AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63096

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63096.t1 MTR_8g062240 95.439 285 6 2 1 285 1 278 0.0 546
MS.gene63096.t1 MTR_5g037250 70.507 217 44 6 75 285 37 239 1.70e-95 281
MS.gene63096.t1 MTR_7g053410 53.659 205 73 6 84 276 234 428 6.78e-53 180
MS.gene63096.t1 MTR_7g053410 53.659 205 73 6 84 276 234 428 8.86e-53 180
MS.gene63096.t1 MTR_8g012290 52.747 182 74 4 84 256 212 390 3.43e-50 172
MS.gene63096.t1 MTR_8g012290 52.747 182 74 4 84 256 212 390 3.88e-50 172
MS.gene63096.t1 MTR_5g048860 71.053 114 31 1 134 247 343 454 1.61e-46 164
MS.gene63096.t1 MTR_8g065740 53.529 170 69 4 79 247 234 394 3.89e-46 161
MS.gene63096.t1 MTR_4g070320 55.484 155 53 2 110 251 85 236 4.40e-46 158
MS.gene63096.t1 MTR_1g017350 38.591 298 126 10 5 257 74 359 1.28e-45 159
MS.gene63096.t1 MTR_1g017350 38.591 298 126 10 5 257 74 359 1.62e-45 159
MS.gene63096.t1 MTR_1g017350 39.085 284 116 10 5 243 74 345 3.23e-45 158
MS.gene63096.t1 MTR_1g017350 39.085 284 116 10 5 243 74 345 4.84e-45 157
MS.gene63096.t1 MTR_3g116770 59.310 145 46 4 122 254 149 292 5.36e-44 154
MS.gene63096.t1 MTR_3g116770 59.310 145 46 4 122 254 149 292 5.89e-44 154
MS.gene63096.t1 MTR_3g498825 76.923 91 21 0 139 229 128 218 1.07e-40 144
MS.gene63096.t1 MTR_8g099880 88.000 75 9 0 155 229 142 216 4.82e-40 142
MS.gene63096.t1 MTR_7g092510 72.093 86 24 0 152 237 167 252 2.14e-37 135
MS.gene63096.t1 MTR_1g059270 66.667 90 30 0 155 244 157 246 2.92e-37 132
MS.gene63096.t1 MTR_1g059270 69.412 85 26 0 155 239 157 241 5.68e-36 131
MS.gene63096.t1 MTR_6g084120 45.000 140 51 4 99 238 113 226 1.95e-25 102
MS.gene63096.t1 MTR_4g131160 64.384 73 25 1 151 223 189 260 1.75e-21 93.6
MS.gene63096.t1 MTR_4g131160 64.384 73 25 1 151 223 192 263 1.99e-21 93.2
MS.gene63096.t1 MTR_1g080890 57.500 80 27 2 144 223 185 257 7.24e-20 88.6
MS.gene63096.t1 MTR_4g107320 57.692 78 25 4 176 245 60 137 5.46e-17 76.3
MS.gene63096.t1 MTR_1g069155 47.561 82 41 2 160 241 319 398 3.75e-15 75.5
MS.gene63096.t1 MTR_1g084980 50.000 64 31 1 160 223 464 526 5.38e-15 75.5
MS.gene63096.t1 MTR_2g098310 36.986 146 75 5 88 222 257 396 2.13e-14 73.2
MS.gene63096.t1 MTR_4g065870 55.385 65 29 0 158 222 355 419 2.16e-14 73.2
MS.gene63096.t1 MTR_2g098310 51.515 66 32 0 156 221 330 395 1.03e-13 71.2
MS.gene63096.t1 MTR_4g065870 54.839 62 28 0 158 219 355 416 1.21e-13 70.9
MS.gene63096.t1 MTR_1g052470 50.746 67 33 0 158 224 298 364 2.32e-13 70.1
MS.gene63096.t1 MTR_7g099540 50.000 64 31 1 160 223 254 316 3.34e-13 69.7
MS.gene63096.t1 MTR_4g033295 49.231 65 33 0 158 222 118 182 4.55e-13 67.0
MS.gene63096.t1 MTR_1g070870 53.750 80 30 2 144 223 112 184 4.92e-13 68.2
MS.gene63096.t1 MTR_1g070870 53.750 80 30 2 144 223 115 187 5.31e-13 68.2
MS.gene63096.t1 MTR_7g092540 44.595 74 41 0 158 231 243 316 6.59e-13 68.2
MS.gene63096.t1 MTR_4g033295 47.761 67 34 1 158 223 118 184 7.51e-13 65.9
MS.gene63096.t1 MTR_7g092540 48.438 64 33 0 158 221 243 306 1.57e-12 67.0
MS.gene63096.t1 MTR_1g018090 49.231 65 32 1 158 222 274 337 2.61e-12 66.6
MS.gene63096.t1 MTR_1g019240 44.615 65 35 1 160 224 87 150 4.46e-12 65.1
MS.gene63096.t1 MTR_3g103030 34.109 129 71 4 107 222 165 292 8.25e-12 65.1
MS.gene63096.t1 MTR_8g036235 47.692 65 34 0 158 222 316 380 1.03e-11 65.1
MS.gene63096.t1 MTR_5g005110 50.000 64 31 1 159 222 225 287 1.40e-11 64.3
MS.gene63096.t1 MTR_7g099540 46.875 64 33 1 160 223 254 316 1.60e-11 64.7
MS.gene63096.t1 MTR_7g111320 48.438 64 32 1 160 223 434 496 2.26e-11 64.3
MS.gene63096.t1 MTR_3g449770 46.875 64 33 1 160 223 311 373 3.10e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63096.t1 AT1G59640 58.703 293 84 12 1 285 1 264 3.14e-96 284
MS.gene63096.t1 AT1G59640 57.600 250 70 11 1 243 1 221 5.40e-75 233
MS.gene63096.t1 AT5G62610 51.525 295 119 12 1 285 1 281 6.29e-71 220
MS.gene63096.t1 AT5G62610 51.525 295 119 12 1 285 1 281 6.29e-71 220
MS.gene63096.t1 AT3G07340 57.055 163 42 3 84 243 206 343 1.43e-49 170
MS.gene63096.t1 AT3G07340 57.055 163 42 3 84 243 206 343 2.77e-49 169
MS.gene63096.t1 AT5G48560 77.451 102 19 3 143 243 289 387 7.32e-46 160
MS.gene63096.t1 AT5G48560 77.451 102 19 3 143 243 289 387 1.23e-45 160
MS.gene63096.t1 AT1G26260 55.063 158 65 2 92 248 110 262 6.49e-45 155
MS.gene63096.t1 AT1G26260 55.063 158 65 2 92 248 139 291 1.21e-44 155
MS.gene63096.t1 AT1G68920 75.510 98 24 0 149 246 293 390 2.15e-44 157
MS.gene63096.t1 AT1G68920 75.510 98 24 0 149 246 294 391 2.18e-44 157
MS.gene63096.t1 AT1G68920 75.510 98 24 0 149 246 294 391 2.18e-44 157
MS.gene63096.t1 AT1G68920 75.510 98 24 0 149 246 294 391 2.18e-44 157
MS.gene63096.t1 AT1G26260 55.063 158 65 2 92 248 161 313 2.25e-44 155
MS.gene63096.t1 AT1G26260 55.063 158 65 2 92 248 161 313 2.25e-44 155
MS.gene63096.t1 AT1G26260 55.063 158 65 2 92 248 161 313 2.25e-44 155
MS.gene63096.t1 AT1G26260 55.063 158 65 2 92 248 161 313 2.25e-44 155
MS.gene63096.t1 AT3G23690 60.993 141 34 5 97 232 141 265 2.02e-43 152
MS.gene63096.t1 AT5G50915 56.115 139 49 3 93 229 79 207 2.53e-42 146
MS.gene63096.t1 AT5G50915 56.115 139 49 3 93 229 79 207 2.53e-42 146
MS.gene63096.t1 AT1G10120 69.388 98 30 0 149 246 197 294 2.85e-42 149
MS.gene63096.t1 AT1G10120 69.388 98 30 0 149 246 197 294 2.85e-42 149
MS.gene63096.t1 AT5G50915 56.522 138 48 3 93 228 79 206 4.37e-42 146
MS.gene63096.t1 AT5G50915 56.522 138 48 3 93 228 79 206 4.37e-42 146
MS.gene63096.t1 AT4G36540 52.055 146 68 1 101 244 82 227 8.16e-41 143
MS.gene63096.t1 AT2G18300 72.043 93 26 0 152 244 179 271 1.29e-40 144
MS.gene63096.t1 AT4G34530 82.500 80 14 0 152 231 166 245 1.51e-40 144
MS.gene63096.t1 AT4G36540 52.778 144 66 1 101 242 82 225 2.45e-40 142
MS.gene63096.t1 AT2G18300 72.043 93 26 0 152 244 179 271 2.72e-40 144
MS.gene63096.t1 AT2G18300 73.626 91 24 0 152 242 179 269 3.83e-40 142
MS.gene63096.t1 AT2G42300 69.318 88 27 0 152 239 179 266 3.00e-38 136
MS.gene63096.t1 AT3G57800 68.085 94 30 0 152 245 198 291 8.97e-38 137
MS.gene63096.t1 AT2G42300 65.957 94 32 0 152 245 179 272 1.19e-37 135
MS.gene63096.t1 AT1G25330 48.507 134 60 2 115 246 66 192 3.78e-34 124
MS.gene63096.t1 AT1G18400 74.667 75 19 0 156 230 143 217 8.48e-34 123
MS.gene63096.t1 AT1G18400 74.667 75 19 0 156 230 143 217 1.35e-33 123
MS.gene63096.t1 AT1G73830 69.512 82 25 0 157 238 146 227 2.55e-33 122
MS.gene63096.t1 AT1G73830 69.512 82 25 0 157 238 146 227 2.72e-33 122
MS.gene63096.t1 AT3G57800 45.390 141 30 1 152 245 198 338 6.81e-29 114
MS.gene63096.t1 AT2G24260 63.014 73 26 1 151 223 28 99 1.92e-22 93.6
MS.gene63096.t1 AT2G24260 63.014 73 26 1 151 223 131 202 1.34e-21 93.2
MS.gene63096.t1 AT4G30980 49.057 106 42 2 118 223 101 194 4.92e-21 91.3
MS.gene63096.t1 AT5G58010 68.182 66 20 1 158 223 99 163 8.72e-21 90.1
MS.gene63096.t1 AT4G30980 68.182 66 20 1 158 223 178 242 8.72e-21 91.3
MS.gene63096.t1 AT2G42300 78.723 47 10 0 152 198 179 225 2.91e-19 84.7
MS.gene63096.t1 AT2G42300 78.723 47 10 0 152 198 179 225 2.91e-19 84.7
MS.gene63096.t1 AT2G42300 80.435 46 9 0 152 197 179 224 3.91e-19 84.3
MS.gene63096.t1 AT2G20180 51.562 64 30 1 160 223 209 271 5.65e-15 74.7
MS.gene63096.t1 AT2G20180 51.562 64 30 1 160 223 209 271 5.65e-15 74.7
MS.gene63096.t1 AT2G20180 51.562 64 30 1 160 223 209 271 5.65e-15 74.7
MS.gene63096.t1 AT2G20180 51.562 64 30 1 160 223 280 342 6.98e-15 74.7
MS.gene63096.t1 AT2G20180 51.562 64 30 1 160 223 280 342 6.98e-15 74.7
MS.gene63096.t1 AT2G20180 51.562 64 30 1 160 223 280 342 6.98e-15 74.7
MS.gene63096.t1 AT2G20180 51.562 64 30 1 160 223 280 342 6.98e-15 74.7
MS.gene63096.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.02e-15 74.7
MS.gene63096.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.02e-15 74.7
MS.gene63096.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.02e-15 74.7
MS.gene63096.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.02e-15 74.7
MS.gene63096.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.02e-15 74.7
MS.gene63096.t1 AT1G09530 50.000 64 31 1 160 223 339 401 8.02e-15 74.7
MS.gene63096.t1 AT4G02590 48.544 103 47 3 126 223 46 147 1.22e-14 72.4
MS.gene63096.t1 AT4G02590 48.544 103 47 3 126 223 109 210 1.78e-14 72.8
MS.gene63096.t1 AT4G02590 48.544 103 47 3 126 223 109 210 1.78e-14 72.8
MS.gene63096.t1 AT1G03040 48.544 103 47 3 126 223 107 208 4.54e-14 71.6
MS.gene63096.t1 AT1G03040 48.544 103 47 3 126 223 107 208 5.32e-14 71.6
MS.gene63096.t1 AT4G28800 44.000 75 41 1 161 235 252 325 1.41e-13 70.9
MS.gene63096.t1 AT2G20180 50.820 61 29 1 160 220 280 339 3.44e-13 69.3
MS.gene63096.t1 AT2G42280 50.000 64 32 0 158 221 279 342 4.23e-13 68.9
MS.gene63096.t1 AT1G51140 53.125 64 30 0 158 221 304 367 4.34e-13 69.3
MS.gene63096.t1 AT4G28815 51.724 58 27 1 161 218 71 127 4.49e-13 67.8
MS.gene63096.t1 AT1G03040 54.217 83 35 2 143 223 122 203 5.14e-13 68.2
MS.gene63096.t1 AT4G09180 46.269 67 36 0 156 222 182 248 7.67e-13 67.4
MS.gene63096.t1 AT2G42280 51.515 66 30 1 158 221 279 344 8.52e-13 68.2
MS.gene63096.t1 AT4G28800 45.833 72 37 2 161 231 264 334 1.15e-12 68.2
MS.gene63096.t1 AT4G28815 51.724 58 27 1 161 218 147 203 1.45e-12 67.0
MS.gene63096.t1 AT4G28790 35.200 125 61 5 160 280 273 381 1.46e-12 67.8
MS.gene63096.t1 AT2G46970 43.836 73 35 2 156 223 216 287 2.23e-12 67.0
MS.gene63096.t1 AT2G46970 43.836 73 35 2 156 223 185 256 2.63e-12 67.0
MS.gene63096.t1 AT2G46970 43.836 73 35 2 156 223 194 265 2.66e-12 67.0
MS.gene63096.t1 AT1G35460 46.154 65 35 0 158 222 181 245 5.43e-12 65.1
MS.gene63096.t1 AT4G33880 49.231 65 32 1 158 222 266 329 6.53e-12 65.5
MS.gene63096.t1 AT4G00050 47.692 65 33 1 158 222 105 168 1.27e-11 64.3
MS.gene63096.t1 AT4G00050 47.692 65 33 1 158 222 207 270 2.09e-11 64.3
MS.gene63096.t1 AT2G14760 49.231 65 32 1 158 222 237 300 2.21e-11 63.9
MS.gene63096.t1 AT1G27740 49.231 65 32 1 158 222 167 230 2.38e-11 63.2
MS.gene63096.t1 AT4G00050 47.692 65 33 1 158 222 207 270 2.48e-11 63.9
MS.gene63096.t1 AT4G36930 47.541 61 31 1 164 224 197 256 8.17e-11 62.4

Find 98 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTTCAATTTAGGTTAT+TGG 0.179282 8.1:+42958317 MS.gene63096:intron
TGTTTAACACTTACATCTTT+TGG 0.232272 8.1:-42958572 None:intergenic
GCGGAGGTGGATTGGGATTA+AGG 0.250601 8.1:+42956617 MS.gene63096:CDS
TTTCTTCAATTTAGGTTATT+GGG 0.256415 8.1:+42958318 MS.gene63096:intron
CAGTTTCCAGCGGCGATTAA+TGG 0.284846 8.1:+42956592 MS.gene63096:CDS
CCGCAGTTTGGTAACGGTTT+AGG 0.285659 8.1:+42956643 MS.gene63096:CDS
TTTAGTTCCTGGTTGTAATA+AGG 0.288451 8.1:+42958124 MS.gene63096:CDS
GGCATTGGCACCGCCATTAC+TGG 0.323699 8.1:-42956803 None:intergenic
ATTCTACAGGATTTAGTTCC+TGG 0.338943 8.1:+42958113 MS.gene63096:CDS
TTAGGACAGTTTGGTGAGTT+TGG 0.345423 8.1:+42956661 MS.gene63096:CDS
CGTTTAGTTTAGCGGAGATC+TGG 0.375505 8.1:+42956569 MS.gene63096:CDS
CAACAAACGTTTGATCTTGC+CGG 0.377074 8.1:+42959144 MS.gene63096:CDS
AAGCAGTAAGCCACCTCCTT+TGG 0.378629 8.1:+42957658 MS.gene63096:CDS
AATGGCGGCGGAGGTGGATT+GGG 0.378673 8.1:+42956610 MS.gene63096:CDS
ACCTGCATATGTAACCATTC+TGG 0.392490 8.1:-42959216 None:intergenic
AGTTTGGACCCGGTTTGAAC+CGG 0.394572 8.1:+42956677 MS.gene63096:CDS
CCCTCGTTCATCATCGCTCC+TGG 0.400423 8.1:-42956514 None:intergenic
ACATCCATGTTCGAGCTAGA+AGG 0.403285 8.1:+42957699 MS.gene63096:CDS
TGGACAATAAACAGGCTAGA+AGG 0.405648 8.1:+42958066 MS.gene63096:intron
CAGATCTCCGCTAAACTAAA+CGG 0.416576 8.1:-42956568 None:intergenic
GTTGAAGGAGAAGTCAGTTC+AGG 0.418689 8.1:+42957620 MS.gene63096:CDS
TAATGGCGGCGGAGGTGGAT+TGG 0.422484 8.1:+42956609 MS.gene63096:CDS
GCGATTAATGGCGGCGGAGG+TGG 0.426598 8.1:+42956604 MS.gene63096:CDS
ATTACCATCCCGGTTCAAAC+CGG 0.435247 8.1:-42956686 None:intergenic
CAGTTTGGTGAGTTTGGACC+CGG 0.446797 8.1:+42956667 MS.gene63096:CDS
GGAAAACGGACTAAAGCATC+AGG 0.450766 8.1:+42957569 MS.gene63096:CDS
CTTGTAGCTTGTGAAACAAA+TGG 0.451137 8.1:-42959171 None:intergenic
TACGACGCCGTTTAGTTTAG+CGG 0.455033 8.1:+42956561 MS.gene63096:CDS
TGAAAGGATGAAAATTCTAC+AGG 0.461627 8.1:+42958100 MS.gene63096:CDS
TAGTGAACCGAAATGGATCC+AGG 0.464407 8.1:+42956496 None:intergenic
GTCGTATTTCCATTCCCATT+CGG 0.470342 8.1:-42956544 None:intergenic
GGCGGTGATGGTAAAGTTGA+AGG 0.472669 8.1:+42957605 MS.gene63096:CDS
CATCCATGTTCGAGCTAGAA+GGG 0.474849 8.1:+42957700 MS.gene63096:CDS
GGTTCATTTCCGAATGGGAA+TGG 0.479304 8.1:+42956535 MS.gene63096:CDS
ACCAGAATGGTTACATATGC+AGG 0.483200 8.1:+42959215 MS.gene63096:CDS
GGTAACGGTTTAGGACAGTT+TGG 0.484684 8.1:+42956652 MS.gene63096:CDS
GGATTAAGGAGGCCGCAGTT+TGG 0.490559 8.1:+42956631 MS.gene63096:CDS
AACCATGGTGGTGTTGGTGG+TGG 0.493213 8.1:+42956733 MS.gene63096:CDS
ACATGGATGTAATCTTGCTT+AGG 0.502301 8.1:-42957686 None:intergenic
ACGAGGGTTCATTTCCGAAT+GGG 0.502721 8.1:+42956530 MS.gene63096:CDS
CCGCCGCCATTAATCGCCGC+TGG 0.503828 8.1:-42956598 None:intergenic
TTGAACCATGGTGGTGTTGG+TGG 0.507286 8.1:+42956730 MS.gene63096:CDS
GCGGCGATTAATGGCGGCGG+AGG 0.511591 8.1:+42956601 MS.gene63096:CDS
GCAGAGGTTCTTCACCAGAA+TGG 0.515410 8.1:+42959202 MS.gene63096:CDS
TGGATGTAATCTTGCTTAGG+AGG 0.520256 8.1:-42957683 None:intergenic
TGGAGGAAAGGCTTCAATGC+CGG 0.520377 8.1:-42958552 None:intergenic
AACAAGACTGAGGGCGGTGA+TGG 0.524946 8.1:+42957593 MS.gene63096:CDS
GTTTGGACCCGGTTTGAACC+GGG 0.528926 8.1:+42956678 MS.gene63096:CDS
TTAGGTTATTGGGAAAGCAT+TGG 0.529281 8.1:+42958328 MS.gene63096:intron
GGTTTGAACCGGGATGGTAA+TGG 0.532358 8.1:+42956688 MS.gene63096:CDS
TCTGGTGAAGAACCTCTGCT+TGG 0.539168 8.1:-42959198 None:intergenic
AAGTGTGTTTCCACCAGTAA+TGG 0.540169 8.1:+42956790 MS.gene63096:CDS
GGACAATAAACAGGCTAGAA+GGG 0.544423 8.1:+42958067 MS.gene63096:intron
AGGAGGCCGCAGTTTGGTAA+CGG 0.546654 8.1:+42956637 MS.gene63096:CDS
CCAGCGGCGATTAATGGCGG+CGG 0.557594 8.1:+42956598 MS.gene63096:CDS
ACTCCGGTCCATTACCATCC+CGG 0.557819 8.1:-42956696 None:intergenic
TTACATATGCAGGTAGGTGG+TGG 0.558363 8.1:+42959225 MS.gene63096:CDS
AGAATGATAGTGATGGAAAA+CGG 0.563521 8.1:+42957555 MS.gene63096:intron
AACGAGGGTTCATTTCCGAA+TGG 0.564078 8.1:+42956529 MS.gene63096:CDS
TTGTGAAACAAATGGCATGC+CGG 0.566973 8.1:-42959163 None:intergenic
TTAGGAGGGTCCAAAGGAGG+TGG 0.567088 8.1:-42957668 None:intergenic
GACCCCTTCTAGCTCGAACA+TGG 0.574237 8.1:-42957703 None:intergenic
GAACCGGGATGGTAATGGAC+CGG 0.574270 8.1:+42956693 MS.gene63096:CDS
TTACCATCCCGGTTCAAACC+GGG 0.575921 8.1:-42956685 None:intergenic
GAAGGGAAAAGATTAGTGAA+AGG 0.577890 8.1:+42958084 MS.gene63096:CDS
TTTCCAGCGGCGATTAATGG+CGG 0.585609 8.1:+42956595 MS.gene63096:CDS
GTTAATTCAAGACTCAATAC+CGG 0.586424 8.1:+42958533 MS.gene63096:CDS
GTGTTGGTGGTGGTAAGAAG+AGG 0.596088 8.1:+42956743 MS.gene63096:CDS
ATCACTTCAGCGCCAAGTGG+AGG 0.597164 8.1:+42958379 MS.gene63096:CDS
GCATCAGGGAACAAGACTGA+GGG 0.616203 8.1:+42957584 MS.gene63096:CDS
TTCAAAACAACTCTTGACTC+CGG 0.616543 8.1:-42956712 None:intergenic
TCTTGCTTAGGAGGGTCCAA+AGG 0.620283 8.1:-42957674 None:intergenic
AACATTACCTTATTACAACC+AGG 0.621430 8.1:-42958131 None:intergenic
GGACCCGGTTTGAACCGGGA+TGG 0.621696 8.1:+42956682 MS.gene63096:CDS
GGATGTAATCTTGCTTAGGA+GGG 0.631066 8.1:-42957682 None:intergenic
TCCAGGAGCGATGATGAACG+AGG 0.631852 8.1:+42956513 MS.gene63096:CDS
TAATGGCGGTGCCAATGCCG+TGG 0.636011 8.1:+42956807 MS.gene63096:CDS
TGCTTAGGAGGGTCCAAAGG+AGG 0.637170 8.1:-42957671 None:intergenic
ATCCATGTTCGAGCTAGAAG+GGG 0.638122 8.1:+42957701 MS.gene63096:CDS
GCTACAAGAGAGCCAAGCAG+AGG 0.640109 8.1:+42959186 MS.gene63096:CDS
TTACTGGTGGAAACACACTT+AGG 0.651146 8.1:-42956787 None:intergenic
ATTGGCACCGCCATTACTGG+TGG 0.652469 8.1:-42956800 None:intergenic
TGGTTACATATGCAGGTAGG+TGG 0.652770 8.1:+42959222 MS.gene63096:CDS
AGCATCAGGGAACAAGACTG+AGG 0.656745 8.1:+42957583 MS.gene63096:CDS
GGAGATCTGGCAGTTTCCAG+CGG 0.658016 8.1:+42956582 MS.gene63096:CDS
TCAATCACTTCAGCGCCAAG+TGG 0.659625 8.1:+42958376 MS.gene63096:CDS
TCAGGGAACAAGACTGAGGG+CGG 0.668095 8.1:+42957587 MS.gene63096:CDS
ATAGAATAGATACCTCCACT+TGG 0.671733 8.1:-42958391 None:intergenic
TACCACCACCAACACCACCA+TGG 0.672358 8.1:-42956735 None:intergenic
TGTGTTTCCACCAGTAATGG+CGG 0.675613 8.1:+42956793 MS.gene63096:CDS
AGTCAGTTCAGGAAAGCATG+CGG 0.677155 8.1:+42957631 MS.gene63096:CDS
GAATGGTTACATATGCAGGT+AGG 0.689550 8.1:+42959219 MS.gene63096:CDS
CCTAAACCGTTACCAAACTG+CGG 0.692391 8.1:-42956643 None:intergenic
CCAGGAGCGATGATGAACGA+GGG 0.693487 8.1:+42956514 MS.gene63096:CDS
TTACGCGTTCTGCAAGACTG+TGG 0.695452 8.1:-42957739 None:intergenic
GAAAACGGACTAAAGCATCA+GGG 0.713041 8.1:+42957570 MS.gene63096:CDS
ATTGTGCAGAATGATAGTGA+TGG 0.726537 8.1:+42957548 MS.gene63096:intron
GAGGTGGATTGGGATTAAGG+AGG 0.727044 8.1:+42956620 MS.gene63096:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAACTAAATTATTACAATAA+AGG - chr8.1:42957463-42957482 None:intergenic 10.0%
!! TTAATGGAATTATTATTATT+TGG + chr8.1:42957525-42957544 MS.gene63096:intron 10.0%
!! TTTAATGAATATACTTAAAA+CGG + chr8.1:42956987-42957006 MS.gene63096:intron 10.0%
!!! TAGTTTTTTTTAGTTATATT+TGG + chr8.1:42956855-42956874 MS.gene63096:intron 10.0%
!!! TATTAAATATATGTATTTTG+GGG + chr8.1:42956926-42956945 MS.gene63096:intron 10.0%
!!! TGTGTTTTTTATTTTATTAT+TGG + chr8.1:42957064-42957083 MS.gene63096:intron 10.0%
!! AGTTTCAATATAAAAATCAA+GGG - chr8.1:42958599-42958618 None:intergenic 15.0%
!! ATAATAATAATCCAAATGAA+AGG + chr8.1:42958218-42958237 MS.gene63096:intron 15.0%
!! ATCATTGTTTAAAAAACATT+TGG + chr8.1:42959081-42959100 MS.gene63096:intron 15.0%
!! TTAAGGAAAATGTAAATTTA+TGG + chr8.1:42957995-42958014 MS.gene63096:intron 15.0%
!!! GTTTTTAATCATTGTATTTT+TGG + chr8.1:42957020-42957039 MS.gene63096:intron 15.0%
!!! TTCACTTTTGATTTTAAAAA+TGG + chr8.1:42957241-42957260 MS.gene63096:intron 15.0%
!!! TTTTTTTAGTTATATTTGGA+AGG + chr8.1:42956859-42956878 MS.gene63096:intron 15.0%
!! AGAAAAAAAAATGAATACCA+CGG - chr8.1:42956827-42956846 None:intergenic 20.0%
!! ATATGTGTATTTGATGTATT+TGG + chr8.1:42957486-42957505 MS.gene63096:intron 20.0%
!! CTAAAAGAATTGTAAGTAAA+GGG - chr8.1:42957769-42957788 None:intergenic 20.0%
!! GAGTTTCAATATAAAAATCA+AGG - chr8.1:42958600-42958619 None:intergenic 20.0%
!! TCTAAAAGAATTGTAAGTAA+AGG - chr8.1:42957770-42957789 None:intergenic 20.0%
!! TTTAGTAATTTCCTTTCATT+TGG - chr8.1:42958232-42958251 None:intergenic 20.0%
!!! AATTTTTCTCCAGAATAATT+AGG - chr8.1:42957440-42957459 None:intergenic 20.0%
!!! AGGAAAATTTTCAAATAAAG+AGG - chr8.1:42958649-42958668 None:intergenic 20.0%
!!! ATCTATTCTATTTCTGATTT+TGG + chr8.1:42958403-42958422 MS.gene63096:intron 20.0%
!!! ATGATGTTAAATCTTGTTTA+AGG + chr8.1:42957978-42957997 MS.gene63096:intron 20.0%
!!! GATTTTGCTTCATTTTTTTT+TGG + chr8.1:42957113-42957132 MS.gene63096:intron 20.0%
!!! GGAAAATTTTCAAATAAAGA+GGG - chr8.1:42958648-42958667 None:intergenic 20.0%
!!! TTTCTTCAATTTAGGTTATT+GGG + chr8.1:42958318-42958337 MS.gene63096:intron 20.0%
! ATTGAGACTTTCTTCAATTT+AGG + chr8.1:42958310-42958329 MS.gene63096:intron 25.0%
! GAAAGGAAATTACTAAAAGT+AGG + chr8.1:42958235-42958254 MS.gene63096:intron 25.0%
! GAGGATACAGATTAAAAATT+TGG + chr8.1:42959016-42959035 MS.gene63096:intron 25.0%
! GATAAATATACTTGATTGAG+AGG + chr8.1:42958997-42959016 MS.gene63096:intron 25.0%
! TCACAAAACGATAGAAAATT+GGG - chr8.1:42957365-42957384 None:intergenic 25.0%
! TGAACATTGGATTAATCTAA+GGG - chr8.1:42958961-42958980 None:intergenic 25.0%
! TTAACAATTAGACAGACAAA+AGG - chr8.1:42957818-42957837 None:intergenic 25.0%
! TTGAACATTGGATTAATCTA+AGG - chr8.1:42958962-42958981 None:intergenic 25.0%
!! CTTTCTTCAATTTAGGTTAT+TGG + chr8.1:42958317-42958336 MS.gene63096:intron 25.0%
!! TGTTTAACACTTACATCTTT+TGG - chr8.1:42958575-42958594 None:intergenic 25.0%
!! TTGATGTATTTGGAATTAGT+CGG + chr8.1:42957496-42957515 MS.gene63096:intron 25.0%
!!! ACTCTTCTGTTATTGTTTTT+AGG + chr8.1:42957791-42957810 MS.gene63096:intron 25.0%
!!! CTTCATTTTTTTTTGGTACA+AGG + chr8.1:42957120-42957139 MS.gene63096:intron 25.0%
!!! GTAAATTTATGGTTTTGTTG+CGG + chr8.1:42958006-42958025 MS.gene63096:intron 25.0%
!!! TCAAAATTTTGTTTCGAACT+TGG + chr8.1:42957398-42957417 MS.gene63096:intron 25.0%
AAATGAAGCAAAATCTTGAG+CGG - chr8.1:42957108-42957127 None:intergenic 30.0%
AACATTACCTTATTACAACC+AGG - chr8.1:42958134-42958153 None:intergenic 30.0%
AACATTCCAATTAGAAACAG+AGG - chr8.1:42958044-42958063 None:intergenic 30.0%
AATGGTATGTGAACTTATTC+AGG + chr8.1:42957259-42957278 MS.gene63096:intron 30.0%
AATTAGTCGGTGTGATTTAA+TGG + chr8.1:42957509-42957528 MS.gene63096:intron 30.0%
GTCACAAAACGATAGAAAAT+TGG - chr8.1:42957366-42957385 None:intergenic 30.0%
GTTAATTCAAGACTCAATAC+CGG + chr8.1:42958533-42958552 MS.gene63096:CDS 30.0%
TACAGCTAAAGATTGAACAT+TGG - chr8.1:42958974-42958993 None:intergenic 30.0%
TGAAAGGATGAAAATTCTAC+AGG + chr8.1:42958100-42958119 MS.gene63096:CDS 30.0%
TGCTCTCATATTCACATAAA+CGG + chr8.1:42958176-42958195 MS.gene63096:intron 30.0%
TGGAAAGAGAGAAAAAAACT+AGG - chr8.1:42959117-42959136 None:intergenic 30.0%
! AGAATGATAGTGATGGAAAA+CGG + chr8.1:42957555-42957574 MS.gene63096:intron 30.0%
! TATGTGAACTTATTCAGGTT+TGG + chr8.1:42957264-42957283 MS.gene63096:intron 30.0%
! TTAACACTTACATCTTTTGG+AGG - chr8.1:42958572-42958591 None:intergenic 30.0%
! TTCACAAACTATTTTGCCTA+TGG + chr8.1:42957187-42957206 MS.gene63096:intron 30.0%
! TTTAGTTCCTGGTTGTAATA+AGG + chr8.1:42958124-42958143 MS.gene63096:CDS 30.0%
!! TATTTTGGGGAGTGATTAAT+TGG + chr8.1:42956939-42956958 MS.gene63096:intron 30.0%
!! TCTGTTTCTAATTGGAATGT+TGG + chr8.1:42958043-42958062 MS.gene63096:intron 30.0%
!!! TTTTTTCTCTCTTTCCAGTA+TGG + chr8.1:42959120-42959139 MS.gene63096:intron 30.0%
AAAAATGAATACCACGGCAT+TGG - chr8.1:42956821-42956840 None:intergenic 35.0%
AATGAAGCAAAATCTTGAGC+GGG - chr8.1:42957107-42957126 None:intergenic 35.0%
ACATGGATGTAATCTTGCTT+AGG - chr8.1:42957689-42957708 None:intergenic 35.0%
ACTTCTCAACATCAAGAGTT+AGG + chr8.1:42957941-42957960 MS.gene63096:intron 35.0%
ATAGAATAGATACCTCCACT+TGG - chr8.1:42958394-42958413 None:intergenic 35.0%
ATGAATGATAGCTTCTCACT+AGG + chr8.1:42958857-42958876 MS.gene63096:intron 35.0%
GAAGGGAAAAGATTAGTGAA+AGG + chr8.1:42958084-42958103 MS.gene63096:CDS 35.0%
GATGGTTGTCCTAATTATTC+TGG + chr8.1:42957428-42957447 MS.gene63096:intron 35.0%
GATGTCTTTGCTACAACATA+AGG + chr8.1:42957306-42957325 MS.gene63096:intron 35.0%
GTTTCTAATTGGAATGTTGG+TGG + chr8.1:42958046-42958065 MS.gene63096:intron 35.0%
TGAATAACGTCTGCAAAAGA+TGG - chr8.1:42958756-42958775 None:intergenic 35.0%
TGTTCAATCTTTAGCTGTAG+AGG + chr8.1:42958975-42958994 MS.gene63096:intron 35.0%
TGTTGAGATTACACTTCCAT+AGG - chr8.1:42957206-42957225 None:intergenic 35.0%
TTCAAAACAACTCTTGACTC+CGG - chr8.1:42956715-42956734 None:intergenic 35.0%
! AATGTTGGTGGACAATAAAC+AGG + chr8.1:42958058-42958077 MS.gene63096:intron 35.0%
! ATTCTACAGGATTTAGTTCC+TGG + chr8.1:42958113-42958132 MS.gene63096:CDS 35.0%
! ATTGTGCAGAATGATAGTGA+TGG + chr8.1:42957548-42957567 MS.gene63096:intron 35.0%
! CTTGTAGCTTGTGAAACAAA+TGG - chr8.1:42959174-42959193 None:intergenic 35.0%
! GAGCGAAGTAGTCAAAATTT+TGG - chr8.1:42957333-42957352 None:intergenic 35.0%
! TTAGGTTATTGGGAAAGCAT+TGG + chr8.1:42958328-42958347 MS.gene63096:intron 35.0%
!! ACTTACATCTTTTGGAGGAA+AGG - chr8.1:42958567-42958586 None:intergenic 35.0%
!! AGTAGGAAAAACTTGCTACT+TGG + chr8.1:42958252-42958271 MS.gene63096:intron 35.0%
!! TCTATGCCTCTGTTTCTAAT+TGG + chr8.1:42958035-42958054 MS.gene63096:intron 35.0%
!!! TCAAGAGTTGTTTTGAACCA+TGG + chr8.1:42956718-42956737 MS.gene63096:CDS 35.0%
AAGTGTGTTTCCACCAGTAA+TGG + chr8.1:42956790-42956809 MS.gene63096:CDS 40.0%
ACCAGAATGGTTACATATGC+AGG + chr8.1:42959215-42959234 MS.gene63096:CDS 40.0%
ACCTGCATATGTAACCATTC+TGG - chr8.1:42959219-42959238 None:intergenic 40.0%
ACTCTTGATGTTGAGAAGTG+CGG - chr8.1:42957940-42957959 None:intergenic 40.0%
CAACAAACGTTTGATCTTGC+CGG + chr8.1:42959144-42959163 MS.gene63096:CDS 40.0%
CAGATCTCCGCTAAACTAAA+CGG - chr8.1:42956571-42956590 None:intergenic 40.0%
CTATGATGTCACAGCCAAAA+CGG - chr8.1:42957885-42957904 None:intergenic 40.0%
CTCACAGAGTATAGTAGTTC+TGG + chr8.1:42958693-42958712 MS.gene63096:intron 40.0%
GAATGGTTACATATGCAGGT+AGG + chr8.1:42959219-42959238 MS.gene63096:CDS 40.0%
GGACAATAAACAGGCTAGAA+GGG + chr8.1:42958067-42958086 MS.gene63096:intron 40.0%
GGATGTAATCTTGCTTAGGA+GGG - chr8.1:42957685-42957704 None:intergenic 40.0%
GTCGTATTTCCATTCCCATT+CGG - chr8.1:42956547-42956566 None:intergenic 40.0%
TGGACAATAAACAGGCTAGA+AGG + chr8.1:42958066-42958085 MS.gene63096:intron 40.0%
TGGATGTAATCTTGCTTAGG+AGG - chr8.1:42957686-42957705 None:intergenic 40.0%
TTACTGGTGGAAACACACTT+AGG - chr8.1:42956790-42956809 None:intergenic 40.0%
TTCGAACTTGGATGTCTAGA+TGG + chr8.1:42957410-42957429 MS.gene63096:intron 40.0%
TTGTGAAACAAATGGCATGC+CGG - chr8.1:42959166-42959185 None:intergenic 40.0%
TTTAAGAAGCTTGCAACCTC+TGG + chr8.1:42958900-42958919 MS.gene63096:intron 40.0%
! CAAACGTTTGTTGACCATAC+TGG - chr8.1:42959137-42959156 None:intergenic 40.0%
! TTAGGACAGTTTGGTGAGTT+TGG + chr8.1:42956661-42956680 MS.gene63096:CDS 40.0%
!! GAAAACGGACTAAAGCATCA+GGG + chr8.1:42957570-42957589 MS.gene63096:CDS 40.0%
!!! AGAGTTGTTTTGAACCATGG+TGG + chr8.1:42956721-42956740 MS.gene63096:CDS 40.0%
AACCTCTGGTCTCTGCATAA+TGG + chr8.1:42958914-42958933 MS.gene63096:intron 45.0%
AACGAGGGTTCATTTCCGAA+TGG + chr8.1:42956529-42956548 MS.gene63096:CDS 45.0%
ACATCCATGTTCGAGCTAGA+AGG + chr8.1:42957699-42957718 MS.gene63096:CDS 45.0%
ACCTCTGGTCTCTGCATAAT+GGG + chr8.1:42958915-42958934 MS.gene63096:intron 45.0%
ACGAGGGTTCATTTCCGAAT+GGG + chr8.1:42956530-42956549 MS.gene63096:CDS 45.0%
ATCCATGTTCGAGCTAGAAG+GGG + chr8.1:42957701-42957720 MS.gene63096:CDS 45.0%
ATTACCATCCCGGTTCAAAC+CGG - chr8.1:42956689-42956708 None:intergenic 45.0%
CATCCATGTTCGAGCTAGAA+GGG + chr8.1:42957700-42957719 MS.gene63096:CDS 45.0%
CCTAAACCGTTACCAAACTG+CGG - chr8.1:42956646-42956665 None:intergenic 45.0%
GGTTCATTTCCGAATGGGAA+TGG + chr8.1:42956535-42956554 MS.gene63096:CDS 45.0%
GTGAGTCATGTCTTGTCAGA+AGG - chr8.1:42958669-42958688 None:intergenic 45.0%
GTTGAAGGAGAAGTCAGTTC+AGG + chr8.1:42957620-42957639 MS.gene63096:CDS 45.0%
TGGTTACATATGCAGGTAGG+TGG + chr8.1:42959222-42959241 MS.gene63096:CDS 45.0%
TGTGTTTCCACCAGTAATGG+CGG + chr8.1:42956793-42956812 MS.gene63096:CDS 45.0%
TTACATATGCAGGTAGGTGG+TGG + chr8.1:42959225-42959244 MS.gene63096:CDS 45.0%
! AGTCAGTTCAGGAAAGCATG+CGG + chr8.1:42957631-42957650 MS.gene63096:CDS 45.0%
! CAGGTTTGGTCGCAATTTCA+AGG + chr8.1:42957278-42957297 MS.gene63096:intron 45.0%
! CGTTTAGTTTAGCGGAGATC+TGG + chr8.1:42956569-42956588 MS.gene63096:CDS 45.0%
! GGTAACGGTTTAGGACAGTT+TGG + chr8.1:42956652-42956671 MS.gene63096:CDS 45.0%
! TACGACGCCGTTTAGTTTAG+CGG + chr8.1:42956561-42956580 MS.gene63096:CDS 45.0%
!! GGAAAACGGACTAAAGCATC+AGG + chr8.1:42957569-42957588 MS.gene63096:CDS 45.0%
!! GTTTTGAACCATGGTGGTGT+TGG + chr8.1:42956727-42956746 MS.gene63096:CDS 45.0%
!!! CGTTTTGGCTGTGACATCAT+AGG + chr8.1:42957883-42957902 MS.gene63096:intron 45.0%
!!! AATATTAAATATATGTATTT+TGG + chr8.1:42956924-42956943 MS.gene63096:intron 5.0%
!!! ATATTAAATATATGTATTTT+GGG + chr8.1:42956925-42956944 MS.gene63096:intron 5.0%
AAGCAGTAAGCCACCTCCTT+TGG + chr8.1:42957658-42957677 MS.gene63096:CDS 50.0%
AGCATCAGGGAACAAGACTG+AGG + chr8.1:42957583-42957602 MS.gene63096:CDS 50.0%
CAGTTTCCAGCGGCGATTAA+TGG + chr8.1:42956592-42956611 MS.gene63096:CDS 50.0%
GCAGAGGTTCTTCACCAGAA+TGG + chr8.1:42959202-42959221 MS.gene63096:CDS 50.0%
GCATCAGGGAACAAGACTGA+GGG + chr8.1:42957584-42957603 MS.gene63096:CDS 50.0%
GGTTTGAACCGGGATGGTAA+TGG + chr8.1:42956688-42956707 MS.gene63096:CDS 50.0%
TCAATCACTTCAGCGCCAAG+TGG + chr8.1:42958376-42958395 MS.gene63096:CDS 50.0%
TCTGGTGAAGAACCTCTGCT+TGG - chr8.1:42959201-42959220 None:intergenic 50.0%
TCTTGCTTAGGAGGGTCCAA+AGG - chr8.1:42957677-42957696 None:intergenic 50.0%
TGGAGGAAAGGCTTCAATGC+CGG - chr8.1:42958555-42958574 None:intergenic 50.0%
TTACCATCCCGGTTCAAACC+GGG - chr8.1:42956688-42956707 None:intergenic 50.0%
TTACGCGTTCTGCAAGACTG+TGG - chr8.1:42957742-42957761 None:intergenic 50.0%
TTTCCAGCGGCGATTAATGG+CGG + chr8.1:42956595-42956614 MS.gene63096:CDS 50.0%
! AGTTTGGACCCGGTTTGAAC+CGG + chr8.1:42956677-42956696 MS.gene63096:CDS 50.0%
! CAGTTTGGTGAGTTTGGACC+CGG + chr8.1:42956667-42956686 MS.gene63096:CDS 50.0%
! GGCGGTGATGGTAAAGTTGA+AGG + chr8.1:42957605-42957624 MS.gene63096:CDS 50.0%
! TTGAACCATGGTGGTGTTGG+TGG + chr8.1:42956730-42956749 MS.gene63096:CDS 50.0%
!! CCGCAGTTTGGTAACGGTTT+AGG + chr8.1:42956643-42956662 MS.gene63096:CDS 50.0%
!! GAGGTGGATTGGGATTAAGG+AGG + chr8.1:42956620-42956639 MS.gene63096:CDS 50.0%
!! GTGTTGGTGGTGGTAAGAAG+AGG + chr8.1:42956743-42956762 MS.gene63096:CDS 50.0%
!!! TGAGTTGAGAAGCGCCGTTT+TGG + chr8.1:42957868-42957887 MS.gene63096:intron 50.0%
AACAAGACTGAGGGCGGTGA+TGG + chr8.1:42957593-42957612 MS.gene63096:CDS 55.0%
ACTCCGGTCCATTACCATCC+CGG - chr8.1:42956699-42956718 None:intergenic 55.0%
AGGAGGCCGCAGTTTGGTAA+CGG + chr8.1:42956637-42956656 MS.gene63096:CDS 55.0%
ATCACTTCAGCGCCAAGTGG+AGG + chr8.1:42958379-42958398 MS.gene63096:CDS 55.0%
ATTGGCACCGCCATTACTGG+TGG - chr8.1:42956803-42956822 None:intergenic 55.0%
CCAGGAGCGATGATGAACGA+GGG + chr8.1:42956514-42956533 MS.gene63096:CDS 55.0%
GCCCATTATGCAGAGACCAG+AGG - chr8.1:42958919-42958938 None:intergenic 55.0%
GCTACAAGAGAGCCAAGCAG+AGG + chr8.1:42959186-42959205 MS.gene63096:CDS 55.0%
GGAGATCTGGCAGTTTCCAG+CGG + chr8.1:42956582-42956601 MS.gene63096:CDS 55.0%
GGATTAAGGAGGCCGCAGTT+TGG + chr8.1:42956631-42956650 MS.gene63096:CDS 55.0%
TACCACCACCAACACCACCA+TGG - chr8.1:42956738-42956757 None:intergenic 55.0%
TCAGGGAACAAGACTGAGGG+CGG + chr8.1:42957587-42957606 MS.gene63096:CDS 55.0%
TCCAGGAGCGATGATGAACG+AGG + chr8.1:42956513-42956532 MS.gene63096:CDS 55.0%
TGCTTAGGAGGGTCCAAAGG+AGG - chr8.1:42957674-42957693 None:intergenic 55.0%
TTAGGAGGGTCCAAAGGAGG+TGG - chr8.1:42957671-42957690 None:intergenic 55.0%
! GTTTGGACCCGGTTTGAACC+GGG + chr8.1:42956678-42956697 MS.gene63096:CDS 55.0%
!! AACCATGGTGGTGTTGGTGG+TGG + chr8.1:42956733-42956752 MS.gene63096:CDS 55.0%
!! GAACCGGGATGGTAATGGAC+CGG + chr8.1:42956693-42956712 MS.gene63096:CDS 55.0%
!! GACCCCTTCTAGCTCGAACA+TGG - chr8.1:42957706-42957725 None:intergenic 55.0%
!! GCGGAGGTGGATTGGGATTA+AGG + chr8.1:42956617-42956636 MS.gene63096:CDS 55.0%
CCCTCGTTCATCATCGCTCC+TGG - chr8.1:42956517-42956536 None:intergenic 60.0%
TAATGGCGGCGGAGGTGGAT+TGG + chr8.1:42956609-42956628 MS.gene63096:CDS 60.0%
! AATGGCGGCGGAGGTGGATT+GGG + chr8.1:42956610-42956629 MS.gene63096:CDS 60.0%
! TAATGGCGGTGCCAATGCCG+TGG + chr8.1:42956807-42956826 MS.gene63096:CDS 60.0%
!! GGCATTGGCACCGCCATTAC+TGG - chr8.1:42956806-42956825 None:intergenic 60.0%
CCAGCGGCGATTAATGGCGG+CGG + chr8.1:42956598-42956617 MS.gene63096:CDS 65.0%
GCGATTAATGGCGGCGGAGG+TGG + chr8.1:42956604-42956623 MS.gene63096:CDS 65.0%
! GGACCCGGTTTGAACCGGGA+TGG + chr8.1:42956682-42956701 MS.gene63096:CDS 65.0%
CCGCCGCCATTAATCGCCGC+TGG - chr8.1:42956601-42956620 None:intergenic 70.0%
GCGGCGATTAATGGCGGCGG+AGG + chr8.1:42956601-42956620 MS.gene63096:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 42956508 42959266 42956508 ID=MS.gene63096
chr8.1 mRNA 42956508 42959266 42956508 ID=MS.gene63096.t1;Parent=MS.gene63096
chr8.1 exon 42956508 42956828 42956508 ID=MS.gene63096.t1.exon1;Parent=MS.gene63096.t1
chr8.1 CDS 42956508 42956828 42956508 ID=cds.MS.gene63096.t1;Parent=MS.gene63096.t1
chr8.1 exon 42957557 42957757 42957557 ID=MS.gene63096.t1.exon2;Parent=MS.gene63096.t1
chr8.1 CDS 42957557 42957757 42957557 ID=cds.MS.gene63096.t1;Parent=MS.gene63096.t1
chr8.1 exon 42958080 42958145 42958080 ID=MS.gene63096.t1.exon3;Parent=MS.gene63096.t1
chr8.1 CDS 42958080 42958145 42958080 ID=cds.MS.gene63096.t1;Parent=MS.gene63096.t1
chr8.1 exon 42958332 42958400 42958332 ID=MS.gene63096.t1.exon4;Parent=MS.gene63096.t1
chr8.1 CDS 42958332 42958400 42958332 ID=cds.MS.gene63096.t1;Parent=MS.gene63096.t1
chr8.1 exon 42958509 42958580 42958509 ID=MS.gene63096.t1.exon5;Parent=MS.gene63096.t1
chr8.1 CDS 42958509 42958580 42958509 ID=cds.MS.gene63096.t1;Parent=MS.gene63096.t1
chr8.1 exon 42959138 42959266 42959138 ID=MS.gene63096.t1.exon6;Parent=MS.gene63096.t1
chr8.1 CDS 42959138 42959266 42959138 ID=cds.MS.gene63096.t1;Parent=MS.gene63096.t1
Gene Sequence

>MS.gene63096

ATGGATCCAGGAGCGATGATGAACGAGGGTTCATTTCCGAATGGGAATGGAAATACGACGCCGTTTAGTTTAGCGGAGATCTGGCAGTTTCCAGCGGCGATTAATGGCGGCGGAGGTGGATTGGGATTAAGGAGGCCGCAGTTTGGTAACGGTTTAGGACAGTTTGGTGAGTTTGGACCCGGTTTGAACCGGGATGGTAATGGACCGGAGTCAAGAGTTGTTTTGAACCATGGTGGTGTTGGTGGTGGTAAGAAGAGGCGTGACTCTGAAGATGATTCTCCTAAGTGTGTTTCCACCAGTAATGGCGGTGCCAATGCCGTGGTATTCATTTTTTTTTCTTCTTTTTTTAGTTTTTTTTAGTTATATTTGGAAGGAATTCATTGCAGTAACTGTTTGATTAAATAAAGTATAAATTAAATATTAAATATATGTATTTTGGGGAGTGATTAATTGGTTGATTAAGAAAGATGAGTTGTTGTTTTAATGAATATACTTAAAACGGATCTAATTATGTTTTTAATCATTGTATTTTTGGATTTTGTATATCTGCTAAAAATGTGTTTTTTATTTTATTATTGGAAATTTTTTGCACTTTTCCCGCTCAAGATTTTGCTTCATTTTTTTTTGGTACAAGGAATAAAATAGTGTTGTTATAAATTCTAATTATGTTTTTAACAATTTCACAAACTATTTTGCCTATGGAAGTGTAATCTCAACACTTATTGATTACTATTTCACTTTTGATTTTAAAAATGGTATGTGAACTTATTCAGGTTTGGTCGCAATTTCAAGGATTTTGATGTCTTTGCTACAACATAAGGACCAAAATTTTGACTACTTCGCTCGTATTTAAACCCAATTTTCTATCGTTTTGTGACTATGATTGCAATTCAAAATTTTGTTTCGAACTTGGATGTCTAGATGGTTGTCCTAATTATTCTGGAGAAAAATTCCTTTATTGTAATAATTTAGTTATCTATATGTGTATTTGATGTATTTGGAATTAGTCGGTGTGATTTAATGGAATTATTATTATTTGGATTGTGCAGAATGATAGTGATGGAAAACGGACTAAAGCATCAGGGAACAAGACTGAGGGCGGTGATGGTAAAGTTGAAGGAGAAGTCAGTTCAGGAAAGCATGCGGAGCAAAGCAGTAAGCCACCTCCTTTGGACCCTCCTAAGCAAGATTACATCCATGTTCGAGCTAGAAGGGGTCAAGCTACTGATAGCCACAGTCTTGCAGAACGCGTAATTTACCCTTTACTTACAATTCTTTTAGAAACTCTTCTGTTATTGTTTTTAGGTCCTTTTGTCTGTCTAATTGTTAAGATCAATTTCTTAAGCAAGATAACAGCAATTGAGTTGAGAAGCGCCGTTTTGGCTGTGACATCATAGGTTTTGATAATCAGATTATCAGACATATTTAACCGCACTTCTCAACATCAAGAGTTAGGACACAATCGTTGCTATGATGTTAAATCTTGTTTAAGGAAAATGTAAATTTATGGTTTTGTTGCGGTTAGAGTCTATGCCTCTGTTTCTAATTGGAATGTTGGTGGACAATAAACAGGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTACAGGATTTAGTTCCTGGTTGTAATAAGGTAATGTTTTTACTACTTGTTAATTTTTTCTGCTCTCATATTCACATAAACGGAAATGAAATGAAAATAGTAATAATAATAATCCAAATGAAAGGAAATTACTAAAAGTAGGAAAAACTTGCTACTTGGTCAGTTATAATCTCATATTTTCTATGAAATAATAAATTGAGACTTTCTTCAATTTAGGTTATTGGGAAAGCATTGGTGCTTGATGAGATAATTAATTATATTCAATCACTTCAGCGCCAAGTGGAGGTATCTATTCTATTTCTGATTTTGGTATTTACTGAATTATAATCTTTTCAAAATTTATAATGTTTTGAAATTGATTTTTGACGATTGTAATGTTACTTGATGTCACAGTTTTTATCGATGAAACTTGAAGCAGTTAATTCAAGACTCAATACCGGCATTGAAGCCTTTCCTCCAAAAGATGTAAGTGTTAAACATCCCTTGATTTTTATATTGAAACTCTAATCAAGTTGAAAGCTTGTTTCTACCCTCTTTATTTGAAAATTTTCCTTCTGACAAGACATGACTCACATAACTCACAGAGTATAGTAGTTCTGGTGATTGCTATGTTGCAAGTATGTATAACAACGTTGAACCATCTTTTGCAGACGTTATTCACGCACAACATTTTTGTTTCATTTGCAAATTTTGTTGTTGAGTACTCTGCAATTTTTGTTGTTGTTGAGTATTTTGCTTCAAATGAATGATAGCTTCTCACTAGGTGCTTTTCAGAACTGATTAATTTAAGAAGCTTGCAACCTCTGGTCTCTGCATAATGGGCGAGAGTATTGAACTCTCAGCCCTTAGATTAATCCAATGTTCAATCTTTAGCTGTAGAGGATAAATATACTTGATTGAGAGGATACAGATTAAAAATTTGGATTTAAATGATTCTAAATGATTGATTTAGTTTTTTATCATTCATCATTGTTTAAAAAACATTTGGACTTACAAGACCTAGTTTTTTTCTCTCTTTCCAGTATGGTCAACAAACGTTTGATCTTGCCGGCATGCCATTTGTTTCACAAGCTACAAGAGAGCCAAGCAGAGGTTCTTCACCAGAATGGTTACATATGCAGGTAGGTGGTGGTTTCGAAAGAACGACGTAG
Protein sequence

>MS.gene63096.t1

MDPGAMMNEGSFPNGNGNTTPFSLAEIWQFPAAINGGGGGLGLRRPQFGNGLGQFGEFGPGLNRDGNGPESRVVLNHGGVGGGKKRRDSEDDSPKCVSTSNGGANAVNDSDGKRTKASGNKTEGGDGKVEGEVSSGKHAEQSSKPPPLDPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDYGQQTFDLAGMPFVSQATREPSRGSSPEWLHMQVGGGFERTT