62098.t1 MTR_4g082040 49.515 103 52 0 10 112 104 206 8.24e-29 112
MS.gene62098.t1 MTR_3g052450 47.222 108 55 2 6 111 37 144 1.16e-28 113
MS.gene62098.t1 MTR_5g082910 46.939 98 52 0 10 107 18 115 1.29e-28 109
MS.gene62098.t1 MTR_0251s0050 46.903 113 55 3 6 114 10 121 1.30e-28 109
MS.gene62098.t1 MTR_5g079670 45.946 111 59 1 5 114 7 117 1.45e-28 107
MS.gene62098.t1 MTR_6g027340 33.173 208 117 5 1 194 1 200 1.59e-28 107
MS.gene62098.t1 MTR_0008s0470 46.226 106 54 2 7 110 11 115 2.46e-28 108
MS.gene62098.t1 MTR_6g015455 43.269 104 59 0 10 113 4 107 3.95e-28 112
MS.gene62098.t1 MTR_3g052430 49.074 108 51 3 7 111 39 145 4.26e-28 111
MS.gene62098.t1 MTR_4g478180 51.485 101 46 2 6 104 10 109 4.58e-28 109
MS.gene62098.t1 MTR_2g089420 46.226 106 54 2 11 114 13 117 5.54e-28 110
MS.gene62098.t1 MTR_5g078140 49.107 112 54 2 5 114 8 118 6.06e-28 108
MS.gene62098.t1 MTR_7g096930 34.524 168 101 2 6 164 9 176 6.66e-28 107
MS.gene62098.t1 MTR_6g009430 43.636 110 61 1 6 114 9 118 7.12e-28 108
MS.gene62098.t1 MTR_6g074860 47.664 107 53 1 11 114 4 110 7.57e-28 106
MS.gene62098.t1 MTR_7g115650 47.619 105 54 1 11 114 14 118 7.69e-28 105
MS.gene62098.t1 MTR_2g089620 49.057 106 53 1 6 110 9 114 8.17e-28 108
MS.gene62098.t1 MTR_3g089045 52.336 107 48 1 11 114 16 122 9.09e-28 107
MS.gene62098.t1 MTR_8g017440 39.850 133 73 3 5 131 8 139 9.67e-28 108
MS.gene62098.t1 MTR_3g065440 45.669 127 65 3 5 128 8 133 1.96e-27 107
MS.gene62098.t1 MTR_3g461490 34.783 184 90 4 6 188 9 163 2.06e-27 107
MS.gene62098.t1 MTR_3g077110 43.750 112 60 2 6 115 9 119 2.07e-27 107
MS.gene62098.t1 MTR_4g073420 39.306 173 94 5 6 168 9 180 2.13e-27 106
MS.gene62098.t1 MTR_5g029840 45.794 107 57 1 9 114 12 118 3.15e-27 107
MS.gene62098.t1 MTR_4g029540 47.321 112 55 3 9 118 10 119 3.72e-27 105
MS.gene62098.t1 MTR_6g027360 45.192 104 57 0 7 110 74 177 4.42e-27 105
MS.gene62098.t1 MTR_6g006030 42.017 119 66 2 9 125 14 131 6.88e-27 103
MS.gene62098.t1 MTR_2g099740 44.954 109 57 2 5 111 8 115 8.93e-27 106
MS.gene62098.t1 MTR_8g042410 38.509 161 89 6 11 162 39 198 1.03e-26 107
MS.gene62098.t1 MTR_5g007370 47.573 103 51 2 4 104 7 108 1.06e-26 104
MS.gene62098.t1 MTR_1g045610 51.042 96 44 2 11 104 23 117 1.07e-26 103
MS.gene62098.t1 MTR_5g010020 45.545 101 54 1 5 104 8 108 1.32e-26 105
MS.gene62098.t1 MTR_1g110460 39.344 122 73 1 9 129 26 147 1.41e-26 104
MS.gene62098.t1 MTR_3g028740 47.664 107 55 1 5 110 18 124 1.44e-26 105
MS.gene62098.t1 MTR_6g027370 46.667 105 53 1 10 111 98 202 1.45e-26 105
MS.gene62098.t1 MTR_1g043080 47.573 103 51 2 6 106 9 110 1.47e-26 103
MS.gene62098.t1 MTR_4g065017 46.364 110 57 2 3 110 10 119 1.49e-26 105
MS.gene62098.t1 MTR_4g102380 46.429 112 57 2 5 114 8 118 1.51e-26 103
MS.gene62098.t1 MTR_7g076740 41.912 136 59 4 5 137 8 126 1.59e-26 104
MS.gene62098.t1 MTR_2g097910 47.525 101 52 1 11 110 22 122 1.63e-26 104
MS.gene62098.t1 MTR_2g011660 48.515 101 51 1 11 110 15 115 1.70e-26 105
MS.gene62098.t1 MTR_4g105130 33.673 196 121 5 6 198 9 198 1.71e-26 105
MS.gene62098.t1 MTR_3g074520 50.000 102 48 2 5 104 8 108 1.79e-26 105
MS.gene62098.t1 MTR_8g031360 48.544 103 51 1 4 104 8 110 1.91e-26 103
MS.gene62098.t1 MTR_7g035075 45.918 98 52 1 8 104 13 110 2.27e-26 101
MS.gene62098.t1 MTR_8g095390 43.966 116 63 2 6 119 9 124 3.03e-26 103
MS.gene62098.t1 MTR_8g017540 40.909 132 74 3 5 133 54 184 3.32e-26 105
MS.gene62098.t1 MTR_3g011610 47.573 103 50 3 11 110 39 140 3.49e-26 106
MS.gene62098.t1 MTR_3g097450 48.649 111 53 3 11 118 14 123 4.16e-26 103
MS.gene62098.t1 MTR_1g073170 50.000 96 45 2 11 104 22 116 4.50e-26 102
MS.gene62098.t1 MTR_7g110830 35.329 167 103 3 6 170 9 172 4.51e-26 104
MS.gene62098.t1 MTR_1g076150 47.573 103 51 2 6 106 9 110 4.60e-26 102
MS.gene62098.t1 MTR_1g085040 47.525 101 50 2 6 104 9 108 5.39e-26 103
MS.gene62098.t1 MTR_8g017500 43.443 122 65 3 5 123 8 128 5.77e-26 103
MS.gene62098.t1 MTR_8g006470 43.636 110 60 2 3 110 4 113 6.77e-26 102
MS.gene62098.t1 MTR_1g062940 49.000 100 48 2 7 104 4 102 8.15e-26 100
MS.gene62098.t1 MTR_4g485530 40.984 122 71 1 11 131 14 135 9.80e-26 99.8
MS.gene62098.t1 MTR_7g111290 48.515 101 49 2 6 104 9 108 1.06e-25 103
MS.gene62098.t1 MTR_5g079290 31.771 192 123 3 1 188 13 200 1.25e-25 101
MS.gene62098.t1 MTR_4g091490 49.020 102 49 2 11 110 15 115 1.58e-25 102
MS.gene62098.t1 MTR_4g100720 47.000 100 52 1 6 104 10 109 1.66e-25 98.6
MS.gene62098.t1 MTR_4g063100 44.444 108 57 2 11 116 9 115 2.68e-25 100
MS.gene62098.t1 MTR_1g085640 46.000 100 53 1 6 104 9 108 2.94e-25 102
MS.gene62098.t1 MTR_7g086960 40.000 150 83 2 11 154 89 237 3.02e-25 102
MS.gene62098.t1 MTR_2g064160 42.623 122 66 3 6 124 8 128 3.10e-25 101
MS.gene62098.t1 MTR_0001s0360 32.515 163 109 1 9 170 7 169 3.83e-25 99.8
MS.gene62098.t1 MTR_6g055910 42.975 121 68 1 6 125 11 131 4.36e-25 100
MS.gene62098.t1 MTR_5g062790 44.737 114 57 3 1 110 1 112 5.70e-25 100
MS.gene62098.t1 MTR_7g011170 40.136 147 79 4 6 143 9 155 5.74e-25 100
MS.gene62098.t1 MTR_8g098860 43.564 101 56 1 5 104 8 108 6.09e-25 100
MS.gene62098.t1 MTR_8g027345 47.000 100 52 1 6 104 9 108 6.29e-25 100
MS.gene62098.t1 MTR_0063s0090 43.269 104 56 2 5 106 8 110 6.55e-25 98.2
MS.gene62098.t1 MTR_5g078910 44.118 102 56 1 11 111 9 110 8.58e-25 99.8
MS.gene62098.t1 MTR_1g100653 43.220 118 61 4 6 118 9 125 8.94e-25 99.8
MS.gene62098.t1 MTR_4g125520 34.911 169 88 4 6 170 9 159 9.13e-25 99.8
MS.gene62098.t1 MTR_8g017390 40.625 128 73 2 5 129 8 135 1.14e-24 101
MS.gene62098.t1 MTR_2g034790 46.226 106 56 1 6 110 9 114 1.54e-24 99.8
MS.gene62098.t1 MTR_4g121460 44.340 106 58 1 6 110 9 114 1.59e-24 99.8
MS.gene62098.t1 MTR_7g017260 45.794 107 55 1 1 104 17 123 1.65e-24 98.6
MS.gene62098.t1 MTR_5g079220 42.593 108 61 1 9 115 21 128 1.77e-24 98.6
MS.gene62098.t1 MTR_1g021230 47.917 96 47 2 11 104 59 153 2.29e-24 100
MS.gene62098.t1 MTR_8g020490 47.619 105 53 2 1 104 1 104 3.26e-24 97.4
MS.gene62098.t1 MTR_5g042030 49.474 95 47 1 11 104 9 103 4.65e-24 97.4
MS.gene62098.t1 MTR_1g100667 43.810 105 58 1 11 114 15 119 5.29e-24 97.1
MS.gene62098.t1 MTR_5g078950 41.121 107 62 1 4 109 2 108 5.97e-24 96.7
MS.gene62098.t1 MTR_2g067420 46.535 101 53 1 5 104 10 110 7.59e-24 97.8
MS.gene62098.t1 MTR_8g017340 44.444 108 58 1 6 111 9 116 8.13e-24 99.4
MS.gene62098.t1 MTR_4g082290 47.000 100 52 1 6 104 9 108 1.20e-23 98.2
MS.gene62098.t1 MTR_1g086510 41.346 104 60 1 2 104 14 117 1.40e-23 95.9
MS.gene62098.t1 MTR_4g082230 47.525 101 50 2 6 104 9 108 1.42e-23 97.8
MS.gene62098.t1 MTR_8g060940 43.269 104 58 1 5 107 3 106 1.62e-23 95.1
MS.gene62098.t1 MTR_0008s0280 41.748 103 59 1 5 106 8 110 2.03e-23 94.7
MS.gene62098.t1 MTR_5g088640 46.078 102 53 2 11 110 14 115 2.11e-23 95.5
MS.gene62098.t1 MTR_5g088080 46.602 103 51 3 11 110 14 115 2.12e-23 95.5
MS.gene62098.t1 MTR_5g088150 46.602 103 51 3 11 110 14 115 2.12e-23 95.5
MS.gene62098.t1 MTR_5g488210 46.602 103 51 3 11 110 14 115 2.12e-23 95.5
MS.gene62098.t1 MTR_1g086530 44.898 98 51 2 9 104 33 129 2.15e-23 95.5
MS.gene62098.t1 MTR_2g096380 40.909 110 62 2 9 116 6 114 2.53e-23 94.4
MS.gene62098.t1 MTR_0197s0010 50.538 93 43 2 14 104 6 97 2.78e-23 94.4
MS.gene62098.t1 MTR_5g088610 41.964 112 63 2 1 110 1 112 2.81e-23 96.7
MS.gene62098.t1 MTR_8g017350 44.444 108 56 3 6 110 9 115 2.88e-23 98.2
MS.gene62098.t1 MTR_1g083630 37.143 140 83 3 1 136 1 139 3.33e-23 97.8
MS.gene62098.t1 MTR_5g078800 41.509 106 61 1 11 115 9 114 3.46e-23 94.7
MS.gene62098.t1 MTR_5g078860 42.453 106 60 1 11 115 9 114 4.15e-23 95.5
MS.gene62098.t1 MTR_5g488170 46.602 103 51 3 11 110 14 115 4.31e-23 94.0
MS.gene62098.t1 MTR_7g010210 30.612 196 115 5 5 180 8 202 4.43e-23 95.5
MS.gene62098.t1 MTR_7g010210 30.612 196 115 5 5 180 8 202 4.59e-23 94.7
MS.gene62098.t1 MTR_1g017140 45.545 101 53 2 6 104 9 109 5.35e-23 95.5
MS.gene62098.t1 MTR_7g117730 42.574 101 57 1 5 104 8 108 5.36e-23 94.0
MS.gene62098.t1 MTR_5g014990 46.535 101 52 2 6 104 9 109 6.08e-23 95.1
MS.gene62098.t1 MTR_2g095520 44.554 101 54 2 6 104 9 109 9.47e-23 94.7
MS.gene62098.t1 MTR_4g097570 43.137 102 55 2 6 104 9 110 1.26e-22 94.0
MS.gene62098.t1 MTR_0247s0040 42.574 101 57 1 5 104 3 103 1.47e-22 90.9
MS.gene62098.t1 MTR_2g088170 48.598 107 52 2 6 110 26 131 2.69e-22 94.7
MS.gene62098.t1 MTR_5g079120 41.667 108 62 1 5 111 57 164 2.76e-22 93.2
MS.gene62098.t1 MTR_0140s0030 40.909 110 64 1 6 114 10 119 4.02e-22 93.2
MS.gene62098.t1 MTR_0489s0020 40.909 110 64 1 6 114 10 119 4.02e-22 93.2
MS.gene62098.t1 MTR_3g103570 43.137 102 56 2 5 104 8 109 6.88e-22 92.8
MS.gene62098.t1 MTR_3g083540 41.584 101 56 2 6 104 38 137 8.07e-22 91.7
MS.gene62098.t1 MTR_6g090405 36.667 120 74 2 6 123 9 128 8.50e-22 90.9
MS.gene62098.t1 MTR_6g012690 40.541 111 65 1 5 114 8 118 1.17e-21 92.0
MS.gene62098.t1 MTR_4g097570 42.574 101 56 2 6 104 9 109 1.29e-21 90.9
MS.gene62098.t1 MTR_4g057635 36.752 117 72 2 5 119 8 124 1.75e-21 91.3
MS.gene62098.t1 MTR_5g078930 37.226 137 84 2 11 145 11 147 1.95e-21 89.0
MS.gene62098.t1 MTR_6g012180 40.594 101 59 1 5 104 8 108 2.28e-21 90.9
MS.gene62098.t1 MTR_4g128670 44.554 101 54 2 6 104 9 109 2.38e-21 91.3
MS.gene62098.t1 MTR_1g017000 34.146 164 99 6 5 166 8 164 2.52e-21 89.4
MS.gene62098.t1 MTR_3g039990 39.091 110 66 1 6 114 10 119 3.29e-21 90.1
MS.gene62098.t1 MTR_2g033170 41.509 106 60 2 11 115 26 130 3.55e-21 90.5
MS.gene62098.t1 MTR_7g087130 38.843 121 70 2 6 122 9 129 5.17e-21 90.1
MS.gene62098.t1 MTR_0193s0090 39.252 107 64 1 5 110 3 109 6.48e-21 87.4
MS.gene62098.t1 MTR_7g102110 41.176 102 58 2 5 104 8 109 1.72e-20 87.8
MS.gene62098.t1 MTR_6g055910 47.561 82 43 0 44 125 21 102 6.38e-20 85.9
MS.gene62098.t1 MTR_1g008970 34.667 150 73 4 34 181 113 239 6.74e-20 85.9
MS.gene62098.t1 MTR_4g123040 39.286 112 57 2 4 104 9 120 1.30e-19 85.9
MS.gene62098.t1 MTR_7g035300 41.818 110 52 3 7 116 72 169 1.67e-19 84.3
MS.gene62098.t1 MTR_7g111290 57.377 61 26 0 44 104 6 66 3.44e-19 85.1
MS.gene62098.t1 MTR_4g063100 45.205 73 40 0 44 116 14 86 4.29e-19 82.8
MS.gene62098.t1 MTR_4g128190 43.689 103 45 3 9 110 11 101 5.01e-19 83.2
MS.gene62098.t1 MTR_7g109320 45.536 112 59 2 6 115 9 120 8.21e-19 84.3
MS.gene62098.t1 MTR_5g038910 40.594 101 58 1 14 112 29 129 2.11e-18 83.6
MS.gene62098.t1 MTR_5g038910 40.594 101 58 1 14 112 29 129 3.16e-18 82.8
MS.gene62098.t1 MTR_7g061550 41.176 102 57 2 13 111 9 110 1.10e-17 81.3
MS.gene62098.t1 MTR_5g007300 42.683 82 46 1 4 84 59 140 4.43e-17 75.5
MS.gene62098.t1 MTR_8g468380 38.462 91 56 0 14 104 25 115 7.68e-17 79.3
MS.gene62098.t1 MTR_2g096380 41.096 73 43 0 44 116 23 95 3.06e-16 75.1
MS.gene62098.t1 MTR_3g045430 33.945 109 71 1 7 114 11 119 7.87e-16 75.1
MS.gene62098.t1 MTR_1g085880 36.585 123 74 3 14 132 17 139 5.66e-15 71.2
MS.gene62098.t1 MTR_1g085770 41.000 100 57 2 14 111 17 116 1.97e-14 71.6
MS.gene62098.t1 MTR_6g080360 38.542 96 58 1 9 104 528 622 2.79e-13 69.3
MS.gene62098.t1 MTR_6g080360 33.333 102 67 1 3 104 471 571 2.03e-11 63.5
MS.gene62098.t1 MTR_6g080360 33.884 121 70 2 9 129 308 418 5.34e-13 68.2
MS.gene62098.t1 MTR_6g080360 33.333 102 67 1 3 104 251 351 4.93e-11 62.4
MS.gene62098.t1 MTR_0023s0210 38.272 81 49 1 5 84 3 83 7.54e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62098.t1 AT4G18770 54.930 213 77 5 6 208 212 415 2.99e-70 221
MS.gene62098.t1 AT5G58850 49.519 208 72 6 8 197 102 294 3.72e-54 179
MS.gene62098.t1 AT3G27785 59.559 136 48 1 6 134 184 319 7.09e-53 176
MS.gene62098.t1 AT5G11050 70.909 110 32 0 8 117 102 211 9.90e-51 171
MS.gene62098.t1 AT5G40360 54.198 131 55 1 9 134 156 286 1.26e-44 153
MS.gene62098.t1 AT3G09370 60.748 107 40 1 8 112 127 233 4.91e-41 146
MS.gene62098.t1 AT3G09370 60.748 107 40 1 8 112 132 238 5.47e-41 146
MS.gene62098.t1 AT3G09370 60.748 107 40 1 8 112 140 246 8.44e-41 146
MS.gene62098.t1 AT2G25230 51.515 132 61 1 6 134 21 152 3.99e-40 138
MS.gene62098.t1 AT5G11510 38.860 193 96 4 9 191 79 259 1.15e-39 145
MS.gene62098.t1 AT5G11510 38.860 193 96 4 9 191 79 259 1.15e-39 145
MS.gene62098.t1 AT5G11510 38.860 193 96 4 9 191 79 259 1.15e-39 145
MS.gene62098.t1 AT5G11510 38.860 193 96 4 9 191 79 259 1.22e-39 145
MS.gene62098.t1 AT5G11510 38.860 193 96 4 9 191 79 259 1.32e-39 145
MS.gene62098.t1 AT5G02320 60.606 99 39 0 9 107 125 223 4.88e-38 139
MS.gene62098.t1 AT5G02320 60.606 99 39 0 9 107 125 223 4.88e-38 139
MS.gene62098.t1 AT5G02320 60.606 99 39 0 9 107 65 163 6.26e-38 138
MS.gene62098.t1 AT4G32730 44.379 169 80 4 9 166 85 250 6.92e-38 140
MS.gene62098.t1 AT4G32730 44.379 169 80 4 9 166 85 250 6.92e-38 140
MS.gene62098.t1 AT4G32730 44.379 169 80 4 9 166 85 250 6.92e-38 140
MS.gene62098.t1 AT4G32730 44.379 169 80 4 9 166 85 250 6.92e-38 140
MS.gene62098.t1 AT4G32730 44.379 169 80 4 9 166 85 250 9.94e-38 139
MS.gene62098.t1 AT5G40430 46.269 134 64 3 6 134 49 179 2.39e-34 124
MS.gene62098.t1 AT3G55730 51.923 104 50 0 10 113 55 158 2.06e-32 122
MS.gene62098.t1 AT5G67300 46.847 111 56 1 10 117 5 115 4.16e-31 116
MS.gene62098.t1 AT3G09230 49.515 103 52 0 10 112 54 156 5.81e-31 117
MS.gene62098.t1 AT4G37260 47.321 112 58 1 2 113 5 115 7.28e-31 116
MS.gene62098.t1 AT4G00540 51.304 115 51 2 8 119 100 212 1.48e-30 117
MS.gene62098.t1 AT4G00540 39.048 105 55 3 10 105 45 149 5.42e-15 73.6
MS.gene62098.t1 AT3G50060 47.115 104 55 0 10 113 5 108 1.67e-30 115
MS.gene62098.t1 AT1G69560 47.273 110 58 0 3 112 99 208 2.36e-30 115
MS.gene62098.t1 AT1G69560 47.273 110 58 0 3 112 115 224 2.37e-30 115
MS.gene62098.t1 AT4G00540 51.304 115 51 2 8 119 98 210 3.30e-30 116
MS.gene62098.t1 AT4G00540 39.048 105 55 3 10 105 43 147 8.84e-15 73.2
MS.gene62098.t1 AT2G39880 43.478 138 72 3 10 141 49 186 3.80e-30 115
MS.gene62098.t1 AT2G23290 47.115 104 55 0 10 113 12 115 7.16e-30 113
MS.gene62098.t1 AT1G17950 48.673 113 54 2 11 120 5 116 3.29e-29 110
MS.gene62098.t1 AT4G33450 49.550 111 53 1 4 111 12 122 3.55e-29 110
MS.gene62098.t1 AT1G26780 50.980 102 50 0 11 112 98 199 4.89e-29 110
MS.gene62098.t1 AT4G22680 36.905 168 86 4 5 170 8 157 5.46e-29 110
MS.gene62098.t1 AT1G26780 50.980 102 50 0 11 112 98 199 1.01e-28 111
MS.gene62098.t1 AT3G29020 47.525 101 53 0 11 111 65 165 2.35e-28 107
MS.gene62098.t1 AT5G59780 43.860 114 61 2 11 122 10 122 2.43e-28 107
MS.gene62098.t1 AT3G11440 44.643 112 60 2 2 111 34 145 2.54e-28 111
MS.gene62098.t1 AT1G22640 43.307 127 70 2 6 130 9 135 2.79e-28 108
MS.gene62098.t1 AT3G46130 44.737 114 60 2 11 122 11 123 4.39e-28 107
MS.gene62098.t1 AT3G11440 44.643 112 60 2 2 111 34 145 5.42e-28 111
MS.gene62098.t1 AT3G11440 44.643 112 60 2 2 111 34 145 5.42e-28 111
MS.gene62098.t1 AT3G11440 44.643 112 60 2 2 111 34 145 5.42e-28 111
MS.gene62098.t1 AT3G12720 30.769 247 128 8 6 219 19 255 5.44e-28 108
MS.gene62098.t1 AT3G29020 47.525 101 53 0 11 111 67 167 7.10e-28 108
MS.gene62098.t1 AT4G12350 43.939 132 70 3 9 137 12 142 1.21e-27 107
MS.gene62098.t1 AT2G31180 44.538 119 63 2 6 122 9 126 1.23e-27 106
MS.gene62098.t1 AT4G28110 46.729 107 56 1 5 110 8 114 1.31e-27 107
MS.gene62098.t1 AT5G26660 39.726 146 82 4 6 146 9 153 1.35e-27 108
MS.gene62098.t1 AT4G26930 43.119 109 60 2 11 118 21 128 1.43e-27 108
MS.gene62098.t1 AT3G28470 47.000 100 52 1 6 104 9 108 1.89e-27 107
MS.gene62098.t1 AT5G16600 48.214 112 55 2 5 114 8 118 1.93e-27 107
MS.gene62098.t1 AT1G63910 41.270 126 67 2 5 123 8 133 2.04e-27 108
MS.gene62098.t1 AT3G27810 47.000 100 52 1 6 104 17 116 2.43e-27 104
MS.gene62098.t1 AT2G26960 37.931 174 93 5 6 166 17 188 2.56e-27 108
MS.gene62098.t1 AT1G66230 48.214 112 55 2 5 114 8 118 2.57e-27 106
MS.gene62098.t1 AT1G73410 50.467 107 50 1 11 114 6 112 2.73e-27 105
MS.gene62098.t1 AT3G01530 39.041 146 81 3 9 152 25 164 3.86e-27 103
MS.gene62098.t1 AT1G57560 37.662 154 82 3 6 157 9 150 4.43e-27 105
MS.gene62098.t1 AT1G57560 44.643 112 59 2 6 115 9 119 4.82e-27 105
MS.gene62098.t1 AT4G38620 45.161 124 64 3 6 126 9 131 4.86e-27 105
MS.gene62098.t1 AT1G09540 38.217 157 93 3 6 159 9 164 6.40e-27 106
MS.gene62098.t1 AT4G13480 44.697 132 64 4 11 140 8 132 6.41e-27 104
MS.gene62098.t1 AT3G60460 47.664 107 54 2 6 110 8 114 6.63e-27 105
MS.gene62098.t1 AT1G73410 50.467 107 50 1 11 114 6 112 7.47e-27 102
MS.gene62098.t1 AT2G47190 38.931 131 79 1 2 131 13 143 9.63e-27 104
MS.gene62098.t1 AT3G13890 42.593 108 61 1 5 111 8 115 9.89e-27 105
MS.gene62098.t1 AT5G56110 41.912 136 73 2 6 135 9 144 1.08e-26 105
MS.gene62098.t1 AT1G74430 43.396 106 59 1 11 115 14 119 1.19e-26 103
MS.gene62098.t1 AT3G24310 46.957 115 53 4 11 122 20 129 1.22e-26 103
MS.gene62098.t1 AT5G14750 47.368 95 49 1 11 104 18 112 1.73e-26 102
MS.gene62098.t1 AT5G07690 51.579 95 45 1 11 104 14 108 1.83e-26 105
MS.gene62098.t1 AT4G25560 47.619 105 54 1 11 114 12 116 1.85e-26 103
MS.gene62098.t1 AT5G40350 46.667 105 54 2 9 112 17 120 1.97e-26 102
MS.gene62098.t1 AT5G10280 50.000 100 47 2 7 104 10 108 2.14e-26 104
MS.gene62098.t1 AT4G21440 45.794 107 57 1 6 111 9 115 2.25e-26 105
MS.gene62098.t1 AT1G35515 44.144 111 61 1 6 115 9 119 2.30e-26 102
MS.gene62098.t1 AT2G26950 45.794 107 55 2 6 110 13 118 3.05e-26 105
MS.gene62098.t1 AT5G14340 36.646 161 83 3 5 163 20 163 3.07e-26 103
MS.gene62098.t1 AT5G40330 44.340 106 57 2 1 104 3 108 3.38e-26 101
MS.gene62098.t1 AT2G32460 48.039 102 50 2 11 110 8 108 5.99e-26 105
MS.gene62098.t1 AT2G32460 48.039 102 50 2 11 110 20 120 6.01e-26 105
MS.gene62098.t1 AT1G06180 46.903 113 55 3 6 114 9 120 6.03e-26 101
MS.gene62098.t1 AT5G65230 49.020 102 49 2 5 104 8 108 6.15e-26 103
MS.gene62098.t1 AT5G06100 40.625 128 68 3 11 130 34 161 6.30e-26 105
MS.gene62098.t1 AT5G17800 43.966 116 62 1 11 123 93 208 6.50e-26 103
MS.gene62098.t1 AT3G02940 45.370 108 58 1 5 111 8 115 6.83e-26 102
MS.gene62098.t1 AT3G02940 45.370 108 58 1 5 111 8 115 8.58e-26 102
MS.gene62098.t1 AT3G02940 45.370 108 58 1 5 111 8 115 8.58e-26 102
MS.gene62098.t1 AT3G08500 47.222 108 56 1 4 110 25 132 9.22e-26 103
MS.gene62098.t1 AT5G61420 50.526 95 46 1 11 104 14 108 9.24e-26 103
MS.gene62098.t1 AT4G05100 46.226 106 56 1 6 110 10 115 9.57e-26 102
MS.gene62098.t1 AT4G09460 46.296 108 55 2 6 111 9 115 1.02e-25 100
MS.gene62098.t1 AT5G06100 40.625 128 68 3 11 130 34 161 1.10e-25 104
MS.gene62098.t1 AT5G06100 40.625 128 68 3 11 130 34 161 1.10e-25 104
MS.gene62098.t1 AT5G06100 40.625 128 68 3 11 130 34 161 1.10e-25 104
MS.gene62098.t1 AT5G06100 40.625 128 68 3 11 130 34 161 1.10e-25 104
MS.gene62098.t1 AT1G79180 45.631 103 55 1 5 106 10 112 1.20e-25 102
MS.gene62098.t1 AT3G13890 40.171 117 60 2 5 111 8 124 1.35e-25 103
MS.gene62098.t1 AT3G27920 46.316 95 50 1 11 104 16 110 1.43e-25 100
MS.gene62098.t1 AT4G01680 36.913 149 91 3 6 152 9 156 1.80e-25 100
MS.gene62098.t1 AT5G16770 47.059 102 53 1 11 111 14 115 1.94e-25 102
MS.gene62098.t1 AT5G16770 47.059 102 53 1 11 111 14 115 1.94e-25 102
MS.gene62098.t1 AT3G48920 44.444 108 59 1 11 117 20 127 2.17e-25 100
MS.gene62098.t1 AT1G25340 41.463 123 69 2 11 131 20 141 2.35e-25 100
MS.gene62098.t1 AT5G12870 45.714 105 56 1 11 114 20 124 2.60e-25 100
MS.gene62098.t1 AT1G16490 42.727 110 62 1 5 113 10 119 2.78e-25 100
MS.gene62098.t1 AT5G16770 47.059 102 53 1 11 111 14 115 2.98e-25 101
MS.gene62098.t1 AT5G16770 47.059 102 53 1 11 111 14 115 2.98e-25 101
MS.gene62098.t1 AT5G07700 49.474 95 47 1 11 104 14 108 3.10e-25 101
MS.gene62098.t1 AT5G07700 49.474 95 47 1 11 104 14 108 3.10e-25 101
MS.gene62098.t1 AT5G55020 47.917 96 47 2 11 104 28 122 3.42e-25 103
MS.gene62098.t1 AT3G61250 40.000 135 62 3 5 137 8 125 3.94e-25 100
MS.gene62098.t1 AT1G56160 47.059 102 51 2 5 104 10 110 3.95e-25 100
MS.gene62098.t1 AT3G30210 47.222 108 50 3 11 116 29 131 4.11e-25 100
MS.gene62098.t1 AT4G01680 36.913 149 91 3 6 152 9 156 5.35e-25 100
MS.gene62098.t1 AT1G25340 39.669 121 69 1 11 131 20 136 6.67e-25 99.8
MS.gene62098.t1 AT1G68320 35.811 148 89 3 11 156 21 164 8.36e-25 99.8
MS.gene62098.t1 AT1G25340 39.669 121 69 1 11 131 20 136 1.07e-24 99.8
MS.gene62098.t1 AT2G16720 43.966 116 63 2 6 119 9 124 1.87e-24 98.2
MS.gene62098.t1 AT3G23250 32.759 174 91 4 6 178 9 157 2.80e-24 98.2
MS.gene62098.t1 AT3G53200 40.310 129 66 3 9 127 9 136 3.12e-24 97.1
MS.gene62098.t1 AT5G35550 44.762 105 57 1 11 114 16 120 3.58e-24 97.4
MS.gene62098.t1 AT4G34990 45.794 107 57 1 6 111 9 115 4.66e-24 97.4
MS.gene62098.t1 AT3G13540 28.095 210 130 5 6 208 20 215 4.96e-24 96.7
MS.gene62098.t1 AT5G52600 46.000 100 53 1 6 104 9 108 6.97e-24 95.1
MS.gene62098.t1 AT5G54230 47.423 97 50 1 9 104 12 108 7.11e-24 97.8
MS.gene62098.t1 AT1G48000 35.915 142 86 2 9 149 32 169 8.87e-24 95.9
MS.gene62098.t1 AT4G17785 45.714 105 54 2 9 111 13 116 1.10e-23 97.8
MS.gene62098.t1 AT2G47460 37.589 141 86 2 6 144 9 149 1.10e-23 97.8
MS.gene62098.t1 AT4G17785 45.714 105 54 2 9 111 13 116 1.29e-23 97.4
MS.gene62098.t1 AT4G01680 35.404 161 89 4 6 152 9 168 1.43e-23 97.4
MS.gene62098.t1 AT3G01140 45.000 100 54 1 6 104 9 108 1.46e-23 97.4
MS.gene62098.t1 AT1G18570 43.396 106 59 1 11 115 15 120 1.82e-23 97.1
MS.gene62098.t1 AT3G01140 44.554 101 55 1 5 104 51 151 2.11e-23 97.4
MS.gene62098.t1 AT1G74080 48.421 95 48 1 11 104 14 108 2.15e-23 96.7
MS.gene62098.t1 AT5G15310 44.554 101 55 1 5 104 8 108 3.36e-23 95.9
MS.gene62098.t1 AT5G15310 44.554 101 55 1 5 104 8 108 3.46e-23 95.9
MS.gene62098.t1 AT3G62610 45.283 106 57 1 6 110 9 114 3.49e-23 96.3
MS.gene62098.t1 AT5G57620 45.545 101 53 2 6 104 9 109 4.13e-23 95.9
MS.gene62098.t1 AT5G15310 45.000 100 54 1 6 104 9 108 4.79e-23 94.0
MS.gene62098.t1 AT5G62320 44.545 110 51 3 11 111 15 123 5.44e-23 94.0
MS.gene62098.t1 AT1G34670 48.485 99 42 2 11 104 14 108 5.52e-23 95.9
MS.gene62098.t1 AT5G60890 48.454 97 49 1 9 104 12 108 6.66e-23 94.7
MS.gene62098.t1 AT5G39700 44.444 99 55 0 12 110 57 155 1.10e-22 91.7
MS.gene62098.t1 AT5G62470 42.424 99 57 0 6 104 9 107 1.26e-22 94.7
MS.gene62098.t1 AT3G49690 46.535 101 52 2 6 104 9 109 1.97e-22 93.6
MS.gene62098.t1 AT5G49330 41.379 116 67 1 6 120 9 124 4.92e-22 93.2
MS.gene62098.t1 AT1G74650 38.793 116 70 1 6 120 9 124 4.95e-22 92.8
MS.gene62098.t1 AT5G52260 47.170 106 53 2 11 114 14 118 5.36e-22 91.7
MS.gene62098.t1 AT5G65790 45.545 101 53 2 6 104 9 109 6.05e-22 93.2
MS.gene62098.t1 AT5G26660 37.500 128 66 3 22 146 6 122 1.06e-21 91.7
MS.gene62098.t1 AT3G47600 37.500 120 74 1 5 123 8 127 1.15e-21 92.0
MS.gene62098.t1 AT5G23000 41.667 108 61 2 6 111 9 116 1.98e-21 91.3
MS.gene62098.t1 AT3G12820 41.593 113 63 2 5 115 10 121 2.33e-21 89.4
MS.gene62098.t1 AT3G28910 38.739 111 67 1 5 114 8 118 2.79e-21 90.9
MS.gene62098.t1 AT1G66370 40.909 110 56 2 11 115 10 115 3.97e-21 89.0
MS.gene62098.t1 AT5G49620 37.600 125 77 1 8 131 25 149 4.30e-21 90.1
MS.gene62098.t1 AT1G18710 36.792 106 66 1 11 115 14 119 4.74e-21 89.0
MS.gene62098.t1 AT5G62470 42.000 100 57 1 6 104 9 108 4.75e-21 90.5
MS.gene62098.t1 AT1G79180 33.333 144 62 2 5 114 10 153 4.82e-21 90.1
MS.gene62098.t1 AT3G18100 41.379 116 59 1 11 126 546 652 8.08e-21 91.3
MS.gene62098.t1 AT3G18100 39.806 103 60 2 3 104 487 588 2.61e-15 75.1
MS.gene62098.t1 AT4G37780 40.594 101 58 2 6 104 9 109 1.15e-20 88.6
MS.gene62098.t1 AT3G18100 41.379 116 59 1 11 126 498 604 1.19e-20 90.9
MS.gene62098.t1 AT3G18100 39.806 103 60 2 3 104 439 540 4.10e-15 74.7
MS.gene62098.t1 AT3G18100 41.379 116 59 1 11 126 385 491 1.39e-20 90.5
MS.gene62098.t1 AT3G18100 39.806 103 60 2 3 104 326 427 5.96e-15 73.9
MS.gene62098.t1 AT3G18100 41.379 116 59 1 11 126 333 439 1.45e-20 90.5
MS.gene62098.t1 AT3G18100 39.806 103 60 2 3 104 274 375 6.10e-15 73.9
MS.gene62098.t1 AT1G08810 39.091 110 66 1 6 114 9 118 3.04e-20 87.0
MS.gene62098.t1 AT3G53200 44.565 92 43 1 44 127 12 103 1.15e-19 84.0
MS.gene62098.t1 AT3G06490 42.857 98 53 2 9 104 19 115 1.65e-19 85.9
MS.gene62098.t1 AT3G27810 55.738 61 27 0 44 104 7 67 1.86e-19 82.8
MS.gene62098.t1 AT5G35550 52.113 71 34 0 44 114 53 123 2.84e-19 84.3
MS.gene62098.t1 AT5G59780 43.038 79 45 0 44 122 23 101 4.62e-19 82.8
MS.gene62098.t1 AT1G66380 46.316 95 50 1 11 104 10 104 7.51e-19 80.1
MS.gene62098.t1 AT3G46130 43.038 79 45 0 44 122 13 91 7.89e-19 82.4
MS.gene62098.t1 AT3G46130 43.038 79 45 0 44 122 23 101 1.06e-18 82.0
MS.gene62098.t1 AT5G40350 52.174 69 32 1 44 112 8 75 1.67e-18 80.1
MS.gene62098.t1 AT5G14750 50.000 66 31 1 41 104 13 78 1.81e-18 80.1
MS.gene62098.t1 AT2G36890 40.594 101 58 2 6 104 9 109 2.37e-18 82.4
MS.gene62098.t1 AT1G56650 44.444 108 49 3 11 111 10 113 2.59e-18 81.3
MS.gene62098.t1 AT2G36890 40.196 102 59 2 5 104 49 150 3.16e-18 82.4
MS.gene62098.t1 AT1G66390 44.444 108 49 3 11 111 10 113 6.34e-18 80.5
MS.gene62098.t1 AT5G49620 33.813 139 77 2 8 131 25 163 9.44e-18 80.9
MS.gene62098.t1 AT1G14350 39.560 91 55 0 14 104 28 118 2.31e-17 80.9
MS.gene62098.t1 AT1G14350 39.560 91 55 0 14 104 28 118 2.31e-17 80.9
MS.gene62098.t1 AT3G12820 48.611 72 37 0 44 115 2 73 3.37e-17 77.0
MS.gene62098.t1 AT2G02820 39.560 91 55 0 14 104 33 123 4.67e-17 79.3
MS.gene62098.t1 AT2G02820 39.560 91 55 0 14 104 33 123 7.52e-17 79.3
MS.gene62098.t1 AT2G02820 39.560 91 55 0 14 104 33 123 8.50e-17 79.3
MS.gene62098.t1 AT2G37630 38.318 107 63 2 13 116 6 112 4.95e-16 76.6
MS.gene62098.t1 AT1G22640 46.154 78 41 1 54 130 1 78 1.22e-15 73.2
MS.gene62098.t1 AT3G47600 42.500 80 46 0 44 123 42 121 2.24e-15 74.3
MS.gene62098.t1 AT1G71030 42.647 68 39 0 47 114 5 72 8.68e-14 67.8
MS.gene62098.t1 AT1G71030 42.647 68 39 0 47 114 19 86 1.04e-13 67.8
MS.gene62098.t1 AT5G14750 47.059 51 27 0 54 104 1 51 1.83e-12 63.2
MS.gene62098.t1 AT5G14750 47.059 51 27 0 54 104 1 51 1.83e-12 63.2
MS.gene62098.t1 AT3G23250 32.000 125 60 3 54 178 1 100 2.56e-12 64.7
MS.gene62098.t1 AT1G66380 50.820 61 30 0 44 104 11 71 3.31e-12 61.6

Find 40 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGTTGGACTTATTGTTTC+TGG 0.208598 5.1:+37987946 None:intergenic
AAACAGGTTGTTGATAAATT+TGG 0.222494 5.1:-37987795 MS.gene62098:intron
AACAATATGGATTGAGAAAA+TGG 0.259457 5.1:-37987769 MS.gene62098:CDS
ATAAATTTGGTTGAACAATA+TGG 0.264742 5.1:-37987782 MS.gene62098:CDS
TCATCTAAGGCCAGATATTA+AGG 0.302440 5.1:-37987684 MS.gene62098:intron
AATAAGTCCAACATTGTAAA+AGG 0.302515 5.1:-37987938 MS.gene62098:CDS
TAAATATGCACCTTAATATC+TGG 0.361547 5.1:+37987674 None:intergenic
AGTTCTCCCAGGTAACCTTT+TGG 0.388296 5.1:+37986688 None:intergenic
TATCATCGAAACAAATATCT+AGG 0.397614 5.1:+37986399 None:intergenic
AGCGATGGATTAATCATCTA+AGG 0.404504 5.1:-37987697 MS.gene62098:CDS
CAGAAATTGCCTGGTAGAAT+GGG 0.415190 5.1:-37987734 MS.gene62098:CDS
TTCTCTTTGTTGCATACCAA+TGG 0.423307 5.1:+37986648 None:intergenic
TCAGAAATTGCCTGGTAGAA+TGG 0.424216 5.1:-37987735 MS.gene62098:CDS
GATACTGTGCTTTGGTTGGT+TGG 0.451841 5.1:+37986488 None:intergenic
ATGAAAGCTCATGGAGAGTT+GGG 0.459209 5.1:-37986731 MS.gene62098:CDS
GATGATAATTTGTTTCAAGA+TGG 0.462758 5.1:-37986383 MS.gene62098:CDS
ACTGAGCTGATACTGTGCTT+TGG 0.465214 5.1:+37986480 None:intergenic
GCTTATTGCAGAAGGACATA+TGG 0.469322 5.1:-37986778 MS.gene62098:intron
ATGATAATTTGTTTCAAGAT+GGG 0.473555 5.1:-37986382 MS.gene62098:CDS
ATGGAGAGTTGGGAAACAAA+TGG 0.474382 5.1:-37986721 MS.gene62098:CDS
ATTGTTGAAGATACTATGCT+TGG 0.483599 5.1:-37986326 MS.gene62098:CDS
TGGCAAACACTCGCTGTCAC+TGG 0.483623 5.1:+37986508 None:intergenic
TGGAGAGTTGGGAAACAAAT+GGG 0.485266 5.1:-37986720 MS.gene62098:CDS
GATGAAAGCTCATGGAGAGT+TGG 0.489934 5.1:-37986732 MS.gene62098:CDS
AATGGACACTAGAAGAAGAT+AGG 0.491531 5.1:-37987913 MS.gene62098:intron
AGCTGATACTGTGCTTTGGT+TGG 0.502136 5.1:+37986484 None:intergenic
AAGATTGCCAAAAGGTTACC+TGG 0.505167 5.1:-37986695 MS.gene62098:CDS
GATATTGCTCAGAAATTGCC+TGG 0.518276 5.1:-37987743 MS.gene62098:CDS
AAAATATTGATGAAAGCTCA+TGG 0.523945 5.1:-37986740 MS.gene62098:CDS
AGTTGATGTTAAGAAAGAGC+TGG 0.524954 5.1:-37986303 MS.gene62098:CDS
TAGCAAACACTCACTGTCAC+TGG 0.528697 5.1:+37986448 None:intergenic
AAAACTCAATTAAGAACCAT+TGG 0.528712 5.1:-37986664 MS.gene62098:CDS
TGTAGAAGAGTACTTCCACT+AGG 0.556277 5.1:+37986602 None:intergenic
AATGGGTAAAGATTGCCAAA+AGG 0.578915 5.1:-37986703 MS.gene62098:CDS
GTAGAAGAGTACTTCCACTA+GGG 0.594021 5.1:+37986603 None:intergenic
CCAACATTGTAAAAGGACAA+TGG 0.619413 5.1:-37987931 MS.gene62098:CDS
AGATTGCCAAAAGGTTACCT+GGG 0.630842 5.1:-37986694 MS.gene62098:CDS
GAAAACAGTGTAGAGAGCGA+TGG 0.636133 5.1:-37987712 MS.gene62098:CDS
GCAGAAGGACATATGGAGTG+AGG 0.656245 5.1:-37986771 MS.gene62098:intron
AGTGAGTGTTTGCTATCAAG+TGG 0.700440 5.1:-37986440 MS.gene62098:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATATAACTTTTTTTTATAA+AGG + chr5.1:37986660-37986679 None:intergenic 10.0%
!!! TTTTATATTTTTTACCAATT+TGG - chr5.1:37986367-37986386 MS.gene62098:CDS 10.0%
!! AAATACTAAAAAAAGAATCA+GGG + chr5.1:37986581-37986600 None:intergenic 15.0%
!! AAATTCAATAAAAAAGAATC+AGG + chr5.1:37986631-37986650 None:intergenic 15.0%
!! ACTTACTATTAAAAGTTATT+AGG + chr5.1:37986891-37986910 None:intergenic 15.0%
!! ATTGAAAAATAAATTTGTGT+TGG - chr5.1:37986985-37987004 MS.gene62098:intron 15.0%
!!! TATATTGATGATTTGATAAA+AGG - chr5.1:37987153-37987172 MS.gene62098:intron 15.0%
!! AAAAATACCATCCTTAAAAT+TGG - chr5.1:37986757-37986776 MS.gene62098:CDS 20.0%
!! AATACTAAAAAAAGAATCAG+GGG + chr5.1:37986580-37986599 None:intergenic 20.0%
!! ATAAATTTGGTTGAACAATA+TGG - chr5.1:37986439-37986458 MS.gene62098:CDS 20.0%
!! CCTATAAAAATCTAGATTAA+AGG + chr5.1:37986815-37986834 None:intergenic 20.0%
!! GAAATACTAAAAAAAGAATC+AGG + chr5.1:37986582-37986601 None:intergenic 20.0%
!! GTATTACAAAGAAAAATGTT+TGG - chr5.1:37987078-37987097 MS.gene62098:intron 20.0%
!!! ATGATAATTTGTTTCAAGAT+GGG - chr5.1:37987839-37987858 MS.gene62098:intron 20.0%
!!! ATTTTCTTGTATACTCTTTT+GGG + chr5.1:37987681-37987700 None:intergenic 20.0%
!!! CCTTTAATCTAGATTTTTAT+AGG - chr5.1:37986812-37986831 MS.gene62098:intron 20.0%
!!! TAAATTTTCTAAAATGCTAG+CGG + chr5.1:37987380-37987399 None:intergenic 20.0%
! AAAACTCAATTAAGAACCAT+TGG - chr5.1:37987557-37987576 MS.gene62098:intron 25.0%
! AAAATATTGATGAAAGCTCA+TGG - chr5.1:37987481-37987500 MS.gene62098:intron 25.0%
! AATAAGTCCAACATTGTAAA+AGG - chr5.1:37986283-37986302 MS.gene62098:CDS 25.0%
! AATGAATGTAGTGATATTTG+GGG - chr5.1:37987205-37987224 MS.gene62098:intron 25.0%
! CTAACTCAACAATAGTATTT+GGG + chr5.1:37987234-37987253 None:intergenic 25.0%
! GAAAAATAAATTTGTGTTGG+TGG - chr5.1:37986988-37987007 MS.gene62098:intron 25.0%
! GAATGAATGTAGTGATATTT+GGG - chr5.1:37987204-37987223 MS.gene62098:intron 25.0%
! TAAATATGCACCTTAATATC+TGG + chr5.1:37986550-37986569 None:intergenic 25.0%
! TATCATCGAAACAAATATCT+AGG + chr5.1:37987825-37987844 None:intergenic 25.0%
! TCTAACTCAACAATAGTATT+TGG + chr5.1:37987235-37987254 None:intergenic 25.0%
! TGAATGAATGTAGTGATATT+TGG - chr5.1:37987203-37987222 MS.gene62098:intron 25.0%
!! AAACAGGTTGTTGATAAATT+TGG - chr5.1:37986426-37986445 MS.gene62098:CDS 25.0%
!! AACAATATGGATTGAGAAAA+TGG - chr5.1:37986452-37986471 MS.gene62098:CDS 25.0%
!! GATTTTCTTGTATACTCTTT+TGG + chr5.1:37987682-37987701 None:intergenic 25.0%
!! TTTTCTTGTATACTCTTTTG+GGG + chr5.1:37987680-37987699 None:intergenic 25.0%
!!! AAATTTTCTAAAATGCTAGC+GGG + chr5.1:37987379-37987398 None:intergenic 25.0%
!!! GATGATAATTTGTTTCAAGA+TGG - chr5.1:37987838-37987857 MS.gene62098:intron 25.0%
AATACCATCCTTAAAATTGG+TGG - chr5.1:37986760-37986779 MS.gene62098:CDS 30.0%
AATGTTGGACTTATTGTTTC+TGG + chr5.1:37986278-37986297 None:intergenic 30.0%
AGAATTTCAAGATTGAACCT+AGG + chr5.1:37986715-37986734 None:intergenic 30.0%
ATGTCTCTGTATGTAAAAAC+AGG - chr5.1:37986410-37986429 MS.gene62098:CDS 30.0%
ATTGTTGAAGATACTATGCT+TGG - chr5.1:37987895-37987914 MS.gene62098:intron 30.0%
CAATAAAAAAGAATCAGGAG+AGG + chr5.1:37986626-37986645 None:intergenic 30.0%
CATCTATTCAACCTTCATTT+AGG + chr5.1:37986918-37986937 None:intergenic 30.0%
CTTGGATCAAAATTCCAAAT+TGG + chr5.1:37986384-37986403 None:intergenic 30.0%
TCTATGCAATTAGACAAAGA+CGG - chr5.1:37986865-37986884 MS.gene62098:intron 30.0%
! AGTGAAAACCACCAATTTTA+AGG + chr5.1:37986771-37986790 None:intergenic 30.0%
!! AAAACCACCAATTTTAAGGA+TGG + chr5.1:37986767-37986786 None:intergenic 30.0%
!! TTTGGAATTTTGATCCAAGT+AGG - chr5.1:37986385-37986404 MS.gene62098:CDS 30.0%
!!! TATACTCTTTTGGGGTTTTT+TGG + chr5.1:37987672-37987691 None:intergenic 30.0%
!!! TTGATCGAGTTTTTTTACTC+AGG - chr5.1:37987943-37987962 MS.gene62098:CDS 30.0%
AATGGACACTAGAAGAAGAT+AGG - chr5.1:37986308-37986327 MS.gene62098:CDS 35.0%
AATGGGTAAAGATTGCCAAA+AGG - chr5.1:37987518-37987537 MS.gene62098:intron 35.0%
ACTATGTGTGTGTATTTGCA+TGG + chr5.1:37987060-37987079 None:intergenic 35.0%
AGTAAGTGAGACCTAAATGA+AGG - chr5.1:37986904-37986923 MS.gene62098:intron 35.0%
ATACAGAGACATAACCTACT+TGG + chr5.1:37986402-37986421 None:intergenic 35.0%
ATGTTTGGTAGACTTGTCAA+TGG - chr5.1:37987093-37987112 MS.gene62098:intron 35.0%
CCAACATTGTAAAAGGACAA+TGG - chr5.1:37986290-37986309 MS.gene62098:CDS 35.0%
GTCACTAGCTAATGTACAAT+CGG + chr5.1:37986693-37986712 None:intergenic 35.0%
TAAAAAAAGAATCAGGGGTG+TGG + chr5.1:37986575-37986594 None:intergenic 35.0%
TTCTCTTTGTTGCATACCAA+TGG + chr5.1:37987576-37987595 None:intergenic 35.0%
! AGTTGATGTTAAGAAAGAGC+TGG - chr5.1:37987918-37987937 MS.gene62098:CDS 35.0%
! CCATTGTCCTTTTACAATGT+TGG + chr5.1:37986293-37986312 None:intergenic 35.0%
! TCATCTAAGGCCAGATATTA+AGG - chr5.1:37986537-37986556 MS.gene62098:CDS 35.0%
!! AGCGATGGATTAATCATCTA+AGG - chr5.1:37986524-37986543 MS.gene62098:CDS 35.0%
!! ATCTAAAGTGAGGGTTTTAG+TGG - chr5.1:37987011-37987030 MS.gene62098:intron 35.0%
!! TCAAAAAGAAAGTACCCTAG+TGG - chr5.1:37987604-37987623 MS.gene62098:intron 35.0%
AAGATTGCCAAAAGGTTACC+TGG - chr5.1:37987526-37987545 MS.gene62098:intron 40.0%
AGATTGCCAAAAGGTTACCT+GGG - chr5.1:37987527-37987546 MS.gene62098:intron 40.0%
AGTGGCATTATCCTTACCTT+TGG - chr5.1:37987029-37987048 MS.gene62098:intron 40.0%
ATGAAAGCTCATGGAGAGTT+GGG - chr5.1:37987490-37987509 MS.gene62098:intron 40.0%
ATGGAGAGTTGGGAAACAAA+TGG - chr5.1:37987500-37987519 MS.gene62098:intron 40.0%
CAGAAATTGCCTGGTAGAAT+GGG - chr5.1:37986487-37986506 MS.gene62098:CDS 40.0%
GATATTGCTCAGAAATTGCC+TGG - chr5.1:37986478-37986497 MS.gene62098:CDS 40.0%
GCTCTCTTATCTCTCTCAAA+AGG + chr5.1:37987124-37987143 None:intergenic 40.0%
GCTTATTGCAGAAGGACATA+TGG - chr5.1:37987443-37987462 MS.gene62098:intron 40.0%
GTGGCATTATCCTTACCTTT+GGG - chr5.1:37987030-37987049 MS.gene62098:intron 40.0%
TATTTGCATGGCAAACCCAA+AGG + chr5.1:37987048-37987067 None:intergenic 40.0%
TCAGAAATTGCCTGGTAGAA+TGG - chr5.1:37986486-37986505 MS.gene62098:CDS 40.0%
TGCAATAAGCCACAACAAGA+GGG + chr5.1:37987433-37987452 None:intergenic 40.0%
TGGAGAGTTGGGAAACAAAT+GGG - chr5.1:37987501-37987520 MS.gene62098:intron 40.0%
TGTACATTAGCTAGTGACCT+AGG - chr5.1:37986695-37986714 MS.gene62098:CDS 40.0%
TTGTTGTGGCTTATTGCAGA+AGG - chr5.1:37987435-37987454 MS.gene62098:intron 40.0%
! ATTGAGTTTTCAGTTCTCCC+AGG + chr5.1:37987547-37987566 None:intergenic 40.0%
! TGGTTTTCACTAACCTAGCA+TGG - chr5.1:37986780-37986799 MS.gene62098:intron 40.0%
! TGTTGGTGGATCTAAAGTGA+GGG - chr5.1:37987002-37987021 MS.gene62098:intron 40.0%
!! AGTGAGTGTTTGCTATCAAG+TGG - chr5.1:37987781-37987800 MS.gene62098:CDS 40.0%
!! CTAAAAGTACCCTCTTGTTG+TGG - chr5.1:37987421-37987440 MS.gene62098:intron 40.0%
!! GTAGAAGAGTACTTCCACTA+GGG + chr5.1:37987621-37987640 None:intergenic 40.0%
!! TGTAGAAGAGTACTTCCACT+AGG + chr5.1:37987622-37987641 None:intergenic 40.0%
AAGGAGACATACACCATGCT+AGG + chr5.1:37986796-37986815 None:intergenic 45.0%
ACTGAGCTGATACTGTGCTT+TGG + chr5.1:37987744-37987763 None:intergenic 45.0%
AGCTGATACTGTGCTTTGGT+TGG + chr5.1:37987740-37987759 None:intergenic 45.0%
CTGCAATAAGCCACAACAAG+AGG + chr5.1:37987434-37987453 None:intergenic 45.0%
GAAAACAGTGTAGAGAGCGA+TGG - chr5.1:37986509-37986528 MS.gene62098:CDS 45.0%
GATACTGTGCTTTGGTTGGT+TGG + chr5.1:37987736-37987755 None:intergenic 45.0%
GATGAAAGCTCATGGAGAGT+TGG - chr5.1:37987489-37987508 MS.gene62098:intron 45.0%
TAGCAAACACTCACTGTCAC+TGG + chr5.1:37987776-37987795 None:intergenic 45.0%
! AGTTCTCCCAGGTAACCTTT+TGG + chr5.1:37987536-37987555 None:intergenic 45.0%
! CACTGTTTTCCCATTCTACC+AGG + chr5.1:37986499-37986518 None:intergenic 45.0%
! GTGTTGGTGGATCTAAAGTG+AGG - chr5.1:37987001-37987020 MS.gene62098:intron 45.0%
GCAGAAGGACATATGGAGTG+AGG - chr5.1:37987450-37987469 MS.gene62098:intron 50.0%
GCATGGCAAACCCAAAGGTA+AGG + chr5.1:37987043-37987062 None:intergenic 50.0%
TGGCAAACACTCGCTGTCAC+TGG + chr5.1:37987716-37987735 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 37986271 37987972 37986271 ID=MS.gene62098
chr5.1 mRNA 37986271 37987972 37986271 ID=MS.gene62098.t1;Parent=MS.gene62098
chr5.1 exon 37987914 37987972 37987914 ID=MS.gene62098.t1.exon1;Parent=MS.gene62098.t1
chr5.1 CDS 37987914 37987972 37987914 ID=cds.MS.gene62098.t1;Parent=MS.gene62098.t1
chr5.1 exon 37987685 37987811 37987685 ID=MS.gene62098.t1.exon2;Parent=MS.gene62098.t1
chr5.1 CDS 37987685 37987811 37987685 ID=cds.MS.gene62098.t1;Parent=MS.gene62098.t1
chr5.1 exon 37986271 37986789 37986271 ID=MS.gene62098.t1.exon3;Parent=MS.gene62098.t1
chr5.1 CDS 37986271 37986789 37986271 ID=cds.MS.gene62098.t1;Parent=MS.gene62098.t1
Gene Sequence

>MS.gene62098

ATGACCAGAAACAATAAGTCCAACATTGTAAAAGGACAATGGACACTAGAAGAAGATAGGTACATATAAAAATATCATTTACTTTTTCTGTCGCTGTTTTATATTTTTTACCAATTTGGAATTTTGATCCAAGTAGGTTATGTCTCTGTATGTAAAAACAGGTTGTTGATAAATTTGGTTGAACAATATGGATTGAGAAAATGGACTGATATTGCTCAGAAATTGCCTGGTAGAATGGGAAAACAGTGTAGAGAGCGATGGATTAATCATCTAAGGCCAGATATTAAGGTGCATATTTAGACCACACCCCTGATTCTTTTTTTAGTATTTCTCATGTGTACTTGTGTTCAGACCTCTCCTGATTCTTTTTTATTGAATTTTTTAGACCTTTATAAAAAAAAGTTATATGATTAGATTTTCCGATTGTACATTAGCTAGTGACCTAGGTTCAATCTTGAAATTCTTGTACGCTATAATAAAATGTATAAAAATACCATCCTTAAAATTGGTGGTTTTCACTAACCTAGCATGGTGTATGTCTCCTTTAATCTAGATTTTTATAGGTATAAAAAATACAAATAATGATGTAGAATTTCTATGCAATTAGACAAAGACGGCCTAATAACTTTTAATAGTAAGTGAGACCTAAATGAAGGTTGAATAGATGTGATTTTTTTATTAGAATAAATATTACGTCTTTTTCTTGTAAAATTTATTGAAAAATAAATTTGTGTTGGTGGATCTAAAGTGAGGGTTTTAGTGGCATTATCCTTACCTTTGGGTTTGCCATGCAAATACACACACATAGTATTACAAAGAAAAATGTTTGGTAGACTTGTCAATGGTGTAACCTTTTGAGAGAGATAAGAGAGCGTGATGTGATATATTGATGATTTGATAAAAGGAAAAAAGATCGAGAGAAAATGAAGTATTGAATGAATGTAGTGATATTTGGGGTGTCCCAAATACTATTGTTGAGTTAGATATCTAGCATACATTTATTTCACATGTTATATGTTTTCATTTTCACTTCAACTAATAAATATTAGAGAATATAATTTAATTTTTCTAACTATTTTCTTTTATAATATTTTTTAAAACAGATCCCGCTAGCATTTTAGAAAATTTACAAAATGTCAAAACACTGTTTCTAAAAGTACCCTCTTGTTGTGGCTTATTGCAGAAGGACATATGGAGTGAGGAAGAAGAAAAAATATTGATGAAAGCTCATGGAGAGTTGGGAAACAAATGGGTAAAGATTGCCAAAAGGTTACCTGGGAGAACTGAAAACTCAATTAAGAACCATTGGTATGCAACAAAGAGAAGAGAATATTCAAAAAGAAAGTACCCTAGTGGAAGTACTCTTCTACAAGAATATATCAAGAGCTTGAACTTAGACCAAAAAACCCCAAAAGAGTATACAAGAAAATCTTCAACTAAAGCCAGTGACAGCGAGTGTTTGCCAACCAACCAAAGCACAGTATCAGCTCAGTCTCAGAAAGCCAGTGACAGTGAGTGTTTGCTATCAAGTGGTGATTTTGATGATGATATCCTAGATATTTGTTTCGATGATAATTTGTTTCAAGATGGGTGTAGTATTGATTCTCTGTTAGATGATATGCAAATTGTTGAAGATACTATGCTTGGAGTTGATGTTAAGAAAGAGCTGGATTTGATCGAGTTTTTTTACTCAGGTCAATGA
Protein sequence

>MS.gene62098.t1

MTRNNKSNIVKGQWTLEEDRLLINLVEQYGLRKWTDIAQKLPGRMGKQCRERWINHLRPDIKKDIWSEEEEKILMKAHGELGNKWVKIAKRLPGRTENSIKNHWYATKRREYSKRKYPSGSTLLQEYIKSLNLDQKTPKEYTRKSSTKASDSECLPTNQSTVSAQSQKASDSECLLSSGDFDDDILDICFDDNLFQDGCSIDSLLDDMQIVEDTMLGVDVKKELDLIEFFYSGQ