AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63087

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63087.t1 MTR_8g062350 91.626 203 15 2 1 201 1 203 1.86e-133 372
MS.gene63087.t1 MTR_5g036670 39.286 196 82 2 4 199 33 191 8.72e-38 139
MS.gene63087.t1 MTR_6g008970 41.206 199 75 4 2 199 54 211 1.65e-37 138
MS.gene63087.t1 MTR_8g062700 38.660 194 82 2 6 199 34 190 5.65e-35 130
MS.gene63087.t1 MTR_8g062700 38.660 194 82 2 6 199 34 190 6.10e-35 130
MS.gene63087.t1 MTR_6g008995 38.021 192 80 2 8 199 31 183 5.84e-34 125
MS.gene63087.t1 MTR_6g008995 35.976 164 66 2 36 199 2 126 5.14e-25 100
MS.gene63087.t1 MTR_7g013410 29.121 182 87 3 18 199 2 141 2.51e-21 85.9
MS.gene63087.t1 MTR_1g105960 47.561 82 42 1 15 96 2 82 2.46e-18 77.0
MS.gene63087.t1 MTR_1g105955 51.389 72 35 0 7 78 9 80 6.00e-18 78.2
MS.gene63087.t1 MTR_1g105955 48.571 70 36 0 13 82 94 163 2.69e-12 62.8
MS.gene63087.t1 MTR_3g006105 43.119 109 55 3 8 109 2 110 1.16e-16 74.7
MS.gene63087.t1 MTR_3g006105 42.391 92 51 2 5 94 90 181 3.70e-12 62.8
MS.gene63087.t1 MTR_3g006125 49.383 81 40 1 5 84 171 251 2.28e-16 75.5
MS.gene63087.t1 MTR_3g006125 50.649 77 37 1 8 83 83 159 5.44e-15 71.6
MS.gene63087.t1 MTR_3g006185 33.503 197 89 6 8 199 2 161 1.22e-15 71.6
MS.gene63087.t1 MTR_3g006185 45.556 90 41 2 7 95 91 173 2.64e-15 70.9
MS.gene63087.t1 MTR_3g006150 50.000 74 36 1 7 79 83 156 1.30e-15 71.2
MS.gene63087.t1 MTR_3g006150 31.633 196 86 7 8 199 2 153 7.20e-12 61.2
MS.gene63087.t1 MTR_1g104940 41.573 89 52 0 1 89 1 89 3.91e-15 68.9
MS.gene63087.t1 MTR_1g104960 38.636 88 54 0 5 92 90 177 4.21e-15 70.5
MS.gene63087.t1 MTR_1g104960 38.372 86 53 0 13 98 12 97 4.71e-12 62.4
MS.gene63087.t1 MTR_3g006065 48.649 74 37 1 7 79 83 156 9.46e-15 69.7
MS.gene63087.t1 MTR_3g006065 41.573 89 48 2 8 95 2 87 6.53e-11 59.3
MS.gene63087.t1 MTR_1g105010 36.364 110 67 2 6 113 8 116 1.31e-13 65.1
MS.gene63087.t1 MTR_4g133300 45.946 74 40 0 8 81 83 156 1.49e-13 67.4
MS.gene63087.t1 MTR_4g133300 45.455 77 40 1 7 83 167 241 6.99e-12 62.8
MS.gene63087.t1 MTR_4g133300 45.000 80 41 1 13 92 11 87 9.23e-12 62.4
MS.gene63087.t1 MTR_4g133470 43.243 74 42 0 8 81 83 156 4.51e-12 63.5
MS.gene63087.t1 MTR_4g133470 28.272 191 83 4 13 199 11 151 5.51e-12 63.2
MS.gene63087.t1 MTR_4g133470 44.156 77 41 1 7 83 167 241 3.70e-11 60.8
MS.gene63087.t1 MTR_2g097830 42.500 80 43 1 13 92 69 145 1.96e-11 60.5
MS.gene63087.t1 MTR_1g091047 44.776 67 36 1 13 78 8 74 3.35e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63087.t1 AT1G24190 39.691 194 80 2 6 199 6 162 1.90e-36 135
MS.gene63087.t1 AT1G24190 39.196 199 84 2 1 199 1 162 2.71e-36 134
MS.gene63087.t1 AT1G24190 39.196 199 84 2 1 199 1 162 2.76e-36 134
MS.gene63087.t1 AT1G70060 38.191 199 87 2 1 199 1 163 1.44e-35 132
MS.gene63087.t1 AT1G70060 38.191 199 87 2 1 199 1 163 1.44e-35 132
MS.gene63087.t1 AT3G01320 37.629 194 83 1 7 200 50 205 2.31e-35 132
MS.gene63087.t1 AT3G01320 37.629 194 83 1 7 200 50 205 2.53e-35 132
MS.gene63087.t1 AT5G15020 36.979 192 82 3 8 199 46 198 6.16e-32 122
MS.gene63087.t1 AT5G15020 36.979 192 82 3 8 199 46 198 7.26e-32 122
MS.gene63087.t1 AT1G59890 36.559 186 79 2 14 199 45 191 2.37e-31 120
MS.gene63087.t1 AT1G59890 36.559 186 79 2 14 199 45 191 2.42e-31 120
MS.gene63087.t1 AT1G59890 36.559 186 79 2 14 199 45 191 2.52e-31 120
MS.gene63087.t1 AT1G59890 36.559 186 79 2 14 199 45 191 2.69e-31 120
MS.gene63087.t1 AT1G70030 33.505 194 90 2 6 199 3 157 1.66e-28 105
MS.gene63087.t1 AT1G10450 34.574 188 84 1 14 201 84 232 2.24e-28 112
MS.gene63087.t1 AT1G10450 34.574 188 84 1 14 201 33 181 2.73e-28 111
MS.gene63087.t1 AT1G10450 34.574 188 84 1 14 201 33 181 2.73e-28 111
MS.gene63087.t1 AT1G24200 34.826 201 91 3 1 201 1 161 1.88e-26 100
MS.gene63087.t1 AT5G15025 51.899 79 38 0 10 88 43 121 6.86e-21 84.3
MS.gene63087.t1 AT1G70030 43.529 85 48 0 3 87 11 95 3.08e-18 77.4
MS.gene63087.t1 AT1G70030 43.529 85 48 0 3 87 11 95 4.13e-18 77.4
MS.gene63087.t1 AT1G27260 31.163 215 111 6 15 195 4 215 8.48e-18 78.6
MS.gene63087.t1 AT5G15040 45.946 74 40 0 17 90 6 79 7.92e-17 72.4
MS.gene63087.t1 AT5G15040 45.946 74 40 0 17 90 6 79 7.92e-17 72.4
MS.gene63087.t1 AT5G15040 45.946 74 40 0 17 90 6 79 7.92e-17 72.4
MS.gene63087.t1 AT1G27220 44.444 81 44 1 3 82 2 82 1.82e-16 74.3
MS.gene63087.t1 AT4G12020 44.944 89 48 1 10 98 304 391 2.94e-16 77.0
MS.gene63087.t1 AT4G12020 44.944 89 48 1 10 98 237 324 1.54e-15 74.7
MS.gene63087.t1 AT4G12020 44.944 89 48 1 10 98 304 391 1.58e-15 74.7
MS.gene63087.t1 AT4G12020 44.944 89 48 1 10 98 304 391 1.58e-15 74.7
MS.gene63087.t1 AT4G12020 44.944 89 48 1 10 98 304 391 1.58e-15 74.7
MS.gene63087.t1 AT4G12020 44.944 89 48 1 10 98 304 391 1.60e-15 74.7
MS.gene63087.t1 AT4G12020 44.944 89 48 1 10 98 304 391 1.60e-15 74.7
MS.gene63087.t1 AT4G12020 44.944 89 48 1 10 98 304 391 1.65e-15 74.7
MS.gene63087.t1 AT4G12020 44.944 89 48 1 10 98 304 391 1.67e-15 74.7
MS.gene63087.t1 AT4G12020 44.944 89 48 1 10 98 304 391 1.70e-15 74.7
MS.gene63087.t1 AT4G12020 44.944 89 48 1 10 98 304 391 1.75e-15 74.7
MS.gene63087.t1 AT1G27250 41.250 80 46 1 3 81 9 88 3.48e-15 69.7
MS.gene63087.t1 AT5G35610 31.429 175 90 4 6 180 2 146 6.29e-14 66.6
MS.gene63087.t1 AT1G24210 26.316 190 81 3 10 198 10 141 6.36e-14 66.6
MS.gene63087.t1 AT1G23810 42.188 64 37 0 11 74 106 169 6.58e-11 60.1

Find 39 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTCATCTTCTTCTGAAAT+TGG 0.145375 8.1:-42814523 None:intergenic
TCTTTAGGCTGCTGCACTTT+TGG 0.231309 8.1:+42818272 MS.gene63087:intron
GTTCATCTTCTTCTGAAATT+GGG 0.296314 8.1:-42814522 None:intergenic
TCACATTCATCAAGATTCCT+AGG 0.400109 8.1:-42814550 None:intergenic
TGATGCCTTTGCATATCTTA+AGG 0.401654 8.1:+42814051 MS.gene63087:CDS
GAGGTGAAGGAGTTGTTTAA+AGG 0.403782 8.1:+42814445 MS.gene63087:CDS
ACAAACTCATTAGCATGTTC+AGG 0.410073 8.1:-42814682 None:intergenic
TGAAGGATTACAAAGATAAC+AGG 0.410405 8.1:+42814131 MS.gene63087:CDS
AGGACATAATGATCTGATTA+CGG 0.410966 8.1:+42814465 MS.gene63087:CDS
CCAAATGGTTCATTCCTTGA+TGG 0.420352 8.1:-42814655 None:intergenic
TCATGAACATGCTGATAGAT+AGG 0.425133 8.1:+42818089 MS.gene63087:CDS
AACATGCTAATGAGTTTGTC+AGG 0.450168 8.1:+42814686 MS.gene63087:CDS
GGACATAATGATCTGATTAC+GGG 0.453739 8.1:+42814466 MS.gene63087:CDS
CACATTCATCAAGATTCCTA+GGG 0.482045 8.1:-42814549 None:intergenic
CCATCAAGGAATGAACCATT+TGG 0.482429 8.1:+42814655 MS.gene63087:CDS
CAATCTCCTCAGATGATGCT+TGG 0.483286 8.1:+42814613 MS.gene63087:CDS
TGAGTTTGTCAGGAAAGTTA+AGG 0.495626 8.1:+42814696 MS.gene63087:CDS
GCATGTTCAGGTCCACCAAA+TGG 0.497913 8.1:-42814670 None:intergenic
ATATGCAAAGGCATCATCTT+CGG 0.504699 8.1:-42814044 None:intergenic
TTTCCGCAGACTCGGTATGA+AGG 0.534877 8.1:+42818034 MS.gene63087:intron
TGCATATCTTAAGGCAGTCA+AGG 0.563220 8.1:+42814060 MS.gene63087:CDS
AGCATATCACAACTCCATCA+AGG 0.566686 8.1:+42814641 MS.gene63087:CDS
ATGTGAAATGACAATTCCAT+TGG 0.573688 8.1:+42814567 MS.gene63087:CDS
TCAAGGAATGAACCATTTGG+TGG 0.574249 8.1:+42814658 MS.gene63087:CDS
TTACATAGAGACTTACTATG+AGG 0.579989 8.1:+42818120 MS.gene63087:CDS
TGAGGAGATTGTGCATTGAG+AGG 0.583914 8.1:-42814601 None:intergenic
TAATTACCATGACGTTGTAA+CGG 0.588102 8.1:+42814423 MS.gene63087:CDS
TTCAACATCTTTGCACCAAG+TGG 0.595995 8.1:+42814490 MS.gene63087:CDS
TGACGTTGTAACGGAGGTGA+AGG 0.598498 8.1:+42814432 MS.gene63087:CDS
ACTTCCACTTCTTAAACACC+AGG 0.607178 8.1:-42818336 None:intergenic
ACAAAGATGAGTACGAGTCA+AGG 0.614659 8.1:+42814007 None:intergenic
GACTGCCTTAAGATATGCAA+AGG 0.619589 8.1:-42814056 None:intergenic
TCACCTCCGTTACAACGTCA+TGG 0.624638 8.1:-42814429 None:intergenic
ATTGGGATTTGATAACCACT+TGG 0.631213 8.1:-42814505 None:intergenic
TTACCATGACGTTGTAACGG+AGG 0.671678 8.1:+42814426 MS.gene63087:CDS
TCTTCTCCAAGCATCATCTG+AGG 0.679479 8.1:-42814619 None:intergenic
ACATTCATCAAGATTCCTAG+GGG 0.685325 8.1:-42814548 None:intergenic
CATTCATCAAGATTCCTAGG+GGG 0.699372 8.1:-42814547 None:intergenic
AAGATGAGTACGAGTCAAGG+TGG 0.711763 8.1:+42814010 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGCTAAATATTTATTATTT+GGG + chr8.1:42816017-42816036 MS.gene63087:intron 10.0%
!! TGGTAAATTATAAATAATAT+AGG - chr8.1:42814333-42814352 None:intergenic 10.0%
!!! AATATAATTTTTTAATCATG+TGG + chr8.1:42818214-42818233 MS.gene63087:intron 10.0%
!!! TAATTAATAGGAAAATTTTA+TGG - chr8.1:42817835-42817854 None:intergenic 10.0%
!!! TCAAGAATAATATTTTTTTT+GGG + chr8.1:42816070-42816089 MS.gene63087:intron 10.0%
!!! TTATTTCTTATTTTTTAATC+CGG + chr8.1:42817913-42817932 MS.gene63087:intron 10.0%
!!! TTTTATTTTTTCTTTTTAGT+TGG - chr8.1:42815385-42815404 None:intergenic 10.0%
! CGGGGGGGGGGGGGGGGGGG+GGG + chr8.1:42816161-42816180 MS.gene63087:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr8.1:42816162-42816181 MS.gene63087:intron 100.0%
!! AAAAAATATTATTCTTGAGT+TGG - chr8.1:42816068-42816087 None:intergenic 15.0%
!! AAACTTAACATACAATAAAA+CGG + chr8.1:42816141-42816160 MS.gene63087:intron 15.0%
!! AAATCAACCTATTAAATTTA+AGG + chr8.1:42815413-42815432 MS.gene63087:intron 15.0%
!! AATAGAAAAATGTAAATTAC+CGG - chr8.1:42814300-42814319 None:intergenic 15.0%
!! ACTATTACATTGTAAATTTA+TGG + chr8.1:42817241-42817260 MS.gene63087:intron 15.0%
!! ACTTAAAGTAGATATATTAT+AGG + chr8.1:42814941-42814960 MS.gene63087:intron 15.0%
!! ACTTTATCCTTAAATTTAAT+AGG - chr8.1:42815423-42815442 None:intergenic 15.0%
!! ATAGTCATAAACATATTAAA+TGG - chr8.1:42815851-42815870 None:intergenic 15.0%
!! CTATTACATTGTAAATTTAT+GGG + chr8.1:42817242-42817261 MS.gene63087:intron 15.0%
!! GTAGCTAAATATTTATTATT+TGG + chr8.1:42816016-42816035 MS.gene63087:intron 15.0%
!! TAAAAAAATTATTCTACATG+CGG + chr8.1:42816245-42816264 MS.gene63087:intron 15.0%
!! TAGTCATAAACATATTAAAT+GGG - chr8.1:42815850-42815869 None:intergenic 15.0%
!! TATTACATTGTAAATTTATG+GGG + chr8.1:42817243-42817262 MS.gene63087:intron 15.0%
!! TTTATACAATGATAACAAAA+AGG - chr8.1:42816733-42816752 None:intergenic 15.0%
!!! AAATTGAATATTTTTTCTCA+AGG - chr8.1:42815486-42815505 None:intergenic 15.0%
!!! CAAGAATAATATTTTTTTTG+GGG + chr8.1:42816071-42816090 MS.gene63087:intron 15.0%
!!! CTCAAGAATAATATTTTTTT+TGG + chr8.1:42816069-42816088 MS.gene63087:intron 15.0%
!!! TATTTATTTTGTTGATTTCT+AGG + chr8.1:42814398-42814417 MS.gene63087:intron 15.0%
!!! TTACTTTTTGAAAATAATGA+AGG + chr8.1:42814114-42814133 MS.gene63087:CDS 15.0%
!! AAAAAAATTATTCTACATGC+GGG + chr8.1:42816246-42816265 MS.gene63087:intron 20.0%
!! AACTTAACATACAATAAAAC+GGG + chr8.1:42816142-42816161 MS.gene63087:intron 20.0%
!! AATTAGAGACGAAAAAAATT+TGG - chr8.1:42814273-42814292 None:intergenic 20.0%
!! ATATATTGTTGAACTTCTTT+AGG + chr8.1:42818257-42818276 MS.gene63087:intron 20.0%
!! CATCAACAAATGATAAAAAT+TGG + chr8.1:42815695-42815714 MS.gene63087:intron 20.0%
!! CTAAGTTCACAATAATTAAT+AGG - chr8.1:42817847-42817866 None:intergenic 20.0%
!! CTATTAATTATTGTGAACTT+AGG + chr8.1:42817845-42817864 MS.gene63087:intron 20.0%
!! GATATATTATAGGTTTGAAA+AGG + chr8.1:42814951-42814970 MS.gene63087:intron 20.0%
!! TAAAGAAGTTCAACAATATA+TGG - chr8.1:42818258-42818277 None:intergenic 20.0%
!! TAAGCATATGATAAAATTAG+AGG - chr8.1:42816583-42816602 None:intergenic 20.0%
!! TTAAAGTAACCTTCAAATTA+TGG - chr8.1:42817344-42817363 None:intergenic 20.0%
!! TTACTATTATAGTACTCTAT+TGG - chr8.1:42815102-42815121 None:intergenic 20.0%
!! TTCTTTATTAGAAAGAACAA+AGG - chr8.1:42814877-42814896 None:intergenic 20.0%
!!! AAAAAAAGTGTTTTTAGTCT+TGG + chr8.1:42815534-42815553 MS.gene63087:intron 20.0%
!!! AAAAGTATAAACTCTAACTA+AGG - chr8.1:42814749-42814768 None:intergenic 20.0%
!!! AAGATCAAGATCTTATTTAT+TGG + chr8.1:42815004-42815023 MS.gene63087:intron 20.0%
!!! AATAATATTTTTTTTGGGGT+AGG + chr8.1:42816075-42816094 MS.gene63087:intron 20.0%
!!! AGATCAAGATCTTATTTATT+GGG + chr8.1:42815005-42815024 MS.gene63087:intron 20.0%
!!! CTAAGTTAATTTTCATGTAT+TGG - chr8.1:42815673-42815692 None:intergenic 20.0%
!!! GGAAAATACATTATCTATTT+TGG - chr8.1:42815790-42815809 None:intergenic 20.0%
!!! TCCTAAATTTTTTTGTTGTA+GGG - chr8.1:42815567-42815586 None:intergenic 20.0%
! AAGAAGATTTAAGAACAACT+TGG - chr8.1:42816345-42816364 None:intergenic 25.0%
! AATTTAGTATGTCTTGATGA+TGG - chr8.1:42817983-42818002 None:intergenic 25.0%
! ACACATGATGTTTATCTTTA+AGG - chr8.1:42816538-42816557 None:intergenic 25.0%
! ACTACATGTTTCATTTGTAT+TGG - chr8.1:42815941-42815960 None:intergenic 25.0%
! ACTCAAAAAGACATCTATTA+CGG + chr8.1:42816309-42816328 MS.gene63087:intron 25.0%
! ACTTAACATACAATAAAACG+GGG + chr8.1:42816143-42816162 MS.gene63087:intron 25.0%
! AGAAGATTTAAGAACAACTT+GGG - chr8.1:42816344-42816363 None:intergenic 25.0%
! CAATGACTATTTAGAAAAGT+TGG + chr8.1:42815718-42815737 MS.gene63087:intron 25.0%
! CTAAATATTCTTACAAGAGA+GGG - chr8.1:42818189-42818208 None:intergenic 25.0%
! GGAAGAATTGTACTAAATAA+GGG - chr8.1:42816487-42816506 None:intergenic 25.0%
! TATTTATAATTTACCACGAG+AGG + chr8.1:42814337-42814356 MS.gene63087:intron 25.0%
! TCCCTACAACAAAAAAATTT+AGG + chr8.1:42815563-42815582 MS.gene63087:intron 25.0%
! TCGCAAATAAAATTAAGATC+CGG - chr8.1:42814363-42814382 None:intergenic 25.0%
! TCGTTACAAACTTTACATAT+TGG + chr8.1:42816902-42816921 MS.gene63087:intron 25.0%
! TCTAAATATTCTTACAAGAG+AGG - chr8.1:42818190-42818209 None:intergenic 25.0%
! TGATAAAATTAGAGGTAAAG+TGG - chr8.1:42816575-42816594 None:intergenic 25.0%
! TGGAAGAATTGTACTAAATA+AGG - chr8.1:42816488-42816507 None:intergenic 25.0%
! TTATTAGAAAGAACAAAGGT+TGG - chr8.1:42814873-42814892 None:intergenic 25.0%
! TTGAAAAGAAATCTTGCTTA+AGG + chr8.1:42815166-42815185 MS.gene63087:intron 25.0%
! TTTCTTGTAAATAACCGATT+TGG - chr8.1:42815820-42815839 None:intergenic 25.0%
!! ATTTTCCATTGTAACCAAAT+CGG + chr8.1:42815803-42815822 MS.gene63087:intron 25.0%
!! TATAGGTACTATTTTATCGT+TGG + chr8.1:42817562-42817581 MS.gene63087:intron 25.0%
!! TATTTATTATTTGGGATAGC+TGG + chr8.1:42816025-42816044 MS.gene63087:intron 25.0%
!! TTCTCATTCTTAAACTTGTT+TGG + chr8.1:42814773-42814792 MS.gene63087:intron 25.0%
!! TTTTCATTACGACAATGAAT+TGG + chr8.1:42817383-42817402 MS.gene63087:intron 25.0%
!!! AGTCATTAGAATGACTTTTT+TGG - chr8.1:42817809-42817828 None:intergenic 25.0%
!!! ATGTTTCATTTGTATTGGTT+TGG - chr8.1:42815936-42815955 None:intergenic 25.0%
!!! ATTTTGGAAATAGACGATTA+TGG - chr8.1:42815774-42815793 None:intergenic 25.0%
!!! CATTTTTTTGTCCGAAATAT+TGG - chr8.1:42814227-42814246 None:intergenic 25.0%
!!! GAATTGGATGCTTTTTTTAA+GGG + chr8.1:42817399-42817418 MS.gene63087:intron 25.0%
!!! GAGTTAATTATGTTTTTTCC+TGG + chr8.1:42818318-42818337 MS.gene63087:CDS 25.0%
!!! GTCCTAAATTTTTTTGTTGT+AGG - chr8.1:42815568-42815587 None:intergenic 25.0%
!!! TATATTCTCCAAGTTTTAGA+GGG + chr8.1:42817212-42817231 MS.gene63087:intron 25.0%
!!! TGAATTGGATGCTTTTTTTA+AGG + chr8.1:42817398-42817417 MS.gene63087:intron 25.0%
!!! TGTTTATCTTTAAGGTATCA+AGG - chr8.1:42816530-42816549 None:intergenic 25.0%
!!! TTCATGTATTGGCTTATTTT+TGG - chr8.1:42815662-42815681 None:intergenic 25.0%
!!! TTTCTTATTTTTTAATCCGG+AGG + chr8.1:42817916-42817935 MS.gene63087:intron 25.0%
AAATAACAAGACATAGTTCG+TGG - chr8.1:42817893-42817912 None:intergenic 30.0%
AACTCAAACATTCATCTAGT+CGG + chr8.1:42815033-42815052 MS.gene63087:intron 30.0%
AACTTTACATATTGGAGTGT+TGG + chr8.1:42816910-42816929 MS.gene63087:intron 30.0%
AATGGGAAACATTAGGTAAA+TGG - chr8.1:42816417-42816436 None:intergenic 30.0%
ACATGTTTACGATCAAAGAT+AGG + chr8.1:42815237-42815256 MS.gene63087:intron 30.0%
ACCATTATTAGGGAATATCA+AGG + chr8.1:42816689-42816708 MS.gene63087:intron 30.0%
AGGACATAATGATCTGATTA+CGG + chr8.1:42814465-42814484 MS.gene63087:CDS 30.0%
ATAAACCTTAATGCAAATGG+AGG + chr8.1:42817136-42817155 MS.gene63087:intron 30.0%
ATGTGAAATGACAATTCCAT+TGG + chr8.1:42814567-42814586 MS.gene63087:CDS 30.0%
CAATGAAAAAATTTACGCAG+AGG + chr8.1:42815359-42815378 MS.gene63087:intron 30.0%
CTAATAAAGAAGAAGCTACT+GGG + chr8.1:42814886-42814905 MS.gene63087:intron 30.0%
CTTAACATACAATAAAACGG+GGG + chr8.1:42816144-42816163 MS.gene63087:intron 30.0%
GATTACAAAGATAACAGGTT+AGG + chr8.1:42814136-42814155 MS.gene63087:intron 30.0%
GGATATTGAAGATAACATGA+GGG + chr8.1:42816633-42816652 MS.gene63087:intron 30.0%
TAATTACCATGACGTTGTAA+CGG + chr8.1:42814423-42814442 MS.gene63087:CDS 30.0%
TCCTTGATATTCCCTAATAA+TGG - chr8.1:42816693-42816712 None:intergenic 30.0%
TCTAATAAAGAAGAAGCTAC+TGG + chr8.1:42814885-42814904 MS.gene63087:intron 30.0%
TGAAGGATTACAAAGATAAC+AGG + chr8.1:42814131-42814150 MS.gene63087:CDS 30.0%
TGATCGTAAACATGTCTATA+TGG - chr8.1:42815232-42815251 None:intergenic 30.0%
TGCATTAGTTGTACGATATT+CGG + chr8.1:42816772-42816791 MS.gene63087:intron 30.0%
TGCATTGTTCTATTGCTAAT+AGG + chr8.1:42815124-42815143 MS.gene63087:intron 30.0%
TGGATAAACCTTAATGCAAA+TGG + chr8.1:42817133-42817152 MS.gene63087:intron 30.0%
TGGATATTGAAGATAACATG+AGG + chr8.1:42816632-42816651 MS.gene63087:intron 30.0%
TGTTACACTTAAAACAAGGT+AGG + chr8.1:42817651-42817670 MS.gene63087:intron 30.0%
TGTTCTATTGCTAATAGGTT+TGG + chr8.1:42815129-42815148 MS.gene63087:intron 30.0%
TTAACATACAATAAAACGGG+GGG + chr8.1:42816145-42816164 MS.gene63087:intron 30.0%
TTACATAGAGACTTACTATG+AGG + chr8.1:42818120-42818139 MS.gene63087:CDS 30.0%
TTTATCATGAATTCTTCCTC+CGG - chr8.1:42817935-42817954 None:intergenic 30.0%
! AAGAAGGTGTACCATTATTA+GGG + chr8.1:42816679-42816698 MS.gene63087:intron 30.0%
! GATGAATTGATGATACTATG+TGG + chr8.1:42817707-42817726 MS.gene63087:intron 30.0%
! TTGGCAATTGAACTAGTTTA+AGG + chr8.1:42815994-42816013 MS.gene63087:intron 30.0%
! TTTTCGTCTCTAATTAATGC+CGG + chr8.1:42814278-42814297 MS.gene63087:intron 30.0%
!! AAATGGACTATGCTTTCTTT+GGG - chr8.1:42816400-42816419 None:intergenic 30.0%
!! AATAACCGATTTGGTTACAA+TGG - chr8.1:42815811-42815830 None:intergenic 30.0%
!! GTAATAGATGTCTTTTTGAG+TGG - chr8.1:42816310-42816329 None:intergenic 30.0%
!! GTATATTCTCCAAGTTTTAG+AGG + chr8.1:42817211-42817230 MS.gene63087:intron 30.0%
!! GTTCATCTTCTTCTGAAATT+GGG - chr8.1:42814525-42814544 None:intergenic 30.0%
!! TAAATGGACTATGCTTTCTT+TGG - chr8.1:42816401-42816420 None:intergenic 30.0%
!! TGTTCATCTTCTTCTGAAAT+TGG - chr8.1:42814526-42814545 None:intergenic 30.0%
!!! AGAGGTTTTAATTCTTCCAA+TGG - chr8.1:42814586-42814605 None:intergenic 30.0%
!!! AGCTCCATTTTGATTTCATA+GGG + chr8.1:42817316-42817335 MS.gene63087:intron 30.0%
!!! GGACTATTTTTTAGAACTAG+TGG - chr8.1:42816196-42816215 None:intergenic 30.0%
!!! TTTTTTTAAGGGTGCTTCTA+TGG + chr8.1:42817410-42817429 MS.gene63087:intron 30.0%
AACATGCTAATGAGTTTGTC+AGG + chr8.1:42814686-42814705 MS.gene63087:CDS 35.0%
AACCTTAAACCTATGTCATG+AGG - chr8.1:42817291-42817310 None:intergenic 35.0%
AACTTGGCCAAGTATTAACA+CGG + chr8.1:42817031-42817050 MS.gene63087:intron 35.0%
AAGACTTTAATGCACACACA+TGG - chr8.1:42816283-42816302 None:intergenic 35.0%
AAGTATTAACACGGTGCAAT+TGG + chr8.1:42817040-42817059 MS.gene63087:intron 35.0%
AATTGCACCGTGTTAATACT+TGG - chr8.1:42817041-42817060 None:intergenic 35.0%
ACAAACTCATTAGCATGTTC+AGG - chr8.1:42814685-42814704 None:intergenic 35.0%
ACATTCATCAAGATTCCTAG+GGG - chr8.1:42814551-42814570 None:intergenic 35.0%
AGTATTAACACGGTGCAATT+GGG + chr8.1:42817041-42817060 MS.gene63087:intron 35.0%
ATGTCCATCTTGTATTCTTG+GGG + chr8.1:42816216-42816235 MS.gene63087:intron 35.0%
ATGTGATGTGCTTAATGTGT+GGG + chr8.1:42815288-42815307 MS.gene63087:intron 35.0%
CAAGAGTGATTGAAAGAATG+TGG - chr8.1:42814179-42814198 None:intergenic 35.0%
CACATTCATCAAGATTCCTA+GGG - chr8.1:42814552-42814571 None:intergenic 35.0%
CATGCATACTTTGATGTACA+TGG + chr8.1:42816799-42816818 MS.gene63087:intron 35.0%
CATGTCCATCTTGTATTCTT+GGG + chr8.1:42816215-42816234 MS.gene63087:intron 35.0%
CATTGTCACCTTCTTAATGA+AGG - chr8.1:42815061-42815080 None:intergenic 35.0%
CCAATCACTGACCAATATTT+CGG + chr8.1:42814213-42814232 MS.gene63087:intron 35.0%
CTACACTACATAGGACATTA+CGG - chr8.1:42816455-42816474 None:intergenic 35.0%
CTATTGCTAATAGGTTTGGA+AGG + chr8.1:42815133-42815152 MS.gene63087:intron 35.0%
CTTCATTAAGAAGGTGACAA+TGG + chr8.1:42815059-42815078 MS.gene63087:intron 35.0%
GACGTCAATTTCCTTAACTT+AGG - chr8.1:42814841-42814860 None:intergenic 35.0%
GATTGTGGTGGTTTAATTCA+AGG + chr8.1:42817168-42817187 MS.gene63087:intron 35.0%
GCTTTCAAGAAGAATTTGAG+TGG - chr8.1:42816508-42816527 None:intergenic 35.0%
GGACATAATGATCTGATTAC+GGG + chr8.1:42814466-42814485 MS.gene63087:CDS 35.0%
GGTTTAATTCAAGGTTCTCA+TGG + chr8.1:42817177-42817196 MS.gene63087:intron 35.0%
GTAATGTCCTATGTAGTGTA+GGG + chr8.1:42816454-42816473 MS.gene63087:intron 35.0%
TAACATACAATAAAACGGGG+GGG + chr8.1:42816146-42816165 MS.gene63087:intron 35.0%
TAGTAATGCTTGCAACATCT+TGG + chr8.1:42817536-42817555 MS.gene63087:intron 35.0%
TCACATTCATCAAGATTCCT+AGG - chr8.1:42814553-42814572 None:intergenic 35.0%
TCATATGCTTACCATATGCT+AGG + chr8.1:42816592-42816611 MS.gene63087:intron 35.0%
TCATGAACATGCTGATAGAT+AGG + chr8.1:42818089-42818108 MS.gene63087:CDS 35.0%
TCTTAAGTGCTACACTTTGT+GGG + chr8.1:42817627-42817646 MS.gene63087:intron 35.0%
TGAGTTTGTCAGGAAAGTTA+AGG + chr8.1:42814696-42814715 MS.gene63087:CDS 35.0%
TGATGCCTTTGCATATCTTA+AGG + chr8.1:42814051-42814070 MS.gene63087:CDS 35.0%
TTGCAACATCTTGGACTTAT+AGG + chr8.1:42817545-42817564 MS.gene63087:intron 35.0%
TTTAAGAACAACTTGGGCTA+TGG - chr8.1:42816338-42816357 None:intergenic 35.0%
! ATTGGGATTTGATAACCACT+TGG - chr8.1:42814508-42814527 None:intergenic 35.0%
! CTCTATTGGTAGTAGTCTAT+TGG - chr8.1:42815088-42815107 None:intergenic 35.0%
! GAAGAAGGTGTACCATTATT+AGG + chr8.1:42816678-42816697 MS.gene63087:intron 35.0%
! GGGTATCAAGATTAGCTATA+AGG + chr8.1:42814906-42814925 MS.gene63087:intron 35.0%
! TATGTTAAGTTTTCGCACCA+GGG - chr8.1:42816133-42816152 None:intergenic 35.0%
!! AAACTTCTTGTTATTCCTGG+TGG + chr8.1:42816939-42816958 MS.gene63087:intron 35.0%
!! ATATGCAAAGGCATCATCTT+CGG - chr8.1:42814047-42814066 None:intergenic 35.0%
!! CGACTGATGTTTGTTTTTCT+CGG + chr8.1:42816832-42816851 MS.gene63087:intron 35.0%
!! GGAAAACTTCTTGTTATTCC+TGG + chr8.1:42816936-42816955 MS.gene63087:intron 35.0%
!! TTACATATTGGAGTGTTGGT+GGG + chr8.1:42816914-42816933 MS.gene63087:intron 35.0%
!! TTTACATATTGGAGTGTTGG+TGG + chr8.1:42816913-42816932 MS.gene63087:intron 35.0%
!!! AGTCAGGAAACTGACTTTTT+TGG + chr8.1:42817436-42817455 MS.gene63087:intron 35.0%
!!! CATATGCTAGGTGGTTTTAA+GGG + chr8.1:42816604-42816623 MS.gene63087:intron 35.0%
!!! GAGCTCCATTTTGATTTCAT+AGG + chr8.1:42817315-42817334 MS.gene63087:intron 35.0%
!!! TATTTTTTTTGGGGTAGGCA+AGG + chr8.1:42816080-42816099 MS.gene63087:intron 35.0%
!!! TTTTCTCGGCTAGTTTTGAT+GGG + chr8.1:42816846-42816865 MS.gene63087:intron 35.0%
!!! TTTTTCTCGGCTAGTTTTGA+TGG + chr8.1:42816845-42816864 MS.gene63087:intron 35.0%
AAATCACCACCCACAGAAAA+GGG - chr8.1:42817009-42817028 None:intergenic 40.0%
AAATTTATGGGGTGTGCTTG+AGG + chr8.1:42817254-42817273 MS.gene63087:intron 40.0%
AACATACAATAAAACGGGGG+GGG + chr8.1:42816147-42816166 MS.gene63087:intron 40.0%
AAGTTTGGTCACAACATGGA+GGG + chr8.1:42815311-42815330 MS.gene63087:intron 40.0%
AATTTATGGGGTGTGCTTGA+GGG + chr8.1:42817255-42817274 MS.gene63087:intron 40.0%
ACTTTAATGCACACACATGG+AGG - chr8.1:42816280-42816299 None:intergenic 40.0%
AGATAAGCCCTACACTACAT+AGG - chr8.1:42816464-42816483 None:intergenic 40.0%
AGCATATCACAACTCCATCA+AGG + chr8.1:42814641-42814660 MS.gene63087:CDS 40.0%
AGGTTTATCCACCTTCCATA+AGG - chr8.1:42817124-42817143 None:intergenic 40.0%
AGTCGGTACCTTCATTAAGA+AGG + chr8.1:42815050-42815069 MS.gene63087:intron 40.0%
ATAACATGAGGGTCATTCAG+AGG + chr8.1:42816644-42816663 MS.gene63087:intron 40.0%
ATATTTGCTTTCCGCAGACT+CGG + chr8.1:42818026-42818045 MS.gene63087:intron 40.0%
ATCAAGGACGATGCAATTAG+AGG + chr8.1:42816705-42816724 MS.gene63087:intron 40.0%
ATGCCACTGTACAAATAGTG+GGG + chr8.1:42817742-42817761 MS.gene63087:intron 40.0%
CAGAAGCAATGGGAAACATT+AGG - chr8.1:42816424-42816443 None:intergenic 40.0%
CATAGGGCTCCATAATTTGA+AGG + chr8.1:42817332-42817351 MS.gene63087:intron 40.0%
CATGTGATGTGCTTAATGTG+TGG + chr8.1:42815287-42815306 MS.gene63087:intron 40.0%
CATTCATCAAGATTCCTAGG+GGG - chr8.1:42814550-42814569 None:intergenic 40.0%
CCAAATGGTTCATTCCTTGA+TGG - chr8.1:42814658-42814677 None:intergenic 40.0%
CCAAGAATACAAGATGGACA+TGG - chr8.1:42816217-42816236 None:intergenic 40.0%
CCATCAAGGAATGAACCATT+TGG + chr8.1:42814655-42814674 MS.gene63087:CDS 40.0%
CCATGTCCATCTTGTATTCT+TGG + chr8.1:42816214-42816233 MS.gene63087:intron 40.0%
CCGAAATATTGGTCAGTGAT+TGG - chr8.1:42814216-42814235 None:intergenic 40.0%
CCTTAAAACCACCTAGCATA+TGG - chr8.1:42816606-42816625 None:intergenic 40.0%
CGTAATGTCCTATGTAGTGT+AGG + chr8.1:42816453-42816472 MS.gene63087:intron 40.0%
CTGGTGGAGACAAGAAAATA+AGG + chr8.1:42816955-42816974 MS.gene63087:intron 40.0%
CTTAAGTGCTACACTTTGTG+GGG + chr8.1:42817628-42817647 MS.gene63087:intron 40.0%
GAAATCTTGCTTAAGGAGCA+AGG + chr8.1:42815173-42815192 MS.gene63087:intron 40.0%
GACTGCCTTAAGATATGCAA+AGG - chr8.1:42814059-42814078 None:intergenic 40.0%
GAGGTGAAGGAGTTGTTTAA+AGG + chr8.1:42814445-42814464 MS.gene63087:CDS 40.0%
GATGCCACTGTACAAATAGT+GGG + chr8.1:42817741-42817760 MS.gene63087:intron 40.0%
GGAGCCCTATGAAATCAAAA+TGG - chr8.1:42817323-42817342 None:intergenic 40.0%
GTCTTAAGTGCTACACTTTG+TGG + chr8.1:42817626-42817645 MS.gene63087:intron 40.0%
GTGGGTGGTGATTTATAACT+TGG + chr8.1:42817015-42817034 MS.gene63087:intron 40.0%
GTGTAGCCCTTCATATAGAT+GGG - chr8.1:42816110-42816129 None:intergenic 40.0%
TAAATCACCACCCACAGAAA+AGG - chr8.1:42817010-42817029 None:intergenic 40.0%
TAGAGCCTCCATTTGCATTA+AGG - chr8.1:42817144-42817163 None:intergenic 40.0%
TATAATTTACCACGAGAGGC+CGG + chr8.1:42814341-42814360 MS.gene63087:intron 40.0%
TATGCTTACCATATGCTAGG+TGG + chr8.1:42816595-42816614 MS.gene63087:intron 40.0%
TCAAGGAATGAACCATTTGG+TGG + chr8.1:42814658-42814677 MS.gene63087:CDS 40.0%
TGATGCCACTGTACAAATAG+TGG + chr8.1:42817740-42817759 MS.gene63087:intron 40.0%
TGCATATCTTAAGGCAGTCA+AGG + chr8.1:42814060-42814079 MS.gene63087:CDS 40.0%
TGCCTCATGACATAGGTTTA+AGG + chr8.1:42817286-42817305 MS.gene63087:intron 40.0%
TGCTTAATGTGTGGGAAGTT+TGG + chr8.1:42815296-42815315 MS.gene63087:intron 40.0%
TGTAGCCCTTCATATAGATG+GGG - chr8.1:42816109-42816128 None:intergenic 40.0%
TTCAACATCTTTGCACCAAG+TGG + chr8.1:42814490-42814509 MS.gene63087:CDS 40.0%
TTCAAGGTTCTCATGGTCAA+TGG + chr8.1:42817184-42817203 MS.gene63087:intron 40.0%
TTCCTTAACTTAGGTCCCTA+AGG - chr8.1:42814832-42814851 None:intergenic 40.0%
TTGTCTTTGCCTCATGACAT+AGG + chr8.1:42817279-42817298 MS.gene63087:intron 40.0%
! ATGTTAAGTTTTCGCACCAG+GGG - chr8.1:42816132-42816151 None:intergenic 40.0%
! ATTCTACATCCCCTTTTCTG+TGG + chr8.1:42816996-42817015 MS.gene63087:intron 40.0%
! ATTTTCCTAAGTCACCCACT+GGG + chr8.1:42814800-42814819 MS.gene63087:intron 40.0%
! GACTATGCTTTCTTTGGGAA+GGG - chr8.1:42816395-42816414 None:intergenic 40.0%
! GGACGTTTTCAGAGAACAAA+TGG + chr8.1:42814081-42814100 MS.gene63087:CDS 40.0%
! GGGGTGTTACACTTAAAACA+AGG + chr8.1:42817647-42817666 MS.gene63087:intron 40.0%
! GTATGTTAAGTTTTCGCACC+AGG - chr8.1:42816134-42816153 None:intergenic 40.0%
! TGACATAGGTTTAAGGTTCG+TGG + chr8.1:42817293-42817312 MS.gene63087:intron 40.0%
! TTCTACATCCCCTTTTCTGT+GGG + chr8.1:42816997-42817016 MS.gene63087:intron 40.0%
!! CCATATGCTAGGTGGTTTTA+AGG + chr8.1:42816603-42816622 MS.gene63087:intron 40.0%
!! CTTATTTTCTTGTCTCCACC+AGG - chr8.1:42816957-42816976 None:intergenic 40.0%
!! TACATATTGGAGTGTTGGTG+GGG + chr8.1:42816915-42816934 MS.gene63087:intron 40.0%
AAGAAGATGAACAACCCCCT+AGG + chr8.1:42814533-42814552 MS.gene63087:CDS 45.0%
AATCACCACCCACAGAAAAG+GGG - chr8.1:42817008-42817027 None:intergenic 45.0%
ACATACAATAAAACGGGGGG+GGG + chr8.1:42816148-42816167 MS.gene63087:intron 45.0%
ACTGCCCCAAGAATACAAGA+TGG - chr8.1:42816223-42816242 None:intergenic 45.0%
AGGCTACCCCATCTATATGA+AGG + chr8.1:42816100-42816119 MS.gene63087:intron 45.0%
ATTGGTTGGAGGAAGCCTTA+TGG + chr8.1:42817106-42817125 MS.gene63087:intron 45.0%
CAAGACATAGTTCGTGGACT+CGG - chr8.1:42817887-42817906 None:intergenic 45.0%
CAATCTCCTCAGATGATGCT+TGG + chr8.1:42814613-42814632 MS.gene63087:CDS 45.0%
CACCTTAGGGACCTAAGTTA+AGG + chr8.1:42814827-42814846 MS.gene63087:intron 45.0%
CCAATGAAACCCTGAACTCT+AGG - chr8.1:42817091-42817110 None:intergenic 45.0%
CCTAGAGTTCAGGGTTTCAT+TGG + chr8.1:42817088-42817107 MS.gene63087:intron 45.0%
GAAACTGTGCCTAGAGTTCA+GGG + chr8.1:42817079-42817098 MS.gene63087:intron 45.0%
GAAGTTTGGTCACAACATGG+AGG + chr8.1:42815310-42815329 MS.gene63087:intron 45.0%
GAGAGGGAAGAGTCATTGAA+AGG - chr8.1:42818173-42818192 None:intergenic 45.0%
GAGGTTTCTTGTGACGAAGA+AGG + chr8.1:42816663-42816682 MS.gene63087:intron 45.0%
GAGTTCAGGGTTTCATTGGT+TGG + chr8.1:42817092-42817111 MS.gene63087:intron 45.0%
GGCTACCCCATCTATATGAA+GGG + chr8.1:42816101-42816120 MS.gene63087:intron 45.0%
GGTGAAGCTTCAGAAGCAAT+GGG - chr8.1:42816434-42816453 None:intergenic 45.0%
GGTGTAGCCCTTCATATAGA+TGG - chr8.1:42816111-42816130 None:intergenic 45.0%
TCTTCTCCAAGCATCATCTG+AGG - chr8.1:42814622-42814641 None:intergenic 45.0%
TGAGGAGATTGTGCATTGAG+AGG - chr8.1:42814604-42814623 None:intergenic 45.0%
TGGGAAGTTTGGTCACAACA+TGG + chr8.1:42815307-42815326 MS.gene63087:intron 45.0%
TTACCATGACGTTGTAACGG+AGG + chr8.1:42814426-42814445 MS.gene63087:CDS 45.0%
! AATTGGGTTGCACCAAAAGG+TGG + chr8.1:42817057-42817076 MS.gene63087:intron 45.0%
! CATTTTCCTAAGTCACCCAC+TGG + chr8.1:42814799-42814818 MS.gene63087:intron 45.0%
! GGACTATGCTTTCTTTGGGA+AGG - chr8.1:42816396-42816415 None:intergenic 45.0%
! TAGGCACAGTTTCCACCTTT+TGG - chr8.1:42817072-42817091 None:intergenic 45.0%
! TCTTTAGGCTGCTGCACTTT+TGG + chr8.1:42818272-42818291 MS.gene63087:intron 45.0%
! TGCAATTGGGTTGCACCAAA+AGG + chr8.1:42817054-42817073 MS.gene63087:intron 45.0%
! TTCAGGGTTTCATTGGTTGG+AGG + chr8.1:42817095-42817114 MS.gene63087:intron 45.0%
! TTTTCCTAAGTCACCCACTG+GGG + chr8.1:42814801-42814820 MS.gene63087:intron 45.0%
!! AGGCTCTAAAACGATTGTGG+TGG + chr8.1:42817156-42817175 MS.gene63087:intron 45.0%
!! GGCAAATATGCTCGCTTTTG+TGG + chr8.1:42815194-42815213 MS.gene63087:intron 45.0%
!! GTTGCACACCCTCTAAAACT+TGG - chr8.1:42817223-42817242 None:intergenic 45.0%
!! TGGAGGCTCTAAAACGATTG+TGG + chr8.1:42817153-42817172 MS.gene63087:intron 45.0%
!!! ATTATATTTATGTTAATTTT+TGG + chr8.1:42815975-42815994 MS.gene63087:intron 5.0%
!!! CTTATAAATTATAATTTTTT+AGG + chr8.1:42815454-42815473 MS.gene63087:intron 5.0%
AATTAAGATCCGGCCTCTCG+TGG - chr8.1:42814353-42814372 None:intergenic 50.0%
ATACAATAAAACGGGGGGGG+GGG + chr8.1:42816150-42816169 MS.gene63087:intron 50.0%
CATACAATAAAACGGGGGGG+GGG + chr8.1:42816149-42816168 MS.gene63087:intron 50.0%
CGGTGAAGCTTCAGAAGCAA+TGG - chr8.1:42816435-42816454 None:intergenic 50.0%
GCACCCCACTATTTGTACAG+TGG - chr8.1:42817748-42817767 None:intergenic 50.0%
GCATGTTCAGGTCCACCAAA+TGG - chr8.1:42814673-42814692 None:intergenic 50.0%
GGAAACTGTGCCTAGAGTTC+AGG + chr8.1:42817078-42817097 MS.gene63087:intron 50.0%
TATATGAAGGGCTACACCCC+TGG + chr8.1:42816113-42816132 MS.gene63087:intron 50.0%
TCACCTCCGTTACAACGTCA+TGG - chr8.1:42814432-42814451 None:intergenic 50.0%
TCACCTTCATACCGAGTCTG+CGG - chr8.1:42818040-42818059 None:intergenic 50.0%
TTTCCTAAGTCACCCACTGG+GGG + chr8.1:42814802-42814821 MS.gene63087:intron 50.0%
! GTTGGAGGAAGCCTTATGGA+AGG + chr8.1:42817110-42817129 MS.gene63087:intron 50.0%
! TACATCCCCTTTTCTGTGGG+TGG + chr8.1:42817000-42817019 MS.gene63087:intron 50.0%
! TAGGCTGCTGCACTTTTGGA+GGG + chr8.1:42818276-42818295 MS.gene63087:intron 50.0%
! TGACGTTGTAACGGAGGTGA+AGG + chr8.1:42814432-42814451 MS.gene63087:CDS 50.0%
! TTAGGCTGCTGCACTTTTGG+AGG + chr8.1:42818275-42818294 MS.gene63087:intron 50.0%
! TTTCCGCAGACTCGGTATGA+AGG + chr8.1:42818034-42818053 MS.gene63087:intron 50.0%
!!! AGGTGGTTTTAAGGGCGAGA+TGG + chr8.1:42816612-42816631 MS.gene63087:intron 50.0%
!!! CTCGGCTAGTTTTGATGGGT+AGG + chr8.1:42816850-42816869 MS.gene63087:intron 50.0%
GGTGCTTCTATGGTGCAGTC+AGG + chr8.1:42817420-42817439 MS.gene63087:intron 55.0%
TACAATAAAACGGGGGGGGG+GGG + chr8.1:42816151-42816170 MS.gene63087:intron 55.0%
! GGAGGAAGCCTTATGGAAGG+TGG + chr8.1:42817113-42817132 MS.gene63087:intron 55.0%
ACAATAAAACGGGGGGGGGG+GGG + chr8.1:42816152-42816171 MS.gene63087:intron 60.0%
CCCTAAGGTGTACCCCCAGT+GGG - chr8.1:42814817-42814836 None:intergenic 60.0%
GTACCCCCAGTGGGTGACTT+AGG - chr8.1:42814808-42814827 None:intergenic 60.0%
TCCCTAAGGTGTACCCCCAG+TGG - chr8.1:42814818-42814837 None:intergenic 60.0%
! ACCCACTGGGGGTACACCTT+AGG + chr8.1:42814813-42814832 MS.gene63087:intron 60.0%
! CCCACTGGGGGTACACCTTA+GGG + chr8.1:42814814-42814833 MS.gene63087:intron 60.0%
AATAAAACGGGGGGGGGGGG+GGG + chr8.1:42816154-42816173 MS.gene63087:intron 65.0%
CAATAAAACGGGGGGGGGGG+GGG + chr8.1:42816153-42816172 MS.gene63087:intron 65.0%
ATAAAACGGGGGGGGGGGGG+GGG + chr8.1:42816155-42816174 MS.gene63087:intron 70.0%
TAAAACGGGGGGGGGGGGGG+GGG + chr8.1:42816156-42816175 MS.gene63087:intron 75.0%
! AAAACGGGGGGGGGGGGGGG+GGG + chr8.1:42816157-42816176 MS.gene63087:intron 80.0%
! AAACGGGGGGGGGGGGGGGG+GGG + chr8.1:42816158-42816177 MS.gene63087:intron 85.0%
! AACGGGGGGGGGGGGGGGGG+GGG + chr8.1:42816159-42816178 MS.gene63087:intron 90.0%
! ACGGGGGGGGGGGGGGGGGG+GGG + chr8.1:42816160-42816179 MS.gene63087:intron 95.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 42814013 42818347 42814013 ID=MS.gene63087
chr8.1 mRNA 42814013 42818347 42814013 ID=MS.gene63087.t1;Parent=MS.gene63087
chr8.1 exon 42814013 42814152 42814013 ID=MS.gene63087.t1.exon1;Parent=MS.gene63087.t1
chr8.1 CDS 42814013 42814152 42814013 ID=cds.MS.gene63087.t1;Parent=MS.gene63087.t1
chr8.1 exon 42814420 42814717 42814420 ID=MS.gene63087.t1.exon2;Parent=MS.gene63087.t1
chr8.1 CDS 42814420 42814717 42814420 ID=cds.MS.gene63087.t1;Parent=MS.gene63087.t1
chr8.1 exon 42818043 42818141 42818043 ID=MS.gene63087.t1.exon3;Parent=MS.gene63087.t1
chr8.1 CDS 42818043 42818141 42818043 ID=cds.MS.gene63087.t1;Parent=MS.gene63087.t1
chr8.1 exon 42818279 42818347 42818279 ID=MS.gene63087.t1.exon4;Parent=MS.gene63087.t1
chr8.1 CDS 42818279 42818347 42818279 ID=cds.MS.gene63087.t1;Parent=MS.gene63087.t1
Gene Sequence

>MS.gene63087

ATGAGTACGAGTCAAGGTGGTAAGAAACTAACCGAAGATGATGCCTTTGCATATCTTAAGGCAGTCAAGGACGTTTTCAGAGAACAAATGGAAAACTATTCTTACTTTTTGAAAATAATGAAGGATTACAAAGATAACAGGTTAGGTCATATGTTCACTTGTTCCACATTCTTTCAATCACTCTTGTTACTTCAAAATTTCCAATCACTGACCAATATTTCGGACAAAAAAATGAGTAAAATAAATGCAAATTTAAACCAAATTTTTTTCGTCTCTAATTAATGCCGGTAATTTACATTTTTCTATTTGTGCAATTTCCTATATTATTTATAATTTACCACGAGAGGCCGGATCTTAATTTTATTTGCGAAAATTGACTTGAATATATTTATTTTGTTGATTTCTAGGATTAATTACCATGACGTTGTAACGGAGGTGAAGGAGTTGTTTAAAGGACATAATGATCTGATTACGGGATTCAACATCTTTGCACCAAGTGGTTATCAAATCCCAATTTCAGAAGAAGATGAACAACCCCCTAGGAATCTTGATGAATGTGAAATGACAATTCCATTGGAAGAATTAAAACCTCTCAATGCACAATCTCCTCAGATGATGCTTGGAGAAGAGCATATCACAACTCCATCAAGGAATGAACCATTTGGTGGACCTGAACATGCTAATGAGTTTGTCAGGAAAGTTAAGGTAATTTTTTATAAACAAATGAGTTACACCTTAGTTAGAGTTTATACTTTTAGTCTTCTCATTCTTAAACTTGTTTGGTTACATTTTCCTAAGTCACCCACTGGGGGTACACCTTAGGGACCTAAGTTAAGGAAATTGACGTCACTTATTATCCAACCTTTGTTCTTTCTAATAAAGAAGAAGCTACTGGGTATCAAGATTAGCTATAAGGCTCTAAAGACTCACTTAAAGTAGATATATTATAGGTTTGAAAAGGTGTTATTAATATTATTGATCTTAGTAATGTAAGATCAAGATCTTATTTATTGGGAGTAGAACTCAAACATTCATCTAGTCGGTACCTTCATTAAGAAGGTGACAATGGATACCAATAGACTACTACCAATAGAGTACTATAATAGTAAAATGCATTGTTCTATTGCTAATAGGTTTGGAAGGAGAGTGAATGTTGAAAAGAAATCTTGCTTAAGGAGCAAGGCAAATATGCTCGCTTTTGTGGATGTTGATCTTACCATATAGACATGTTTACGATCAAAGATAGGAACTATATATTATAGTGATACAATCTTCATGTGATGTGCTTAATGTGTGGGAAGTTTGGTCACAACATGGAGGGTTATTTAGTGAAAGAGAGTGCGAAGCAATGAAAAAATTTACGCAGAGGCCAACTAAAAAGAAAAAATAAAATATTTTTAAAATCAACCTATTAAATTTAAGGATAAAGTATGTTCTTAGTCTTATAAATTATAATTTTTTAGGTATTGTCCTTGAGAAAAAATATTCAATTTTTGTCTTGATTTTTTAAAATTTTACAAAAAAAAAAGTGTTTTTAGTCTTGGATTTAATCCCTACAACAAAAAAATTTAGGACTAAAATTAAACAAAATCTTAAAAACTTAACTTAACAATCGCAAATGTTGTAGTGATTAAAAACAAAATAATCCAAAAATAAGCCAATACATGAAAATTAACTTAGAGCATCAACAAATGATAAAAATTGGCAATGACTATTTAGAAAAGTTGGACAAAATGTGTTTCAAGAAGTCAATTTTATCCATAATCGTCTATTTCCAAAATAGATAATGTATTTTCCATTGTAACCAAATCGGTTATTTACAAGAAACTCATTGCCCATTTAATATGTTTATGACTATTGTCTTGATAAGTTTTATCGTTGAAAAAGTTTTCTCTATAGTTGTCATTGAGACATGAAATACCAAACCAATACAAATGAAACATGTAGTAATCTTTTTACTTTATTATATTTATGTTAATTTTTGGCAATTGAACTAGTTTAAGGTAGCTAAATATTTATTATTTGGGATAGCTGGATATAAATAGATACAAACCAACTCAAGAATAATATTTTTTTTGGGGTAGGCAAGGCTACCCCATCTATATGAAGGGCTACACCCCTGGTGCGAAAACTTAACATACAATAAAACGGGGGGGGGGGGGGGGGGGGGGGGGGGGTAACCACTAGTTCTAAAAAATAGTCCATGTCCATCTTGTATTCTTGGGGCAGTTCTAAAAAAATTATTCTACATGCGGGTGTGTCTGCCTCCATGTGTGTGCATTAAAGTCTTTTGTCCACTCAAAAAGACATCTATTACGGTTTCCATAGCCCAAGTTGTTCTTAAATCTTCTTACAAACTGATTGAGAATTCATAGTATACCCTTCCCAAAGAAAGCATAGTCCATTTACCTAATGTTTCCCATTGCTTCTGAAGCTTCACCGTAATGTCCTATGTAGTGTAGGGCTTATCTCCCTTATTTAGTACAATTCTTCCACTCAAATTCTTCTTGAAAGCCTTGATACCTTAAAGATAAACATCATGTGTGATCTAAATACAAACCACTTTACCTCTAATTTTATCATATGCTTACCATATGCTAGGTGGTTTTAAGGGCGAGATGGATATTGAAGATAACATGAGGGTCATTCAGAGGTTTCTTGTGACGAAGAAGGTGTACCATTATTAGGGAATATCAAGGACGATGCAATTAGAGGATCCTTTTTGTTATCATTGTATAAAAGTTGTTGAGTTTTTGCTTTGCATTAGTTGTACGATATTCGGTGTGCATGCATACTTTGATGTACATGGTTCATGTTAACGACTGATGTTTGTTTTTCTCGGCTAGTTTTGATGGGTAGGTTAATTTCTAATATATAAAAATGAAGTCATCGTTACAAACTTTACATATTGGAGTGTTGGTGGGGAAAACTTCTTGTTATTCCTGGTGGAGACAAGAAAATAAGGAAGCGTGTTCTAATTTATATTCTACATCCCCTTTTCTGTGGGTGGTGATTTATAACTTGGCCAAGTATTAACACGGTGCAATTGGGTTGCACCAAAAGGTGGAAACTGTGCCTAGAGTTCAGGGTTTCATTGGTTGGAGGAAGCCTTATGGAAGGTGGATAAACCTTAATGCAAATGGAGGCTCTAAAACGATTGTGGTGGTTTAATTCAAGGTTCTCATGGTCAATGGTTGTGTATATTCTCCAAGTTTTAGAGGGTGTGCAACTATTACATTGTAAATTTATGGGGTGTGCTTGAGGGCTTGTCTTTGCCTCATGACATAGGTTTAAGGTTCGTGGAGCTCCATTTTGATTTCATAGGGCTCCATAATTTGAAGGTTACTTTAATTAATTGATATGCAAATGTTTTTCATTACGACAATGAATTGGATGCTTTTTTTAAGGGTGCTTCTATGGTGCAGTCAGGAAACTGACTTTTTTGGAAAAGTTAATTTTGATCTTAATGTTTGATTCATTTTTAAATTGTTGATTACTGATTAATGATCAATAGTAATTTATCTAGTAATGCTTGCAACATCTTGGACTTATAGGTACTATTTTATCGTTGGCATCTTTAACATGCAAACAGAGTTGATGATATTATGTGATAGTCTTAAGTGCTACACTTTGTGGGGTGTTACACTTAAAACAAGGTAGGATAAAATTAGATTAAGTGTAGTCTTGTTAATCTGATGAATTGATGATACTATGTGGATTGAACTTTTGATGCCACTGTACAAATAGTGGGGTGCTACTCACTATATTTTTTGATATTATAGTGTTAACTTCACCAAAAAAGTCATTCTAATGACTTCACCATAAAATTTTCCTATTAATTATTGTGAACTTAGGTAAAACTTATTTATATCCGAGTCCACGAACTATGTCTTGTTATTTTTATTTCTTATTTTTTAATCCGGAGGAAGAATTCATGATAAAATTATATTGAAGCACTGATGTTATACCATCATCAAGACATACTAAATTTTTCTCTTGAGTATAATCATTGAATATTTGCTTTCCGCAGACTCGGTATGAAGGTGATCGTCATGTTTTCAAGTCATTTCTTTACATCATGAACATGCTGATAGATAGGAAAAAGACTTACATAGAGACTTACTATGAGGTAGATTCAACTTTTTTACTATTAAAGTCCTTTCAATGACTCTTCCCTCTCTTGTAAGAATATTTAGATAATAATATAATTTTTTAATCATGTGGTTTAGACATTCATTCTAACCATATATTGTTGAACTTCTTTAGGCTGCTGCACTTTTGGAGGGTCACACAGATCTTCAAGATGAGTTAATTATGTTTTTTCCTGGTGTTTAA
Protein sequence

>MS.gene63087.t1

MSTSQGGKKLTEDDAFAYLKAVKDVFREQMENYSYFLKIMKDYKDNRINYHDVVTEVKELFKGHNDLITGFNIFAPSGYQIPISEEDEQPPRNLDECEMTIPLEELKPLNAQSPQMMLGEEHITTPSRNEPFGGPEHANEFVRKVKTRYEGDRHVFKSFLYIMNMLIDRKKTYIETYYEAAALLEGHTDLQDELIMFFPGV