Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62670.t1 | XP_003630981.2 | 86.6 | 142 | 19 | 0 | 178 | 319 | 108 | 249 | 2.20E-58 | 236.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62670.t1 | P0DO17 | 73.6 | 140 | 37 | 0 | 178 | 317 | 107 | 246 | 4.3e-50 | 199.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62670.t1 | G7LBH0 | 86.6 | 142 | 19 | 0 | 178 | 319 | 108 | 249 | 1.6e-58 | 236.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene62670.t1 | TF | MYB-related |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62670.t1 | MTR_8g105810 | 86.620 | 142 | 19 | 0 | 178 | 319 | 108 | 249 | 3.48e-83 | 252 |
MS.gene62670.t1 | MTR_5g088010 | 86.331 | 139 | 14 | 2 | 1 | 134 | 1 | 139 | 1.08e-79 | 243 |
MS.gene62670.t1 | MTR_5g088060 | 90.152 | 132 | 13 | 0 | 1 | 132 | 218 | 349 | 1.08e-79 | 250 |
MS.gene62670.t1 | MTR_5g488160 | 90.152 | 132 | 13 | 0 | 1 | 132 | 218 | 349 | 1.08e-79 | 250 |
MS.gene62670.t1 | MTR_8g105790 | 91.473 | 129 | 11 | 0 | 190 | 318 | 119 | 247 | 3.33e-79 | 241 |
MS.gene62670.t1 | MTR_5g027570 | 65.714 | 140 | 37 | 3 | 3 | 132 | 30 | 168 | 7.58e-55 | 179 |
MS.gene62670.t1 | MTR_5g027550 | 58.394 | 137 | 41 | 3 | 1 | 132 | 29 | 154 | 1.17e-40 | 142 |
MS.gene62670.t1 | MTR_8g063600 | 61.842 | 76 | 27 | 2 | 53 | 127 | 103 | 177 | 8.31e-23 | 96.3 |
MS.gene62670.t1 | MTR_8g063870 | 60.000 | 75 | 29 | 1 | 56 | 130 | 93 | 166 | 1.12e-22 | 95.5 |
MS.gene62670.t1 | MTR_3g462790 | 63.380 | 71 | 20 | 3 | 57 | 125 | 149 | 215 | 1.41e-21 | 93.6 |
MS.gene62670.t1 | MTR_5g081860 | 61.333 | 75 | 27 | 2 | 50 | 123 | 119 | 192 | 2.33e-21 | 92.0 |
MS.gene62670.t1 | MTR_5g069710 | 63.380 | 71 | 20 | 3 | 57 | 125 | 134 | 200 | 2.88e-21 | 92.4 |
MS.gene62670.t1 | MTR_1g111830 | 65.672 | 67 | 20 | 1 | 57 | 123 | 126 | 189 | 4.86e-21 | 90.5 |
MS.gene62670.t1 | MTR_7g067080 | 53.750 | 80 | 32 | 2 | 46 | 124 | 131 | 206 | 2.01e-20 | 90.1 |
MS.gene62670.t1 | MTR_1g048660 | 56.410 | 78 | 31 | 1 | 51 | 128 | 8 | 82 | 6.26e-20 | 83.2 |
MS.gene62670.t1 | MTR_4g111975 | 55.128 | 78 | 30 | 3 | 53 | 128 | 135 | 209 | 1.02e-19 | 88.2 |
MS.gene62670.t1 | MTR_3g104370 | 44.792 | 96 | 50 | 1 | 57 | 149 | 93 | 188 | 5.73e-19 | 84.7 |
MS.gene62670.t1 | MTR_2g100930 | 55.385 | 65 | 26 | 1 | 57 | 121 | 111 | 172 | 3.57e-17 | 81.6 |
MS.gene62670.t1 | MTR_5g075760 | 42.241 | 116 | 64 | 2 | 12 | 127 | 64 | 176 | 9.50e-17 | 78.2 |
MS.gene62670.t1 | MTR_4g100630 | 40.678 | 118 | 53 | 5 | 15 | 121 | 47 | 158 | 1.46e-16 | 79.3 |
MS.gene62670.t1 | MTR_4g107230 | 71.111 | 45 | 13 | 0 | 57 | 101 | 86 | 130 | 4.19e-16 | 77.4 |
MS.gene62670.t1 | MTR_4g015130 | 58.333 | 60 | 22 | 1 | 65 | 124 | 3 | 59 | 4.88e-16 | 72.4 |
MS.gene62670.t1 | MTR_5g037080 | 71.111 | 45 | 13 | 0 | 57 | 101 | 104 | 148 | 6.42e-16 | 77.4 |
MS.gene62670.t1 | MTR_8g101650 | 53.846 | 65 | 26 | 1 | 57 | 121 | 107 | 167 | 7.10e-16 | 76.6 |
MS.gene62670.t1 | MTR_3g070110 | 55.556 | 72 | 28 | 2 | 56 | 123 | 96 | 167 | 1.63e-15 | 74.7 |
MS.gene62670.t1 | MTR_2g090305 | 42.045 | 88 | 41 | 2 | 57 | 144 | 30 | 107 | 2.83e-15 | 73.6 |
MS.gene62670.t1 | MTR_0036s0260 | 40.909 | 88 | 42 | 2 | 57 | 144 | 30 | 107 | 3.70e-15 | 73.6 |
MS.gene62670.t1 | MTR_6g092540 | 55.385 | 65 | 26 | 2 | 57 | 121 | 99 | 160 | 4.46e-15 | 74.7 |
MS.gene62670.t1 | MTR_5g075790 | 43.396 | 106 | 48 | 3 | 31 | 127 | 82 | 184 | 1.06e-14 | 72.4 |
MS.gene62670.t1 | MTR_1g033620 | 57.627 | 59 | 21 | 2 | 71 | 128 | 21 | 76 | 7.75e-14 | 70.5 |
MS.gene62670.t1 | MTR_1g023000 | 47.706 | 109 | 45 | 4 | 144 | 251 | 16 | 113 | 1.17e-13 | 69.7 |
MS.gene62670.t1 | MTR_1g044660 | 46.789 | 109 | 46 | 4 | 144 | 251 | 16 | 113 | 2.00e-13 | 69.3 |
MS.gene62670.t1 | MTR_1g083180 | 38.889 | 126 | 56 | 7 | 23 | 130 | 13 | 135 | 4.52e-13 | 67.0 |
MS.gene62670.t1 | MTR_6g052140 | 45.872 | 109 | 47 | 4 | 144 | 251 | 16 | 113 | 7.63e-13 | 67.4 |
MS.gene62670.t1 | MTR_6g052220 | 45.872 | 109 | 47 | 4 | 144 | 251 | 16 | 113 | 7.63e-13 | 67.4 |
MS.gene62670.t1 | MTR_6g043490 | 53.191 | 47 | 22 | 0 | 57 | 103 | 109 | 155 | 8.92e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62670.t1 | AT2G01770 | 69.784 | 139 | 42 | 0 | 178 | 316 | 108 | 246 | 1.19e-65 | 207 |
MS.gene62670.t1 | AT5G04760 | 63.158 | 76 | 25 | 1 | 48 | 123 | 92 | 164 | 5.71e-23 | 95.1 |
MS.gene62670.t1 | AT5G58900 | 58.242 | 91 | 31 | 4 | 37 | 125 | 124 | 209 | 1.57e-22 | 95.5 |
MS.gene62670.t1 | AT5G08520 | 62.500 | 72 | 23 | 2 | 53 | 123 | 115 | 183 | 6.18e-22 | 94.4 |
MS.gene62670.t1 | AT5G01200 | 64.286 | 70 | 21 | 2 | 57 | 125 | 148 | 214 | 1.82e-21 | 92.4 |
MS.gene62670.t1 | AT2G38090 | 57.317 | 82 | 30 | 3 | 50 | 129 | 135 | 213 | 6.63e-21 | 91.3 |
MS.gene62670.t1 | AT3G11280 | 39.416 | 137 | 67 | 4 | 57 | 191 | 129 | 251 | 2.35e-20 | 89.0 |
MS.gene62670.t1 | AT3G11280 | 39.416 | 137 | 67 | 4 | 57 | 191 | 129 | 251 | 2.35e-20 | 89.0 |
MS.gene62670.t1 | AT5G61620 | 34.444 | 180 | 90 | 4 | 49 | 220 | 101 | 260 | 2.63e-20 | 90.1 |
MS.gene62670.t1 | AT1G49010 | 57.333 | 75 | 27 | 3 | 53 | 125 | 131 | 202 | 7.96e-20 | 88.6 |
MS.gene62670.t1 | AT5G05790 | 60.000 | 75 | 25 | 3 | 53 | 125 | 128 | 199 | 1.32e-19 | 87.4 |
MS.gene62670.t1 | AT5G05790 | 60.000 | 75 | 25 | 3 | 53 | 125 | 128 | 199 | 1.32e-19 | 87.4 |
MS.gene62670.t1 | AT5G23650 | 54.430 | 79 | 32 | 2 | 53 | 130 | 117 | 192 | 5.86e-19 | 86.3 |
MS.gene62670.t1 | AT3G10580 | 55.882 | 68 | 25 | 1 | 57 | 124 | 97 | 159 | 1.31e-17 | 81.3 |
MS.gene62670.t1 | AT3G10580 | 55.882 | 68 | 25 | 1 | 57 | 124 | 97 | 159 | 1.57e-17 | 81.6 |
MS.gene62670.t1 | AT4G09450 | 57.353 | 68 | 26 | 1 | 57 | 124 | 93 | 157 | 2.44e-17 | 79.3 |
MS.gene62670.t1 | AT5G47390 | 56.061 | 66 | 24 | 2 | 57 | 121 | 98 | 159 | 1.51e-16 | 79.7 |
MS.gene62670.t1 | AT1G70000 | 71.111 | 45 | 13 | 0 | 57 | 101 | 100 | 144 | 3.48e-16 | 77.4 |
MS.gene62670.t1 | AT1G70000 | 71.111 | 45 | 13 | 0 | 57 | 101 | 100 | 144 | 3.48e-16 | 77.4 |
MS.gene62670.t1 | AT5G56840 | 55.385 | 65 | 27 | 1 | 57 | 121 | 93 | 155 | 6.21e-16 | 76.3 |
MS.gene62670.t1 | AT1G19000 | 45.745 | 94 | 43 | 3 | 13 | 101 | 58 | 148 | 9.32e-16 | 76.6 |
MS.gene62670.t1 | AT1G19000 | 45.745 | 94 | 43 | 3 | 13 | 101 | 58 | 148 | 9.32e-16 | 76.6 |
MS.gene62670.t1 | AT1G74840 | 71.111 | 45 | 13 | 0 | 57 | 101 | 98 | 142 | 2.12e-15 | 74.7 |
MS.gene62670.t1 | AT1G74840 | 71.111 | 45 | 13 | 0 | 57 | 101 | 98 | 142 | 2.57e-15 | 75.1 |
MS.gene62670.t1 | AT3G16350 | 66.667 | 45 | 15 | 0 | 57 | 101 | 139 | 183 | 2.77e-15 | 76.3 |
MS.gene62670.t1 | AT3G10590 | 52.941 | 68 | 28 | 2 | 57 | 124 | 113 | 176 | 2.62e-13 | 68.2 |
MS.gene62670.t1 | AT5G35530 | 52.632 | 76 | 31 | 2 | 144 | 219 | 16 | 86 | 1.50e-12 | 67.0 |
MS.gene62670.t1 | AT3G53870 | 45.872 | 109 | 47 | 5 | 144 | 251 | 16 | 113 | 8.49e-12 | 64.7 |
MS.gene62670.t1 | AT2G31610 | 45.872 | 109 | 47 | 5 | 144 | 251 | 16 | 113 | 1.14e-11 | 64.3 |
Find 64 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCCATATCTTTCACATTT+TGG | 0.113024 | 4.2:-1197916 | None:intergenic |
CAATGTGTCATTCTTGTTTA+AGG | 0.128626 | 4.2:-1197975 | None:intergenic |
TTATTCTGGTGTTGAGTTTA+TGG | 0.197121 | 4.2:+1199322 | MS.gene62670:CDS |
GCACTATACAATGCTCTTCT+TGG | 0.231503 | 4.2:-1201483 | None:intergenic |
TTGATTGCTTTGCTTATCTT+TGG | 0.233804 | 4.2:+1201612 | MS.gene62670:CDS |
CTGTCCAATGCCCTTTCCTT+GGG | 0.257949 | 4.2:-1197506 | None:intergenic |
ATTGCATCCGCAGCCGCTTT+TGG | 0.269444 | 4.2:+1201705 | MS.gene62670:CDS |
CTTGGGGCATGACTTTCTTC+TGG | 0.281577 | 4.2:-1197489 | None:intergenic |
TTTCTTCACTGAATTGAATC+TGG | 0.283210 | 4.2:+1199265 | MS.gene62670:CDS |
GGAATAAAGCCACATGAATA+TGG | 0.285076 | 4.2:+1200246 | MS.gene62670:CDS |
ATTGCTATTGCTTACGTATT+GGG | 0.289589 | 4.2:+1201513 | MS.gene62670:CDS |
GCAGAAATATTGGCTGAATA+TGG | 0.300052 | 4.2:+1200225 | MS.gene62670:intron |
TCTGTCCAATGCCCTTTCCT+TGG | 0.314383 | 4.2:-1197507 | None:intergenic |
CTTGCCGAGGATGGTTATTC+TGG | 0.318525 | 4.2:+1199308 | MS.gene62670:CDS |
CCACCAAAATGTGAAAGATA+TGG | 0.357161 | 4.2:+1197913 | MS.gene62670:CDS |
ACCACCCGACTCAATGATAT+TGG | 0.374047 | 4.2:-1197382 | None:intergenic |
TCATGATTTCAGTGTGCATT+CGG | 0.380331 | 4.2:-1199349 | None:intergenic |
TACAATGCTCTTCTTGGATC+TGG | 0.387148 | 4.2:-1201477 | None:intergenic |
AGAACAGCCTCTGATGCATT+TGG | 0.398525 | 4.2:-1201570 | None:intergenic |
CACTGAATTGAATCTGGAGT+TGG | 0.402758 | 4.2:+1199271 | MS.gene62670:CDS |
CAAAGGCTTTCAGTATTTGA+TGG | 0.412282 | 4.2:+1201733 | MS.gene62670:CDS |
AAATATTTCAAAAGAATTTG+TGG | 0.425853 | 4.2:+1197841 | MS.gene62670:CDS |
CATGATTTCAGTGTGCATTC+GGG | 0.428609 | 4.2:-1199348 | None:intergenic |
TTTGTGAGTGCATCGACAAC+AGG | 0.433517 | 4.2:-1200270 | None:intergenic |
AATTGCTATTGCTTACGTAT+TGG | 0.433881 | 4.2:+1201512 | MS.gene62670:CDS |
TTTGTCAAGGGATGCGTCAC+CGG | 0.439105 | 4.2:+1201636 | MS.gene62670:CDS |
CCGGCATGGCAGATTTGAGC+TGG | 0.439437 | 4.2:+1201443 | MS.gene62670:intron |
GAACAACAACAGGAGAAAAC+TGG | 0.441684 | 4.2:+1197357 | MS.gene62670:CDS |
GCTTATCTTTGGCTTTGTCA+AGG | 0.444850 | 4.2:+1201623 | MS.gene62670:CDS |
CTTATCTTTGGCTTTGTCAA+GGG | 0.448135 | 4.2:+1201624 | MS.gene62670:CDS |
TGTGAAAGATATGGAAAAGA+AGG | 0.454324 | 4.2:+1197922 | MS.gene62670:CDS |
GCATAGCATGGAACAACAAC+AGG | 0.469925 | 4.2:+1197347 | None:intergenic |
GTAGTGGGTGGCAGAAATAT+TGG | 0.477125 | 4.2:+1200215 | MS.gene62670:intron |
GGCTGTTCTTGTTTCAGTGG+TGG | 0.490681 | 4.2:+1201584 | MS.gene62670:CDS |
AAAGTCATGCCCCAAGGAAA+GGG | 0.493395 | 4.2:+1197496 | MS.gene62670:CDS |
AAAAGCGGCTGCGGATGCAA+TGG | 0.504225 | 4.2:-1201703 | None:intergenic |
AGAGGCTGTTCTTGTTTCAG+TGG | 0.506618 | 4.2:+1201581 | MS.gene62670:CDS |
TGCCAAACCAAAAGCGGCTG+CGG | 0.507106 | 4.2:-1201712 | None:intergenic |
ACTCGCACGCAAGTTGCTCT+TGG | 0.512509 | 4.2:+1199380 | MS.gene62670:CDS |
GGCACCAATATCATTGAGTC+GGG | 0.516068 | 4.2:+1197378 | MS.gene62670:CDS |
ATGCCCCAAGGAAAGGGCAT+TGG | 0.524782 | 4.2:+1197502 | MS.gene62670:CDS |
ACAAGAGAGCTTGCCGAGGA+TGG | 0.527128 | 4.2:+1199299 | MS.gene62670:CDS |
GAAAGTCATGCCCCAAGGAA+AGG | 0.527463 | 4.2:+1197495 | MS.gene62670:CDS |
GCACACTGAAATCATGATCA+AGG | 0.534775 | 4.2:+1199355 | MS.gene62670:CDS |
CGGCATGGCAGATTTGAGCT+GGG | 0.539287 | 4.2:+1201444 | MS.gene62670:intron |
GCATGGCTAGCAACTTGAGT+TGG | 0.543969 | 4.2:-1197875 | None:intergenic |
GCATTTGGAATGAACATGTA+AGG | 0.552012 | 4.2:-1201555 | None:intergenic |
TGTCCAATGCCCTTTCCTTG+GGG | 0.558952 | 4.2:-1197505 | None:intergenic |
ATTAGAGTTTAGAATTGCAA+CGG | 0.560593 | 4.2:-1197406 | None:intergenic |
AACACCAGAATAACCATCCT+CGG | 0.562935 | 4.2:-1199312 | None:intergenic |
TCACAAAGAATCCTCAAGCA+TGG | 0.563786 | 4.2:+1200286 | MS.gene62670:CDS |
CACAAAGAATCCTCAAGCAT+GGG | 0.570100 | 4.2:+1200287 | MS.gene62670:CDS |
TGGCACCAATATCATTGAGT+CGG | 0.577067 | 4.2:+1197377 | MS.gene62670:CDS |
GCTATTGCTTACGTATTGGG+TGG | 0.579839 | 4.2:+1201516 | MS.gene62670:CDS |
AGCCTTTGCCAAACCAAAAG+CGG | 0.580742 | 4.2:-1201718 | None:intergenic |
ATGAACATGTAAGGAATGAG+AGG | 0.596128 | 4.2:-1201546 | None:intergenic |
ACCAATATCATTGAGTCGGG+TGG | 0.607339 | 4.2:+1197381 | MS.gene62670:CDS |
CTTAAACAAGAATGACACAT+TGG | 0.607666 | 4.2:+1197976 | MS.gene62670:CDS |
GTTCATTCCAAATGCATCAG+AGG | 0.611477 | 4.2:+1201563 | MS.gene62670:CDS |
ATAAAATCAACCCATGCTTG+AGG | 0.616319 | 4.2:-1200297 | None:intergenic |
CAGAAGAAAGTCATGCCCCA+AGG | 0.636413 | 4.2:+1197490 | MS.gene62670:CDS |
GCTTTCGAAACTGCTCTCAT+CGG | 0.655495 | 4.2:+1201678 | MS.gene62670:CDS |
AAGGAAAGGGCATTGGACAG+AGG | 0.658250 | 4.2:+1197509 | MS.gene62670:CDS |
ACAACAGGTCCATATTCATG+TGG | 0.687604 | 4.2:-1200255 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATTAATTAATAACAACA+AGG | - | chr4.2:1198799-1198818 | None:intergenic | 10.0% |
!! | CTCAAAATAAATAAAAAAAT+TGG | - | chr4.2:1199558-1199577 | None:intergenic | 10.0% |
!! | TAAAAATATGAAAAGAAATA+TGG | - | chr4.2:1199869-1199888 | None:intergenic | 10.0% |
!! | TATATGTTAATTGTTAATTA+AGG | + | chr4.2:1200744-1200763 | MS.gene62670:intron | 10.0% |
!!! | ATGTTATTTTTGAAATATAT+CGG | - | chr4.2:1201170-1201189 | None:intergenic | 10.0% |
!!! | ATTTATTTTTGTTTCATTTT+GGG | + | chr4.2:1199470-1199489 | MS.gene62670:intron | 10.0% |
!!! | ATTTATTTTTTGACTTATTA+AGG | + | chr4.2:1198676-1198695 | MS.gene62670:intron | 10.0% |
!!! | CTAAAAAATGTTTTATTTTT+TGG | - | chr4.2:1201234-1201253 | None:intergenic | 10.0% |
!!! | TATTTATTTTTGTTTCATTT+TGG | + | chr4.2:1199469-1199488 | MS.gene62670:intron | 10.0% |
!!! | TATTTTTATTAATTGATTGA+AGG | + | chr4.2:1198464-1198483 | MS.gene62670:intron | 10.0% |
!! | AAATATTTCAAAAGAATTTG+TGG | + | chr4.2:1197841-1197860 | MS.gene62670:CDS | 15.0% |
!! | AAGAAAGTTATTTAAACAAA+AGG | - | chr4.2:1201364-1201383 | None:intergenic | 15.0% |
!! | AATTGCATGTAATAAAAATT+TGG | + | chr4.2:1201197-1201216 | MS.gene62670:intron | 15.0% |
!! | ACAAAATTGAAAAATAACTA+CGG | - | chr4.2:1198329-1198348 | None:intergenic | 15.0% |
!! | ATATTTCAAAAATAACATTG+AGG | + | chr4.2:1201172-1201191 | MS.gene62670:intron | 15.0% |
!! | TAATATTAAAGAAAAGAACA+CGG | + | chr4.2:1199887-1199906 | MS.gene62670:intron | 15.0% |
!! | TATTTCAAAAATAACATTGA+GGG | + | chr4.2:1201173-1201192 | MS.gene62670:intron | 15.0% |
!!! | TAACATTTTTATCAAACAAT+GGG | - | chr4.2:1199713-1199732 | None:intergenic | 15.0% |
!!! | TGAAGATTTTTTTTTTTTGA+AGG | + | chr4.2:1201087-1201106 | MS.gene62670:intron | 15.0% |
!!! | TGATTTTTGTAACTTTTATT+TGG | + | chr4.2:1198083-1198102 | MS.gene62670:intron | 15.0% |
!!! | TGTATTTTATTTGGTATTTT+TGG | + | chr4.2:1198119-1198138 | MS.gene62670:intron | 15.0% |
!!! | TGTTATTTTTGAAATATATC+GGG | - | chr4.2:1201169-1201188 | None:intergenic | 15.0% |
!!! | TTATATATAGAATTTTGATG+TGG | + | chr4.2:1199769-1199788 | MS.gene62670:intron | 15.0% |
!!! | TTTTGTTTAAATAACTTTCT+TGG | + | chr4.2:1201363-1201382 | MS.gene62670:intron | 15.0% |
!! | AAACAAACAAGGTAAAATTA+AGG | - | chr4.2:1198604-1198623 | None:intergenic | 20.0% |
!! | AATATTACACAAAATAACCA+CGG | - | chr4.2:1198448-1198467 | None:intergenic | 20.0% |
!! | ACATTTAGTAAAAACAAACA+AGG | - | chr4.2:1198615-1198634 | None:intergenic | 20.0% |
!! | ATATATATATTTCACATCAG+TGG | + | chr4.2:1199940-1199959 | MS.gene62670:intron | 20.0% |
!! | ATCACTATACTAAAAAGTAA+AGG | - | chr4.2:1199213-1199232 | None:intergenic | 20.0% |
!! | CATTTGTTTAGTTATGAATA+TGG | + | chr4.2:1197701-1197720 | MS.gene62670:intron | 20.0% |
!! | CTAAATATCTATAATCCATT+TGG | + | chr4.2:1199097-1199116 | MS.gene62670:intron | 20.0% |
!! | GATGTTAAAAATTTCTTTGA+GGG | - | chr4.2:1201289-1201308 | None:intergenic | 20.0% |
!! | GTATTATGATTTACTTATGT+TGG | + | chr4.2:1199020-1199039 | MS.gene62670:intron | 20.0% |
!! | TAAAAATAACTCTCAAACAT+AGG | - | chr4.2:1197573-1197592 | None:intergenic | 20.0% |
!! | TAAAGAAAATGAGTTGTTAT+AGG | + | chr4.2:1198706-1198725 | MS.gene62670:intron | 20.0% |
!! | TAAATCATAATACCCAATAT+AGG | - | chr4.2:1199013-1199032 | None:intergenic | 20.0% |
!! | TACATGTAATAATTGCAAAT+TGG | + | chr4.2:1200693-1200712 | MS.gene62670:intron | 20.0% |
!! | TATATATATTTCACATCAGT+GGG | + | chr4.2:1199941-1199960 | MS.gene62670:intron | 20.0% |
!! | TATCATTATCCATAATACAA+TGG | + | chr4.2:1201001-1201020 | MS.gene62670:intron | 20.0% |
!! | TCACTATACTAAAAAGTAAA+GGG | - | chr4.2:1199212-1199231 | None:intergenic | 20.0% |
!! | TGATGTTAAAAATTTCTTTG+AGG | - | chr4.2:1201290-1201309 | None:intergenic | 20.0% |
!! | TGTTTGATAAAAATGTTACA+TGG | + | chr4.2:1199715-1199734 | MS.gene62670:intron | 20.0% |
!!! | AAATGATTTTTTACATCAGT+TGG | - | chr4.2:1200190-1200209 | None:intergenic | 20.0% |
!!! | AACTATTTTGTGTTGTATTT+TGG | + | chr4.2:1199599-1199618 | MS.gene62670:intron | 20.0% |
!!! | ACTATTTTGTGTTGTATTTT+GGG | + | chr4.2:1199600-1199619 | MS.gene62670:intron | 20.0% |
!!! | ATATATAGGTTGTTTTTGAA+GGG | + | chr4.2:1197788-1197807 | MS.gene62670:intron | 20.0% |
!!! | ATGTTTTTCTTTCCTATATT+GGG | + | chr4.2:1198998-1199017 | MS.gene62670:intron | 20.0% |
!!! | CAAATGTTTAACTTTCTTTT+TGG | - | chr4.2:1200360-1200379 | None:intergenic | 20.0% |
!!! | GAAGTGTTATATGATTTATA+TGG | + | chr4.2:1198873-1198892 | MS.gene62670:intron | 20.0% |
!!! | GTAACATTTTTATCAAACAA+TGG | - | chr4.2:1199714-1199733 | None:intergenic | 20.0% |
!!! | GTTCACTAATGTATTTTATT+TGG | + | chr4.2:1198110-1198129 | MS.gene62670:intron | 20.0% |
!!! | TATATATAGGTTGTTTTTGA+AGG | + | chr4.2:1197787-1197806 | MS.gene62670:intron | 20.0% |
!!! | TTGTTTTTACTAAATGTGAA+TGG | + | chr4.2:1198618-1198637 | MS.gene62670:intron | 20.0% |
!!! | TTTTTGACTTATTAAGGAAA+TGG | + | chr4.2:1198682-1198701 | MS.gene62670:intron | 20.0% |
! | AAAAATCATTTCTGTAGTAG+TGG | + | chr4.2:1200199-1200218 | MS.gene62670:intron | 25.0% |
! | AAAATCATTTCTGTAGTAGT+GGG | + | chr4.2:1200200-1200219 | MS.gene62670:intron | 25.0% |
! | ACAGATAGATATCTATTCAA+TGG | - | chr4.2:1198397-1198416 | None:intergenic | 25.0% |
! | AGAATCTTTACTAAAAGTGA+TGG | + | chr4.2:1198283-1198302 | MS.gene62670:intron | 25.0% |
! | ATAACCAACAAATAAAGATG+TGG | + | chr4.2:1200920-1200939 | MS.gene62670:intron | 25.0% |
! | ATATCGTGTTATATATACAG+AGG | - | chr4.2:1200619-1200638 | None:intergenic | 25.0% |
! | ATATCTACAATGAGTACAAT+AGG | - | chr4.2:1198827-1198846 | None:intergenic | 25.0% |
! | ATGTCTTCAAGATGAAAAAA+GGG | + | chr4.2:1200467-1200486 | MS.gene62670:intron | 25.0% |
! | CACATTCATTCTCTATATAT+AGG | + | chr4.2:1197774-1197793 | MS.gene62670:intron | 25.0% |
! | CATTTAGTTAAGTATTAAGC+AGG | - | chr4.2:1201067-1201086 | None:intergenic | 25.0% |
! | GAAAAAAGGGAATGAATATT+TGG | + | chr4.2:1200480-1200499 | MS.gene62670:intron | 25.0% |
! | TATGTCTTCAAGATGAAAAA+AGG | + | chr4.2:1200466-1200485 | MS.gene62670:intron | 25.0% |
!! | ATTAGAGTTTAGAATTGCAA+CGG | - | chr4.2:1197409-1197428 | None:intergenic | 25.0% |
!! | CATGTTTTTCTTTCCTATAT+TGG | + | chr4.2:1198997-1199016 | MS.gene62670:intron | 25.0% |
!! | TATAATCCATTTGGTCATTT+TGG | + | chr4.2:1199106-1199125 | MS.gene62670:intron | 25.0% |
!! | TTTCCATATCTTTCACATTT+TGG | - | chr4.2:1197919-1197938 | None:intergenic | 25.0% |
!!! | ATGTTTAACTTTCTTTTTGG+AGG | - | chr4.2:1200357-1200376 | None:intergenic | 25.0% |
!!! | CTTTGAATTTTAACTATCGT+TGG | + | chr4.2:1199420-1199439 | MS.gene62670:intron | 25.0% |
!!! | TATATAGGTTGTTTTTGAAG+GGG | + | chr4.2:1197789-1197808 | MS.gene62670:intron | 25.0% |
!!! | TGTTTAACTTTCTTTTTGGA+GGG | - | chr4.2:1200356-1200375 | None:intergenic | 25.0% |
!!! | TTGGTGGTTAAAGTATTTTT+GGG | - | chr4.2:1197900-1197919 | None:intergenic | 25.0% |
!!! | TTTGGTGGTTAAAGTATTTT+TGG | - | chr4.2:1197901-1197920 | None:intergenic | 25.0% |
AAATAACTTTCTTGGAGAAG+AGG | + | chr4.2:1201371-1201390 | MS.gene62670:intron | 30.0% | |
AACAAATAAAGATGTGGAGA+AGG | + | chr4.2:1200926-1200945 | MS.gene62670:intron | 30.0% | |
AAGTTTCCAAAATGACCAAA+TGG | - | chr4.2:1199115-1199134 | None:intergenic | 30.0% | |
ACAAATAAAGATGTGGAGAA+GGG | + | chr4.2:1200927-1200946 | MS.gene62670:intron | 30.0% | |
ACTTCTTCTGTTAATGATGT+TGG | - | chr4.2:1198858-1198877 | None:intergenic | 30.0% | |
ATTGCATCAACTAACTAAGT+AGG | - | chr4.2:1198212-1198231 | None:intergenic | 30.0% | |
CAAACGTCAAATTCTCAAAT+TGG | - | chr4.2:1198911-1198930 | None:intergenic | 30.0% | |
CAATGTAGAGTTGAAATTGT+TGG | - | chr4.2:1198020-1198039 | None:intergenic | 30.0% | |
CATGAATAAGTGAGAAATCA+AGG | + | chr4.2:1200581-1200600 | MS.gene62670:intron | 30.0% | |
CGAACTTATCACGATTAATT+TGG | + | chr4.2:1200863-1200882 | MS.gene62670:intron | 30.0% | |
CTTAAACAAGAATGACACAT+TGG | + | chr4.2:1197976-1197995 | MS.gene62670:CDS | 30.0% | |
CTTGATTTCTCACTTATTCA+TGG | - | chr4.2:1200583-1200602 | None:intergenic | 30.0% | |
GAATAGATATCTATCTGTGT+TGG | + | chr4.2:1198399-1198418 | MS.gene62670:intron | 30.0% | |
GAATGACTAATATAACTTCC+TGG | + | chr4.2:1199830-1199849 | MS.gene62670:intron | 30.0% | |
TATCCATAATACAATGGAAC+AGG | + | chr4.2:1201007-1201026 | MS.gene62670:intron | 30.0% | |
TGTGAAAGATATGGAAAAGA+AGG | + | chr4.2:1197922-1197941 | MS.gene62670:CDS | 30.0% | |
TTAACAATTTCCTTACTCGA+TGG | + | chr4.2:1201420-1201439 | MS.gene62670:intron | 30.0% | |
TTAACATCATTGCTTGTTCT+TGG | + | chr4.2:1201301-1201320 | MS.gene62670:intron | 30.0% | |
TTGATTGCTTTGCTTATCTT+TGG | + | chr4.2:1201612-1201631 | MS.gene62670:CDS | 30.0% | |
TTTCTTCACTGAATTGAATC+TGG | + | chr4.2:1199265-1199284 | MS.gene62670:CDS | 30.0% | |
! | AATTGCTATTGCTTACGTAT+TGG | + | chr4.2:1201512-1201531 | MS.gene62670:CDS | 30.0% |
! | ATATGTGATTATGCATCGAT+TGG | + | chr4.2:1200777-1200796 | MS.gene62670:intron | 30.0% |
! | ATTGCTATTGCTTACGTATT+GGG | + | chr4.2:1201513-1201532 | MS.gene62670:CDS | 30.0% |
! | CAATGTGTCATTCTTGTTTA+AGG | - | chr4.2:1197978-1197997 | None:intergenic | 30.0% |
! | TTATTCTGGTGTTGAGTTTA+TGG | + | chr4.2:1199322-1199341 | MS.gene62670:CDS | 30.0% |
! | TTCTCCACATCTTTATTTGT+TGG | - | chr4.2:1200927-1200946 | None:intergenic | 30.0% |
!! | ATTTGGTCATTTTGGAAACT+TGG | + | chr4.2:1199114-1199133 | MS.gene62670:intron | 30.0% |
!! | GTTTAACTTTCTTTTTGGAG+GGG | - | chr4.2:1200355-1200374 | None:intergenic | 30.0% |
!! | TTTGGGTTTTTGTGATGTAT+AGG | + | chr4.2:1199617-1199636 | MS.gene62670:intron | 30.0% |
!!! | TGAATTTTAACTATCGTTGG+TGG | + | chr4.2:1199423-1199442 | MS.gene62670:intron | 30.0% |
!!! | TGTTAGTCATTGACTTTTTC+CGG | + | chr4.2:1198346-1198365 | MS.gene62670:intron | 30.0% |
AAAATCTCACTAACTCACTC+AGG | + | chr4.2:1198572-1198591 | MS.gene62670:intron | 35.0% | |
ATAAAATCAACCCATGCTTG+AGG | - | chr4.2:1200300-1200319 | None:intergenic | 35.0% | |
ATGAACATGTAAGGAATGAG+AGG | - | chr4.2:1201549-1201568 | None:intergenic | 35.0% | |
ATGTTCAATTGTCCTTCTCT+TGG | - | chr4.2:1199157-1199176 | None:intergenic | 35.0% | |
CATGGCTAAGAATATTGTTG+TGG | + | chr4.2:1198243-1198262 | MS.gene62670:intron | 35.0% | |
CCACCAAAATGTGAAAGATA+TGG | + | chr4.2:1197913-1197932 | MS.gene62670:CDS | 35.0% | |
CGATGCATAATCACATATCA+TGG | - | chr4.2:1200775-1200794 | None:intergenic | 35.0% | |
GACTAATATAACTTCCTGGT+TGG | + | chr4.2:1199834-1199853 | MS.gene62670:intron | 35.0% | |
GGAATAAAGCCACATGAATA+TGG | + | chr4.2:1200246-1200265 | MS.gene62670:CDS | 35.0% | |
GGGATGAAAAAACATGGAAA+GGG | + | chr4.2:1197809-1197828 | MS.gene62670:CDS | 35.0% | |
GTACACACTACATTCATTTG+TGG | - | chr4.2:1199688-1199707 | None:intergenic | 35.0% | |
TACTTAATGCCTAGTGGTTT+GGG | + | chr4.2:1198968-1198987 | MS.gene62670:intron | 35.0% | |
TATATTGACCAGATGAGAAG+TGG | + | chr4.2:1200540-1200559 | MS.gene62670:intron | 35.0% | |
TATCTCATAAAGCCAAGAGA+AGG | + | chr4.2:1199142-1199161 | MS.gene62670:intron | 35.0% | |
TATGGATATTAAAGCCAACC+AGG | - | chr4.2:1199851-1199870 | None:intergenic | 35.0% | |
TCATGATTTCAGTGTGCATT+CGG | - | chr4.2:1199352-1199371 | None:intergenic | 35.0% | |
TGTTGAAATATACAAGTCCG+TGG | + | chr4.2:1198428-1198447 | MS.gene62670:intron | 35.0% | |
TTATCCATGTGCTCAACTAA+AGG | - | chr4.2:1200904-1200923 | None:intergenic | 35.0% | |
TTGAAGGGGATGAAAAAACA+TGG | + | chr4.2:1197803-1197822 | MS.gene62670:CDS | 35.0% | |
TTGTGATGTATAGGTGTGAT+GGG | + | chr4.2:1199626-1199645 | MS.gene62670:intron | 35.0% | |
TTTCAACTCTACATTGTTGC+TGG | + | chr4.2:1198024-1198043 | MS.gene62670:intron | 35.0% | |
TTTGTGATGTATAGGTGTGA+TGG | + | chr4.2:1199625-1199644 | MS.gene62670:intron | 35.0% | |
! | ATGCAATACTTTTGCAAGCA+TGG | + | chr4.2:1198225-1198244 | MS.gene62670:intron | 35.0% |
! | CCATATCTTTCACATTTTGG+TGG | - | chr4.2:1197916-1197935 | None:intergenic | 35.0% |
! | GCAGAAATATTGGCTGAATA+TGG | + | chr4.2:1200225-1200244 | MS.gene62670:intron | 35.0% |
! | GCATTTGGAATGAACATGTA+AGG | - | chr4.2:1201558-1201577 | None:intergenic | 35.0% |
! | TAATTTGGAACCGTTGGATT+TGG | + | chr4.2:1200878-1200897 | MS.gene62670:intron | 35.0% |
!! | CTTATCTTTGGCTTTGTCAA+GGG | + | chr4.2:1201624-1201643 | MS.gene62670:CDS | 35.0% |
!!! | ACTTTTGATAGGTTTGTTGC+CGG | - | chr4.2:1201658-1201677 | None:intergenic | 35.0% |
!!! | GGTTAAAGTATTTTTGGGCA+TGG | - | chr4.2:1197895-1197914 | None:intergenic | 35.0% |
!!! | GTTTCGAAAGCACTTTTGAT+AGG | - | chr4.2:1201669-1201688 | None:intergenic | 35.0% |
AAACCTGATGTGAAAGGATG+TGG | + | chr4.2:1200109-1200128 | MS.gene62670:intron | 40.0% | |
AACACCAGAATAACCATCCT+CGG | - | chr4.2:1199315-1199334 | None:intergenic | 40.0% | |
AAGATCAAGTGACCGATTGA+GGG | - | chr4.2:1198523-1198542 | None:intergenic | 40.0% | |
AAGTGGAACTCTGGATAAGT+TGG | + | chr4.2:1200557-1200576 | MS.gene62670:intron | 40.0% | |
ACAACAGGTCCATATTCATG+TGG | - | chr4.2:1200258-1200277 | None:intergenic | 40.0% | |
AGTGAGATTGAGAGAGAGTT+CGG | - | chr4.2:1198546-1198565 | None:intergenic | 40.0% | |
ATGAATACACCCAAACCACT+AGG | - | chr4.2:1198980-1198999 | None:intergenic | 40.0% | |
CAACTAAAGGCCAAATCCAA+CGG | - | chr4.2:1200891-1200910 | None:intergenic | 40.0% | |
CACAAAGAATCCTCAAGCAT+GGG | + | chr4.2:1200287-1200306 | MS.gene62670:CDS | 40.0% | |
CATGATTTCAGTGTGCATTC+GGG | - | chr4.2:1199351-1199370 | None:intergenic | 40.0% | |
CGACCTGTTCCATTGTATTA+TGG | - | chr4.2:1201013-1201032 | None:intergenic | 40.0% | |
CTACTTAATGCCTAGTGGTT+TGG | + | chr4.2:1198967-1198986 | MS.gene62670:intron | 40.0% | |
GAACAACAACAGGAGAAAAC+TGG | + | chr4.2:1197357-1197376 | MS.gene62670:CDS | 40.0% | |
GATACTGTGTACCACTAACA+CGG | - | chr4.2:1198375-1198394 | None:intergenic | 40.0% | |
GCACACTGAAATCATGATCA+AGG | + | chr4.2:1199355-1199374 | MS.gene62670:CDS | 40.0% | |
GCACTATACAATGCTCTTCT+TGG | - | chr4.2:1201486-1201505 | None:intergenic | 40.0% | |
GGAAGATGTTATGCTAGAGA+AGG | - | chr4.2:1199191-1199210 | None:intergenic | 40.0% | |
GGGGATGAAAAAACATGGAA+AGG | + | chr4.2:1197808-1197827 | MS.gene62670:CDS | 40.0% | |
GTTCATTCCAAATGCATCAG+AGG | + | chr4.2:1201563-1201582 | MS.gene62670:CDS | 40.0% | |
TACAATGCTCTTCTTGGATC+TGG | - | chr4.2:1201480-1201499 | None:intergenic | 40.0% | |
TCACAAAGAATCCTCAAGCA+TGG | + | chr4.2:1200286-1200305 | MS.gene62670:CDS | 40.0% | |
TCTTCCACTGTTGGAATAGA+CGG | - | chr4.2:1200053-1200072 | None:intergenic | 40.0% | |
TGGCACCAATATCATTGAGT+CGG | + | chr4.2:1197377-1197396 | MS.gene62670:CDS | 40.0% | |
! | ATCAATCGAGTTCGTTTTGC+AGG | - | chr4.2:1201043-1201062 | None:intergenic | 40.0% |
! | ATCATTTCTGTAGTAGTGGG+TGG | + | chr4.2:1200203-1200222 | MS.gene62670:intron | 40.0% |
! | CACATCACGTCACTTTACAT+CGG | + | chr4.2:1200138-1200157 | MS.gene62670:intron | 40.0% |
! | CACGATTAATTTGGAACCGT+TGG | + | chr4.2:1200872-1200891 | MS.gene62670:intron | 40.0% |
! | CACTGAATTGAATCTGGAGT+TGG | + | chr4.2:1199271-1199290 | MS.gene62670:CDS | 40.0% |
! | GTTTGCTACTTAATGCCTAG+TGG | + | chr4.2:1198962-1198981 | MS.gene62670:intron | 40.0% |
! | TTGATTGAAGGTTGATCTCC+CGG | + | chr4.2:1198476-1198495 | MS.gene62670:intron | 40.0% |
!! | GATGGTAGTAGTTCTGATGT+TGG | + | chr4.2:1198301-1198320 | MS.gene62670:intron | 40.0% |
!! | GCTTATCTTTGGCTTTGTCA+AGG | + | chr4.2:1201623-1201642 | MS.gene62670:CDS | 40.0% |
AAAAACATGGAAAGGGACGC+TGG | + | chr4.2:1197816-1197835 | MS.gene62670:CDS | 45.0% | |
AAAGTCATGCCCCAAGGAAA+GGG | + | chr4.2:1197496-1197515 | MS.gene62670:CDS | 45.0% | |
AAGTCCGTCTATTCCAACAG+TGG | + | chr4.2:1200046-1200065 | MS.gene62670:intron | 45.0% | |
ACCAATATCATTGAGTCGGG+TGG | + | chr4.2:1197381-1197400 | MS.gene62670:CDS | 45.0% | |
ACCACCCGACTCAATGATAT+TGG | - | chr4.2:1197385-1197404 | None:intergenic | 45.0% | |
AGAACAGCCTCTGATGCATT+TGG | - | chr4.2:1201573-1201592 | None:intergenic | 45.0% | |
AGCCTTTGCCAAACCAAAAG+CGG | - | chr4.2:1201721-1201740 | None:intergenic | 45.0% | |
AGTCCACATCCTTTCACATC+AGG | - | chr4.2:1200115-1200134 | None:intergenic | 45.0% | |
ATCAGTTCCTCTTCCACTGT+TGG | - | chr4.2:1200062-1200081 | None:intergenic | 45.0% | |
ATCGATGCAGCTATTGAGTC+CGG | - | chr4.2:1198498-1198517 | None:intergenic | 45.0% | |
CAATTTCCTTACTCGATGGC+CGG | + | chr4.2:1201424-1201443 | MS.gene62670:intron | 45.0% | |
CAGTCGAAACCTGATGTGAA+AGG | + | chr4.2:1200103-1200122 | MS.gene62670:intron | 45.0% | |
CGATGTAAAGTGACGTGATG+TGG | - | chr4.2:1200140-1200159 | None:intergenic | 45.0% | |
GAAGATCAAGTGACCGATTG+AGG | - | chr4.2:1198524-1198543 | None:intergenic | 45.0% | |
GCTATTGCTTACGTATTGGG+TGG | + | chr4.2:1201516-1201535 | MS.gene62670:CDS | 45.0% | |
GCTTTCGAAACTGCTCTCAT+CGG | + | chr4.2:1201678-1201697 | MS.gene62670:CDS | 45.0% | |
GGCACCAATATCATTGAGTC+GGG | + | chr4.2:1197378-1197397 | MS.gene62670:CDS | 45.0% | |
GTCTATTCCAACAGTGGAAG+AGG | + | chr4.2:1200052-1200071 | MS.gene62670:intron | 45.0% | |
TGTACCACTAACACGGTAAC+CGG | - | chr4.2:1198368-1198387 | None:intergenic | 45.0% | |
! | AGAGGCTGTTCTTGTTTCAG+TGG | + | chr4.2:1201581-1201600 | MS.gene62670:CDS | 45.0% |
! | GTATAGGTGTGATGGGAAGA+AGG | + | chr4.2:1199633-1199652 | MS.gene62670:intron | 45.0% |
! | TTGGCCTTTAGTTGAGCACA+TGG | + | chr4.2:1200897-1200916 | MS.gene62670:intron | 45.0% |
! | TTTGTGAGTGCATCGACAAC+AGG | - | chr4.2:1200273-1200292 | None:intergenic | 45.0% |
! | TTTTACAAGAGAGCTTGCCG+AGG | + | chr4.2:1199295-1199314 | MS.gene62670:CDS | 45.0% |
! | TTTTCCGGTTACCGTGTTAG+TGG | + | chr4.2:1198361-1198380 | MS.gene62670:intron | 45.0% |
!! | ATGCATCGATTGGAACACGT+TGG | + | chr4.2:1200787-1200806 | MS.gene62670:intron | 45.0% |
!! | GTAGTGGGTGGCAGAAATAT+TGG | + | chr4.2:1200215-1200234 | MS.gene62670:intron | 45.0% |
!!! | ATATATGAATTTTTTTTATA+TGG | + | chr4.2:1199507-1199526 | MS.gene62670:intron | 5.0% |
CAGAAGAAAGTCATGCCCCA+AGG | + | chr4.2:1197490-1197509 | MS.gene62670:CDS | 50.0% | |
CCAGAGTTCCACTTCTCATC+TGG | - | chr4.2:1200551-1200570 | None:intergenic | 50.0% | |
CCAGATGAGAAGTGGAACTC+TGG | + | chr4.2:1200548-1200567 | MS.gene62670:intron | 50.0% | |
CTGTCCAATGCCCTTTCCTT+GGG | - | chr4.2:1197509-1197528 | None:intergenic | 50.0% | |
CTTGCCGAGGATGGTTATTC+TGG | + | chr4.2:1199308-1199327 | MS.gene62670:CDS | 50.0% | |
CTTGGGGCATGACTTTCTTC+TGG | - | chr4.2:1197492-1197511 | None:intergenic | 50.0% | |
GAAAGTCATGCCCCAAGGAA+AGG | + | chr4.2:1197495-1197514 | MS.gene62670:CDS | 50.0% | |
GCATGGCTAGCAACTTGAGT+TGG | - | chr4.2:1197878-1197897 | None:intergenic | 50.0% | |
TCGATGCAGCTATTGAGTCC+GGG | - | chr4.2:1198497-1198516 | None:intergenic | 50.0% | |
TCTGTCCAATGCCCTTTCCT+TGG | - | chr4.2:1197510-1197529 | None:intergenic | 50.0% | |
TGTCCAATGCCCTTTCCTTG+GGG | - | chr4.2:1197508-1197527 | None:intergenic | 50.0% | |
TTTGTCAAGGGATGCGTCAC+CGG | + | chr4.2:1201636-1201655 | MS.gene62670:CDS | 50.0% | |
! | CTGCATCGATCTCCCTCAAT+CGG | + | chr4.2:1198508-1198527 | MS.gene62670:intron | 50.0% |
! | GGCTGTTCTTGTTTCAGTGG+TGG | + | chr4.2:1201584-1201603 | MS.gene62670:CDS | 50.0% |
!! | AAGGAAAGGGCATTGGACAG+AGG | + | chr4.2:1197509-1197528 | MS.gene62670:CDS | 50.0% |
!!! | AGCCGCTTTTGGTTTGGCAA+AGG | + | chr4.2:1201716-1201735 | MS.gene62670:CDS | 50.0% |
AAAAGCGGCTGCGGATGCAA+TGG | - | chr4.2:1201706-1201725 | None:intergenic | 55.0% | |
ACAAGAGAGCTTGCCGAGGA+TGG | + | chr4.2:1199299-1199318 | MS.gene62670:CDS | 55.0% | |
ACTCGCACGCAAGTTGCTCT+TGG | + | chr4.2:1199380-1199399 | MS.gene62670:CDS | 55.0% | |
CCAGCTCAAATCTGCCATGC+CGG | - | chr4.2:1201446-1201465 | None:intergenic | 55.0% | |
CGGCATGGCAGATTTGAGCT+GGG | + | chr4.2:1201444-1201463 | MS.gene62670:intron | 55.0% | |
TGCCAAACCAAAAGCGGCTG+CGG | - | chr4.2:1201715-1201734 | None:intergenic | 55.0% | |
! | ATGCCCCAAGGAAAGGGCAT+TGG | + | chr4.2:1197502-1197521 | MS.gene62670:CDS | 55.0% |
!! | ATTGCATCCGCAGCCGCTTT+TGG | + | chr4.2:1201705-1201724 | MS.gene62670:CDS | 55.0% |
!!! | ATCCGCAGCCGCTTTTGGTT+TGG | + | chr4.2:1201710-1201729 | MS.gene62670:CDS | 55.0% |
CCGGCATGGCAGATTTGAGC+TGG | + | chr4.2:1201443-1201462 | MS.gene62670:intron | 60.0% | |
TCCTTACTCGATGGCCGGCA+TGG | + | chr4.2:1201429-1201448 | MS.gene62670:intron | 60.0% | |
GCCATGCCGGCCATCGAGTA+AGG | - | chr4.2:1201433-1201452 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 1197354 | 1201752 | 1197354 | ID=MS.gene62670 |
chr4.2 | mRNA | 1197354 | 1201752 | 1197354 | ID=MS.gene62670.t1;Parent=MS.gene62670 |
chr4.2 | exon | 1197354 | 1197541 | 1197354 | ID=MS.gene62670.t1.exon1;Parent=MS.gene62670.t1 |
chr4.2 | CDS | 1197354 | 1197541 | 1197354 | ID=cds.MS.gene62670.t1;Parent=MS.gene62670.t1 |
chr4.2 | exon | 1197796 | 1197997 | 1197796 | ID=MS.gene62670.t1.exon2;Parent=MS.gene62670.t1 |
chr4.2 | CDS | 1197796 | 1197997 | 1197796 | ID=cds.MS.gene62670.t1;Parent=MS.gene62670.t1 |
chr4.2 | exon | 1199224 | 1199401 | 1199224 | ID=MS.gene62670.t1.exon3;Parent=MS.gene62670.t1 |
chr4.2 | CDS | 1199224 | 1199401 | 1199224 | ID=cds.MS.gene62670.t1;Parent=MS.gene62670.t1 |
chr4.2 | exon | 1200229 | 1200325 | 1200229 | ID=MS.gene62670.t1.exon4;Parent=MS.gene62670.t1 |
chr4.2 | CDS | 1200229 | 1200325 | 1200229 | ID=cds.MS.gene62670.t1;Parent=MS.gene62670.t1 |
chr4.2 | exon | 1201455 | 1201752 | 1201455 | ID=MS.gene62670.t1.exon5;Parent=MS.gene62670.t1 |
chr4.2 | CDS | 1201455 | 1201752 | 1201455 | ID=cds.MS.gene62670.t1;Parent=MS.gene62670.t1 |
Gene Sequence |
Protein sequence |