Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62549.t1 | XP_024632961.1 | 84.8 | 800 | 94 | 4 | 1 | 772 | 1 | 800 | 0.00E+00 | 1353.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62549.t1 | Q9SZL8 | 26.9 | 636 | 395 | 11 | 32 | 665 | 70 | 637 | 8.2e-63 | 243.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62549.t1 | D3YBB9 | 76.9 | 774 | 159 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1192.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene62549.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62549.t1 | MTR_0558s0020 | 87.500 | 296 | 36 | 1 | 1 | 295 | 1 | 296 | 0.0 | 547 |
MS.gene62549.t1 | MTR_1g083640 | 83.451 | 284 | 31 | 1 | 1 | 268 | 1 | 284 | 6.47e-173 | 498 |
MS.gene62549.t1 | MTR_8g446020 | 73.559 | 295 | 39 | 1 | 1 | 295 | 1 | 256 | 3.40e-151 | 442 |
MS.gene62549.t1 | MTR_2g014100 | 82.449 | 245 | 34 | 1 | 1 | 236 | 1 | 245 | 4.82e-142 | 418 |
MS.gene62549.t1 | MTR_6g090505 | 83.544 | 237 | 39 | 0 | 65 | 301 | 1 | 237 | 1.04e-141 | 421 |
MS.gene62549.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 396 | 495 | 230 | 306 | 3.46e-34 | 135 |
MS.gene62549.t1 | MTR_6g090505 | 75.510 | 49 | 12 | 0 | 567 | 615 | 314 | 362 | 8.79e-11 | 64.7 |
MS.gene62549.t1 | MTR_0337s0040 | 72.031 | 261 | 33 | 2 | 1 | 260 | 1 | 222 | 3.90e-124 | 371 |
MS.gene62549.t1 | MTR_3g008240 | 84.729 | 203 | 30 | 1 | 1 | 202 | 1 | 203 | 1.67e-118 | 355 |
MS.gene62549.t1 | MTR_4g040430 | 84.158 | 202 | 28 | 1 | 1 | 202 | 1 | 198 | 4.86e-118 | 354 |
MS.gene62549.t1 | MTR_0337s0060 | 58.861 | 316 | 30 | 4 | 447 | 759 | 21 | 239 | 1.34e-108 | 331 |
MS.gene62549.t1 | MTR_5g071590 | 73.889 | 180 | 34 | 2 | 1 | 167 | 1 | 180 | 6.09e-90 | 281 |
MS.gene62549.t1 | MTR_1g055240 | 88.028 | 142 | 17 | 0 | 91 | 232 | 3 | 144 | 7.22e-87 | 271 |
MS.gene62549.t1 | MTR_0019s0290 | 82.237 | 152 | 27 | 0 | 82 | 233 | 9 | 160 | 5.86e-86 | 269 |
MS.gene62549.t1 | MTR_3g028680 | 81.013 | 158 | 27 | 1 | 618 | 772 | 1 | 158 | 5.82e-84 | 265 |
MS.gene62549.t1 | MTR_2g067090 | 78.065 | 155 | 31 | 1 | 621 | 772 | 99 | 253 | 1.84e-75 | 246 |
MS.gene62549.t1 | MTR_4g133495 | 62.088 | 182 | 43 | 2 | 576 | 754 | 88 | 246 | 3.73e-66 | 221 |
MS.gene62549.t1 | MTR_4g133340 | 62.088 | 182 | 43 | 2 | 576 | 754 | 88 | 246 | 3.73e-66 | 221 |
MS.gene62549.t1 | MTR_1281s0010 | 81.651 | 109 | 20 | 0 | 19 | 127 | 1 | 109 | 5.48e-57 | 190 |
MS.gene62549.t1 | MTR_6g051425 | 32.075 | 318 | 185 | 6 | 40 | 341 | 22 | 324 | 8.41e-39 | 147 |
MS.gene62549.t1 | MTR_4g008820 | 83.750 | 80 | 12 | 1 | 1 | 79 | 125 | 204 | 1.63e-31 | 131 |
MS.gene62549.t1 | MTR_8g046060 | 77.273 | 88 | 11 | 2 | 1 | 79 | 91 | 178 | 3.36e-31 | 122 |
MS.gene62549.t1 | MTR_2g067130 | 62.963 | 81 | 24 | 2 | 695 | 772 | 46 | 123 | 4.75e-22 | 94.0 |
MS.gene62549.t1 | MTR_1g070355 | 26.852 | 324 | 216 | 6 | 41 | 362 | 80 | 384 | 1.74e-19 | 93.6 |
MS.gene62549.t1 | MTR_0402s0040 | 25.405 | 185 | 119 | 4 | 49 | 233 | 40 | 205 | 1.95e-14 | 77.0 |
MS.gene62549.t1 | MTR_0337s0050 | 72.222 | 36 | 10 | 0 | 259 | 294 | 14 | 49 | 2.43e-12 | 63.5 |
MS.gene62549.t1 | MTR_4g035820 | 22.069 | 290 | 193 | 7 | 17 | 299 | 61 | 324 | 1.04e-11 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62549.t1 | AT4G38180 | 27.613 | 641 | 384 | 13 | 32 | 665 | 70 | 637 | 1.96e-69 | 244 |
MS.gene62549.t1 | AT4G15090 | 24.856 | 696 | 436 | 15 | 50 | 741 | 66 | 678 | 2.96e-58 | 213 |
MS.gene62549.t1 | AT4G15090 | 24.856 | 696 | 436 | 15 | 50 | 741 | 66 | 678 | 2.96e-58 | 213 |
MS.gene62549.t1 | AT4G15090 | 24.856 | 696 | 436 | 15 | 50 | 741 | 66 | 678 | 2.96e-58 | 213 |
MS.gene62549.t1 | AT4G15090 | 24.856 | 696 | 436 | 15 | 50 | 741 | 66 | 678 | 2.96e-58 | 213 |
MS.gene62549.t1 | AT4G15090 | 24.856 | 696 | 436 | 15 | 50 | 741 | 66 | 678 | 2.96e-58 | 213 |
MS.gene62549.t1 | AT2G27110 | 24.930 | 714 | 424 | 19 | 10 | 719 | 29 | 634 | 1.52e-52 | 197 |
MS.gene62549.t1 | AT2G27110 | 24.930 | 714 | 424 | 19 | 10 | 719 | 29 | 634 | 1.52e-52 | 197 |
MS.gene62549.t1 | AT2G27110 | 27.112 | 509 | 314 | 11 | 213 | 719 | 36 | 489 | 6.36e-52 | 193 |
MS.gene62549.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 8.00e-51 | 191 |
MS.gene62549.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 8.00e-51 | 191 |
MS.gene62549.t1 | AT3G06250 | 24.961 | 633 | 352 | 16 | 34 | 661 | 189 | 703 | 8.00e-51 | 191 |
MS.gene62549.t1 | AT1G76320 | 24.668 | 677 | 414 | 19 | 50 | 720 | 12 | 598 | 4.44e-49 | 184 |
MS.gene62549.t1 | AT1G76320 | 24.704 | 676 | 413 | 19 | 50 | 719 | 12 | 597 | 1.84e-48 | 183 |
MS.gene62549.t1 | AT1G76320 | 24.704 | 676 | 413 | 19 | 50 | 719 | 12 | 597 | 1.91e-48 | 183 |
MS.gene62549.t1 | AT1G76320 | 24.704 | 676 | 413 | 19 | 50 | 719 | 12 | 597 | 1.91e-48 | 183 |
MS.gene62549.t1 | AT3G22170 | 22.329 | 730 | 450 | 17 | 34 | 753 | 69 | 691 | 1.46e-46 | 179 |
MS.gene62549.t1 | AT3G22170 | 22.329 | 730 | 450 | 17 | 34 | 753 | 69 | 691 | 1.46e-46 | 179 |
MS.gene62549.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 2.85e-45 | 174 |
MS.gene62549.t1 | AT5G18960 | 24.575 | 647 | 360 | 18 | 24 | 661 | 200 | 727 | 2.85e-45 | 174 |
MS.gene62549.t1 | AT4G38170 | 24.324 | 481 | 296 | 13 | 235 | 703 | 24 | 448 | 1.00e-42 | 164 |
MS.gene62549.t1 | AT5G28530 | 24.100 | 639 | 388 | 17 | 40 | 660 | 60 | 619 | 4.80e-42 | 164 |
MS.gene62549.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 3.88e-41 | 161 |
MS.gene62549.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 3.88e-41 | 161 |
MS.gene62549.t1 | AT1G10240 | 24.559 | 623 | 378 | 19 | 49 | 659 | 62 | 604 | 7.00e-41 | 160 |
MS.gene62549.t1 | AT1G10240 | 24.559 | 623 | 378 | 19 | 49 | 659 | 62 | 604 | 7.00e-41 | 160 |
MS.gene62549.t1 | AT2G32250 | 23.624 | 745 | 432 | 21 | 4 | 743 | 10 | 622 | 1.49e-38 | 154 |
MS.gene62549.t1 | AT2G32250 | 23.490 | 745 | 433 | 20 | 4 | 743 | 10 | 622 | 1.96e-38 | 154 |
MS.gene62549.t1 | AT2G32250 | 23.490 | 745 | 433 | 20 | 4 | 743 | 10 | 622 | 1.96e-38 | 154 |
MS.gene62549.t1 | AT2G32250 | 23.490 | 745 | 433 | 20 | 4 | 743 | 10 | 622 | 1.96e-38 | 154 |
MS.gene62549.t1 | AT2G32250 | 23.490 | 745 | 433 | 20 | 4 | 743 | 10 | 622 | 1.98e-38 | 154 |
MS.gene62549.t1 | AT2G32250 | 23.490 | 745 | 433 | 20 | 4 | 743 | 10 | 622 | 1.98e-38 | 154 |
MS.gene62549.t1 | AT2G32250 | 23.446 | 708 | 408 | 18 | 41 | 743 | 3 | 581 | 9.36e-38 | 151 |
MS.gene62549.t1 | AT2G32250 | 23.446 | 708 | 408 | 18 | 41 | 743 | 3 | 581 | 1.05e-37 | 151 |
MS.gene62549.t1 | AT1G80010 | 23.602 | 644 | 387 | 23 | 41 | 662 | 101 | 661 | 4.27e-35 | 143 |
MS.gene62549.t1 | AT1G52520 | 21.920 | 625 | 408 | 16 | 41 | 662 | 91 | 638 | 2.59e-32 | 134 |
MS.gene62549.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 106 | 369 | 3.35e-26 | 115 |
MS.gene62549.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 2.12e-12 | 71.2 |
MS.gene62549.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 177 | 440 | 3.89e-26 | 115 |
MS.gene62549.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 2.38e-12 | 71.2 |
MS.gene62549.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 163 | 426 | 4.10e-26 | 115 |
MS.gene62549.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.37e-12 | 71.2 |
MS.gene62549.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 163 | 426 | 4.26e-26 | 115 |
MS.gene62549.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.37e-12 | 71.2 |
MS.gene62549.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 163 | 426 | 4.26e-26 | 115 |
MS.gene62549.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.37e-12 | 71.2 |
MS.gene62549.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 163 | 426 | 5.80e-26 | 114 |
MS.gene62549.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.28e-12 | 71.2 |
MS.gene62549.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 163 | 426 | 5.80e-26 | 114 |
MS.gene62549.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.28e-12 | 71.2 |
MS.gene62549.t1 | AT5G28530 | 21.781 | 629 | 352 | 20 | 40 | 660 | 60 | 556 | 9.26e-23 | 103 |
MS.gene62549.t1 | AT5G28530 | 21.622 | 629 | 349 | 21 | 40 | 660 | 60 | 552 | 4.97e-22 | 101 |
Find 116 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 7.3:-69431757 | MS.gene62549:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 7.3:-69432066 | MS.gene62549:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 7.3:+69430931 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 7.3:-69431799 | MS.gene62549:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 7.3:-69432850 | MS.gene62549:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 7.3:-69432347 | MS.gene62549:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 7.3:-69432314 | MS.gene62549:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 7.3:+69432220 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 7.3:+69430937 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 7.3:-69432025 | MS.gene62549:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 7.3:-69431085 | MS.gene62549:CDS |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 7.3:+69432202 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 7.3:-69431502 | MS.gene62549:CDS |
TCCGATATTTATTGTTTGTT+CGG | 0.355160 | 7.3:+69432800 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 7.3:-69431925 | MS.gene62549:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 7.3:-69431093 | MS.gene62549:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 7.3:-69432801 | MS.gene62549:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 7.3:-69431926 | MS.gene62549:CDS |
AACAATAAATATCGGACATT+AGG | 0.393512 | 7.3:-69432793 | MS.gene62549:intron |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 7.3:+69431209 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 7.3:+69433330 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 7.3:-69430945 | MS.gene62549:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 7.3:+69430955 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 7.3:-69431625 | MS.gene62549:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 7.3:-69431060 | MS.gene62549:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 7.3:-69433559 | MS.gene62549:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 7.3:-69431377 | MS.gene62549:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 7.3:+69431454 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 7.3:-69433488 | MS.gene62549:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 7.3:+69431453 | None:intergenic |
AGCTGGAATATATTTAAAGT+TGG | 0.426315 | 7.3:-69433271 | MS.gene62549:CDS |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 7.3:-69433153 | MS.gene62549:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 7.3:+69432209 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 7.3:-69433288 | MS.gene62549:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 7.3:+69431276 | None:intergenic |
CGTTATGTTTGTAACAAAGA+AGG | 0.449439 | 7.3:-69433405 | MS.gene62549:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 7.3:-69433123 | MS.gene62549:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 7.3:-69433634 | MS.gene62549:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 7.3:-69432135 | MS.gene62549:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 7.3:-69431971 | MS.gene62549:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 7.3:-69431376 | MS.gene62549:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 7.3:-69433439 | MS.gene62549:CDS |
GGGTTGTCACAGTCGACATT+GGG | 0.480993 | 7.3:-69431419 | MS.gene62549:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 7.3:-69433078 | MS.gene62549:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 7.3:+69431623 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 7.3:+69433294 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 7.3:-69433501 | MS.gene62549:CDS |
CTGTCTGTGAACCATCTGTT+GGG | 0.487793 | 7.3:-69430984 | MS.gene62549:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 7.3:-69433010 | MS.gene62549:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 7.3:+69433183 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 7.3:-69433445 | MS.gene62549:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 7.3:-69431609 | MS.gene62549:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 7.3:+69432334 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 7.3:-69432024 | MS.gene62549:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 7.3:-69432997 | MS.gene62549:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 7.3:-69431785 | MS.gene62549:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 7.3:+69431705 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 7.3:-69433091 | MS.gene62549:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 7.3:+69432905 | None:intergenic |
GCTGTCTGTGAACCATCTGT+TGG | 0.504047 | 7.3:-69430985 | MS.gene62549:CDS |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 7.3:+69433195 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 7.3:-69431938 | MS.gene62549:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 7.3:-69431440 | MS.gene62549:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 7.3:+69433039 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 7.3:-69431766 | MS.gene62549:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 7.3:-69431920 | MS.gene62549:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 7.3:-69433235 | MS.gene62549:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 7.3:+69431460 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 7.3:+69431817 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 7.3:-69433394 | MS.gene62549:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 7.3:-69431439 | MS.gene62549:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 7.3:+69431628 | None:intergenic |
AGGGTTGTCACAGTCGACAT+TGG | 0.538587 | 7.3:-69431420 | MS.gene62549:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 7.3:+69431822 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 7.3:-69431608 | MS.gene62549:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 7.3:-69433393 | MS.gene62549:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 7.3:-69433569 | MS.gene62549:CDS |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 7.3:+69432189 | None:intergenic |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 7.3:-69431219 | MS.gene62549:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 7.3:-69432943 | MS.gene62549:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 7.3:-69433610 | MS.gene62549:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 7.3:-69433075 | MS.gene62549:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 7.3:-69431133 | MS.gene62549:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 7.3:-69433236 | MS.gene62549:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 7.3:+69431704 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 7.3:+69430973 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 7.3:+69431683 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 7.3:-69433645 | MS.gene62549:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 7.3:-69433084 | MS.gene62549:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 7.3:-69431092 | MS.gene62549:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 7.3:-69432203 | MS.gene62549:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 7.3:-69431097 | MS.gene62549:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 7.3:-69431470 | MS.gene62549:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 7.3:+69431017 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 7.3:-69433004 | MS.gene62549:CDS |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 7.3:-69433090 | MS.gene62549:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 7.3:-69433001 | MS.gene62549:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 7.3:-69431130 | MS.gene62549:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 7.3:-69431707 | MS.gene62549:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 7.3:-69431622 | MS.gene62549:CDS |
TTGATATCGTTGCGCTTCAG+TGG | 0.611060 | 7.3:+69431185 | None:intergenic |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 7.3:+69433345 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 7.3:+69431969 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 7.3:-69433070 | MS.gene62549:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 7.3:+69431455 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 7.3:-69432134 | MS.gene62549:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 7.3:+69431212 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 7.3:-69431784 | MS.gene62549:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 7.3:+69431234 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 7.3:+69431663 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 7.3:-69431108 | MS.gene62549:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 7.3:+69431358 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.671057 | 7.3:-69432207 | MS.gene62549:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 7.3:-69431375 | MS.gene62549:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 7.3:-69431524 | MS.gene62549:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 7.3:-69431523 | MS.gene62549:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACCATAATTATAGTTTAA+TGG | + | chr7.3:69433418-69433437 | None:intergenic | 15.0% |
!! | AAACCATTAAACTATAATTA+TGG | - | chr7.3:69433412-69433431 | MS.gene62549:CDS | 15.0% |
!!! | TGTTTTTTATGTTATAAGTT+AGG | - | chr7.3:69433206-69433225 | MS.gene62549:CDS | 15.0% |
!! | ATGTCTATAAGATATATAAG+TGG | - | chr7.3:69430775-69430794 | MS.gene62549:intron | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | - | chr7.3:69430566-69430585 | MS.gene62549:intron | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | - | chr7.3:69430776-69430795 | MS.gene62549:intron | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | - | chr7.3:69430510-69430529 | MS.gene62549:intron | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | - | chr7.3:69431393-69431412 | MS.gene62549:CDS | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr7.3:69432015-69432034 | MS.gene62549:CDS | 20.0% |
!!! | CTATACATTTTCACATTTTT+TGG | - | chr7.3:69433349-69433368 | MS.gene62549:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | - | chr7.3:69431365-69431384 | MS.gene62549:CDS | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | + | chr7.3:69431853-69431872 | None:intergenic | 25.0% |
! | AACAATAAATATCGGACATT+AGG | - | chr7.3:69431218-69431237 | MS.gene62549:CDS | 25.0% |
! | AATTCTTGATTGTTATGCAT+TGG | - | chr7.3:69433304-69433323 | MS.gene62549:CDS | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | - | chr7.3:69430572-69430591 | MS.gene62549:intron | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | - | chr7.3:69431210-69431229 | MS.gene62549:CDS | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | + | chr7.3:69432386-69432405 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | - | chr7.3:69430442-69430461 | MS.gene62549:intron | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr7.3:69432212-69432231 | MS.gene62549:CDS | 25.0% |
! | TCCGATATTTATTGTTTGTT+CGG | + | chr7.3:69431214-69431233 | None:intergenic | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | - | chr7.3:69430401-69430420 | MS.gene62549:intron | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | - | chr7.3:69431283-69431302 | MS.gene62549:CDS | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | + | chr7.3:69432351-69432370 | None:intergenic | 25.0% |
! | TGATGCTTTAACTAAAAAAG+CGG | - | chr7.3:69433237-69433256 | MS.gene62549:CDS | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | - | chr7.3:69432386-69432405 | MS.gene62549:intron | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | - | chr7.3:69431945-69431964 | MS.gene62549:CDS | 25.0% |
!! | AGCTGGAATATATTTAAAGT+TGG | - | chr7.3:69430740-69430759 | MS.gene62549:intron | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | - | chr7.3:69431385-69431404 | MS.gene62549:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | - | chr7.3:69431641-69431660 | MS.gene62549:CDS | 25.0% |
!! | TTGGTTTGAATATTATCTTC+TGG | - | chr7.3:69433323-69433342 | MS.gene62549:CDS | 25.0% |
!! | TTTTCAATTACTGAGTTAAG+TGG | - | chr7.3:69433446-69433465 | MS.gene62549:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | - | chr7.3:69432487-69432506 | MS.gene62549:intron | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr7.3:69430562-69430581 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | - | chr7.3:69431392-69431411 | MS.gene62549:CDS | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr7.3:69430888-69430907 | MS.gene62549:intron | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr7.3:69432019-69432038 | MS.gene62549:CDS | 25.0% |
!!! | TGGTTTTAACGCATTTAATT+TGG | - | chr7.3:69433369-69433388 | MS.gene62549:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | - | chr7.3:69432488-69432507 | MS.gene62549:intron | 25.0% |
AAACACATATGATCTTTCCA+TGG | + | chr7.3:69431456-69431475 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | - | chr7.3:69430618-69430637 | MS.gene62549:intron | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | - | chr7.3:69433066-69433085 | MS.gene62549:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | - | chr7.3:69431986-69432005 | MS.gene62549:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | - | chr7.3:69430921-69430940 | MS.gene62549:intron | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | - | chr7.3:69430366-69430385 | MS.gene62549:intron | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | - | chr7.3:69431987-69432006 | MS.gene62549:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | + | chr7.3:69431680-69431699 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | + | chr7.3:69432559-69432578 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | - | chr7.3:69431161-69431180 | MS.gene62549:CDS | 30.0% | |
CGTTATGTTTGTAACAAAGA+AGG | - | chr7.3:69430606-69430625 | MS.gene62549:intron | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | + | chr7.3:69432391-69432410 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | - | chr7.3:69431322-69431341 | MS.gene62549:CDS | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | - | chr7.3:69432389-69432408 | MS.gene62549:intron | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | - | chr7.3:69431901-69431920 | MS.gene62549:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | + | chr7.3:69432560-69432579 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | - | chr7.3:69430707-69430726 | MS.gene62549:intron | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | - | chr7.3:69430452-69430471 | MS.gene62549:intron | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | + | chr7.3:69432197-69432216 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | - | chr7.3:69430617-69430636 | MS.gene62549:intron | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | + | chr7.3:69431089-69431108 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | + | chr7.3:69432331-69432350 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | + | chr7.3:69433077-69433096 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | + | chr7.3:69430975-69430994 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | - | chr7.3:69431600-69431619 | MS.gene62549:CDS | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | + | chr7.3:69430819-69430838 | None:intergenic | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | - | chr7.3:69432446-69432465 | MS.gene62549:intron | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | - | chr7.3:69430965-69430984 | MS.gene62549:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | - | chr7.3:69432903-69432922 | MS.gene62549:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr7.3:69431794-69431813 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | - | chr7.3:69431844-69431863 | MS.gene62549:CDS | 30.0% |
! | TCAGTTTTCAATTCAATGAG+TGG | + | chr7.3:69433590-69433609 | None:intergenic | 30.0% |
! | TGAGGCTTTAACAAATTAAG+CGG | - | chr7.3:69433175-69433194 | MS.gene62549:CDS | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr7.3:69433059-69433078 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | - | chr7.3:69432671-69432690 | MS.gene62549:intron | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | - | chr7.3:69432571-69432590 | MS.gene62549:intron | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr7.3:69431297-69431316 | MS.gene62549:CDS | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr7.3:69432951-69432970 | MS.gene62549:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | - | chr7.3:69432572-69432591 | MS.gene62549:intron | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | - | chr7.3:69432668-69432687 | MS.gene62549:intron | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | - | chr7.3:69431123-69431142 | MS.gene62549:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | - | chr7.3:69431124-69431143 | MS.gene62549:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | - | chr7.3:69432736-69432755 | MS.gene62549:intron | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr7.3:69431856-69431875 | MS.gene62549:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | - | chr7.3:69432226-69432245 | MS.gene62549:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | - | chr7.3:69430523-69430542 | MS.gene62549:intron | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | - | chr7.3:69432227-69432246 | MS.gene62549:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | - | chr7.3:69430858-69430877 | MS.gene62549:intron | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | + | chr7.3:69432561-69432580 | None:intergenic | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | - | chr7.3:69430706-69430725 | MS.gene62549:intron | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | - | chr7.3:69432073-69432092 | MS.gene62549:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | - | chr7.3:69430701-69430720 | MS.gene62549:intron | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | - | chr7.3:69433157-69433176 | MS.gene62549:CDS | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | - | chr7.3:69433132-69433151 | MS.gene62549:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | - | chr7.3:69430920-69430939 | MS.gene62549:intron | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | - | chr7.3:69430643-69430662 | MS.gene62549:intron | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | - | chr7.3:69431001-69431020 | MS.gene62549:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | + | chr7.3:69431432-69431451 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | + | chr7.3:69430684-69430703 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | - | chr7.3:69431697-69431716 | MS.gene62549:CDS | 35.0% |
! | GAGGCTTTAACAAATTAAGC+GGG | - | chr7.3:69433176-69433195 | MS.gene62549:CDS | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | - | chr7.3:69432509-69432528 | MS.gene62549:intron | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr7.3:69432156-69432175 | MS.gene62549:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | - | chr7.3:69431303-69431322 | MS.gene62549:CDS | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | - | chr7.3:69432029-69432048 | MS.gene62549:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr7.3:69431869-69431888 | MS.gene62549:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr7.3:69433005-69433024 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | + | chr7.3:69432738-69432757 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | - | chr7.3:69432086-69432105 | MS.gene62549:CDS | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | - | chr7.3:69432678-69432697 | MS.gene62549:intron | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | - | chr7.3:69431740-69431759 | MS.gene62549:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | - | chr7.3:69432739-69432758 | MS.gene62549:intron | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | + | chr7.3:69432192-69432211 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | + | chr7.3:69431550-69431569 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | + | chr7.3:69433083-69433102 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | - | chr7.3:69430377-69430396 | MS.gene62549:intron | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | - | chr7.3:69432403-69432422 | MS.gene62549:intron | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | - | chr7.3:69432635-69432654 | MS.gene62549:intron | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | - | chr7.3:69431436-69431455 | MS.gene62549:CDS | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | - | chr7.3:69432914-69432933 | MS.gene62549:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | - | chr7.3:69432634-69432653 | MS.gene62549:intron | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | - | chr7.3:69432792-69432811 | MS.gene62549:intron | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | + | chr7.3:69432780-69432799 | None:intergenic | 40.0% | |
GTCAATTCTGATGTAATGCG+CGG | - | chr7.3:69433533-69433552 | MS.gene62549:CDS | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | + | chr7.3:69432805-69432824 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | - | chr7.3:69432402-69432421 | MS.gene62549:intron | 40.0% | |
TCAAACCATATACACAGACC+AGG | - | chr7.3:69431804-69431823 | MS.gene62549:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | - | chr7.3:69431546-69431565 | MS.gene62549:CDS | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | + | chr7.3:69431135-69431154 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | + | chr7.3:69431805-69431824 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | - | chr7.3:69431664-69431683 | MS.gene62549:CDS | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | - | chr7.3:69432541-69432560 | MS.gene62549:intron | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | + | chr7.3:69432802-69432821 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | + | chr7.3:69433145-69433164 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | - | chr7.3:69432254-69432273 | MS.gene62549:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr7.3:69432997-69433016 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | - | chr7.3:69432681-69432700 | MS.gene62549:intron | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | - | chr7.3:69432085-69432104 | MS.gene62549:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | + | chr7.3:69430657-69430676 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | - | chr7.3:69430927-69430946 | MS.gene62549:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | - | chr7.3:69431010-69431029 | MS.gene62549:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | - | chr7.3:69431068-69431087 | MS.gene62549:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | + | chr7.3:69430669-69430688 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | + | chr7.3:69432045-69432064 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | - | chr7.3:69432304-69432323 | MS.gene62549:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | + | chr7.3:69432656-69432675 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | + | chr7.3:69430831-69430850 | None:intergenic | 45.0% | |
CTGTCTGTGAACCATCTGTT+GGG | - | chr7.3:69433027-69433046 | MS.gene62549:CDS | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | - | chr7.3:69430711-69430730 | MS.gene62549:intron | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | - | chr7.3:69431007-69431026 | MS.gene62549:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | - | chr7.3:69432245-69432264 | MS.gene62549:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | + | chr7.3:69432554-69432573 | None:intergenic | 45.0% | |
TGGGTGATTCTATCTTGCCT+TGG | - | chr7.3:69431412-69431431 | MS.gene62549:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | - | chr7.3:69432636-69432655 | MS.gene62549:intron | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | + | chr7.3:69431109-69431128 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | - | chr7.3:69432926-69432945 | MS.gene62549:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | + | chr7.3:69430720-69430739 | None:intergenic | 45.0% | |
TTGATATCGTTGCGCTTCAG+TGG | + | chr7.3:69432829-69432848 | None:intergenic | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | - | chr7.3:69432108-69432127 | MS.gene62549:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr7.3:69432091-69432110 | MS.gene62549:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr7.3:69430723-69430742 | MS.gene62549:intron | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | - | chr7.3:69431131-69431150 | MS.gene62549:CDS | 45.0% |
ACCAGCCTGGTCTGTGTATA+TGG | + | chr7.3:69431812-69431831 | None:intergenic | 50.0% | |
ACCATATACACAGACCAGGC+TGG | - | chr7.3:69431808-69431827 | MS.gene62549:CDS | 50.0% | |
AGGGTTGTCACAGTCGACAT+TGG | - | chr7.3:69432591-69432610 | MS.gene62549:intron | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | + | chr7.3:69432309-69432328 | None:intergenic | 50.0% | |
GCTGTCTGTGAACCATCTGT+TGG | - | chr7.3:69433026-69433045 | MS.gene62549:CDS | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | - | chr7.3:69432040-69432059 | MS.gene62549:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+GGG | - | chr7.3:69432592-69432611 | MS.gene62549:intron | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | - | chr7.3:69431877-69431896 | MS.gene62549:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | - | chr7.3:69432878-69432897 | MS.gene62549:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | - | chr7.3:69432919-69432938 | MS.gene62549:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | - | chr7.3:69431876-69431895 | MS.gene62549:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr7.3:69433041-69433060 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | - | chr7.3:69430933-69430952 | MS.gene62549:CDS | 50.0% |
ACTTCAACAACGCACCAGCC+TGG | + | chr7.3:69431825-69431844 | None:intergenic | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | - | chr7.3:69432918-69432937 | MS.gene62549:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | + | chr7.3:69432310-69432329 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | - | chr7.3:69432932-69432951 | MS.gene62549:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr7.3:69431014-69431033 | MS.gene62549:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | - | chr7.3:69430936-69430955 | MS.gene62549:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | - | chr7.3:69432881-69432900 | MS.gene62549:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | - | chr7.3:69430941-69430960 | MS.gene62549:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 69430357 | 69433676 | 69430357 | ID=MS.gene62549 |
chr7.3 | mRNA | 69430357 | 69433676 | 69430357 | ID=MS.gene62549.t1;Parent=MS.gene62549 |
chr7.3 | exon | 69432794 | 69433676 | 69432794 | ID=MS.gene62549.t1.exon1;Parent=MS.gene62549.t1 |
chr7.3 | CDS | 69432794 | 69433676 | 69432794 | ID=cds.MS.gene62549.t1;Parent=MS.gene62549.t1 |
chr7.3 | exon | 69430926 | 69432359 | 69430926 | ID=MS.gene62549.t1.exon2;Parent=MS.gene62549.t1 |
chr7.3 | CDS | 69430926 | 69432359 | 69430926 | ID=cds.MS.gene62549.t1;Parent=MS.gene62549.t1 |
chr7.3 | exon | 69430357 | 69430376 | 69430357 | ID=MS.gene62549.t1.exon3;Parent=MS.gene62549.t1 |
chr7.3 | CDS | 69430357 | 69430376 | 69430357 | ID=cds.MS.gene62549.t1;Parent=MS.gene62549.t1 |
Gene Sequence |
Protein sequence |