AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene62868

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62868.t1 MTR_4g101680 100.000 144 0 0 1 144 1 144 8.45e-107 308
MS.gene62868.t1 MTR_4g036030 86.806 144 19 0 1 144 1 144 4.37e-96 281
MS.gene62868.t1 MTR_5g012080 87.500 144 17 1 1 143 1 144 5.01e-95 278
MS.gene62868.t1 MTR_5g021710 82.143 140 25 0 5 144 6 145 6.17e-87 258
MS.gene62868.t1 MTR_8g076110 80.000 140 28 0 5 144 4 143 7.41e-84 248
MS.gene62868.t1 MTR_8g024480 80.435 138 27 0 1 138 9 146 3.63e-79 240
MS.gene62868.t1 MTR_1g096430 74.306 144 37 0 1 144 1 144 3.73e-79 237
MS.gene62868.t1 MTR_4g035590 75.000 140 30 1 7 141 8 147 2.20e-74 226
MS.gene62868.t1 MTR_2g062730 74.101 139 35 1 7 144 10 148 3.04e-73 223
MS.gene62868.t1 MTR_2g064090 59.124 137 55 1 7 143 6 141 6.34e-59 186
MS.gene62868.t1 MTR_3g435150 65.385 130 42 1 7 136 16 142 9.04e-58 182
MS.gene62868.t1 MTR_2g078700 63.433 134 44 2 5 136 21 151 1.76e-57 183
MS.gene62868.t1 MTR_6g477900 57.692 130 54 1 7 136 6 134 8.43e-57 177
MS.gene62868.t1 MTR_4g108760 64.615 130 43 1 7 136 17 143 9.81e-57 181
MS.gene62868.t1 MTR_6g084430 60.305 131 49 1 6 136 4 131 1.76e-54 174
MS.gene62868.t1 MTR_7g011130 62.308 130 46 1 10 139 22 148 3.07e-54 174
MS.gene62868.t1 MTR_5g076850 58.462 130 53 1 7 136 6 134 6.56e-54 179
MS.gene62868.t1 MTR_7g085260 60.448 134 46 2 7 136 17 147 7.53e-54 174
MS.gene62868.t1 MTR_6g012670 60.000 130 49 1 7 136 20 146 7.68e-54 172
MS.gene62868.t1 MTR_3g064580 58.779 131 51 2 7 136 6 134 1.30e-53 179
MS.gene62868.t1 MTR_3g070030 58.015 131 52 1 8 138 20 147 2.98e-53 171
MS.gene62868.t1 MTR_1g008740 59.701 134 48 3 7 137 13 143 7.12e-53 170
MS.gene62868.t1 MTR_1g008740 59.701 134 48 3 7 137 27 157 1.03e-52 170
MS.gene62868.t1 MTR_4g081870 54.286 140 61 1 5 144 7 143 6.67e-52 166
MS.gene62868.t1 MTR_2g064470 59.091 132 49 2 5 136 9 135 7.83e-52 166
MS.gene62868.t1 MTR_3g116070 58.088 136 51 3 7 139 23 155 8.41e-52 168
MS.gene62868.t1 MTR_7g011120 61.417 127 46 1 10 136 11 134 2.88e-51 165
MS.gene62868.t1 MTR_3g109340 57.143 133 52 2 7 137 22 151 7.95e-51 165
MS.gene62868.t1 MTR_3g109340 57.143 133 52 2 7 137 22 151 8.14e-51 165
MS.gene62868.t1 MTR_5g041940 54.615 130 56 1 6 135 2 128 1.05e-50 162
MS.gene62868.t1 MTR_1g069805 54.074 135 57 2 5 137 8 139 1.76e-50 162
MS.gene62868.t1 MTR_7g085220 50.340 147 61 2 5 142 6 149 2.23e-50 164
MS.gene62868.t1 MTR_7g097090 54.815 135 56 2 5 137 8 139 2.33e-50 162
MS.gene62868.t1 MTR_6g032770 56.391 133 51 3 7 136 18 146 7.11e-50 163
MS.gene62868.t1 MTR_5g014300 52.899 138 57 2 5 135 4 140 1.22e-49 162
MS.gene62868.t1 MTR_4g089135 53.285 137 59 2 6 140 14 147 3.90e-49 160
MS.gene62868.t1 MTR_3g096920 56.154 130 53 2 6 135 6 131 5.32e-49 159
MS.gene62868.t1 MTR_4g098630 55.224 134 56 2 5 135 4 136 6.49e-49 159
MS.gene62868.t1 MTR_3g096920 56.589 129 52 2 7 135 7 131 7.89e-49 159
MS.gene62868.t1 MTR_3g093040 52.273 132 62 1 3 134 104 234 8.42e-49 159
MS.gene62868.t1 MTR_3g088110 54.815 135 57 2 1 135 1 131 9.90e-49 158
MS.gene62868.t1 MTR_8g094580 54.815 135 57 2 1 135 1 131 1.40e-48 157
MS.gene62868.t1 MTR_5g069030 55.303 132 58 1 3 134 21 151 1.60e-48 165
MS.gene62868.t1 MTR_2g080010 52.941 136 59 2 6 139 14 146 1.91e-48 159
MS.gene62868.t1 MTR_6g011860 52.941 136 60 2 1 135 9 141 2.63e-48 160
MS.gene62868.t1 MTR_8g467490 53.435 131 56 2 9 137 16 143 4.58e-48 159
MS.gene62868.t1 MTR_2157s0010 53.030 132 56 2 7 135 8 136 7.45e-47 152
MS.gene62868.t1 MTR_7g100990 53.030 132 57 2 6 135 10 138 7.63e-47 154
MS.gene62868.t1 MTR_7g005280 52.941 136 56 2 7 140 15 144 8.98e-47 152
MS.gene62868.t1 MTR_5g040420 52.632 133 58 2 7 137 14 143 1.19e-46 155
MS.gene62868.t1 MTR_3g096140 51.079 139 64 2 9 144 9 146 1.87e-46 152
MS.gene62868.t1 MTR_3g093050 51.515 132 63 1 3 134 18 148 2.35e-46 158
MS.gene62868.t1 MTR_1g097300 54.135 133 56 3 9 139 21 150 2.45e-46 158
MS.gene62868.t1 MTR_3g093050 51.515 132 63 1 3 134 18 148 2.61e-46 159
MS.gene62868.t1 MTR_1g090720 56.800 125 53 1 9 133 44 167 4.07e-46 156
MS.gene62868.t1 MTR_8g063550 53.125 128 59 1 9 136 8 134 5.36e-46 155
MS.gene62868.t1 MTR_2g079990 54.264 129 56 1 7 135 16 141 1.14e-45 152
MS.gene62868.t1 MTR_2g068920 53.285 137 57 3 7 138 20 154 1.71e-45 150
MS.gene62868.t1 MTR_3g096140 51.079 139 64 2 9 144 9 146 1.85e-45 151
MS.gene62868.t1 MTR_2g079990 54.264 129 56 1 7 135 16 141 1.91e-45 152
MS.gene62868.t1 MTR_2g093810 52.308 130 57 2 8 135 15 141 2.02e-45 150
MS.gene62868.t1 MTR_2g068880 53.285 137 57 3 7 138 21 155 3.84e-45 149
MS.gene62868.t1 MTR_4g134460 52.308 130 58 2 7 135 54 180 7.21e-45 152
MS.gene62868.t1 MTR_8g063550 53.125 128 59 1 9 136 8 134 8.77e-45 149
MS.gene62868.t1 MTR_8g059170 53.488 129 57 1 7 135 14 139 8.92e-45 149
MS.gene62868.t1 MTR_8g063550 53.125 128 59 1 9 136 8 134 1.16e-44 151
MS.gene62868.t1 MTR_3g070040 53.125 128 54 1 11 138 12 133 2.24e-44 148
MS.gene62868.t1 MTR_4g075980 53.383 133 56 2 9 138 17 146 2.60e-44 147
MS.gene62868.t1 MTR_0036s0150 53.906 128 57 2 9 135 7 133 7.22e-44 151
MS.gene62868.t1 MTR_1g090723 53.906 128 57 2 9 135 10 136 1.82e-43 150
MS.gene62868.t1 MTR_1g090723 53.906 128 57 2 9 135 10 136 2.06e-43 150
MS.gene62868.t1 MTR_1g090723 53.906 128 57 2 9 135 10 136 2.32e-43 150
MS.gene62868.t1 MTR_2g086880 51.163 129 61 1 5 133 16 142 2.45e-43 149
MS.gene62868.t1 MTR_8g099750 50.694 144 61 4 2 140 9 147 6.32e-43 141
MS.gene62868.t1 MTR_8g093580 52.344 128 60 1 9 136 8 134 6.48e-43 147
MS.gene62868.t1 MTR_2g086880 51.163 129 61 1 5 133 16 142 1.17e-42 148
MS.gene62868.t1 MTR_5g090970 50.000 132 60 2 7 135 18 146 3.81e-42 142
MS.gene62868.t1 MTR_5g090970 50.000 132 59 3 7 135 18 145 2.58e-40 137
MS.gene62868.t1 MTR_3g098810 46.377 138 65 2 2 135 9 141 5.81e-39 130
MS.gene62868.t1 MTR_3g098810 46.377 138 65 2 2 135 9 141 5.96e-38 129
MS.gene62868.t1 MTR_3g096140 47.200 125 62 2 23 144 2 125 5.51e-36 126
MS.gene62868.t1 MTR_8g023840 47.887 142 66 5 2 137 3 142 6.17e-36 127
MS.gene62868.t1 MTR_4g052620 45.113 133 64 4 8 134 6 135 5.71e-35 122
MS.gene62868.t1 MTR_8g023860 47.761 134 65 4 3 133 8 139 8.26e-35 125
MS.gene62868.t1 MTR_2g086690 45.522 134 63 6 8 134 5 135 1.31e-32 115
MS.gene62868.t1 MTR_4g094302 43.511 131 61 3 7 135 11 130 8.72e-32 111
MS.gene62868.t1 MTR_4g094302 43.511 131 61 3 7 135 11 130 5.87e-31 110
MS.gene62868.t1 MTR_7g105170 39.850 133 76 3 6 134 3 135 5.56e-29 106
MS.gene62868.t1 MTR_8g023900 43.077 130 69 4 7 133 12 139 1.27e-28 109
MS.gene62868.t1 MTR_8g023900 44.882 127 65 4 10 133 196 320 1.91e-27 105
MS.gene62868.t1 MTR_8g023880 41.333 150 67 6 1 133 1 146 4.20e-28 104
MS.gene62868.t1 MTR_8g023930 42.308 130 70 4 7 133 24 151 1.87e-27 105
MS.gene62868.t1 MTR_8g094580 58.904 73 29 1 63 135 6 77 2.03e-25 97.1
MS.gene62868.t1 MTR_7g070140 48.780 82 40 1 61 140 15 96 1.86e-23 89.4
MS.gene62868.t1 MTR_8g093790 34.848 132 67 5 7 138 10 122 5.64e-16 71.2
MS.gene62868.t1 MTR_3g096400 34.351 131 75 4 7 135 7 128 2.27e-15 70.1
MS.gene62868.t1 MTR_7g083330 30.303 132 87 4 7 137 18 145 3.43e-15 69.3
MS.gene62868.t1 MTR_7g083360 28.906 128 86 4 7 133 10 133 6.16e-14 65.1
MS.gene62868.t1 MTR_2g014680 30.128 156 87 6 1 139 47 197 1.56e-12 63.5
MS.gene62868.t1 MTR_1g087190 52.083 48 22 1 9 55 7 54 8.13e-12 57.0
MS.gene62868.t1 MTR_7g070150 58.333 36 15 0 106 141 8 43 3.27e-11 56.6
MS.gene62868.t1 MTR_4g078875 28.025 157 90 5 1 139 42 193 6.85e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene62868.t1 AT1G12260 86.806 144 19 0 1 144 1 144 3.50e-95 278
MS.gene62868.t1 AT1G12260 86.806 144 19 0 1 144 1 144 9.03e-95 279
MS.gene62868.t1 AT1G62700 85.417 144 21 0 1 144 1 144 5.25e-93 275
MS.gene62868.t1 AT1G62700 85.417 144 21 0 1 144 1 144 5.25e-93 275
MS.gene62868.t1 AT2G18060 81.884 138 25 0 7 144 9 146 4.77e-85 253
MS.gene62868.t1 AT2G18060 81.884 138 25 0 7 144 9 146 4.77e-85 253
MS.gene62868.t1 AT4G36160 81.884 138 25 0 7 144 14 151 6.79e-85 253
MS.gene62868.t1 AT4G36160 81.884 138 25 0 7 144 10 147 7.11e-85 253
MS.gene62868.t1 AT4G36160 81.884 138 25 0 7 144 10 147 7.11e-85 253
MS.gene62868.t1 AT5G62380 80.142 141 28 0 1 141 1 141 1.24e-84 251
MS.gene62868.t1 AT5G62380 80.142 141 28 0 1 141 1 141 1.24e-84 251
MS.gene62868.t1 AT2G46770 79.710 138 28 0 1 138 10 147 2.67e-80 241
MS.gene62868.t1 AT5G66300 76.259 139 32 1 7 144 12 150 6.09e-79 235
MS.gene62868.t1 AT3G61910 77.206 136 31 0 1 136 5 140 1.39e-77 233
MS.gene62868.t1 AT1G32770 78.676 136 29 0 1 136 10 145 6.37e-76 230
MS.gene62868.t1 AT1G71930 73.333 135 36 0 5 139 7 141 1.60e-75 228
MS.gene62868.t1 AT1G71930 73.333 135 36 0 5 139 7 141 1.60e-75 228
MS.gene62868.t1 AT4G10350 76.154 130 31 0 7 136 9 138 5.09e-73 222
MS.gene62868.t1 AT1G33280 73.134 134 36 0 7 140 8 141 2.35e-72 219
MS.gene62868.t1 AT1G79580 71.631 141 35 2 7 144 17 155 3.21e-70 216
MS.gene62868.t1 AT1G79580 71.631 141 35 2 7 144 17 155 3.21e-70 216
MS.gene62868.t1 AT1G79580 71.631 141 35 2 7 144 17 155 3.21e-70 216
MS.gene62868.t1 AT1G79580 71.631 141 35 2 7 144 17 155 3.21e-70 216
MS.gene62868.t1 AT1G79580 71.631 141 35 2 7 144 17 155 3.21e-70 216
MS.gene62868.t1 AT3G18400 62.687 134 47 1 6 139 4 134 1.26e-58 184
MS.gene62868.t1 AT3G17730 59.231 130 52 1 7 136 6 134 1.88e-57 179
MS.gene62868.t1 AT5G61430 63.077 130 45 1 7 136 16 142 1.89e-56 179
MS.gene62868.t1 AT3G29035 63.846 130 44 1 7 136 24 150 3.96e-56 178
MS.gene62868.t1 AT5G07680 62.308 130 46 1 7 136 3 129 3.25e-55 176
MS.gene62868.t1 AT5G07680 62.308 130 46 1 7 136 17 143 5.89e-55 175
MS.gene62868.t1 AT1G65910 59.231 130 52 1 7 136 6 134 6.07e-55 182
MS.gene62868.t1 AT5G39610 63.077 130 45 1 7 136 20 146 6.16e-55 174
MS.gene62868.t1 AT2G24430 59.398 133 49 2 7 137 16 145 6.90e-54 172
MS.gene62868.t1 AT2G24430 59.398 133 49 2 7 137 16 145 6.90e-54 172
MS.gene62868.t1 AT3G15170 61.194 134 47 2 5 136 18 148 7.24e-54 172
MS.gene62868.t1 AT5G53950 61.654 133 46 2 6 136 16 145 8.54e-54 174
MS.gene62868.t1 AT1G54330 60.465 129 50 1 7 135 6 133 2.07e-53 171
MS.gene62868.t1 AT1G69490 58.779 131 51 1 5 135 7 134 2.13e-53 169
MS.gene62868.t1 AT5G17260 55.639 133 58 1 7 139 6 137 2.93e-53 174
MS.gene62868.t1 AT3G03200 57.692 130 54 1 7 136 6 134 4.69e-53 174
MS.gene62868.t1 AT5G46590 59.091 132 52 2 5 135 4 134 5.30e-53 169
MS.gene62868.t1 AT5G46590 59.091 132 52 2 5 135 4 134 5.95e-53 169
MS.gene62868.t1 AT1G76420 58.088 136 52 2 7 140 22 154 1.04e-52 169
MS.gene62868.t1 AT5G18270 58.015 131 51 2 7 136 21 148 3.48e-52 168
MS.gene62868.t1 AT5G18270 58.015 131 51 2 7 136 21 148 4.14e-52 168
MS.gene62868.t1 AT3G10490 54.286 140 60 2 5 141 25 163 6.63e-52 165
MS.gene62868.t1 AT3G04060 58.015 131 51 2 7 136 20 147 4.43e-51 166
MS.gene62868.t1 AT3G12977 57.895 133 51 3 5 136 16 144 4.62e-51 164
MS.gene62868.t1 AT3G10480 55.634 142 59 2 3 141 23 163 5.19e-51 168
MS.gene62868.t1 AT3G10480 55.634 142 59 2 3 141 23 163 5.66e-51 168
MS.gene62868.t1 AT4G35580 56.061 132 57 1 3 134 5 135 6.55e-51 169
MS.gene62868.t1 AT4G35580 56.061 132 57 1 3 134 5 135 7.23e-51 169
MS.gene62868.t1 AT4G35580 56.061 132 57 1 3 134 5 135 7.39e-51 169
MS.gene62868.t1 AT3G10490 54.286 140 60 2 5 141 25 163 2.94e-50 166
MS.gene62868.t1 AT3G04070 55.882 136 52 2 5 135 8 140 4.65e-50 163
MS.gene62868.t1 AT1G33060 53.788 132 60 1 3 134 20 150 6.50e-50 169
MS.gene62868.t1 AT1G33060 53.788 132 60 1 3 134 20 150 6.57e-50 169
MS.gene62868.t1 AT1G56010 56.489 131 53 2 7 136 19 146 7.45e-50 162
MS.gene62868.t1 AT3G04070 55.882 136 52 2 5 135 8 140 7.98e-50 163
MS.gene62868.t1 AT5G63790 56.154 130 53 2 6 135 49 174 1.90e-49 160
MS.gene62868.t1 AT5G63790 56.154 130 53 2 6 135 59 184 2.06e-49 161
MS.gene62868.t1 AT4G17980 55.639 133 56 2 5 135 4 135 2.13e-49 159
MS.gene62868.t1 AT1G61110 54.962 131 55 2 6 135 15 142 4.03e-49 160
MS.gene62868.t1 AT4G17980 55.639 133 56 2 5 135 4 135 6.35e-49 159
MS.gene62868.t1 AT1G01720 54.074 135 58 2 1 135 1 131 7.53e-49 158
MS.gene62868.t1 AT5G08790 54.815 135 57 2 1 135 1 131 1.60e-48 157
MS.gene62868.t1 AT2G33480 52.985 134 57 1 6 139 14 141 1.65e-48 157
MS.gene62868.t1 AT2G33480 52.985 134 57 1 6 139 14 141 1.72e-48 157
MS.gene62868.t1 AT5G39820 54.887 133 55 2 7 137 20 149 2.18e-48 159
MS.gene62868.t1 AT1G77450 55.385 130 54 2 6 135 9 134 2.27e-48 156
MS.gene62868.t1 AT5G04410 54.887 133 59 1 3 135 5 136 5.23e-48 162
MS.gene62868.t1 AT4G27410 55.814 129 54 1 7 135 14 139 1.77e-47 155
MS.gene62868.t1 AT2G43000 54.264 129 56 1 9 137 20 145 2.11e-47 154
MS.gene62868.t1 AT3G10500 50.345 145 68 2 3 144 5 148 2.21e-47 160
MS.gene62868.t1 AT1G32510 50.355 141 62 2 5 138 4 143 1.27e-46 152
MS.gene62868.t1 AT3G10480 47.399 173 54 4 5 141 25 196 8.56e-46 156
MS.gene62868.t1 AT1G34180 48.872 133 67 1 9 141 18 149 1.78e-45 154
MS.gene62868.t1 AT4G27410 51.049 143 56 2 7 135 14 156 2.39e-45 150
MS.gene62868.t1 AT4G28530 50.000 152 53 4 5 137 8 155 3.47e-45 150
MS.gene62868.t1 AT1G34180 48.872 133 67 1 9 141 18 149 3.96e-45 155
MS.gene62868.t1 AT1G26870 52.344 128 56 2 9 134 18 142 5.56e-45 152
MS.gene62868.t1 AT4G10350 78.824 85 18 0 52 136 7 91 6.06e-45 149
MS.gene62868.t1 AT3G15510 53.435 131 56 2 11 139 21 148 9.04e-45 150
MS.gene62868.t1 AT3G15500 52.713 129 58 1 7 135 14 139 9.42e-45 149
MS.gene62868.t1 AT5G13180 50.000 136 60 2 2 135 9 138 1.18e-44 147
MS.gene62868.t1 AT5G24590 51.880 133 62 2 3 134 9 140 1.54e-44 151
MS.gene62868.t1 AT5G04395 47.682 151 66 3 5 142 26 176 1.84e-44 144
MS.gene62868.t1 AT1G34190 50.370 135 62 3 9 141 18 149 2.46e-44 152
MS.gene62868.t1 AT1G52890 52.713 129 58 1 7 135 14 139 2.53e-44 147
MS.gene62868.t1 AT2G02450 50.769 130 60 2 7 135 51 177 3.27e-44 149
MS.gene62868.t1 AT2G02450 50.769 130 60 2 7 135 51 177 4.11e-44 149
MS.gene62868.t1 AT2G27300 48.092 131 66 1 3 133 10 138 4.81e-44 147
MS.gene62868.t1 AT1G34180 46.259 147 62 3 9 141 18 161 9.72e-43 147
MS.gene62868.t1 AT2G17040 47.368 133 64 2 9 138 8 137 1.25e-42 142
MS.gene62868.t1 AT3G49530 48.120 133 67 2 3 134 9 140 1.85e-42 145
MS.gene62868.t1 AT1G34180 46.259 147 62 3 9 141 18 161 1.95e-42 147
MS.gene62868.t1 AT5G09330 48.485 132 67 1 5 136 4 134 2.37e-42 146
MS.gene62868.t1 AT5G09330 48.485 132 67 1 5 136 4 134 2.37e-42 146
MS.gene62868.t1 AT5G09330 48.485 132 67 1 5 136 4 134 2.37e-42 146
MS.gene62868.t1 AT5G09330 48.485 132 67 1 5 136 4 134 2.37e-42 146
MS.gene62868.t1 AT5G09330 48.485 132 67 1 5 136 4 134 2.37e-42 146
MS.gene62868.t1 AT5G22290 48.062 129 65 1 5 133 19 145 3.25e-42 143
MS.gene62868.t1 AT5G64060 47.727 132 68 1 5 136 4 134 3.65e-42 143
MS.gene62868.t1 AT3G49530 48.120 133 67 2 3 134 9 140 3.83e-42 145
MS.gene62868.t1 AT1G52880 54.135 133 54 2 11 139 21 150 4.04e-42 142
MS.gene62868.t1 AT3G44290 44.882 127 68 1 9 135 16 140 4.42e-41 137
MS.gene62868.t1 AT3G44290 44.882 127 68 1 9 135 16 140 6.29e-40 137
MS.gene62868.t1 AT3G12910 48.571 140 61 4 9 142 23 157 2.33e-39 134
MS.gene62868.t1 AT1G32870 49.612 129 62 2 7 135 10 135 3.46e-36 130
MS.gene62868.t1 AT1G32870 49.612 129 62 2 7 135 10 135 3.70e-36 130
MS.gene62868.t1 AT1G32870 49.612 129 62 2 7 135 46 171 4.64e-36 130
MS.gene62868.t1 AT5G61430 67.073 82 24 1 55 136 1 79 1.53e-35 124
MS.gene62868.t1 AT3G12977 60.000 85 31 1 52 136 10 91 7.42e-33 115
MS.gene62868.t1 AT1G56010 68.056 72 23 0 65 136 8 79 9.32e-33 116
MS.gene62868.t1 AT2G33480 54.878 82 37 0 58 139 3 84 2.32e-29 106
MS.gene62868.t1 AT5G22380 40.769 130 69 4 10 133 8 135 1.82e-28 104
MS.gene62868.t1 AT4G28530 42.537 134 54 4 5 119 8 137 3.81e-27 103
MS.gene62868.t1 AT2G18060 78.947 57 12 0 88 144 2 58 4.57e-27 102
MS.gene62868.t1 AT3G44350 38.931 131 71 5 10 134 8 135 4.68e-27 99.4
MS.gene62868.t1 AT3G44350 38.931 131 71 5 10 134 8 135 1.60e-26 100
MS.gene62868.t1 AT4G01520 37.594 133 77 4 8 135 5 136 2.89e-26 100
MS.gene62868.t1 AT1G02230 45.802 131 62 6 8 133 4 130 3.14e-26 101
MS.gene62868.t1 AT3G04420 42.188 128 71 3 8 133 4 130 1.55e-25 98.6
MS.gene62868.t1 AT5G64530 41.985 131 59 4 7 135 3 118 2.25e-25 94.7
MS.gene62868.t1 AT3G04420 42.188 128 71 3 8 133 4 130 2.83e-25 98.6
MS.gene62868.t1 AT4G01550 40.769 130 72 3 10 135 7 135 2.98e-25 99.8
MS.gene62868.t1 AT4G01540 38.168 131 75 4 10 135 7 136 4.40e-25 99.0
MS.gene62868.t1 AT4G01540 38.168 131 75 4 10 135 7 136 5.35e-25 99.0
MS.gene62868.t1 AT1G02250 45.038 131 63 5 8 133 4 130 5.35e-25 98.2
MS.gene62868.t1 AT4G01540 38.168 131 75 4 10 135 7 136 5.88e-25 99.0
MS.gene62868.t1 AT4G01540 38.168 131 75 4 10 135 7 136 6.81e-25 99.0
MS.gene62868.t1 AT5G64530 42.424 132 59 5 6 135 2 118 8.81e-25 94.0
MS.gene62868.t1 AT1G02220 40.310 129 71 4 7 133 3 127 6.81e-21 87.4
MS.gene62868.t1 AT3G10490 58.065 62 23 1 83 141 2 63 1.21e-19 83.6
MS.gene62868.t1 AT3G10490 58.065 62 23 1 83 141 2 63 1.21e-19 83.6
MS.gene62868.t1 AT1G01010 37.037 135 70 6 10 133 6 136 1.94e-19 83.6
MS.gene62868.t1 AT3G56530 33.835 133 84 2 8 138 53 183 3.32e-19 82.0
MS.gene62868.t1 AT5G50820 35.570 149 70 7 1 139 10 142 7.92e-19 79.0
MS.gene62868.t1 AT2G43000 51.515 66 32 0 72 137 2 67 3.26e-18 77.4
MS.gene62868.t1 AT5G14000 29.771 131 85 2 7 135 15 140 2.82e-15 68.9
MS.gene62868.t1 AT3G55210 30.070 143 85 4 7 136 11 151 1.39e-14 68.9
MS.gene62868.t1 AT5G14000 29.197 137 90 2 1 135 9 140 1.52e-14 67.8
MS.gene62868.t1 AT5G22290 53.333 45 21 0 89 133 2 46 2.52e-13 65.1
MS.gene62868.t1 AT3G04430 34.074 135 72 6 13 134 6 136 1.64e-12 62.4
MS.gene62868.t1 AT5G18300 35.075 134 70 7 11 140 18 138 2.22e-11 58.2

Find 28 sgRNAs with CRISPR-Local

Find 35 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATACTCAAAACAATTTC+TGG 0.230974 8.1:+21991785 MS.gene62868:CDS
CAAACAGAATTATGCAAAAT+AGG 0.259681 8.1:+21991642 MS.gene62868:intron
CAATCAGATTTCTGTCCATT+TGG 0.277247 8.1:-21991849 None:intergenic
GAGCAACAAAAGCAGGATTC+TGG 0.295790 8.1:+21991739 MS.gene62868:CDS
AATCAGATTTCTGTCCATTT+GGG 0.310097 8.1:-21991848 None:intergenic
CGTCTTGAAACTAATCAAAA+TGG 0.327333 8.1:+21991888 MS.gene62868:CDS
ACTCAAAACAATTTCTGGTT+GGG 0.418569 8.1:+21991790 MS.gene62868:CDS
CTATTCGTTCTAGTTCCTGT+TGG 0.449896 8.1:-21991717 None:intergenic
TACTCAAAACAATTTCTGGT+TGG 0.456891 8.1:+21991789 MS.gene62868:CDS
TAATCAAAATGGAATTTCTC+AGG 0.470538 8.1:+21991899 MS.gene62868:CDS
AAAGATAAGAAGTATCCAAC+AGG 0.484211 8.1:+21991702 MS.gene62868:CDS
TACAAAGGACGTGCCCCAAA+TGG 0.485596 8.1:+21991834 MS.gene62868:CDS
ACGAATAGAGCAACAAAAGC+AGG 0.489114 8.1:+21991732 MS.gene62868:CDS
ATTGAACCATGGGATCTTCA+AGG 0.495896 8.1:+21991374 MS.gene62868:CDS
TCAACAAGTTCTTCATCAGT+TGG 0.499544 8.1:-21991278 None:intergenic
AACTTGTTGATTACTACCTC+AGG 0.500136 8.1:+21991291 MS.gene62868:CDS
CAAATGGACAGAAATCTGAT+TGG 0.510953 8.1:+21991850 MS.gene62868:CDS
GTTGGATGAAAACGAAAGCC+TGG 0.518219 8.1:-21991260 None:intergenic
TATTGCTTTGTCTCTTCCTG+TGG 0.520396 8.1:-21991766 None:intergenic
TCTCTATAAAATTGAACCAT+GGG 0.531197 8.1:+21991364 MS.gene62868:CDS
TGATTACTACCTCAGGAAGA+AGG 0.532222 8.1:+21991298 MS.gene62868:CDS
ATCTCTATAAAATTGAACCA+TGG 0.552588 8.1:+21991363 MS.gene62868:CDS
ATCAGATTTCTGTCCATTTG+GGG 0.575645 8.1:-21991847 None:intergenic
GAAGTGATGAACAAAATGAC+TGG 0.576909 8.1:+21991664 MS.gene62868:CDS
GCAGGATTCTGGAAAGCCAC+AGG 0.582522 8.1:+21991750 MS.gene62868:CDS
TCGATACCTTGAAGATCCCA+TGG 0.613286 8.1:-21991380 None:intergenic
TAGACGATACCTTCTTCCTG+AGG 0.649052 8.1:-21991307 None:intergenic
GGATGAAAACGAAAGCCTGG+AGG 0.739180 8.1:-21991257 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAACAAAAAATTATACT+AGG + chr8.1:21991463-21991482 MS.gene62868:intron 15.0%
!!! AAAAAAATTCTGAGATAATA+TGG - chr8.1:21991441-21991460 None:intergenic 15.0%
!! AATATACTCAAAACAATTTC+TGG + chr8.1:21991785-21991804 MS.gene62868:CDS 20.0%
!!! ATAATATGGATTGATTGTTA+AGG - chr8.1:21991427-21991446 None:intergenic 20.0%
! ATCTCTATAAAATTGAACCA+TGG + chr8.1:21991363-21991382 MS.gene62868:CDS 25.0%
! CAAACAGAATTATGCAAAAT+AGG + chr8.1:21991642-21991661 MS.gene62868:intron 25.0%
! TCTCTATAAAATTGAACCAT+GGG + chr8.1:21991364-21991383 MS.gene62868:CDS 25.0%
!! AAAATTATACTAGGAGTACA+AGG + chr8.1:21991472-21991491 MS.gene62868:intron 25.0%
!! AAGACTCTAGTATTTTACAA+AGG + chr8.1:21991819-21991838 MS.gene62868:CDS 25.0%
AATCAGATTTCTGTCCATTT+GGG - chr8.1:21991851-21991870 None:intergenic 30.0%
CGTCTTGAAACTAATCAAAA+TGG + chr8.1:21991888-21991907 MS.gene62868:CDS 30.0%
!! AAAGATAAGAAGTATCCAAC+AGG + chr8.1:21991702-21991721 MS.gene62868:CDS 30.0%
!! ACTCAAAACAATTTCTGGTT+GGG + chr8.1:21991790-21991809 MS.gene62868:CDS 30.0%
!! GATAACACAACATTTGCTAT+TGG + chr8.1:21991609-21991628 MS.gene62868:intron 30.0%
!! TACTCAAAACAATTTCTGGT+TGG + chr8.1:21991789-21991808 MS.gene62868:CDS 30.0%
ATCAGATTTCTGTCCATTTG+GGG - chr8.1:21991850-21991869 None:intergenic 35.0%
CAAATGGACAGAAATCTGAT+TGG + chr8.1:21991850-21991869 MS.gene62868:CDS 35.0%
CAATCAGATTTCTGTCCATT+TGG - chr8.1:21991852-21991871 None:intergenic 35.0%
GAAGTGATGAACAAAATGAC+TGG + chr8.1:21991664-21991683 MS.gene62868:CDS 35.0%
TCAACAAGTTCTTCATCAGT+TGG - chr8.1:21991281-21991300 None:intergenic 35.0%
!! AACTTGTTGATTACTACCTC+AGG + chr8.1:21991291-21991310 MS.gene62868:CDS 35.0%
ACGAATAGAGCAACAAAAGC+AGG + chr8.1:21991732-21991751 MS.gene62868:CDS 40.0%
ATTGAACCATGGGATCTTCA+AGG + chr8.1:21991374-21991393 MS.gene62868:CDS 40.0%
TATTGCTTTGTCTCTTCCTG+TGG - chr8.1:21991769-21991788 None:intergenic 40.0%
TGATTACTACCTCAGGAAGA+AGG + chr8.1:21991298-21991317 MS.gene62868:CDS 40.0%
! ACATTTTCACATGTACCTCC+AGG + chr8.1:21991242-21991261 MS.gene62868:CDS 40.0%
! TACTAGGAGTACAAGGAGTA+CGG + chr8.1:21991479-21991498 MS.gene62868:intron 40.0%
!! CTATTCGTTCTAGTTCCTGT+TGG - chr8.1:21991720-21991739 None:intergenic 40.0%
GAGCAACAAAAGCAGGATTC+TGG + chr8.1:21991739-21991758 MS.gene62868:CDS 45.0%
GTTGGATGAAAACGAAAGCC+TGG - chr8.1:21991263-21991282 None:intergenic 45.0%
TAGACGATACCTTCTTCCTG+AGG - chr8.1:21991310-21991329 None:intergenic 45.0%
TCGATACCTTGAAGATCCCA+TGG - chr8.1:21991383-21991402 None:intergenic 45.0%
GGATGAAAACGAAAGCCTGG+AGG - chr8.1:21991260-21991279 None:intergenic 50.0%
TACAAAGGACGTGCCCCAAA+TGG + chr8.1:21991834-21991853 MS.gene62868:CDS 50.0%
! GCAGGATTCTGGAAAGCCAC+AGG + chr8.1:21991750-21991769 MS.gene62868:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 21991236 21991920 21991236 ID=MS.gene62868
chr8.1 mRNA 21991236 21991920 21991236 ID=MS.gene62868.t1;Parent=MS.gene62868
chr8.1 exon 21991236 21991395 21991236 ID=MS.gene62868.t1.exon1;Parent=MS.gene62868.t1
chr8.1 CDS 21991236 21991395 21991236 ID=cds.MS.gene62868.t1;Parent=MS.gene62868.t1
chr8.1 exon 21991649 21991920 21991649 ID=MS.gene62868.t1.exon2;Parent=MS.gene62868.t1
chr8.1 CDS 21991649 21991920 21991649 ID=cds.MS.gene62868.t1;Parent=MS.gene62868.t1
Gene Sequence

>MS.gene62868

ATGAATACATTTTCACATGTACCTCCAGGCTTTCGTTTTCATCCAACTGATGAAGAACTTGTTGATTACTACCTCAGGAAGAAGGTATCGTCTAAAAAGATTGATCTCGATGTCATCAAAGACGTTGATCTCTATAAAATTGAACCATGGGATCTTCAAGGTATCGATTCGACTTCTATACTGCAAAGCCTTAACAATCAATCCATATTATCTCAGAATTTTTTTTATGAAAACAAAAAATTATACTAGGAGTACAAGGAGTACGGTATTAAACGTAACAATAAATTTTTTTTACTCTTAACTTATTAAAATTTGACAATACATTCGTATAATATGAACAAATATATATGTATCATAGAGTATTACTATTTATGATAACACAACATTTGCTATTGGTGATGTATTGCAAACAGAATTATGCAAAATAGGAAGTGATGAACAAAATGACTGGTATTTCTTTAGTCATAAAGATAAGAAGTATCCAACAGGAACTAGAACGAATAGAGCAACAAAAGCAGGATTCTGGAAAGCCACAGGAAGAGACAAAGCAATATACTCAAAACAATTTCTGGTTGGGATGAGAAAGACTCTAGTATTTTACAAAGGACGTGCCCCAAATGGACAGAAATCTGATTGGATCATGCATGAGTATCGTCTTGAAACTAATCAAAATGGAATTTCTCAG
Protein sequence

>MS.gene62868.t1

MNTFSHVPPGFRFHPTDEELVDYYLRKKVSSKKIDLDVIKDVDLYKIEPWDLQELCKIGSDEQNDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKQFLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNQNGISQ