Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62450.t1 | XP_003609272.1 | 83.1 | 237 | 25 | 2 | 1 | 229 | 1 | 230 | 2.00E-88 | 335.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62450.t1 | Q9LT81 | 42.4 | 139 | 44 | 3 | 31 | 137 | 81 | 215 | 1.9e-23 | 110.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62450.t1 | G7JVB3 | 83.1 | 237 | 25 | 2 | 1 | 229 | 1 | 230 | 1.4e-88 | 335.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene62450.t1 | TF | C3H |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62450.t1 | MTR_4g113940 | 72.963 | 270 | 33 | 2 | 1 | 230 | 1 | 270 | 1.63e-139 | 392 |
MS.gene62450.t1 | MTR_4g113890 | 84.810 | 237 | 21 | 2 | 1 | 229 | 1 | 230 | 5.34e-139 | 389 |
MS.gene62450.t1 | MTR_4g113860 | 45.130 | 308 | 90 | 7 | 1 | 230 | 1 | 307 | 2.74e-81 | 246 |
MS.gene62450.t1 | MTR_4g113970 | 45.344 | 247 | 54 | 6 | 1 | 167 | 1 | 246 | 2.18e-58 | 185 |
MS.gene62450.t1 | MTR_3g050390 | 41.250 | 240 | 75 | 8 | 31 | 230 | 15 | 228 | 1.03e-45 | 152 |
MS.gene62450.t1 | MTR_3g466460 | 61.176 | 85 | 10 | 2 | 169 | 230 | 10 | 94 | 1.26e-23 | 92.4 |
MS.gene62450.t1 | MTR_8g066730 | 36.364 | 110 | 44 | 1 | 54 | 137 | 91 | 200 | 1.42e-17 | 79.7 |
MS.gene62450.t1 | MTR_8g066730 | 36.364 | 110 | 44 | 1 | 54 | 137 | 91 | 200 | 1.88e-17 | 80.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62450.t1 | AT3G19360 | 34.228 | 298 | 93 | 8 | 31 | 230 | 81 | 373 | 1.77e-45 | 155 |
MS.gene62450.t1 | AT3G19360 | 34.228 | 298 | 93 | 8 | 31 | 230 | 81 | 373 | 1.77e-45 | 155 |
MS.gene62450.t1 | AT2G35430 | 33.166 | 199 | 91 | 9 | 55 | 230 | 71 | 250 | 1.85e-19 | 84.3 |
MS.gene62450.t1 | AT1G32360 | 33.913 | 115 | 45 | 2 | 54 | 137 | 90 | 204 | 3.01e-15 | 74.3 |
Find 61 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAACTAGCTTCTGCGAATT+TGG | 0.155359 | 8.2:+14453651 | None:intergenic |
ATGAAGATCCTGCACAATTT+AGG | 0.163729 | 8.2:-14453527 | MS.gene62450:CDS |
CCAAGTATACGTTTCTTCTT+AGG | 0.214369 | 8.2:+14452530 | None:intergenic |
TGAAGATCCTGCACAATTTA+GGG | 0.278155 | 8.2:-14453526 | MS.gene62450:CDS |
AGTCAGATCAATCGTATTTA+CGG | 0.310380 | 8.2:-14452497 | MS.gene62450:CDS |
GATACAGGATATTGTTCCTT+TGG | 0.336419 | 8.2:-14453465 | MS.gene62450:CDS |
TCAATCGTATTTACGGTGAT+TGG | 0.347052 | 8.2:-14452490 | MS.gene62450:CDS |
ATTTGTACTAAGTTCAGATT+TGG | 0.359410 | 8.2:-14453738 | MS.gene62450:CDS |
CACAATTTAGGGGCACTTAT+CGG | 0.370314 | 8.2:-14453515 | MS.gene62450:CDS |
AATTGCAGCTTCAGCTTCAA+TGG | 0.390999 | 8.2:+14452622 | None:intergenic |
AAATCAGAGTTACAAGTTCC+TGG | 0.400098 | 8.2:-14452650 | MS.gene62450:intron |
GACTTGCAGGGGAGGTGGTA+GGG | 0.419543 | 8.2:+14452579 | None:intergenic |
TGCAAGTCAACTTGTGGAAA+AGG | 0.437938 | 8.2:-14452564 | MS.gene62450:CDS |
CCTAAGAAGAAACGTATACT+TGG | 0.441257 | 8.2:-14452530 | MS.gene62450:CDS |
AGATTTGGTGCTTGTAGAAA+CGG | 0.444340 | 8.2:-14453723 | MS.gene62450:CDS |
CTGAGGCGGTGACATCTTAG+AGG | 0.449778 | 8.2:+14453890 | None:intergenic |
TTAGAGGTTGGAATATCATC+TGG | 0.452783 | 8.2:+14453906 | None:intergenic |
CACTTTGCTCATGGTGAAGA+AGG | 0.463092 | 8.2:-14453432 | MS.gene62450:intron |
TGTCTCAAGTGGAAGGATAC+AGG | 0.464303 | 8.2:-14453480 | MS.gene62450:CDS |
ACAAATTGCAACTTTGCTCA+TGG | 0.469357 | 8.2:-14453699 | MS.gene62450:CDS |
CTGATCTGTTTGATTGAGGA+AGG | 0.475163 | 8.2:+14453784 | None:intergenic |
CTCATGGGGCTGAAGAGATA+AGG | 0.488249 | 8.2:-14453683 | MS.gene62450:CDS |
TGTGCAAGAAGTATAGCAAT+GGG | 0.488339 | 8.2:-14453587 | MS.gene62450:CDS |
CAAATTGCAACTTTGCTCAT+GGG | 0.490368 | 8.2:-14453698 | MS.gene62450:CDS |
TGACTTGCAGGGGAGGTGGT+AGG | 0.490726 | 8.2:+14452578 | None:intergenic |
GATTGAGGAAGGGTCATCCT+TGG | 0.496966 | 8.2:+14453795 | None:intergenic |
AGCTTCTGCGAATTTGGAGG+TGG | 0.504943 | 8.2:+14453657 | None:intergenic |
CACAAGTTGACTTGCAGGGG+AGG | 0.509364 | 8.2:+14452571 | None:intergenic |
CCAAATTCGCAGAAGCTAGT+TGG | 0.511305 | 8.2:-14453651 | MS.gene62450:CDS |
ACTAGCTTCTGCGAATTTGG+AGG | 0.524749 | 8.2:+14453654 | None:intergenic |
GGAAGGGTCATCCTTGGAGG+AGG | 0.531078 | 8.2:+14453801 | None:intergenic |
GGCGGTGACATCTTAGAGGT+TGG | 0.533133 | 8.2:+14453894 | None:intergenic |
AATTTACACTTATCTGCATA+GGG | 0.538027 | 8.2:+14453555 | None:intergenic |
AACAATGACTTCAAAAGAGA+AGG | 0.542813 | 8.2:-14453852 | MS.gene62450:CDS |
CTCCCCTGCAAGTCAACTTG+TGG | 0.543090 | 8.2:-14452570 | MS.gene62450:CDS |
AAGTTGACTTGCAGGGGAGG+TGG | 0.548779 | 8.2:+14452574 | None:intergenic |
AAATTGCAACTTTGCTCATG+GGG | 0.550865 | 8.2:-14453697 | MS.gene62450:CDS |
AGGAGGGCATATCAATGCAT+TGG | 0.555491 | 8.2:+14453818 | None:intergenic |
TGAGGAAGGGTCATCCTTGG+AGG | 0.556539 | 8.2:+14453798 | None:intergenic |
CATTGATATGCCCTCCTCCA+AGG | 0.556864 | 8.2:-14453812 | MS.gene62450:CDS |
GAATTTACACTTATCTGCAT+AGG | 0.559420 | 8.2:+14453554 | None:intergenic |
TTTCCACAAGTTGACTTGCA+GGG | 0.560920 | 8.2:+14452567 | None:intergenic |
TAAGTGCCCCTAAATTGTGC+AGG | 0.568865 | 8.2:+14453519 | None:intergenic |
TGGTCTGATCTGTTTGATTG+AGG | 0.571695 | 8.2:+14453780 | None:intergenic |
CTGTGCAAGAAGTATAGCAA+TGG | 0.572239 | 8.2:-14453588 | MS.gene62450:CDS |
TCAGCTTCAATGGCTCCACC+AGG | 0.575223 | 8.2:+14452632 | None:intergenic |
CTAAGAAGAAACGTATACTT+GGG | 0.583825 | 8.2:-14452529 | MS.gene62450:CDS |
AAGAACTGTCACTTTGCTCA+TGG | 0.585017 | 8.2:-14453441 | MS.gene62450:CDS |
TTCCACAAGTTGACTTGCAG+GGG | 0.588906 | 8.2:+14452568 | None:intergenic |
AGACTAAGCTGTGTCTCAAG+TGG | 0.589149 | 8.2:-14453491 | MS.gene62450:CDS |
ATTGTGCAGGATCTTCATGA+AGG | 0.599081 | 8.2:+14453532 | None:intergenic |
TAAGCTGTGTCTCAAGTGGA+AGG | 0.609632 | 8.2:-14453487 | MS.gene62450:CDS |
AAAGTGACAGTTCTTTCCAA+AGG | 0.613225 | 8.2:+14453449 | None:intergenic |
TGATCTGTTTGATTGAGGAA+GGG | 0.618914 | 8.2:+14453785 | None:intergenic |
GAAGGGTCATCCTTGGAGGA+GGG | 0.622595 | 8.2:+14453802 | None:intergenic |
AATATCATCTGGAAAAGCCA+TGG | 0.624162 | 8.2:+14453917 | None:intergenic |
TTCAATGAAGAGAACTGAGG+CGG | 0.637828 | 8.2:+14453876 | None:intergenic |
GAAGATCCTGCACAATTTAG+GGG | 0.650410 | 8.2:-14453525 | MS.gene62450:CDS |
CAAGAAGTATAGCAATGGGG+AGG | 0.680526 | 8.2:-14453583 | MS.gene62450:CDS |
TCAGAGTTACAAGTTCCTGG+TGG | 0.718686 | 8.2:-14452647 | MS.gene62450:intron |
GTGCAAGAAGTATAGCAATG+GGG | 0.763140 | 8.2:-14453586 | MS.gene62450:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAAAAAAAGTTTTACATT+TGG | - | chr8.2:14453274-14453293 | MS.gene62450:intron | 10.0% |
!!! | GACAAATTTTTTTAAATATA+AGG | + | chr8.2:14453595-14453614 | None:intergenic | 10.0% |
!!! | TTTTTTTAAATATAAGGTCT+AGG | + | chr8.2:14453589-14453608 | None:intergenic | 15.0% |
!! | AACGATTAAATGATTTGAAT+GGG | - | chr8.2:14453128-14453147 | MS.gene62450:intron | 20.0% |
!!! | CAATAACTCATTTTGATTAT+TGG | - | chr8.2:14452987-14453006 | MS.gene62450:intron | 20.0% |
!!! | TACTATAATTTCTAGTAGTT+TGG | - | chr8.2:14453302-14453321 | MS.gene62450:intron | 20.0% |
!!! | TTATAACAATTGCAACTTTT+TGG | - | chr8.2:14453675-14453694 | MS.gene62450:CDS | 20.0% |
! | AATGGATGATTACTATTGTA+TGG | - | chr8.2:14453239-14453258 | MS.gene62450:intron | 25.0% |
! | AATTTACACTTATCTGCATA+GGG | + | chr8.2:14452841-14452860 | None:intergenic | 25.0% |
! | AGTAATCATCCATTAGAATA+AGG | + | chr8.2:14453233-14453252 | None:intergenic | 25.0% |
! | ATTTGTACTAAGTTCAGATT+TGG | - | chr8.2:14452655-14452674 | MS.gene62450:intron | 25.0% |
! | CAACGATTAAATGATTTGAA+TGG | - | chr8.2:14453127-14453146 | MS.gene62450:intron | 25.0% |
!! | ACTTTAAGAAGAAACAAGTT+TGG | + | chr8.2:14453377-14453396 | None:intergenic | 25.0% |
!! | TTAAAGTTTCTGCTGATTAT+TGG | - | chr8.2:14453390-14453409 | MS.gene62450:intron | 25.0% |
!! | TTCGTGTTTTGTAGAAAATA+TGG | + | chr8.2:14452636-14452655 | None:intergenic | 25.0% |
!!! | CTCATTTTGATTATTGGTTT+TGG | - | chr8.2:14452993-14453012 | MS.gene62450:intron | 25.0% |
AACAATGACTTCAAAAGAGA+AGG | - | chr8.2:14452541-14452560 | MS.gene62450:CDS | 30.0% | |
AAGAGTCAGAACAATATACA+TGG | + | chr8.2:14453704-14453723 | None:intergenic | 30.0% | |
AGTCAGATCAATCGTATTTA+CGG | - | chr8.2:14453896-14453915 | MS.gene62450:CDS | 30.0% | |
ATCATCCATTAGAATAAGGA+TGG | + | chr8.2:14453229-14453248 | None:intergenic | 30.0% | |
CCTCAAAATTATTGATGAGT+CGG | + | chr8.2:14453431-14453450 | None:intergenic | 30.0% | |
CTAAGAAGAAACGTATACTT+GGG | - | chr8.2:14453864-14453883 | MS.gene62450:CDS | 30.0% | |
GAATTTACACTTATCTGCAT+AGG | + | chr8.2:14452842-14452861 | None:intergenic | 30.0% | |
GATGAACATAATACAATAGC+TGG | + | chr8.2:14453350-14453369 | None:intergenic | 30.0% | |
TGATTCCATCCTTATTCTAA+TGG | - | chr8.2:14453221-14453240 | MS.gene62450:intron | 30.0% | |
!! | TTTTTCAATGAAGAGAACTG+AGG | + | chr8.2:14452523-14452542 | None:intergenic | 30.0% |
!!! | AGGGTTTGTTGAATTTTCTA+TGG | + | chr8.2:14453798-14453817 | None:intergenic | 30.0% |
AAAGTGACAGTTCTTTCCAA+AGG | + | chr8.2:14452947-14452966 | None:intergenic | 35.0% | |
AAATCAGAGTTACAAGTTCC+TGG | - | chr8.2:14453743-14453762 | MS.gene62450:CDS | 35.0% | |
AAATTGCAACTTTGCTCATG+GGG | - | chr8.2:14452696-14452715 | MS.gene62450:intron | 35.0% | |
ACAAATTGCAACTTTGCTCA+TGG | - | chr8.2:14452694-14452713 | MS.gene62450:intron | 35.0% | |
ATCATACACTTGCACACAAA+TGG | + | chr8.2:14453617-14453636 | None:intergenic | 35.0% | |
ATGAAGATCCTGCACAATTT+AGG | - | chr8.2:14452866-14452885 | MS.gene62450:intron | 35.0% | |
CAAATTGCAACTTTGCTCAT+GGG | - | chr8.2:14452695-14452714 | MS.gene62450:intron | 35.0% | |
CCAAGTATACGTTTCTTCTT+AGG | + | chr8.2:14453866-14453885 | None:intergenic | 35.0% | |
CCTAAGAAGAAACGTATACT+TGG | - | chr8.2:14453863-14453882 | MS.gene62450:CDS | 35.0% | |
GATACAGGATATTGTTCCTT+TGG | - | chr8.2:14452928-14452947 | MS.gene62450:intron | 35.0% | |
TCAATCGTATTTACGGTGAT+TGG | - | chr8.2:14453903-14453922 | MS.gene62450:CDS | 35.0% | |
TGAAGATCCTGCACAATTTA+GGG | - | chr8.2:14452867-14452886 | MS.gene62450:intron | 35.0% | |
TGATCTGTTTGATTGAGGAA+GGG | + | chr8.2:14452611-14452630 | None:intergenic | 35.0% | |
TGTCTTCATCATCACAAATG+CGG | + | chr8.2:14453532-14453551 | None:intergenic | 35.0% | |
TGTTCTGACTCTTGAAGTAT+TGG | - | chr8.2:14453711-14453730 | MS.gene62450:CDS | 35.0% | |
TTAGAGGTTGGAATATCATC+TGG | + | chr8.2:14452490-14452509 | None:intergenic | 35.0% | |
! | CCGACTCATCAATAATTTTG+AGG | - | chr8.2:14453428-14453447 | MS.gene62450:intron | 35.0% |
! | TGTGCAAGAAGTATAGCAAT+GGG | - | chr8.2:14452806-14452825 | MS.gene62450:intron | 35.0% |
!! | AGATTTGGTGCTTGTAGAAA+CGG | - | chr8.2:14452670-14452689 | MS.gene62450:intron | 35.0% |
!! | TTGACAAAGCAAGTTCTGAA+TGG | - | chr8.2:14453194-14453213 | MS.gene62450:intron | 35.0% |
!!! | TTTGAATGGGTGTCATTTTG+TGG | - | chr8.2:14453141-14453160 | MS.gene62450:intron | 35.0% |
AATTGCAGCTTCAGCTTCAA+TGG | + | chr8.2:14453774-14453793 | None:intergenic | 40.0% | |
ATTGTGCAGGATCTTCATGA+AGG | + | chr8.2:14452864-14452883 | None:intergenic | 40.0% | |
CTGATCTGTTTGATTGAGGA+AGG | + | chr8.2:14452612-14452631 | None:intergenic | 40.0% | |
CTTAATACCGCGGTCAAATA+AGG | - | chr8.2:14453497-14453516 | MS.gene62450:CDS | 40.0% | |
CTTATTTGACCGCGGTATTA+AGG | + | chr8.2:14453499-14453518 | None:intergenic | 40.0% | |
GAAGATCCTGCACAATTTAG+GGG | - | chr8.2:14452868-14452887 | MS.gene62450:intron | 40.0% | |
TGCAAGTCAACTTGTGGAAA+AGG | - | chr8.2:14453829-14453848 | MS.gene62450:CDS | 40.0% | |
TGGTCTGATCTGTTTGATTG+AGG | + | chr8.2:14452616-14452635 | None:intergenic | 40.0% | |
TTCAATGAAGAGAACTGAGG+CGG | + | chr8.2:14452520-14452539 | None:intergenic | 40.0% | |
! | CTGTGCAAGAAGTATAGCAA+TGG | - | chr8.2:14452805-14452824 | MS.gene62450:intron | 40.0% |
! | GCATTAACCTTATTTGACCG+CGG | + | chr8.2:14453507-14453526 | None:intergenic | 40.0% |
! | GTGCAAGAAGTATAGCAATG+GGG | - | chr8.2:14452807-14452826 | MS.gene62450:intron | 40.0% |
!! | AAGAACTGTCACTTTGCTCA+TGG | - | chr8.2:14452952-14452971 | MS.gene62450:intron | 40.0% |
!! | CACAATTTAGGGGCACTTAT+CGG | - | chr8.2:14452878-14452897 | MS.gene62450:intron | 40.0% |
!! | TTTCCACAAGTTGACTTGCA+GGG | + | chr8.2:14453829-14453848 | None:intergenic | 40.0% |
!!! | TTTTCCACAAGTTGACTTGC+AGG | + | chr8.2:14453830-14453849 | None:intergenic | 40.0% |
AGACTAAGCTGTGTCTCAAG+TGG | - | chr8.2:14452902-14452921 | MS.gene62450:intron | 45.0% | |
CACTTTGCTCATGGTGAAGA+AGG | - | chr8.2:14452961-14452980 | MS.gene62450:intron | 45.0% | |
CCAAATTCGCAGAAGCTAGT+TGG | - | chr8.2:14452742-14452761 | MS.gene62450:intron | 45.0% | |
TAAGCTGTGTCTCAAGTGGA+AGG | - | chr8.2:14452906-14452925 | MS.gene62450:intron | 45.0% | |
TAAGTGCCCCTAAATTGTGC+AGG | + | chr8.2:14452877-14452896 | None:intergenic | 45.0% | |
TCAGAGTTACAAGTTCCTGG+TGG | - | chr8.2:14453746-14453765 | MS.gene62450:CDS | 45.0% | |
TGTCTCAAGTGGAAGGATAC+AGG | - | chr8.2:14452913-14452932 | MS.gene62450:intron | 45.0% | |
! | ACTAGCTTCTGCGAATTTGG+AGG | + | chr8.2:14452742-14452761 | None:intergenic | 45.0% |
! | AGGAGGGCATATCAATGCAT+TGG | + | chr8.2:14452578-14452597 | None:intergenic | 45.0% |
! | CAAGAAGTATAGCAATGGGG+AGG | - | chr8.2:14452810-14452829 | MS.gene62450:intron | 45.0% |
! | CCAACTAGCTTCTGCGAATT+TGG | + | chr8.2:14452745-14452764 | None:intergenic | 45.0% |
!! | TTCCACAAGTTGACTTGCAG+GGG | + | chr8.2:14453828-14453847 | None:intergenic | 45.0% |
AGCTTCTGCGAATTTGGAGG+TGG | + | chr8.2:14452739-14452758 | None:intergenic | 50.0% | |
CATTGATATGCCCTCCTCCA+AGG | - | chr8.2:14452581-14452600 | MS.gene62450:CDS | 50.0% | |
CGGTATTAAGGATCGTGGCA+TGG | + | chr8.2:14453487-14453506 | None:intergenic | 50.0% | |
CTCATGGGGCTGAAGAGATA+AGG | - | chr8.2:14452710-14452729 | MS.gene62450:intron | 50.0% | |
GATTGAGGAAGGGTCATCCT+TGG | + | chr8.2:14452601-14452620 | None:intergenic | 50.0% | |
TGCCACGATCCTTAATACCG+CGG | - | chr8.2:14453487-14453506 | MS.gene62450:CDS | 50.0% | |
CTCCCCTGCAAGTCAACTTG+TGG | - | chr8.2:14453823-14453842 | MS.gene62450:CDS | 55.0% | |
CTGAGGCGGTGACATCTTAG+AGG | + | chr8.2:14452506-14452525 | None:intergenic | 55.0% | |
GAAGGGTCATCCTTGGAGGA+GGG | + | chr8.2:14452594-14452613 | None:intergenic | 55.0% | |
GACCGCGGTATTAAGGATCG+TGG | + | chr8.2:14453492-14453511 | None:intergenic | 55.0% | |
GGCGGTGACATCTTAGAGGT+TGG | + | chr8.2:14452502-14452521 | None:intergenic | 55.0% | |
TCAGCTTCAATGGCTCCACC+AGG | + | chr8.2:14453764-14453783 | None:intergenic | 55.0% | |
TGAGGAAGGGTCATCCTTGG+AGG | + | chr8.2:14452598-14452617 | None:intergenic | 55.0% | |
! | AAGGTCTAGGACCACGACTG+TGG | + | chr8.2:14453576-14453595 | None:intergenic | 55.0% |
!! | AAGTTGACTTGCAGGGGAGG+TGG | + | chr8.2:14453822-14453841 | None:intergenic | 55.0% |
!! | CACAAGTTGACTTGCAGGGG+AGG | + | chr8.2:14453825-14453844 | None:intergenic | 55.0% |
GACTTGCAGGGGAGGTGGTA+GGG | + | chr8.2:14453817-14453836 | None:intergenic | 60.0% | |
GGAAGGGTCATCCTTGGAGG+AGG | + | chr8.2:14452595-14452614 | None:intergenic | 60.0% | |
GTACGTCTCAGCCACAGTCG+TGG | - | chr8.2:14453562-14453581 | MS.gene62450:CDS | 60.0% | |
! | TGACTTGCAGGGGAGGTGGT+AGG | + | chr8.2:14453818-14453837 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 14452478 | 14453937 | 14452478 | ID=MS.gene62450 |
chr8.2 | mRNA | 14452478 | 14453937 | 14452478 | ID=MS.gene62450.t1;Parent=MS.gene62450 |
chr8.2 | exon | 14453433 | 14453937 | 14453433 | ID=MS.gene62450.t1.exon1;Parent=MS.gene62450.t1 |
chr8.2 | CDS | 14453433 | 14453937 | 14453433 | ID=cds.MS.gene62450.t1;Parent=MS.gene62450.t1 |
chr8.2 | exon | 14452478 | 14452665 | 14452478 | ID=MS.gene62450.t1.exon2;Parent=MS.gene62450.t1 |
chr8.2 | CDS | 14452478 | 14452665 | 14452478 | ID=cds.MS.gene62450.t1;Parent=MS.gene62450.t1 |
Gene Sequence |
Protein sequence |