AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62210.t1 MTR_3g067910 89.815 108 11 0 21 128 2 109 1.04e-69 204
MS.gene62210.t1 MTR_2g085280 73.171 123 33 0 1 123 1 123 8.03e-61 187
MS.gene62210.t1 MTR_2g085250 73.171 123 33 0 1 123 1 123 9.05e-61 186
MS.gene62210.t1 MTR_5g045560 77.049 122 28 0 1 122 1 122 3.43e-60 185
MS.gene62210.t1 MTR_3g052870 72.358 123 34 0 1 123 1 123 2.61e-59 182
MS.gene62210.t1 MTR_1g105920 72.358 123 34 0 1 123 1 123 4.69e-59 182
MS.gene62210.t1 MTR_1g077360 71.311 122 35 0 1 122 1 122 2.84e-58 180
MS.gene62210.t1 MTR_8g043650 70.732 123 36 0 1 123 1 123 4.69e-58 179
MS.gene62210.t1 MTR_5g053390 72.656 128 35 0 1 128 1 128 5.96e-58 179
MS.gene62210.t1 MTR_1g075600 70.312 128 38 0 1 128 1 128 1.87e-57 178
MS.gene62210.t1 MTR_5g055100 71.545 123 35 0 1 123 1 123 3.37e-57 177
MS.gene62210.t1 MTR_1g105910 70.833 120 35 0 1 120 1 120 2.37e-56 175
MS.gene62210.t1 MTR_3g052920 69.106 123 38 0 1 123 1 123 7.04e-56 174
MS.gene62210.t1 MTR_1g106070 69.106 123 38 0 1 123 1 123 1.23e-55 172
MS.gene62210.t1 MTR_2g030740 69.106 123 38 0 1 123 1 123 1.55e-55 173
MS.gene62210.t1 MTR_1g108510 67.480 123 40 0 1 123 1 123 1.90e-53 167
MS.gene62210.t1 MTR_1g012570 69.919 123 37 0 1 123 1 123 4.13e-53 167
MS.gene62210.t1 MTR_3g030770 67.480 123 40 0 1 123 1 123 4.26e-53 167
MS.gene62210.t1 MTR_1g108580 65.854 123 42 0 1 123 1 123 2.57e-52 165
MS.gene62210.t1 MTR_2g093190 67.480 123 40 0 1 123 1 123 2.74e-52 164
MS.gene62210.t1 MTR_0121s0100 63.415 123 45 0 1 123 1 123 1.12e-49 155
MS.gene62210.t1 MTR_3g030780 60.976 123 48 0 1 123 1 123 6.54e-49 153
MS.gene62210.t1 MTR_0121s0080 61.789 123 47 0 1 123 1 123 5.38e-46 149
MS.gene62210.t1 MTR_1g105905 64.762 105 37 0 18 122 1 105 1.36e-42 140
MS.gene62210.t1 MTR_3g080940 52.500 120 57 0 9 128 9 128 8.79e-38 127
MS.gene62210.t1 MTR_1g075570 61.321 106 27 1 18 123 1 92 1.82e-35 120
MS.gene62210.t1 MTR_7g062350 51.181 127 61 1 3 128 14 140 4.18e-34 119
MS.gene62210.t1 MTR_3g067915 81.250 64 12 0 60 123 30 93 9.11e-33 111
MS.gene62210.t1 MTR_3g067875 82.143 56 10 0 18 73 1 56 1.48e-25 92.0
MS.gene62210.t1 MTR_2g105290 49.351 77 39 0 1 77 4 80 2.58e-21 84.3
MS.gene62210.t1 MTR_1g108500 44.444 117 42 2 3 117 89 184 2.94e-21 87.0
MS.gene62210.t1 MTR_8g086290 47.126 87 39 1 4 90 7 86 3.56e-21 84.0
MS.gene62210.t1 MTR_3g067870 68.254 63 20 0 16 78 83 145 6.08e-21 82.8
MS.gene62210.t1 MTR_1g047550 49.296 71 36 0 9 79 2 72 2.33e-20 82.0
MS.gene62210.t1 MTR_8g079502 49.296 71 36 0 9 79 2 72 6.80e-20 80.9
MS.gene62210.t1 MTR_4g131030 36.842 114 57 2 9 107 2 115 2.41e-19 80.1
MS.gene62210.t1 MTR_8g051580 44.304 79 44 0 9 87 2 80 5.65e-19 78.2
MS.gene62210.t1 MTR_7g028448 51.948 77 37 0 4 80 7 83 1.08e-18 77.4
MS.gene62210.t1 MTR_4g036915 51.948 77 37 0 4 80 7 83 1.08e-18 77.4
MS.gene62210.t1 MTR_1g063160 41.772 79 46 0 9 87 2 80 1.58e-18 77.0
MS.gene62210.t1 MTR_1g054265 44.304 79 44 0 9 87 2 80 2.06e-18 76.6
MS.gene62210.t1 MTR_8g046350 43.662 71 40 0 9 79 2 72 2.08e-17 73.9
MS.gene62210.t1 MTR_4g127140 51.948 77 37 0 1 77 4 80 1.65e-16 72.0
MS.gene62210.t1 MTR_4g094632 37.736 106 64 1 9 114 2 105 1.06e-15 69.3
MS.gene62210.t1 MTR_1g053070 48.148 81 42 0 9 89 2 82 1.13e-15 70.9
MS.gene62210.t1 MTR_4g093970 51.515 66 32 0 10 75 29 94 1.18e-15 70.9
MS.gene62210.t1 MTR_0003s0590 51.471 68 33 0 9 76 2 69 1.84e-15 70.5
MS.gene62210.t1 MTR_5g066180 46.479 71 38 0 9 79 2 72 1.92e-15 70.1
MS.gene62210.t1 MTR_3g005530 45.588 68 37 0 9 76 2 69 2.23e-14 67.0
MS.gene62210.t1 MTR_4g102530 45.205 73 40 0 10 82 3 75 2.89e-14 66.6
MS.gene62210.t1 MTR_8g033270 41.837 98 55 1 9 104 2 99 3.04e-14 67.0
MS.gene62210.t1 MTR_2g009890 44.737 76 42 0 9 84 2 77 3.09e-14 67.4
MS.gene62210.t1 MTR_5g031000 47.059 68 36 0 9 76 2 69 1.33e-13 65.1
MS.gene62210.t1 MTR_5g031000 47.059 68 36 0 9 76 2 69 1.69e-13 65.1
MS.gene62210.t1 MTR_5g046790 44.928 69 37 1 9 76 2 70 1.90e-13 64.3
MS.gene62210.t1 MTR_3g452380 43.243 74 42 0 3 76 11 84 1.92e-13 65.1
MS.gene62210.t1 MTR_4g094638 46.377 69 37 0 9 77 2 70 2.09e-13 63.9
MS.gene62210.t1 MTR_7g075870 49.254 67 34 0 10 76 3 69 2.55e-13 63.9
MS.gene62210.t1 MTR_1g101970 48.529 68 35 0 9 76 2 69 3.03e-13 63.5
MS.gene62210.t1 MTR_8g087860 45.588 68 37 0 9 76 18 85 3.31e-13 64.3
MS.gene62210.t1 MTR_5g032150 46.269 67 36 0 10 76 3 69 3.37e-13 63.9
MS.gene62210.t1 MTR_6g464720 47.826 69 35 1 9 76 2 70 3.70e-13 64.3
MS.gene62210.t1 MTR_5g032520 46.269 67 36 0 10 76 3 69 4.77e-13 63.5
MS.gene62210.t1 MTR_2g017865 45.588 68 37 0 9 76 17 84 4.84e-13 63.9
MS.gene62210.t1 MTR_8g066260 43.478 69 38 1 9 76 2 70 7.28e-13 63.2
MS.gene62210.t1 MTR_8g033220 46.377 69 37 0 10 78 3 71 9.88e-13 62.8
MS.gene62210.t1 MTR_8g033220 46.377 69 37 0 10 78 3 71 1.06e-12 62.8
MS.gene62210.t1 MTR_5g066960 47.458 59 31 0 9 67 2 60 1.33e-12 58.9
MS.gene62210.t1 MTR_1g038300 45.714 70 36 1 9 76 2 71 2.51e-12 61.6
MS.gene62210.t1 MTR_4g109830 44.928 69 37 1 9 76 2 70 2.75e-12 61.6
MS.gene62210.t1 MTR_7g075870 48.529 68 34 1 10 76 3 70 3.56e-12 61.2
MS.gene62210.t1 MTR_7g016630 41.667 72 41 1 9 79 2 73 4.98e-12 61.2
MS.gene62210.t1 MTR_7g016600 46.377 69 36 1 9 76 2 70 6.36e-12 60.8
MS.gene62210.t1 MTR_2g461710 48.214 56 29 0 9 64 2 57 7.11e-12 57.0
MS.gene62210.t1 MTR_5g046870 46.377 69 36 1 9 76 2 70 9.05e-12 58.2
MS.gene62210.t1 MTR_4g084740 43.421 76 41 2 9 83 2 76 3.43e-11 59.3
MS.gene62210.t1 MTR_6g015975 43.478 69 38 1 9 76 2 70 5.32e-11 58.2
MS.gene62210.t1 MTR_4g109810 47.458 59 31 0 9 67 2 60 5.99e-11 58.2
MS.gene62210.t1 MTR_8g097090 43.478 69 38 1 9 76 2 70 8.20e-11 57.8
MS.gene62210.t1 MTR_3g102570 39.773 88 51 2 9 95 2 88 9.69e-11 58.2
MS.gene62210.t1 MTR_3g084980 46.667 60 32 0 9 68 2 61 9.70e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62210.t1 AT5G60440 56.198 121 51 1 6 124 4 124 5.48e-39 133
MS.gene62210.t1 AT4G36590 54.630 108 40 2 7 107 5 110 4.00e-29 106
MS.gene62210.t1 AT1G65360 50.980 102 48 1 6 107 4 103 1.78e-25 96.3
MS.gene62210.t1 AT1G01530 50.000 102 49 1 6 107 4 103 2.88e-25 96.3
MS.gene62210.t1 AT2G24840 61.972 71 27 0 9 79 63 133 3.61e-25 96.3
MS.gene62210.t1 AT2G34440 38.739 111 67 1 9 119 2 111 2.45e-20 81.6
MS.gene62210.t1 AT1G72350 50.685 73 34 1 9 81 43 113 9.11e-19 79.0
MS.gene62210.t1 AT3G04100 35.043 117 71 2 6 117 11 127 4.28e-18 76.6
MS.gene62210.t1 AT3G66656 50.000 68 34 0 9 76 2 69 3.21e-17 73.9
MS.gene62210.t1 AT2G45650 51.471 68 33 0 9 76 2 69 4.94e-16 72.0
MS.gene62210.t1 AT5G13790 50.000 68 34 0 9 76 2 69 1.70e-15 70.9
MS.gene62210.t1 AT5G13790 50.000 68 34 0 9 76 2 69 1.79e-15 70.9
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.21e-15 67.4
MS.gene62210.t1 AT5G51870 50.746 67 33 0 10 76 3 69 3.20e-15 69.3
MS.gene62210.t1 AT5G51870 49.296 71 36 0 6 76 22 92 3.62e-15 68.9
MS.gene62210.t1 AT5G51860 50.746 67 33 0 10 76 3 69 3.66e-15 68.9
MS.gene62210.t1 AT5G51870 50.746 67 33 0 10 76 3 69 3.76e-15 68.9
MS.gene62210.t1 AT5G51870 50.746 67 33 0 10 76 13 79 3.93e-15 69.3
MS.gene62210.t1 AT5G51870 50.746 67 33 0 10 76 3 69 4.09e-15 68.2
MS.gene62210.t1 AT3G57390 51.471 68 33 0 9 76 2 69 4.38e-15 68.9
MS.gene62210.t1 AT2G45660 48.529 68 35 0 10 77 3 70 4.64e-15 67.8
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.39e-15 67.4
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.39e-15 67.4
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.39e-15 67.4
MS.gene62210.t1 AT2G22540 42.268 97 51 1 10 101 3 99 5.54e-15 68.9
MS.gene62210.t1 AT2G22540 42.268 97 51 1 10 101 3 99 5.54e-15 68.9
MS.gene62210.t1 AT5G51860 50.746 67 33 0 10 76 3 69 6.09e-15 68.6
MS.gene62210.t1 AT3G57390 51.471 68 33 0 9 76 2 69 6.17e-15 69.3
MS.gene62210.t1 AT3G61120 51.471 68 33 0 9 76 2 69 7.62e-15 68.6
MS.gene62210.t1 AT4G22950 44.737 76 42 0 10 85 3 78 8.68e-15 67.4
MS.gene62210.t1 AT2G45660 48.529 68 35 0 10 77 3 70 9.58e-15 68.2
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.01e-14 67.8
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.01e-14 67.8
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.03e-14 67.8
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.03e-14 67.8
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.03e-14 67.8
MS.gene62210.t1 AT3G57230 47.059 68 36 0 9 76 2 69 1.04e-14 66.6
MS.gene62210.t1 AT4G24540 48.529 68 35 0 9 76 2 69 1.29e-14 67.8
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.54e-14 66.2
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.54e-14 66.2
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.54e-14 66.2
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.54e-14 66.2
MS.gene62210.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.54e-14 66.2
MS.gene62210.t1 AT4G22950 49.254 67 34 0 10 76 3 69 1.83e-14 67.4
MS.gene62210.t1 AT4G22950 49.254 67 34 0 10 76 3 69 1.83e-14 67.4
MS.gene62210.t1 AT4G09960 42.857 77 43 1 1 76 19 95 1.95e-14 67.8
MS.gene62210.t1 AT4G37940 47.059 68 36 0 9 76 2 69 2.54e-14 66.2
MS.gene62210.t1 AT4G18960 44.000 75 42 0 2 76 11 85 2.84e-14 67.4
MS.gene62210.t1 AT4G09960 44.444 72 40 0 5 76 8 79 2.90e-14 67.0
MS.gene62210.t1 AT4G09960 45.588 68 37 0 9 76 2 69 3.14e-14 66.6
MS.gene62210.t1 AT4G09960 45.588 68 37 0 9 76 3 70 3.76e-14 66.6
MS.gene62210.t1 AT4G09960 45.588 68 37 0 9 76 2 69 3.91e-14 66.6
MS.gene62210.t1 AT4G37940 47.059 68 36 0 9 76 2 69 4.05e-14 66.2
MS.gene62210.t1 AT4G37940 47.059 68 36 0 9 76 2 69 4.89e-14 66.2
MS.gene62210.t1 AT4G09960 45.588 68 37 0 9 76 97 164 9.03e-14 66.6
MS.gene62210.t1 AT3G57230 47.059 68 36 0 9 76 2 69 9.29e-14 65.9
MS.gene62210.t1 AT3G57230 47.059 68 36 0 9 76 2 69 9.29e-14 65.9
MS.gene62210.t1 AT2G22630 47.059 68 36 0 9 76 2 69 1.60e-13 65.1
MS.gene62210.t1 AT2G22630 47.059 68 36 0 9 76 2 69 1.60e-13 65.1
MS.gene62210.t1 AT1G26310 44.928 69 37 1 9 76 2 70 2.12e-13 65.1
MS.gene62210.t1 AT5G10140 44.444 72 39 1 9 79 2 73 4.49e-13 63.2
MS.gene62210.t1 AT3G58780 45.070 71 39 0 6 76 14 84 4.62e-13 63.9
MS.gene62210.t1 AT2G42830 45.588 68 37 0 9 76 17 84 4.81e-13 63.9
MS.gene62210.t1 AT2G42830 45.588 68 37 0 9 76 17 84 4.86e-13 63.9
MS.gene62210.t1 AT3G58780 45.070 71 39 0 6 76 20 90 5.20e-13 63.9
MS.gene62210.t1 AT5G10140 44.444 72 39 1 9 79 2 73 5.45e-13 62.4
MS.gene62210.t1 AT5G10140 44.444 72 39 1 9 79 2 73 5.96e-13 62.8
MS.gene62210.t1 AT1G77950 43.421 76 41 2 9 83 2 76 6.20e-13 63.5
MS.gene62210.t1 AT1G77950 43.421 76 41 2 9 83 2 76 6.20e-13 63.5
MS.gene62210.t1 AT1G77950 43.421 76 41 2 9 83 2 76 6.20e-13 63.5
MS.gene62210.t1 AT1G77950 43.421 76 41 2 9 83 2 76 6.20e-13 63.5
MS.gene62210.t1 AT1G69120 42.029 69 39 1 9 76 2 70 6.32e-13 63.5
MS.gene62210.t1 AT1G17310 48.649 74 36 1 8 81 47 118 6.41e-13 63.2
MS.gene62210.t1 AT2G14210 46.377 69 36 1 9 76 2 70 7.69e-13 63.2
MS.gene62210.t1 AT1G28460 31.532 111 76 0 6 116 5 115 7.75e-13 62.4
MS.gene62210.t1 AT5G10140 44.444 72 39 1 9 79 2 73 8.27e-13 62.4
MS.gene62210.t1 AT3G58780 45.070 71 39 0 6 76 14 84 8.77e-13 63.5
MS.gene62210.t1 AT2G14210 46.377 69 36 1 9 76 2 70 8.88e-13 63.2
MS.gene62210.t1 AT1G69120 42.029 69 39 1 9 76 2 70 9.96e-13 63.2
MS.gene62210.t1 AT1G17310 48.649 74 36 1 8 81 58 129 1.01e-12 62.8
MS.gene62210.t1 AT2G22540 41.237 97 47 2 10 101 3 94 1.39e-12 62.4
MS.gene62210.t1 AT1G77980 45.070 71 38 1 9 78 2 72 2.13e-12 62.8
MS.gene62210.t1 AT1G22130 38.043 92 56 1 9 99 2 93 3.31e-12 62.4
MS.gene62210.t1 AT4G11880 45.833 72 38 1 10 80 3 74 3.66e-12 61.2
MS.gene62210.t1 AT4G11880 45.833 72 38 1 10 80 3 74 3.66e-12 61.2
MS.gene62210.t1 AT5G60910 43.478 69 38 1 9 76 2 70 4.70e-12 61.2
MS.gene62210.t1 AT5G23260 43.662 71 38 1 9 77 2 72 5.64e-12 61.2
MS.gene62210.t1 AT5G23260 43.662 71 38 1 9 77 18 88 5.79e-12 61.2
MS.gene62210.t1 AT5G23260 43.662 71 38 1 9 77 18 88 5.94e-12 61.2
MS.gene62210.t1 AT5G23260 43.662 71 38 1 9 77 2 72 6.15e-12 60.8
MS.gene62210.t1 AT4G11880 48.529 68 34 1 10 76 3 70 6.96e-12 59.7
MS.gene62210.t1 AT4G11880 48.529 68 34 1 10 76 3 70 6.96e-12 59.7
MS.gene62210.t1 AT5G15800 44.928 69 37 1 9 76 2 70 7.97e-12 60.5
MS.gene62210.t1 AT3G30260 40.580 69 40 1 9 76 2 70 8.85e-12 60.5
MS.gene62210.t1 AT5G15800 44.928 69 37 1 9 76 2 70 1.20e-11 60.1
MS.gene62210.t1 AT3G02310 43.478 69 38 1 9 76 2 70 2.14e-11 58.9
MS.gene62210.t1 AT5G65050 40.580 69 40 1 9 76 2 70 2.96e-11 58.2
MS.gene62210.t1 AT5G65070 42.029 69 39 1 9 76 2 70 3.59e-11 58.2
MS.gene62210.t1 AT5G65070 42.029 69 39 1 9 76 2 70 3.88e-11 57.0
MS.gene62210.t1 AT2G03710 48.214 56 29 0 9 64 2 57 4.29e-11 57.8
MS.gene62210.t1 AT5G65050 40.580 69 40 1 9 76 2 70 4.95e-11 57.8
MS.gene62210.t1 AT5G65050 40.580 69 40 1 9 76 2 70 5.24e-11 57.4
MS.gene62210.t1 AT1G29962 33.000 100 64 2 6 102 5 104 5.25e-11 57.4
MS.gene62210.t1 AT1G24260 50.000 56 28 0 9 64 2 57 5.34e-11 58.5
MS.gene62210.t1 AT1G24260 50.000 56 28 0 9 64 2 57 5.46e-11 58.2
MS.gene62210.t1 AT1G24260 50.000 56 28 0 9 64 2 57 5.49e-11 58.2
MS.gene62210.t1 AT5G65050 40.580 69 40 1 9 76 2 70 5.82e-11 57.4
MS.gene62210.t1 AT5G65070 42.029 69 39 1 9 76 2 70 6.71e-11 57.8
MS.gene62210.t1 AT2G03710 48.214 56 29 0 9 64 2 57 8.42e-11 57.8
MS.gene62210.t1 AT2G03710 48.214 56 29 0 9 64 2 57 8.82e-11 57.8

Find 16 sgRNAs with CRISPR-Local

Find 25 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCAAGATGCCATTGTTT+TGG 0.345850 3.2:+62523546 None:intergenic
AGCGAGCTTTGCACCCTTTG+TGG 0.386397 3.2:-62523674 MS.gene62210:CDS
CATAAATCGTTATATCTCTC+AGG 0.481105 3.2:-62523576 MS.gene62210:CDS
AATGAGCCTCATTTCGCAGC+TGG 0.487825 3.2:+62523419 None:intergenic
GCATCGTTCTTACGAGTCAA+TGG 0.513645 3.2:+62523479 None:intergenic
AGCAACATATGCACCACAAA+GGG 0.521852 3.2:+62523661 None:intergenic
TATATTCTCACATGGTGAGA+AGG 0.553842 3.2:-62523633 MS.gene62210:CDS
TTTGAGCCAGCTGCGAAATG+AGG 0.560789 3.2:-62523425 None:intergenic
TGGCCACACAAATGTAGAAA+CGG 0.561072 3.2:-62523600 MS.gene62210:CDS
TGACCGTTTCTACATTTGTG+TGG 0.593761 3.2:+62523597 None:intergenic
CAGGTCCCACCCCAAAACAA+TGG 0.630259 3.2:-62523557 MS.gene62210:CDS
GAGCAACATATGCACCACAA+AGG 0.640810 3.2:+62523660 None:intergenic
GCTCTAATTATATTCTCACA+TGG 0.659782 3.2:-62523641 MS.gene62210:CDS
TCGAGTCGAATGAAAACTCG+AGG 0.674187 3.2:-62523788 MS.gene62210:CDS
CTGGCTCAAACTCATTACAA+CGG 0.719918 3.2:+62523438 None:intergenic
TGGCATCTTGCAATTCATCG+AGG 0.757727 3.2:-62523537 MS.gene62210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTTTTTCATCTCAATCTTT+TGG + chr3.2:62523459-62523478 None:intergenic 25.0%
CATAAATCGTTATATCTCTC+AGG - chr3.2:62523642-62523661 MS.gene62210:CDS 30.0%
GCTCTAATTATATTCTCACA+TGG - chr3.2:62523577-62523596 MS.gene62210:CDS 30.0%
TATATTCTCACATGGTGAGA+AGG - chr3.2:62523585-62523604 MS.gene62210:CDS 35.0%
! ATTGCAAGATGCCATTGTTT+TGG + chr3.2:62523675-62523694 None:intergenic 35.0%
! TTGCAAGATGCCATTGTTTT+GGG + chr3.2:62523674-62523693 None:intergenic 35.0%
!!! GGTGAGAAGGTTTTTTCATT+TGG - chr3.2:62523598-62523617 MS.gene62210:CDS 35.0%
AGCAACATATGCACCACAAA+GGG + chr3.2:62523560-62523579 None:intergenic 40.0%
CTGGCTCAAACTCATTACAA+CGG + chr3.2:62523783-62523802 None:intergenic 40.0%
TGACCGTTTCTACATTTGTG+TGG + chr3.2:62523624-62523643 None:intergenic 40.0%
TGGCCACACAAATGTAGAAA+CGG - chr3.2:62523618-62523637 MS.gene62210:CDS 40.0%
!! CTATTTTGAAGAGCCCACTA+TGG + chr3.2:62523522-62523541 None:intergenic 40.0%
!! TGCAAGATGCCATTGTTTTG+GGG + chr3.2:62523673-62523692 None:intergenic 40.0%
!!! ACTTTTTCGAAGCTCCATAG+TGG - chr3.2:62523505-62523524 MS.gene62210:CDS 40.0%
!!! CTTTTTCGAAGCTCCATAGT+GGG - chr3.2:62523506-62523525 MS.gene62210:CDS 40.0%
GAGCAACATATGCACCACAA+AGG + chr3.2:62523561-62523580 None:intergenic 45.0%
GCATCGTTCTTACGAGTCAA+TGG + chr3.2:62523742-62523761 None:intergenic 45.0%
GCTTCGAAAAAGTCACTTGC+AGG + chr3.2:62523498-62523517 None:intergenic 45.0%
TCGAGTCGAATGAAAACTCG+AGG - chr3.2:62523430-62523449 MS.gene62210:CDS 45.0%
TGGCATCTTGCAATTCATCG+AGG - chr3.2:62523681-62523700 MS.gene62210:CDS 45.0%
!! GCTTGCTCACTTTTGCGTTA+CGG + chr3.2:62523711-62523730 None:intergenic 45.0%
!!! AAGATGCCATTGTTTTGGGG+TGG + chr3.2:62523670-62523689 None:intergenic 45.0%
!!! AGATGCCATTGTTTTGGGGT+GGG + chr3.2:62523669-62523688 None:intergenic 45.0%
AGCGAGCTTTGCACCCTTTG+TGG - chr3.2:62523544-62523563 MS.gene62210:CDS 55.0%
CAGGTCCCACCCCAAAACAA+TGG - chr3.2:62523661-62523680 MS.gene62210:CDS 55.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 62523427 62523813 62523427 ID=MS.gene62210
chr3.2 mRNA 62523427 62523813 62523427 ID=MS.gene62210.t1;Parent=MS.gene62210
chr3.2 exon 62523427 62523813 62523427 ID=MS.gene62210.t1.exon1;Parent=MS.gene62210.t1
chr3.2 CDS 62523427 62523813 62523427 ID=cds.MS.gene62210.t1;Parent=MS.gene62210.t1
Gene Sequence

>MS.gene62210

ATGTCGAGTCGAATGAAAACTCGAGGTCGCCAAAAGATTGAGATGAAAAAGATGAGAAATGAAAGCAGCCTGCAAGTGACTTTTTCGAAGCTCCATAGTGGGCTCTTCAAAATAGCTAGCGAGCTTTGCACCCTTTGTGGTGCATATGTTGCTCTAATTATATTCTCACATGGTGAGAAGGTTTTTTCATTTGGCCACACAAATGTAGAAACGGTCATAAATCGTTATATCTCTCAGGTCCCACCCCAAAACAATGGCATCTTGCAATTCATCGAGGCATACCGTAACGCAAAAGTGAGCAAGCTCAATGCTCCATTGACTCGTAAGAACGATGCACTAGACATCGAGAAGAACCGTTGTAATGAGTTTGAGCCAGCTGCGAAATGA
Protein sequence

>MS.gene62210.t1

MSSRMKTRGRQKIEMKKMRNESSLQVTFSKLHSGLFKIASELCTLCGAYVALIIFSHGEKVFSFGHTNVETVINRYISQVPPQNNGILQFIEAYRNAKVSKLNAPLTRKNDALDIEKNRCNEFEPAAK