AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62373

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62373.t1 MTR_6g027360 80.675 326 25 4 1 306 1 308 1.10e-178 496
MS.gene62373.t1 MTR_6g027340 68.571 245 22 2 77 306 1 205 3.15e-108 313
MS.gene62373.t1 MTR_6g027370 54.645 366 87 11 1 306 1 347 2.38e-101 301
MS.gene62373.t1 MTR_7g086960 41.045 268 101 8 91 304 88 352 7.30e-37 135
MS.gene62373.t1 MTR_3g089045 53.846 104 33 1 92 180 16 119 2.71e-30 116
MS.gene62373.t1 MTR_4g082040 48.246 114 44 1 90 188 103 216 4.26e-30 118
MS.gene62373.t1 MTR_5g041570 41.844 141 64 3 73 198 117 254 6.24e-30 118
MS.gene62373.t1 MTR_6g074860 46.018 113 46 1 90 187 2 114 6.21e-29 111
MS.gene62373.t1 MTR_4g019370 41.053 95 41 1 92 171 38 132 2.30e-19 87.4
MS.gene62373.t1 MTR_5g082910 28.467 137 82 2 81 202 9 144 2.03e-16 78.2
MS.gene62373.t1 MTR_3g463400 36.283 113 57 1 77 174 118 230 8.35e-16 77.8
MS.gene62373.t1 MTR_3g101290 36.170 94 45 1 92 170 37 130 2.05e-15 74.3
MS.gene62373.t1 MTR_5g016510 33.684 95 48 1 92 171 5 99 3.07e-15 75.1
MS.gene62373.t1 MTR_4g100720 43.023 86 47 2 77 161 1 85 4.35e-14 69.7
MS.gene62373.t1 MTR_4g094982 33.684 95 48 1 92 171 5 99 4.38e-14 71.2
MS.gene62373.t1 MTR_7g061330 38.000 100 47 1 87 171 108 207 5.92e-14 72.4
MS.gene62373.t1 MTR_7g461410 38.000 100 47 1 87 171 108 207 5.92e-14 72.4
MS.gene62373.t1 MTR_6g015455 34.375 96 48 1 92 172 5 100 6.47e-14 72.8
MS.gene62373.t1 MTR_5g070020 47.143 70 37 0 90 159 120 189 7.27e-14 71.6
MS.gene62373.t1 MTR_7g061330 38.384 99 46 1 87 170 72 170 8.08e-14 72.0
MS.gene62373.t1 MTR_5g049190 42.683 82 45 1 80 159 5 86 8.97e-14 70.1
MS.gene62373.t1 MTR_3g077650 43.243 74 42 0 86 159 175 248 1.18e-13 71.2
MS.gene62373.t1 MTR_1g026870 36.364 99 48 1 87 170 80 178 2.51e-13 70.9
MS.gene62373.t1 MTR_5g062790 28.111 217 109 7 88 286 7 194 3.98e-13 68.9
MS.gene62373.t1 MTR_3g110028 34.783 115 57 2 87 186 80 191 6.77e-13 69.7
MS.gene62373.t1 MTR_4g105660 41.333 75 44 0 86 160 174 248 1.42e-12 68.2
MS.gene62373.t1 MTR_7g035350 30.964 197 113 6 86 280 219 394 1.81e-12 67.8
MS.gene62373.t1 MTR_5g042030 38.462 91 51 2 86 175 3 89 2.39e-12 66.6
MS.gene62373.t1 MTR_1g100667 40.206 97 40 3 92 171 15 110 2.68e-12 66.2
MS.gene62373.t1 MTR_1g085040 42.857 77 41 2 90 164 12 87 2.99e-12 67.0
MS.gene62373.t1 MTR_7g111290 44.595 74 38 2 90 161 12 84 3.55e-12 66.6
MS.gene62373.t1 MTR_4g065017 42.857 77 41 2 87 161 14 89 5.20e-12 65.9
MS.gene62373.t1 MTR_4g088015 36.250 80 51 0 85 164 214 293 5.32e-12 66.2
MS.gene62373.t1 MTR_3g074520 46.053 76 38 2 88 161 10 84 5.33e-12 65.9
MS.gene62373.t1 MTR_2g089450 42.045 88 44 3 90 175 12 94 5.43e-12 65.1
MS.gene62373.t1 MTR_2g011660 44.872 78 40 2 86 161 9 85 6.45e-12 65.9
MS.gene62373.t1 MTR_5g010650 35.354 99 49 1 87 170 105 203 8.35e-12 65.9
MS.gene62373.t1 MTR_5g010020 46.269 67 33 2 95 159 17 82 1.15e-11 65.1
MS.gene62373.t1 MTR_7g037260 33.333 117 71 3 50 164 106 217 1.17e-11 65.1
MS.gene62373.t1 MTR_6g012690 30.909 220 120 9 90 289 12 219 1.31e-11 65.1
MS.gene62373.t1 MTR_2g064160 40.541 74 41 2 90 161 11 83 1.42e-11 64.7
MS.gene62373.t1 MTR_1g112760 45.833 72 36 2 90 159 13 83 1.43e-11 63.5
MS.gene62373.t1 MTR_2g097910 39.474 76 45 1 90 164 20 95 1.60e-11 64.3
MS.gene62373.t1 MTR_6g055910 39.175 97 41 3 92 171 16 111 1.76e-11 63.9
MS.gene62373.t1 MTR_5g007300 41.026 78 45 1 88 164 62 139 1.92e-11 61.2
MS.gene62373.t1 MTR_2g089420 29.814 161 84 5 87 219 8 167 2.02e-11 64.7
MS.gene62373.t1 MTR_3g461490 41.026 78 43 2 89 164 11 87 2.07e-11 64.3
MS.gene62373.t1 MTR_0193s0090 40.000 90 49 2 90 178 7 92 2.29e-11 62.4
MS.gene62373.t1 MTR_7g451170 38.158 76 47 0 86 161 185 260 2.77e-11 64.3
MS.gene62373.t1 MTR_0247s0040 42.466 73 41 1 90 161 7 79 3.50e-11 61.6
MS.gene62373.t1 MTR_3g077110 42.045 88 44 3 90 175 12 94 3.58e-11 63.5
MS.gene62373.t1 MTR_1g085640 41.892 74 40 2 90 161 12 84 3.73e-11 63.5
MS.gene62373.t1 MTR_6g009430 38.356 73 44 1 88 159 10 82 3.82e-11 63.5
MS.gene62373.t1 MTR_1g057980 39.726 73 44 0 89 161 77 149 4.11e-11 63.2
MS.gene62373.t1 MTR_3g103570 41.333 75 42 2 88 160 10 84 4.12e-11 63.5
MS.gene62373.t1 MTR_7g110830 41.558 77 42 2 90 164 12 87 4.20e-11 63.5
MS.gene62373.t1 MTR_3g028740 36.782 87 52 2 77 161 9 94 4.92e-11 63.2
MS.gene62373.t1 MTR_4g091490 43.590 78 41 2 86 161 9 85 6.51e-11 62.8
MS.gene62373.t1 MTR_8g098860 42.029 69 37 2 95 161 17 84 6.74e-11 62.4
MS.gene62373.t1 MTR_5g079670 43.590 78 41 2 89 164 10 86 7.07e-11 61.2
MS.gene62373.t1 MTR_3g052450 32.727 110 58 2 89 182 39 148 7.15e-11 63.2
MS.gene62373.t1 MTR_1g100653 36.111 108 49 4 90 178 12 118 7.73e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62373.t1 AT4G33450 33.333 234 130 5 92 304 19 247 5.52e-36 130
MS.gene62373.t1 AT1G69560 44.361 133 59 1 75 192 90 222 4.00e-32 122
MS.gene62373.t1 AT1G69560 44.361 133 59 1 75 192 106 238 4.47e-32 122
MS.gene62373.t1 AT1G26780 46.875 128 52 2 90 202 96 222 4.72e-30 115
MS.gene62373.t1 AT1G17950 50.000 106 38 1 90 180 3 108 1.20e-29 113
MS.gene62373.t1 AT1G26780 46.875 128 52 2 90 202 96 222 1.30e-29 115
MS.gene62373.t1 AT1G73410 50.476 105 37 1 91 180 5 109 8.63e-26 102
MS.gene62373.t1 AT1G73410 50.476 105 37 1 91 180 5 109 9.74e-26 102
MS.gene62373.t1 AT5G17800 44.715 123 52 2 74 180 74 196 2.41e-25 103
MS.gene62373.t1 AT3G29020 42.982 114 50 1 90 188 63 176 3.27e-25 101
MS.gene62373.t1 AT3G29020 42.982 114 50 1 90 188 65 178 1.10e-24 101
MS.gene62373.t1 AT3G55730 32.895 152 73 3 92 225 56 196 5.10e-17 81.3
MS.gene62373.t1 AT5G67300 36.170 94 45 1 92 170 6 99 1.66e-16 79.0
MS.gene62373.t1 AT4G37260 35.644 101 50 1 86 171 7 107 1.95e-16 79.0
MS.gene62373.t1 AT2G39880 35.000 120 52 2 92 196 50 158 9.07e-16 77.4
MS.gene62373.t1 AT5G39700 37.500 112 47 2 93 189 57 160 1.14e-15 74.3
MS.gene62373.t1 AT5G11050 47.222 72 38 0 89 160 102 173 1.64e-15 77.0
MS.gene62373.t1 AT3G09230 30.405 148 75 3 92 223 55 190 4.32e-15 75.5
MS.gene62373.t1 AT5G58850 47.887 71 37 0 89 159 102 172 8.33e-15 74.7
MS.gene62373.t1 AT3G50060 33.684 95 48 1 92 171 6 100 1.56e-14 73.2
MS.gene62373.t1 AT2G23290 34.737 95 47 1 92 171 13 107 3.45e-14 72.0
MS.gene62373.t1 AT5G40360 31.818 110 53 1 90 177 156 265 5.19e-14 72.0
MS.gene62373.t1 AT5G11510 37.000 100 48 1 87 171 76 175 6.06e-14 72.8
MS.gene62373.t1 AT5G11510 37.000 100 48 1 87 171 76 175 6.06e-14 72.8
MS.gene62373.t1 AT5G11510 37.000 100 48 1 87 171 76 175 6.06e-14 72.8
MS.gene62373.t1 AT5G11510 37.000 100 48 1 87 171 76 175 7.21e-14 72.4
MS.gene62373.t1 AT5G11510 37.000 100 48 1 87 171 76 175 7.47e-14 72.4
MS.gene62373.t1 AT3G27785 43.243 74 42 0 86 159 183 256 1.99e-13 70.9
MS.gene62373.t1 AT4G01680 29.530 149 94 4 90 232 12 155 5.94e-13 68.9
MS.gene62373.t1 AT3G53200 42.857 77 41 2 90 164 9 84 6.93e-13 67.4
MS.gene62373.t1 AT5G65230 50.000 76 35 2 88 161 10 84 7.09e-13 68.6
MS.gene62373.t1 AT3G01140 38.596 114 57 4 53 164 28 130 7.53e-13 68.9
MS.gene62373.t1 AT2G25230 31.193 109 60 1 85 178 19 127 1.04e-12 67.0
MS.gene62373.t1 AT4G01680 29.787 141 92 3 90 224 12 151 1.06e-12 67.0
MS.gene62373.t1 AT5G02320 35.000 100 50 1 87 171 122 221 1.11e-12 68.6
MS.gene62373.t1 AT5G02320 35.000 100 50 1 87 171 122 221 1.11e-12 68.6
MS.gene62373.t1 AT4G18770 41.892 74 43 0 86 159 211 284 1.16e-12 68.6
MS.gene62373.t1 AT3G01140 46.753 77 38 2 90 164 12 87 1.42e-12 67.8
MS.gene62373.t1 AT5G02320 35.000 100 50 1 87 171 62 161 1.46e-12 68.2
MS.gene62373.t1 AT1G18570 43.421 76 42 1 90 164 13 88 2.24e-12 67.4
MS.gene62373.t1 AT4G05100 46.753 77 38 2 90 164 13 88 2.94e-12 66.6
MS.gene62373.t1 AT3G09370 35.000 100 50 1 87 171 138 237 3.23e-12 67.4
MS.gene62373.t1 AT3G09370 30.000 110 71 2 49 158 54 157 4.48e-11 63.9
MS.gene62373.t1 AT3G09370 35.000 100 50 1 87 171 125 224 3.35e-12 67.0
MS.gene62373.t1 AT3G09370 30.000 110 71 2 49 158 41 144 5.70e-11 63.5
MS.gene62373.t1 AT3G09370 35.000 100 50 1 87 171 130 229 3.50e-12 67.0
MS.gene62373.t1 AT3G09370 30.000 110 71 2 49 158 46 149 5.63e-11 63.5
MS.gene62373.t1 AT5G07700 46.053 76 40 1 90 164 12 87 3.59e-12 66.6
MS.gene62373.t1 AT5G07700 46.053 76 40 1 90 164 12 87 3.59e-12 66.6
MS.gene62373.t1 AT1G09540 44.156 77 40 2 90 164 12 87 4.04e-12 66.6
MS.gene62373.t1 AT5G61420 44.737 76 41 1 90 164 12 87 4.12e-12 66.6
MS.gene62373.t1 AT1G18710 41.463 82 45 2 85 164 7 87 4.69e-12 65.5
MS.gene62373.t1 AT5G15310 45.205 73 39 1 90 161 12 84 4.88e-12 65.9
MS.gene62373.t1 AT5G15310 45.205 73 39 1 90 161 12 84 5.47e-12 65.9
MS.gene62373.t1 AT1G57560 42.857 77 41 2 90 164 12 87 5.90e-12 65.9
MS.gene62373.t1 AT1G57560 42.857 77 41 2 90 164 12 87 6.36e-12 65.1
MS.gene62373.t1 AT1G63910 47.761 67 32 2 95 159 17 82 6.96e-12 65.9
MS.gene62373.t1 AT5G15310 45.205 73 39 1 90 161 12 84 9.56e-12 64.3
MS.gene62373.t1 AT4G25560 38.144 97 42 3 92 171 12 107 1.03e-11 64.7
MS.gene62373.t1 AT5G60890 42.105 76 43 1 90 164 12 87 1.06e-11 64.7
MS.gene62373.t1 AT5G26660 44.444 72 37 2 90 159 12 82 1.19e-11 65.1
MS.gene62373.t1 AT5G54230 43.421 76 42 1 90 164 12 87 1.48e-11 64.7
MS.gene62373.t1 AT5G10280 42.857 77 41 2 87 161 9 84 1.76e-11 64.3
MS.gene62373.t1 AT4G01680 27.329 161 94 4 90 232 12 167 2.03e-11 64.3
MS.gene62373.t1 AT3G61250 40.909 88 45 3 90 175 12 94 2.20e-11 63.9
MS.gene62373.t1 AT5G14750 39.474 76 45 1 87 161 13 88 2.64e-11 62.4
MS.gene62373.t1 AT4G21440 43.023 86 39 3 78 161 7 84 2.94e-11 63.9
MS.gene62373.t1 AT5G07690 45.070 71 38 1 90 159 12 82 3.11e-11 63.5
MS.gene62373.t1 AT1G74080 40.000 80 47 1 86 164 8 87 3.15e-11 63.5
MS.gene62373.t1 AT5G12870 38.961 77 44 2 90 164 18 93 4.53e-11 62.8
MS.gene62373.t1 AT5G56110 38.202 89 48 3 89 175 11 94 4.78e-11 63.2
MS.gene62373.t1 AT3G08500 38.272 81 49 1 82 161 22 102 5.30e-11 63.2
MS.gene62373.t1 AT4G32730 37.179 78 49 0 87 164 82 159 5.48e-11 63.9
MS.gene62373.t1 AT4G32730 37.179 78 49 0 87 164 82 159 5.48e-11 63.9
MS.gene62373.t1 AT4G32730 37.179 78 49 0 87 164 82 159 5.48e-11 63.9
MS.gene62373.t1 AT4G32730 37.179 78 49 0 87 164 82 159 5.48e-11 63.9
MS.gene62373.t1 AT5G52600 38.158 76 46 1 90 164 12 87 5.78e-11 61.2
MS.gene62373.t1 AT4G32730 37.179 78 49 0 87 164 82 159 6.02e-11 63.5
MS.gene62373.t1 AT3G23250 36.000 100 46 3 90 172 12 110 6.25e-11 62.4
MS.gene62373.t1 AT2G26950 35.526 76 48 1 90 164 16 91 6.92e-11 62.8
MS.gene62373.t1 AT2G47190 39.241 79 47 1 87 164 17 95 7.32e-11 62.0
MS.gene62373.t1 AT4G17785 42.857 77 41 2 90 164 13 88 9.36e-11 62.4
MS.gene62373.t1 AT1G74430 41.463 82 45 2 85 164 7 87 9.55e-11 61.6
MS.gene62373.t1 AT3G30210 33.607 122 57 5 92 190 29 149 9.77e-11 61.6

Find 65 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACAATGGATCAATTT+TGG 0.092531 6.4:+1887924 MS.gene62373:CDS
TCCTCTTCTTCCTTACTTAA+AGG 0.144161 6.4:-1884532 None:intergenic
TGAAATCCCAAAGGGTATTT+TGG 0.182755 6.4:-1883977 None:intergenic
CAGGGAAAATTTGTATATTA+AGG 0.200707 6.4:+1884473 MS.gene62373:intron
TTGCAGCTTCATACACTTCA+TGG 0.313398 6.4:+1884562 MS.gene62373:CDS
TAAGTTTGAATCTGAAAGAT+TGG 0.319297 6.4:-1887869 None:intergenic
CTTTCAGATTCAAACTTAGA+AGG 0.339208 6.4:+1887874 MS.gene62373:CDS
ATCATCTTCTACTCGCCTTC+AGG 0.339703 6.4:+1883870 MS.gene62373:CDS
TGATGGTTATGGTTTGTCTT+TGG 0.356252 6.4:+1883825 MS.gene62373:CDS
GAAAAGTTCAAAATACCCTT+TGG 0.364674 6.4:+1883916 MS.gene62373:CDS
GCCTTTACCTAGTTCTCAAA+TGG 0.365011 6.4:+1884783 MS.gene62373:CDS
AGATGGTTTCCAATGAGCTT+TGG 0.375191 6.4:-1884073 None:intergenic
CTAACCTTTCCAAAGCTCAT+TGG 0.376315 6.4:+1884064 MS.gene62373:CDS
AAAAGTTCAAAATACCCTTT+GGG 0.385798 6.4:+1883917 MS.gene62373:CDS
GAAAAGTCCAAAATACCCTT+TGG 0.391129 6.4:+1883970 MS.gene62373:CDS
AGGCCTAGTGCGGTTGAGAT+TGG 0.392134 6.4:-1884764 None:intergenic
TCTCATAGCACTGCAAGCTT+TGG 0.416114 6.4:-1887797 None:intergenic
CTGACCATGGTGCTAAAGAT+TGG 0.421499 6.4:+1884124 MS.gene62373:CDS
AACTTGAACAATGATGGTTA+TGG 0.427382 6.4:+1883814 MS.gene62373:CDS
AAAAGTCCAAAATACCCTTT+GGG 0.428010 6.4:+1883971 MS.gene62373:CDS
TTGAGATTGGATTCATCAAT+GGG 0.430960 6.4:-1884751 None:intergenic
GGACCATGCTCTCATTAGGT+TGG 0.436179 6.4:-1884014 None:intergenic
TCATTAAACTTGAACAATGA+TGG 0.438303 6.4:+1883808 MS.gene62373:CDS
CTTTGGGATTTCAAACCCTC+TGG 0.446126 6.4:+1883987 MS.gene62373:CDS
ACTATCATCTATTGCAAGAA+AGG 0.451301 6.4:+1884684 MS.gene62373:CDS
AGTATACCCATTTGAGAACT+AGG 0.466439 6.4:-1884790 None:intergenic
GTTGAGATTGGATTCATCAA+TGG 0.470439 6.4:-1884752 None:intergenic
CCTTTACCTAGTTCTCAAAT+GGG 0.473333 6.4:+1884784 MS.gene62373:CDS
CAAAAGAGAACCTTTAAGTA+AGG 0.476977 6.4:+1884522 MS.gene62373:CDS
GAATAATTTCCATGTGATCA+AGG 0.488161 6.4:+1884642 MS.gene62373:CDS
GCCTGCTAGCCTTGATCACA+TGG 0.491072 6.4:-1884651 None:intergenic
TCTTGGAGTAGGTGATACAT+AGG 0.495278 6.4:+1887996 MS.gene62373:CDS
TCATCTTCTACTCGCCTTCA+GGG 0.495680 6.4:+1883871 MS.gene62373:CDS
CAGGGTCATGTTGGTAACAA+TGG 0.497043 6.4:+1883889 MS.gene62373:CDS
GTTCAAGTTTAATGAACTCA+TGG 0.503353 6.4:-1883800 None:intergenic
TCCATGTGATCAAGGCTAGC+AGG 0.512712 6.4:+1884650 MS.gene62373:CDS
AATCCAATCTCAACCGCACT+AGG 0.519569 6.4:+1884761 MS.gene62373:CDS
ACCTTTAAGTAAGGAAGAAG+AGG 0.519621 6.4:+1884531 MS.gene62373:CDS
CCCTTTGGGATTTCGAGTCA+TGG 0.522094 6.4:+1883931 MS.gene62373:CDS
GGAAAATTTGTATATTAAGG+TGG 0.523199 6.4:+1884476 MS.gene62373:CDS
CCCATTTGAGAACTAGGTAA+AGG 0.544335 6.4:-1884784 None:intergenic
TGATCAAGGCTAGCAGGCAA+AGG 0.550472 6.4:+1884656 MS.gene62373:CDS
GTTTCCAATGAGCTTTGGAA+AGG 0.560196 6.4:-1884068 None:intergenic
CTTGGAGTAGGTGATACATA+GGG 0.561107 6.4:+1887997 MS.gene62373:CDS
GATCAAGGCTAGCAGGCAAA+GGG 0.563871 6.4:+1884657 MS.gene62373:CDS
CATTAGGTTGGATCACCAGA+GGG 0.579966 6.4:-1884002 None:intergenic
TTAAGTTTATCATCTTCAGA+TGG 0.581867 6.4:-1884090 None:intergenic
AGGCGAGTAGAAGATGATGA+TGG 0.586415 6.4:-1883865 None:intergenic
TTCATCAATGGGGCTTGTGA+TGG 0.589265 6.4:-1884740 None:intergenic
ACTCGCCTTCAGGGTCATGT+TGG 0.594916 6.4:+1883880 MS.gene62373:CDS
AGAGGGTTTGAAATCCCAAA+GGG 0.597237 6.4:-1883985 None:intergenic
CCATGACTCGAAATCCCAAA+GGG 0.598055 6.4:-1883931 None:intergenic
GATGGAAAAGCTTAAGATTG+CGG 0.599309 6.4:+1887840 MS.gene62373:CDS
GCTTGACAATGTGTACCAGA+TGG 0.609221 6.4:+1887822 MS.gene62373:CDS
GATCCAACCTAATGAGAGCA+TGG 0.615775 6.4:+1884011 MS.gene62373:CDS
TGTTCCAATCTTTAGCACCA+TGG 0.629779 6.4:-1884128 None:intergenic
TCATTAGGTTGGATCACCAG+AGG 0.632806 6.4:-1884003 None:intergenic
GCTGCAACAAACATGAACAA+TGG 0.644822 6.4:+1887913 MS.gene62373:CDS
TTTGGGATTTCGAGTCATGG+TGG 0.646091 6.4:+1883934 MS.gene62373:CDS
ACCATGACTCGAAATCCCAA+AGG 0.646290 6.4:-1883932 None:intergenic
CAGAGGGTTTGAAATCCCAA+AGG 0.648674 6.4:-1883986 None:intergenic
TGTTACCAACATGACCCTGA+AGG 0.662973 6.4:-1883885 None:intergenic
AAACAACTTATCGCTGACCA+TGG 0.667532 6.4:+1884111 MS.gene62373:CDS
AACTAGGTAAAGGCCTAGTG+CGG 0.675780 6.4:-1884774 None:intergenic
TGAGATTGGATTCATCAATG+GGG 0.712534 6.4:-1884750 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr6.4:1885050-1885069 MS.gene62373:intron 0.0%
!! TATATATATATATATATATA+GGG + chr6.4:1886468-1886487 MS.gene62373:intron 0.0%
!! ATATATATACATATACATAT+AGG - chr6.4:1886457-1886476 None:intergenic 10.0%
!! ATATATATATATATATAGTC+AGG - chr6.4:1887682-1887701 None:intergenic 10.0%
!! CCATATATATATATATATAT+AGG - chr6.4:1885052-1885071 None:intergenic 10.0%
!! CCTATATATATATATATATA+TGG + chr6.4:1885516-1885535 MS.gene62373:intron 10.0%
!! TATATATACATATACATATA+GGG - chr6.4:1886456-1886475 None:intergenic 10.0%
!! TATATATATATATATATAGG+GGG + chr6.4:1886522-1886541 MS.gene62373:intron 10.0%
!! TTTCTATGTTATTAATTAAA+TGG - chr6.4:1887446-1887465 None:intergenic 10.0%
!!! GTTTATTTTATTTAATCTAA+TGG - chr6.4:1887610-1887629 None:intergenic 10.0%
!!! TCTACTTAATTTAATTTAAA+GGG - chr6.4:1887470-1887489 None:intergenic 10.0%
!!! TTCTACTTAATTTAATTTAA+AGG - chr6.4:1887471-1887490 None:intergenic 10.0%
!!! TTGATAAATAAAAATTTGTT+AGG - chr6.4:1884200-1884219 None:intergenic 10.0%
!!! TTTTATTGTGTTATATTTTT+AGG + chr6.4:1887739-1887758 MS.gene62373:intron 10.0%
!! ATATATACATATACATATAG+GGG - chr6.4:1886455-1886474 None:intergenic 15.0%
!! CAATAAAAAAATCAACAATA+TGG - chr6.4:1887727-1887746 None:intergenic 15.0%
!! CTTAAGTAAAAAAAAAACAA+GGG - chr6.4:1886017-1886036 None:intergenic 15.0%
!! CTTTGATTAAATATAATGTA+CGG - chr6.4:1887008-1887027 None:intergenic 15.0%
!! GAAAACTAAAATAAACATAA+GGG + chr6.4:1885324-1885343 MS.gene62373:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG - chr6.4:1885343-1885324 None:intergenic 15.0%
!! GAAAACTAAAATAAACATAT+GGG + chr6.4:1885293-1885312 MS.gene62373:intron 15.0%
!! GATTAATAAAAAATTACGAA+TGG + chr6.4:1886158-1886177 MS.gene62373:intron 15.0%
!! TCTTAAGTAAAAAAAAAACA+AGG - chr6.4:1886018-1886037 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG + chr6.4:1885292-1885311 MS.gene62373:intron 15.0%
!! TGAAAACTAAAATAAACATA+AGG - chr6.4:1885311-1885292 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+TGG + chr6.4:1885292-1885311 MS.gene62373:intron 15.0%
!! TGTTTATAATAGAAAAACAT+GGG + chr6.4:1886687-1886706 MS.gene62373:intron 15.0%
!! TTGTTTATAATAGAAAAACA+TGG + chr6.4:1886686-1886705 MS.gene62373:intron 15.0%
!!! AAAATTTTCAAGCAATTTAA+AGG - chr6.4:1884969-1884988 None:intergenic 15.0%
!!! GTTTTTTTTTTTTGTGATAA+TGG + chr6.4:1884444-1884463 MS.gene62373:intron 15.0%
!!! TATCAAGCAATTTTAAATAT+TGG + chr6.4:1884833-1884852 MS.gene62373:intron 15.0%
!!! TGAAAATTTTTAAAACGTAA+GGG - chr6.4:1885153-1885172 None:intergenic 15.0%
!!! TTGAAAATTTTTAAAACGTA+AGG - chr6.4:1885154-1885173 None:intergenic 15.0%
!! AAATAGACCTTCATAAAAAA+TGG + chr6.4:1886411-1886430 MS.gene62373:intron 20.0%
!! CGTACATTATATTTAATCAA+AGG + chr6.4:1887006-1887025 MS.gene62373:intron 20.0%
!! GAAAACTAAAAGAAACATAA+GGG + chr6.4:1885355-1885374 MS.gene62373:intron 20.0%
!! GTATTTATGTCTAAAGAAAA+AGG + chr6.4:1886376-1886395 MS.gene62373:intron 20.0%
!! TGAAAACTAAAAGAAACATA+AGG + chr6.4:1885354-1885373 MS.gene62373:intron 20.0%
!! TGCTTGATAAGATAAAATAA+AGG - chr6.4:1884822-1884841 None:intergenic 20.0%
!!! AAGTTTCGAAATTTTTGTTA+TGG + chr6.4:1886073-1886092 MS.gene62373:intron 20.0%
!!! AATATGGTTTTTGTTGTTAA+CGG - chr6.4:1885919-1885938 None:intergenic 20.0%
!!! CATTTTTTAATATGAGTTTC+AGG - chr6.4:1885956-1885975 None:intergenic 20.0%
!!! CGTTTTAAAAATTTTCAAGT+TGG + chr6.4:1885156-1885175 MS.gene62373:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+CGG + chr6.4:1885097-1885116 MS.gene62373:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG + chr6.4:1885097-1885116 MS.gene62373:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG - chr6.4:1885116-1885097 None:intergenic 20.0%
!!! TGTTTTAGTAAATAACTAGT+AGG + chr6.4:1886865-1886884 MS.gene62373:intron 20.0%
! AAAAGTTCAAAATACCCTTT+GGG + chr6.4:1883917-1883936 MS.gene62373:CDS 25.0%
! AAAATAGACCTTCATGAAAA+AGG - chr6.4:1885563-1885582 None:intergenic 25.0%
! AAATAGACCTTCATGAAAAA+GGG - chr6.4:1885562-1885581 None:intergenic 25.0%
! ATATATATATAGTCAGGATC+CGG - chr6.4:1887676-1887695 None:intergenic 25.0%
! ATGAAAATTGCAATCCATAT+GGG - chr6.4:1887249-1887268 None:intergenic 25.0%
! CAGGGAAAATTTGTATATTA+AGG + chr6.4:1884473-1884492 MS.gene62373:intron 25.0%
! GGAAAATTTGTATATTAAGG+TGG + chr6.4:1884476-1884495 MS.gene62373:CDS 25.0%
! GTATTTATGTCTAAGGAAAA+AGG - chr6.4:1885597-1885616 None:intergenic 25.0%
! TAAGTTTGAATCTGAAAGAT+TGG - chr6.4:1887872-1887891 None:intergenic 25.0%
! TAATGAAAATACTAAGCGTA+CGG - chr6.4:1884348-1884367 None:intergenic 25.0%
! TCATTAAACTTGAACAATGA+TGG + chr6.4:1883808-1883827 MS.gene62373:CDS 25.0%
! TTAAGTTTATCATCTTCAGA+TGG - chr6.4:1884093-1884112 None:intergenic 25.0%
! TTCTCAAAAAGCAAAATCAT+GGG - chr6.4:1885619-1885638 None:intergenic 25.0%
! TTGAAACTTTCAAAACGTAA+GGG + chr6.4:1885384-1885403 MS.gene62373:intron 25.0%
! TTGAAACTTTCAAAACGTAA+GGG - chr6.4:1885403-1885384 None:intergenic 25.0%
! TTTCTCAAAAAGCAAAATCA+TGG - chr6.4:1885620-1885639 None:intergenic 25.0%
! TTTGAGAAAAAGAAAAGGAA+GGG + chr6.4:1885631-1885650 MS.gene62373:intron 25.0%
!! ATGAACAATGGATCAATTTT+GGG + chr6.4:1887925-1887944 MS.gene62373:CDS 25.0%
!! GACAGTTTGATTCTAAAAAT+TGG + chr6.4:1886036-1886055 MS.gene62373:intron 25.0%
!! TAATCTTGCTTCTTTGTTAT+AGG + chr6.4:1885827-1885846 MS.gene62373:intron 25.0%
!! TGAGAAAAAACATCATTTTG+AGG + chr6.4:1887367-1887386 MS.gene62373:intron 25.0%
!! TGATTCTAAAAATTGGATCA+GGG + chr6.4:1886043-1886062 MS.gene62373:intron 25.0%
!! TGGAAAAATGAAGTAGTTTT+TGG + chr6.4:1885879-1885898 MS.gene62373:intron 25.0%
!! TTGATTCTAAAAATTGGATC+AGG + chr6.4:1886042-1886061 MS.gene62373:intron 25.0%
!!! AAAAATTTGTTAGGTAGTGT+AGG - chr6.4:1884191-1884210 None:intergenic 25.0%
!!! AAAACCATATTTAACTTGTG+TGG + chr6.4:1885928-1885947 MS.gene62373:intron 25.0%
!!! AAGTTTTTTTTACTACCGAA+GGG + chr6.4:1887318-1887337 MS.gene62373:intron 25.0%
!!! ATGTCATTTTTTGACTTTCT+TGG + chr6.4:1887979-1887998 MS.gene62373:CDS 25.0%
!!! ATTTTTGTTATGGATTCAAC+TGG + chr6.4:1886083-1886102 MS.gene62373:intron 25.0%
!!! GTTTCTTTTAGTTTTCAAGT+TGG - chr6.4:1885351-1885370 None:intergenic 25.0%
!!! TAAGTTTTTTTTACTACCGA+AGG + chr6.4:1887317-1887336 MS.gene62373:intron 25.0%
!!! TGCTTTTTGAGAAAAAGAAA+AGG + chr6.4:1885626-1885645 MS.gene62373:intron 25.0%
!!! TGTTTTAGTAAAGTACAAGT+AGG - chr6.4:1886600-1886619 None:intergenic 25.0%
!!! TGTTTTGGTAAATAACTAGT+AGG + chr6.4:1886710-1886729 MS.gene62373:intron 25.0%
!!! TTTTGAGAAAAAGAAAAGGA+AGG + chr6.4:1885630-1885649 MS.gene62373:intron 25.0%
!!! TTTTTGTTATGGATTCAACT+GGG + chr6.4:1886084-1886103 MS.gene62373:intron 25.0%
AAAAGTCCAAAATACCCTTT+GGG + chr6.4:1883971-1883990 MS.gene62373:CDS 30.0%
AACAAGGGAAACAATAAGAA+AGG - chr6.4:1886002-1886021 None:intergenic 30.0%
AACATTGCTGAAAAACTACA+AGG + chr6.4:1884150-1884169 MS.gene62373:CDS 30.0%
AACTTGAACAATGATGGTTA+TGG + chr6.4:1883814-1883833 MS.gene62373:CDS 30.0%
ACTATCATCTATTGCAAGAA+AGG + chr6.4:1884684-1884703 MS.gene62373:CDS 30.0%
AGACCTTCATAAAAAATGGT+GGG + chr6.4:1886415-1886434 MS.gene62373:intron 30.0%
AGGCTTACTTCAAAAAAGAA+TGG + chr6.4:1887759-1887778 MS.gene62373:intron 30.0%
ATAAACTAAGACATGAGAGA+AGG - chr6.4:1884996-1885015 None:intergenic 30.0%
ATACACTTCATGGTAACTAA+TGG + chr6.4:1884572-1884591 MS.gene62373:intron 30.0%
ATATGGCTTAATTGCATGTT+TGG + chr6.4:1885066-1885085 MS.gene62373:intron 30.0%
ATCATGGGTATTTATGTCTA+AGG - chr6.4:1886388-1886369 None:intergenic 30.0%
ATGAGAATCGTTGTTAAATG+AGG - chr6.4:1884941-1884960 None:intergenic 30.0%
ATTAACCAAGAGAGAATACA+TGG - chr6.4:1887161-1887180 None:intergenic 30.0%
CAAAAGAGAACCTTTAAGTA+AGG + chr6.4:1884522-1884541 MS.gene62373:CDS 30.0%
CATGAAAATTGCAATCCATA+TGG - chr6.4:1887250-1887269 None:intergenic 30.0%
CTTGAAACTTTCAAAACGTA+AGG + chr6.4:1885383-1885402 MS.gene62373:intron 30.0%
CTTGAAACTTTCAAAACGTA+AGG - chr6.4:1885402-1885383 None:intergenic 30.0%
CTTTCAGATTCAAACTTAGA+AGG + chr6.4:1887874-1887893 MS.gene62373:CDS 30.0%
GAAAAGTTCAAAATACCCTT+TGG + chr6.4:1883916-1883935 MS.gene62373:CDS 30.0%
GAATAATTTCCATGTGATCA+AGG + chr6.4:1884642-1884661 MS.gene62373:CDS 30.0%
TAAAATAAACGGCTCAGATT+TGG + chr6.4:1887620-1887639 MS.gene62373:intron 30.0%
TAAGTAGAAACGTGATTTCA+TGG + chr6.4:1887482-1887501 MS.gene62373:intron 30.0%
TACACTTCATGGTAACTAAT+GGG + chr6.4:1884573-1884592 MS.gene62373:intron 30.0%
TAGACCTTCATAAAAAATGG+TGG + chr6.4:1886414-1886433 MS.gene62373:intron 30.0%
TATAATGTACGGTTGAGATT+TGG - chr6.4:1886997-1887016 None:intergenic 30.0%
TATAGGCTTAATTGCATGTT+TGG - chr6.4:1885502-1885521 None:intergenic 30.0%
TTCTCAAAGAGCAAAATCAT+GGG + chr6.4:1886354-1886373 MS.gene62373:intron 30.0%
TTGAGATTGGATTCATCAAT+GGG - chr6.4:1884754-1884773 None:intergenic 30.0%
TTTCTCAAAGAGCAAAATCA+TGG + chr6.4:1886353-1886372 MS.gene62373:intron 30.0%
TTTGAGAAAGAGAAAAGGAA+GGG - chr6.4:1886342-1886361 None:intergenic 30.0%
! ATAGAAAAACATGGGTGTTT+TGG + chr6.4:1886695-1886714 MS.gene62373:intron 30.0%
! ATGCAATCTGAGTTTTTGAA+TGG - chr6.4:1887103-1887122 None:intergenic 30.0%
! CAATTTTAAATATTGGTGCG+CGG + chr6.4:1884840-1884859 MS.gene62373:intron 30.0%
! CATGAACAATGGATCAATTT+TGG + chr6.4:1887924-1887943 MS.gene62373:CDS 30.0%
! CTGTTTAGCTTCAAAGAATT+TGG + chr6.4:1885859-1885878 MS.gene62373:intron 30.0%
! TGAACAATGGATCAATTTTG+GGG + chr6.4:1887926-1887945 MS.gene62373:CDS 30.0%
! TGTTTTCGTAAAGTACAAGT+AGG - chr6.4:1886755-1886774 None:intergenic 30.0%
!! AATTCTTTGAAGCTAAACAG+AGG - chr6.4:1885859-1885878 None:intergenic 30.0%
!! TTGTGATAATGGTAATTGCA+GGG + chr6.4:1884455-1884474 MS.gene62373:intron 30.0%
!! TTTGTGATAATGGTAATTGC+AGG + chr6.4:1884454-1884473 MS.gene62373:intron 30.0%
!!! ACGTTTTGAAAGTTTCAAGT+TGG + chr6.4:1885126-1885145 MS.gene62373:intron 30.0%
!!! ACGTTTTGAAAGTTTCAAGT+TGG - chr6.4:1885145-1885126 None:intergenic 30.0%
!!! TGATTTTTTGTTTGTACACC+AGG - chr6.4:1887209-1887228 None:intergenic 30.0%
!!! TTTTTTGACTTTCTTGGAGT+AGG + chr6.4:1887985-1888004 MS.gene62373:CDS 30.0%
AAATTGCAATCCATATGGGA+TGG - chr6.4:1887245-1887264 None:intergenic 35.0%
AACGTGATTTCATGGAACTT+TGG + chr6.4:1887490-1887509 MS.gene62373:intron 35.0%
AAGAATCAACAGTGAGAGAA+TGG - chr6.4:1885757-1885776 None:intergenic 35.0%
AATTGCAATCCATATGGGAT+GGG - chr6.4:1887244-1887263 None:intergenic 35.0%
ACCTTTAAGTAAGGAAGAAG+AGG + chr6.4:1884531-1884550 MS.gene62373:CDS 35.0%
AGAAAAAGGAACATGAACGA+GGG + chr6.4:1886207-1886226 MS.gene62373:intron 35.0%
AGAATCAACAGTGAGAGAAT+GGG - chr6.4:1885756-1885775 None:intergenic 35.0%
AGAGCATGGTCCAAAAAAAT+GGG + chr6.4:1884025-1884044 MS.gene62373:CDS 35.0%
AGTATACCCATTTGAGAACT+AGG - chr6.4:1884793-1884812 None:intergenic 35.0%
ATAGTGTGAGATTGAGAGAA+AGG - chr6.4:1887068-1887087 None:intergenic 35.0%
ATCGCCAGAAACAAAATTCA+CGG - chr6.4:1886135-1886154 None:intergenic 35.0%
ATCTTTGATTGAAGCTGCAT+CGG + chr6.4:1884915-1884934 MS.gene62373:intron 35.0%
ATTGGCAGCAATTCAATTTG+AGG - chr6.4:1887185-1887204 None:intergenic 35.0%
CTCTCAATCTCACACTATTA+TGG + chr6.4:1887070-1887089 MS.gene62373:intron 35.0%
CTGGCAACAAGAATAGAAAA+AGG + chr6.4:1886193-1886212 MS.gene62373:intron 35.0%
GAAAAACTACAAGGAAGATC+AGG + chr6.4:1884159-1884178 MS.gene62373:CDS 35.0%
GAAAAGTCCAAAATACCCTT+TGG + chr6.4:1883970-1883989 MS.gene62373:CDS 35.0%
GATGGAAAAGCTTAAGATTG+CGG + chr6.4:1887840-1887859 MS.gene62373:CDS 35.0%
GGATCCACACAAGTTAAATA+TGG - chr6.4:1885935-1885954 None:intergenic 35.0%
GTTGAGATTGGATTCATCAA+TGG - chr6.4:1884755-1884774 None:intergenic 35.0%
TAGAAAAAGGAACATGAACG+AGG + chr6.4:1886206-1886225 MS.gene62373:intron 35.0%
TAGTGTGAGATTGAGAGAAA+GGG - chr6.4:1887067-1887086 None:intergenic 35.0%
TCCTCTTCTTCCTTACTTAA+AGG - chr6.4:1884535-1884554 None:intergenic 35.0%
TGAGATTGGATTCATCAATG+GGG - chr6.4:1884753-1884772 None:intergenic 35.0%
TTCGATACCAAAAATCCCTT+CGG - chr6.4:1887336-1887355 None:intergenic 35.0%
TTTGTTTGTACACCAGGAAT+TGG - chr6.4:1887203-1887222 None:intergenic 35.0%
! AAAAAAATGGGGGGAGTTTT+AGG + chr6.4:1884037-1884056 MS.gene62373:CDS 35.0%
! AAAGGTTCTCTTTTGATGCT+AGG - chr6.4:1884517-1884536 None:intergenic 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG + chr6.4:1886900-1886919 MS.gene62373:intron 35.0%
! ATGGATTCAACTGGGTTTTA+AGG + chr6.4:1886092-1886111 MS.gene62373:intron 35.0%
! CAATCTTAAGCTTTTCCATC+TGG - chr6.4:1887840-1887859 None:intergenic 35.0%
! CACATTTGCAAACATTTTCC+TGG + chr6.4:1884598-1884617 MS.gene62373:intron 35.0%
! CCTTTACCTAGTTCTCAAAT+GGG + chr6.4:1884784-1884803 MS.gene62373:CDS 35.0%
! CTTTGAGAAAGAGAAAAGGA+AGG - chr6.4:1886343-1886362 None:intergenic 35.0%
! GAACAATGGATCAATTTTGG+GGG + chr6.4:1887927-1887946 MS.gene62373:CDS 35.0%
! GAAGCAAGATTAAGAGTGTA+AGG - chr6.4:1885819-1885838 None:intergenic 35.0%
! TGATGGTTATGGTTTGTCTT+TGG + chr6.4:1883825-1883844 MS.gene62373:CDS 35.0%
! TGCTCTTTGAGAAAGAGAAA+AGG - chr6.4:1886347-1886366 None:intergenic 35.0%
! TTCACTAGCTTCCTCAAATT+GGG - chr6.4:1887281-1887300 None:intergenic 35.0%
! TTGTGATGGCAAATTTTGCT+GGG - chr6.4:1884729-1884748 None:intergenic 35.0%
! TTTACTACCGAAGGGATTTT+TGG + chr6.4:1887326-1887345 MS.gene62373:intron 35.0%
! TTTCACTAGCTTCCTCAAAT+TGG - chr6.4:1887282-1887301 None:intergenic 35.0%
! TTTGCAAACATTTTCCTGGA+AGG + chr6.4:1884602-1884621 MS.gene62373:intron 35.0%
!! TCTTCCGTGAATTTTGTTTC+TGG + chr6.4:1886128-1886147 MS.gene62373:intron 35.0%
!! TTCTCTCACTGTTGATTCTT+AGG + chr6.4:1885757-1885776 MS.gene62373:intron 35.0%
!!! AGACCCACCATTTTTTATGA+AGG - chr6.4:1886421-1886440 None:intergenic 35.0%
!!! GCACCTTAGTGTTTTTAGAT+GGG - chr6.4:1886561-1886580 None:intergenic 35.0%
!!! TAAAACTCCCCCCATTTTTT+TGG - chr6.4:1884038-1884057 None:intergenic 35.0%
!!! TGAAATCCCAAAGGGTATTT+TGG - chr6.4:1883980-1883999 None:intergenic 35.0%
!!! TGCACCTTAGTGTTTTTAGA+TGG - chr6.4:1886562-1886581 None:intergenic 35.0%
AAACAACTTATCGCTGACCA+TGG + chr6.4:1884111-1884130 MS.gene62373:CDS 40.0%
AACGGATCCTGTCTCATATA+TGG - chr6.4:1886946-1886965 None:intergenic 40.0%
ACAGTGAGAGAATGGGAAAA+CGG - chr6.4:1885749-1885768 None:intergenic 40.0%
AGACCTTCATGAAAAAGGGT+GGG - chr6.4:1885558-1885577 None:intergenic 40.0%
AGATGGTTTCCAATGAGCTT+TGG - chr6.4:1884076-1884095 None:intergenic 40.0%
AGCATGGTCCAAAAAAATGG+GGG + chr6.4:1884027-1884046 MS.gene62373:CDS 40.0%
ATGAGATCGATCCCAATTTG+AGG + chr6.4:1887267-1887286 MS.gene62373:intron 40.0%
ATTGAATTGCTGCCAATTCC+TGG + chr6.4:1887188-1887207 MS.gene62373:intron 40.0%
CAAGTCGGTCCAAAACATAA+GGG + chr6.4:1885262-1885281 MS.gene62373:intron 40.0%
CAGAGGGAGAAGAAGAAAAA+AGG + chr6.4:1886241-1886260 MS.gene62373:intron 40.0%
CATCTCCATGTATTCTCTCT+TGG + chr6.4:1887153-1887172 MS.gene62373:intron 40.0%
CCCATTTGAGAACTAGGTAA+AGG - chr6.4:1884787-1884806 None:intergenic 40.0%
CTAACCTTTCCAAAGCTCAT+TGG + chr6.4:1884064-1884083 MS.gene62373:CDS 40.0%
GAGCATGGTCCAAAAAAATG+GGG + chr6.4:1884026-1884045 MS.gene62373:CDS 40.0%
GCACCCATCTAAAAACACTA+AGG + chr6.4:1886555-1886574 MS.gene62373:intron 40.0%
GCTGCAACAAACATGAACAA+TGG + chr6.4:1887913-1887932 MS.gene62373:CDS 40.0%
GTTATCTATCCCATCCCATA+TGG + chr6.4:1887232-1887251 MS.gene62373:intron 40.0%
TAGACCTTCATGAAAAAGGG+TGG - chr6.4:1885559-1885578 None:intergenic 40.0%
TCAAGTCGGTCCAAAACATA+AGG + chr6.4:1885261-1885280 MS.gene62373:intron 40.0%
TCTTGGAGTAGGTGATACAT+AGG + chr6.4:1887996-1888015 MS.gene62373:CDS 40.0%
TGAGGAAGCTAGTGAAACTA+GGG + chr6.4:1887285-1887304 MS.gene62373:intron 40.0%
TGTTCCAATCTTTAGCACCA+TGG - chr6.4:1884131-1884150 None:intergenic 40.0%
TTGAGGAAGCTAGTGAAACT+AGG + chr6.4:1887284-1887303 MS.gene62373:intron 40.0%
TTGCAATCAGATGAGTTGCT+GGG + chr6.4:1887547-1887566 MS.gene62373:intron 40.0%
TTGCAGCTTCATACACTTCA+TGG + chr6.4:1884562-1884581 MS.gene62373:CDS 40.0%
TTGGGGGATAGTGAAAATGT+GGG + chr6.4:1887943-1887962 MS.gene62373:CDS 40.0%
TTTGGGGGATAGTGAAAATG+TGG + chr6.4:1887942-1887961 MS.gene62373:CDS 40.0%
! AGAGGGTTTGAAATCCCAAA+GGG - chr6.4:1883988-1884007 None:intergenic 40.0%
! CTTGTGATGGCAAATTTTGC+TGG - chr6.4:1884730-1884749 None:intergenic 40.0%
! GAGAGCATGGTCCAAAAAAA+TGG + chr6.4:1884024-1884043 MS.gene62373:CDS 40.0%
! GCCTTTACCTAGTTCTCAAA+TGG + chr6.4:1884783-1884802 MS.gene62373:CDS 40.0%
! TTTTGGACCATGCTCTCATT+AGG - chr6.4:1884021-1884040 None:intergenic 40.0%
!! GTTTCCAATGAGCTTTGGAA+AGG - chr6.4:1884071-1884090 None:intergenic 40.0%
!!! CAAGTTGGTCCCTTATGTTT+TGG - chr6.4:1885250-1885231 None:intergenic 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG + chr6.4:1886904-1886923 MS.gene62373:intron 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG + chr6.4:1886903-1886922 MS.gene62373:intron 40.0%
AACTAGGTAAAGGCCTAGTG+CGG - chr6.4:1884777-1884796 None:intergenic 45.0%
AATCCAATCTCAACCGCACT+AGG + chr6.4:1884761-1884780 MS.gene62373:CDS 45.0%
ACAGCCTCCATATATGAGAC+AGG + chr6.4:1886936-1886955 MS.gene62373:intron 45.0%
ACCATGACTCGAAATCCCAA+AGG - chr6.4:1883935-1883954 None:intergenic 45.0%
AGGCGAGTAGAAGATGATGA+TGG - chr6.4:1883868-1883887 None:intergenic 45.0%
ATCATCTTCTACTCGCCTTC+AGG + chr6.4:1883870-1883889 MS.gene62373:CDS 45.0%
CAGTGAGAGAATGGGAAAAC+GGG - chr6.4:1885748-1885767 None:intergenic 45.0%
CCATGACTCGAAATCCCAAA+GGG - chr6.4:1883934-1883953 None:intergenic 45.0%
CGAATGGCAGTTCATGAAAC+TGG + chr6.4:1886174-1886193 MS.gene62373:intron 45.0%
GAAAACGGGAGGAAGAACAA+GGG - chr6.4:1885734-1885753 None:intergenic 45.0%
GAGGGAGAGAATGAAACAGA+GGG + chr6.4:1886225-1886244 MS.gene62373:intron 45.0%
GATCCAACCTAATGAGAGCA+TGG + chr6.4:1884011-1884030 MS.gene62373:CDS 45.0%
GCACCCACCTAAAAACACTA+AGG - chr6.4:1886910-1886929 None:intergenic 45.0%
GCATGGTCCAAAAAAATGGG+GGG + chr6.4:1884028-1884047 MS.gene62373:CDS 45.0%
GCTTGACAATGTGTACCAGA+TGG + chr6.4:1887822-1887841 MS.gene62373:CDS 45.0%
GGATCCTGTCTCATATATGG+AGG - chr6.4:1886943-1886962 None:intergenic 45.0%
GTTGCAATCAGATGAGTTGC+TGG + chr6.4:1887546-1887565 MS.gene62373:intron 45.0%
TCAACGAATCCATTGACACC+TGG + chr6.4:1887645-1887664 MS.gene62373:intron 45.0%
TCATCTTCTACTCGCCTTCA+GGG + chr6.4:1883871-1883890 MS.gene62373:CDS 45.0%
TGTTACCAACATGACCCTGA+AGG - chr6.4:1883888-1883907 None:intergenic 45.0%
TTCATCAATGGGGCTTGTGA+TGG - chr6.4:1884743-1884762 None:intergenic 45.0%
! CAGAGGGTTTGAAATCCCAA+AGG - chr6.4:1883989-1884008 None:intergenic 45.0%
! CTGACCATGGTGCTAAAGAT+TGG + chr6.4:1884124-1884143 MS.gene62373:CDS 45.0%
! GGAACTTTGGTGTGTGTTGA+TGG + chr6.4:1887503-1887522 MS.gene62373:intron 45.0%
! TTTGGGATTTCGAGTCATGG+TGG + chr6.4:1883934-1883953 MS.gene62373:CDS 45.0%
!! AGACCCACCCTTTTTCATGA+AGG + chr6.4:1885552-1885571 MS.gene62373:intron 45.0%
!! CAGGGTCATGTTGGTAACAA+TGG + chr6.4:1883889-1883908 MS.gene62373:CDS 45.0%
!! CATTAGGTTGGATCACCAGA+GGG - chr6.4:1884005-1884024 None:intergenic 45.0%
!! CTTTGGGATTTCAAACCCTC+TGG + chr6.4:1883987-1884006 MS.gene62373:CDS 45.0%
!! TCATTAGGTTGGATCACCAG+AGG - chr6.4:1884006-1884025 None:intergenic 45.0%
!! AATATTAAAAAAAAACAATT+TGG - chr6.4:1884255-1884274 None:intergenic 5.0%
!! ATATATATATATATATATAG+GGG + chr6.4:1886521-1886540 MS.gene62373:intron 5.0%
!! ATTAGATTAAATAAAATAAA+CGG + chr6.4:1887609-1887628 MS.gene62373:intron 5.0%
!! CTATATATATATATATATAT+GGG + chr6.4:1885517-1885536 MS.gene62373:intron 5.0%
!! GATATATATATATATATATA+TGG + chr6.4:1885049-1885068 MS.gene62373:intron 5.0%
!! TATATATATATATATATATG+GGG + chr6.4:1885051-1885070 MS.gene62373:intron 5.0%
!!! TAAACTTTATTTTAATTAAA+AGG + chr6.4:1886635-1886654 MS.gene62373:intron 5.0%
!!! TAAACTTTATTTTAATTAAT+AGG + chr6.4:1886790-1886809 MS.gene62373:intron 5.0%
AGTGCATTGTCTGTCCTTCC+AGG - chr6.4:1884619-1884638 None:intergenic 50.0%
CGAGGGAGAGAATGAAACAG+AGG + chr6.4:1886224-1886243 MS.gene62373:intron 50.0%
GATCAAGGCTAGCAGGCAAA+GGG + chr6.4:1884657-1884676 MS.gene62373:CDS 50.0%
GGAAAACGGGAGGAAGAACA+AGG - chr6.4:1885735-1885754 None:intergenic 50.0%
GGACCATGCTCTCATTAGGT+TGG - chr6.4:1884017-1884036 None:intergenic 50.0%
GTCAACGAATCCGTTGACAC+AGG - chr6.4:1886973-1886992 None:intergenic 50.0%
TCCATGTGATCAAGGCTAGC+AGG + chr6.4:1884650-1884669 MS.gene62373:CDS 50.0%
TCCGTTGACACAGGTGTCAA+CGG - chr6.4:1886964-1886983 None:intergenic 50.0%
TCCGTTGACACCTGTGTCAA+CGG + chr6.4:1886960-1886979 MS.gene62373:intron 50.0%
TGAGAGAATGGGAAAACGGG+AGG - chr6.4:1885745-1885764 None:intergenic 50.0%
TGATCAAGGCTAGCAGGCAA+AGG + chr6.4:1884656-1884675 MS.gene62373:CDS 50.0%
!! CCCTTTGGGATTTCGAGTCA+TGG + chr6.4:1883931-1883950 MS.gene62373:CDS 50.0%
!! TGGTGTGTGTTGATGGCAGA+TGG + chr6.4:1887510-1887529 MS.gene62373:intron 50.0%
ACTCGCCTTCAGGGTCATGT+TGG + chr6.4:1883880-1883899 MS.gene62373:CDS 55.0%
AGGCCTAGTGCGGTTGAGAT+TGG - chr6.4:1884767-1884786 None:intergenic 55.0%
!! CCATTGACACCTGGTGTCAC+CGG + chr6.4:1887654-1887673 MS.gene62373:intron 55.0%
!! GCCTGCTAGCCTTGATCACA+TGG - chr6.4:1884654-1884673 None:intergenic 55.0%
AGTCAGGATCCGGTGACACC+AGG - chr6.4:1887666-1887685 None:intergenic 60.0%
CCGGTGACACCAGGTGTCAA+TGG - chr6.4:1887657-1887676 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 1883802 1888017 1883802 ID=MS.gene62373
chr6.4 mRNA 1883802 1888017 1883802 ID=MS.gene62373.t1;Parent=MS.gene62373
chr6.4 exon 1883802 1884180 1883802 ID=MS.gene62373.t1.exon1;Parent=MS.gene62373.t1
chr6.4 CDS 1883802 1884180 1883802 ID=cds.MS.gene62373.t1;Parent=MS.gene62373.t1
chr6.4 exon 1884476 1884583 1884476 ID=MS.gene62373.t1.exon2;Parent=MS.gene62373.t1
chr6.4 CDS 1884476 1884583 1884476 ID=cds.MS.gene62373.t1;Parent=MS.gene62373.t1
chr6.4 exon 1884629 1884805 1884629 ID=MS.gene62373.t1.exon3;Parent=MS.gene62373.t1
chr6.4 CDS 1884629 1884805 1884629 ID=cds.MS.gene62373.t1;Parent=MS.gene62373.t1
chr6.4 exon 1887761 1888017 1887761 ID=MS.gene62373.t1.exon4;Parent=MS.gene62373.t1
chr6.4 CDS 1887761 1888017 1887761 ID=cds.MS.gene62373.t1;Parent=MS.gene62373.t1
Gene Sequence

>MS.gene62373

ATGAGTTCATTAAACTTGAACAATGATGGTTATGGTTTGTCTTTGGACTTGAAAATTTCTCTTCCATCATCATCTTCTACTCGCCTTCAGGGTCATGTTGGTAACAATGGTTTTGAAAAGTTCAAAATACCCTTTGGGATTTCGAGTCATGGTGGAATCAATGAGTCTGAAAAGTCCAAAATACCCTTTGGGATTTCAAACCCTCTGGTGATCCAACCTAATGAGAGCATGGTCCAAAAAAATGGGGGGAGTTTTAGGAACACTAACCTTTCCAAAGCTCATTGGAAACCATCTGAAGATGATAAACTTAAACAACTTATCGCTGACCATGGTGCTAAAGATTGGAACAACATTGCTGAAAAACTACAAGGAAGATCAGGTCTGATCCTACACTACCTAACAAATTTTTATTTATCAAAATTTCAATAAGATTATTAATTTATTTTTTAACCAAATTGTTTTTTTTTAATATTGTTAATAATTTATATTGAATTTATTTATTTTTTACAAAAATAAATATTCAAAAAACTGAACATTTTCAAGCCGTACGCTTAGTATTTTCATTAAAATTGCATAAGTATTGTATTTTGATTATAAATTTCTTTAATTTCAATATTTGTTTGTAATTTAACATTTAGTTTAGTTTTTTTTTTTTGTGATAATGGTAATTGCAGGGAAAATTTGTATATTAAGGTGGCTTAATCAACTAGATCCTAGCATCAAAAGAGAACCTTTAAGTAAGGAAGAAGAGGAGATGCTTTTGCAGCTTCATACACTTCATGGTAACTAATGGGCACACATTTGCAAACATTTTCCTGGAAGGACAGACAATGCACTAAAGAATAATTTCCATGTGATCAAGGCTAGCAGGCAAAGGGAACTACTATCATCTATTGCAAGAAAGGAAAAGCTAACATATGAAATCCCAGCAAAATTTGCCATCACAAGCCCCATTGATGAATCCAATCTCAACCGCACTAGGCCTTTACCTAGTTCTCAAATGGGTATACTTTGAATCCTTTATTTTATCTTATCAAGCAATTTTAAATATTGGTGCGCGGCTAGAACAATTATTGCAATATCATATTTATTTATTTTTTTTTATGTCTTTGCATCTTTGATTGAAGCTGCATCGGCCTCATTTAACAACGATTCTCATTTAAACCTTTAAATTGCTTGAAAATTTTGTTACCTTCTCTCATGTCTTAGTTTATGTTAAATATCATATATTAATTTACTTGACATATGATATATATATATATATATATGGCTTAATTGCATGTTTGGTCCCTTATGTTTATTTTAGTTTTCAAGTTGGTCCCTTACGTTTTGAAAGTTTCAAGTTGGTCCCTTACGTTTTAAAAATTTTCAAGTTGGTCCCTTACGTTTTGAAAGTTTCAAGTTAGTCCCTTATGTTTATTTTAGTTTTCAAGTTGGTCCCTTATGTTTATTTTAGTTTTCAAGTCGGTCCAAAACATAAGGGACCAACTTGAAAACTAAAATAAACATATGGGACCAACTTGAAAACTAAAATAAACATAAGGGACCAACTTGAAAACTAAAAGAAACATAAGGGACTAACTTGAAACTTTCAAAACGTAAGGGACCAACTTGAAAACTAAAATAAACATAAGGGACCAACTTGAAACTTTCAAAACGTAAGGGACCAACTTGAAAACTAAAATAAACATAAGAGACCAAACATGCAATTAAGCCTATATATATATATATATATGGGGTTTGCTACAATAGACCCACCCTTTTTCATGAAGGTCTATTTTAGCAAGCTGCACCTTTTTCCTTAGACATAAATACCCATGATTTTGCTTTTTGAGAAAAAGAAAAGGAAGGGACAATTGTGTAATTCAGTCTTAATCATTAATGTTTTATTTTTGTTCTCTTCTCTCTTTCATTGTCTCTTTTACTGTTCCCTTGTTCTTCCTCCCGTTTTCCCATTCTCTCACTGTTGATTCTTAGGTAATAATGAATCAATCAATCATTGAAAAATGAAGAACCTTACACTCTTAATCTTGCTTCTTTGTTATAGGCACATACCTCTGTTTAGCTTCAAAGAATTTGGAAAAATGAAGTAGTTTTTGGATCTCTTCATTCATCCGTTAACAACAAAAACCATATTTAACTTGTGTGGATCCTGAAACTCATATTAAAAAATGCACAAAATTTCTTCTTTTTTATTCCTTTCTTATTGTTTCCCTTGTTTTTTTTTTACTTAAGACAGTTTGATTCTAAAAATTGGATCAGGGTCTGTTAAAGTTTCGAAATTTTTGTTATGGATTCAACTGGGTTTTAAGGAATATAGTTAATTTCTTCCGTGAATTTTGTTTCTGGCGATAGTGATTAATAAAAAATTACGAATGGCAGTTCATGAAACTGGCAACAAGAATAGAAAAAGGAACATGAACGAGGGAGAGAATGAAACAGAGGGAGAAGAAGAAAAAAGGCAATAAAAAACATTAATGATTTCAGTCAAAAGAAAAACAAAAACATTAATGATTAAAACAGAATTACACTATTGTCCCTTCCTTTTCTCTTTCTCAAAGAGCAAAATCATGGGTATTTATGTCTAAAGAAAAAGGTGCACTATGCTAAAATAGACCTTCATAAAAAATGGTGGGTCTATTGTAGCAAACCCCTATATGTATATGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGGGGGCTGTTAACTTGCACCCATCTAAAAACACTAAGGTGCAAGTTAACAAGCTGCACCTACTTGTACTTTACTAAAACACTATTTTGTCTCTATTAAACTTTATTTTAATTAAAAGGACATTTTTGTAAATAGCATAAATAATATTTGTTTATAATAGAAAAACATGGGTGTTTTGGTAAATAACTAGTAGGTGCTGCTTGTTAACTTGCACCTACTTGTACTTTACGAAAACATCATTTTGTCTCTATTAAACTTTATTTTAATTAATAGGACATTTTTGTAAATAGCATAAATAATATTTGTTTATAATAGAAAAACATGGGTGTTTTAGTAAATAACTAGTAGGTGCAGCTTATTAACTTGCACCTTAGTGTTTTTAGGTGGGTGCAAGTTAACAGCCTCCATATATGAGACAGGATCCGTTGACACCTGTGTCAACGGATTCGTTGACACCAAATCTCAACCGTACATTATATTTAATCAAAGGCTCACAATAGTTTCTAAATTAACTCAGTGTGTGCACCCTTTCTCTCAATCTCACACTATTATGGTTTTCAACCATTCAAAAACTCAGATTGCATACATGATGCATCATGATTTATTCTTGTTCACATCTCCATGTATTCTCTCTTGGTTAATTCCTCAAATTGAATTGCTGCCAATTCCTGGTGTACAAACAAAAAATCAAGAGTTATCTATCCCATCCCATATGGATTGCAATTTTCATGAGATCGATCCCAATTTGAGGAAGCTAGTGAAACTAGGGTAATTTAGATAAGTTTTTTTTACTACCGAAGGGATTTTTGGTATCGAAATTGAAACAAGTGAGAAAAAACATCATTTTGAGGAATCTGATTTTGAATTTTAGCATATGATTTGTTTCAATTGATCACATAGAAAACCATTTAATTAATAACATAGAAAACCCTTTAAATTAAATTAAGTAGAAACGTGATTTCATGGAACTTTGGTGTGTGTTGATGGCAGATGGAGTATAAAAACGAGTTGCAATCAGATGAGTTGCTGGGAAAAATCACACAAATTAATTTAGCAAATAATTACTAACCATTAGATTAAATAAAATAAACGGCTCAGATTTGGTGTCAACGAATCCATTGACACCTGGTGTCACCGGATCCTGACTATATATATATATATATATATATATATATATATATATGACCATATTGTTGATTTTTTTATTGTGTTATATTTTTAGGCTTACTTCAAAAAAGAATGGTAGAAGCTGAATTTGCCAAAGCTTGCAGTGCTATGAGAGAGCTTGACAATGTGTACCAGATGGAAAAGCTTAAGATTGCGGATCAATCCAATCTTTCAGATTCAAACTTAGAAGGTTCAACATCTGAGTCAGCTGCAACAAACATGAACAATGGATCAATTTTGGGGGATAGTGAAAATGTGGGAGATAAGATTAAGATGTCATTTTTTGACTTTCTTGGAGTAGGTGATACATAG
Protein sequence

>MS.gene62373.t1

MSSLNLNNDGYGLSLDLKISLPSSSSTRLQGHVGNNGFEKFKIPFGISSHGGINESEKSKIPFGISNPLVIQPNESMVQKNGGSFRNTNLSKAHWKPSEDDKLKQLIADHGAKDWNNIAEKLQGRSGKICILRWLNQLDPSIKREPLSKEEEEMLLQLHTLHDNALKNNFHVIKASRQRELLSSIARKEKLTYEIPAKFAITSPIDESNLNRTRPLPSSQMGLLQKRMVEAEFAKACSAMRELDNVYQMEKLKIADQSNLSDSNLEGSTSESAATNMNNGSILGDSENVGDKIKMSFFDFLGVGDT