AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63322

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63322.t1 MTR_3g067910 87.963 108 13 0 21 128 2 109 4.31e-67 198
MS.gene63322.t1 MTR_5g045560 79.508 122 25 0 1 122 1 122 1.46e-63 194
MS.gene63322.t1 MTR_2g085280 71.875 128 36 0 1 128 1 128 7.28e-62 189
MS.gene63322.t1 MTR_2g085250 71.875 128 36 0 1 128 1 128 8.39e-62 189
MS.gene63322.t1 MTR_3g052870 73.171 123 33 0 1 123 1 123 1.02e-60 186
MS.gene63322.t1 MTR_1g105920 73.171 123 33 0 1 123 1 123 1.76e-60 186
MS.gene63322.t1 MTR_1g077360 72.131 122 34 0 1 122 1 122 1.28e-59 184
MS.gene63322.t1 MTR_8g043650 71.545 123 35 0 1 123 1 123 1.78e-59 183
MS.gene63322.t1 MTR_1g075600 73.171 123 33 0 1 123 1 123 8.46e-59 181
MS.gene63322.t1 MTR_5g055100 72.358 123 34 0 1 123 1 123 4.49e-58 179
MS.gene63322.t1 MTR_1g105910 71.667 120 34 0 1 120 1 120 6.86e-58 179
MS.gene63322.t1 MTR_5g053390 71.318 129 36 1 1 128 1 129 4.67e-57 177
MS.gene63322.t1 MTR_1g106070 69.106 123 38 0 1 123 1 123 6.63e-57 175
MS.gene63322.t1 MTR_2g030740 69.919 123 37 0 1 123 1 123 7.00e-57 177
MS.gene63322.t1 MTR_3g052920 69.919 123 37 0 1 123 1 123 1.09e-56 176
MS.gene63322.t1 MTR_1g108510 68.293 123 39 0 1 123 1 123 7.55e-55 171
MS.gene63322.t1 MTR_1g012570 70.732 123 36 0 1 123 1 123 1.21e-54 171
MS.gene63322.t1 MTR_3g030770 68.293 123 39 0 1 123 1 123 1.53e-54 170
MS.gene63322.t1 MTR_1g108580 66.667 123 41 0 1 123 1 123 8.21e-54 168
MS.gene63322.t1 MTR_2g093190 66.667 123 41 0 1 123 1 123 1.16e-51 163
MS.gene63322.t1 MTR_0121s0100 64.228 123 44 0 1 123 1 123 3.69e-51 159
MS.gene63322.t1 MTR_3g030780 61.789 123 47 0 1 123 1 123 2.76e-50 156
MS.gene63322.t1 MTR_0121s0080 62.602 123 46 0 1 123 1 123 2.21e-47 152
MS.gene63322.t1 MTR_1g105905 65.714 105 36 0 18 122 1 105 4.68e-44 143
MS.gene63322.t1 MTR_3g080940 53.448 116 54 0 9 124 9 124 8.71e-39 129
MS.gene63322.t1 MTR_1g075570 62.264 106 26 1 18 123 1 92 1.02e-36 123
MS.gene63322.t1 MTR_7g062350 51.969 127 60 1 3 128 14 140 1.36e-34 120
MS.gene63322.t1 MTR_3g067915 79.688 64 13 0 60 123 30 93 1.31e-31 108
MS.gene63322.t1 MTR_3g067875 85.714 56 8 0 18 73 1 56 6.80e-28 97.8
MS.gene63322.t1 MTR_8g086290 49.425 87 37 1 4 90 7 86 8.53e-24 90.5
MS.gene63322.t1 MTR_2g105290 51.948 77 37 0 1 77 4 80 1.03e-23 90.5
MS.gene63322.t1 MTR_1g108500 45.299 117 41 2 3 117 89 184 8.78e-23 91.3
MS.gene63322.t1 MTR_3g067870 69.841 63 19 0 16 78 83 145 3.93e-22 85.9
MS.gene63322.t1 MTR_1g047550 50.704 71 35 0 9 79 2 72 1.65e-21 84.7
MS.gene63322.t1 MTR_7g028448 54.545 77 35 0 4 80 7 83 4.27e-21 83.6
MS.gene63322.t1 MTR_4g036915 54.545 77 35 0 4 80 7 83 4.27e-21 83.6
MS.gene63322.t1 MTR_8g079502 50.704 71 35 0 9 79 2 72 4.67e-21 83.6
MS.gene63322.t1 MTR_8g051580 45.570 79 43 0 9 87 2 80 2.38e-20 82.0
MS.gene63322.t1 MTR_1g054265 45.570 79 43 0 9 87 2 80 1.09e-19 79.7
MS.gene63322.t1 MTR_1g063160 43.038 79 45 0 9 87 2 80 1.31e-19 80.1
MS.gene63322.t1 MTR_4g131030 46.575 73 39 0 9 81 2 74 2.06e-19 80.1
MS.gene63322.t1 MTR_8g046350 45.070 71 39 0 9 79 2 72 2.36e-18 76.3
MS.gene63322.t1 MTR_4g127140 53.247 77 36 0 1 77 4 80 4.32e-18 76.3
MS.gene63322.t1 MTR_1g053070 49.383 81 41 0 9 89 2 82 1.14e-16 73.6
MS.gene63322.t1 MTR_4g094632 37.736 106 64 1 9 114 2 105 1.52e-16 71.6
MS.gene63322.t1 MTR_4g102530 46.575 73 39 0 10 82 3 75 1.53e-15 69.7
MS.gene63322.t1 MTR_3g005530 47.059 68 36 0 9 76 2 69 1.71e-15 70.1
MS.gene63322.t1 MTR_4g093970 50.000 66 33 0 10 75 29 94 1.99e-15 70.1
MS.gene63322.t1 MTR_5g066180 46.479 71 38 0 9 79 2 72 2.82e-15 69.7
MS.gene63322.t1 MTR_8g033270 50.000 68 34 0 9 76 2 69 5.50e-15 69.3
MS.gene63322.t1 MTR_0003s0590 50.000 68 34 0 9 76 2 69 9.84e-15 68.6
MS.gene63322.t1 MTR_7g075870 49.254 67 34 0 10 76 3 69 1.51e-14 67.4
MS.gene63322.t1 MTR_3g452380 44.595 74 41 0 3 76 11 84 1.56e-14 67.8
MS.gene63322.t1 MTR_4g094638 47.826 69 36 0 9 77 2 70 1.64e-14 66.6
MS.gene63322.t1 MTR_1g101970 50.000 68 34 0 9 76 2 69 2.33e-14 66.6
MS.gene63322.t1 MTR_8g087860 47.059 68 36 0 9 76 18 85 3.25e-14 67.0
MS.gene63322.t1 MTR_6g464720 49.275 69 34 1 9 76 2 70 3.30e-14 67.0
MS.gene63322.t1 MTR_2g009890 43.421 76 43 0 9 84 2 77 4.06e-14 67.0
MS.gene63322.t1 MTR_2g017865 47.059 68 36 0 9 76 17 84 4.63e-14 66.6
MS.gene63322.t1 MTR_8g033220 46.377 69 37 0 10 78 3 71 7.00e-14 65.9
MS.gene63322.t1 MTR_8g033220 46.377 69 37 0 10 78 3 71 7.40e-14 65.9
MS.gene63322.t1 MTR_7g075870 48.529 68 34 1 10 76 3 70 2.10e-13 64.3
MS.gene63322.t1 MTR_4g084740 46.053 76 39 2 9 83 2 76 2.19e-13 65.5
MS.gene63322.t1 MTR_5g031000 45.588 68 37 0 9 76 2 69 2.93e-13 64.3
MS.gene63322.t1 MTR_4g109830 46.377 69 36 1 9 76 2 70 3.12e-13 64.3
MS.gene63322.t1 MTR_5g031000 45.588 68 37 0 9 76 2 69 3.27e-13 64.3
MS.gene63322.t1 MTR_5g032520 36.792 106 58 2 10 108 3 106 4.13e-13 63.9
MS.gene63322.t1 MTR_3g102570 42.045 88 49 2 9 95 2 88 4.36e-13 64.7
MS.gene63322.t1 MTR_5g032150 46.269 67 36 0 10 76 3 69 4.73e-13 63.5
MS.gene63322.t1 MTR_7g016600 47.826 69 35 1 9 76 2 70 5.14e-13 63.9
MS.gene63322.t1 MTR_5g046870 47.826 69 35 1 9 76 2 70 6.36e-13 60.8
MS.gene63322.t1 MTR_5g046790 44.928 69 37 1 9 76 2 70 6.41e-13 63.2
MS.gene63322.t1 MTR_2g461710 50.000 56 28 0 9 64 2 57 1.73e-12 58.5
MS.gene63322.t1 MTR_8g066260 43.478 69 38 1 9 76 2 70 2.07e-12 62.0
MS.gene63322.t1 MTR_1g038300 45.714 70 36 1 9 76 2 71 2.27e-12 62.0
MS.gene63322.t1 MTR_5g066960 45.763 59 32 0 9 67 2 60 2.60e-12 58.2
MS.gene63322.t1 MTR_7g016630 40.278 72 42 1 9 79 2 73 1.03e-11 60.5
MS.gene63322.t1 MTR_4g109810 49.153 59 30 0 9 67 2 60 1.33e-11 59.7
MS.gene63322.t1 MTR_6g015975 51.786 56 27 0 9 64 2 57 1.79e-11 59.7
MS.gene63322.t1 MTR_8g097090 44.928 69 37 1 9 76 2 70 2.58e-11 58.9
MS.gene63322.t1 MTR_7g075850 44.286 70 37 1 9 76 2 71 2.65e-11 59.3
MS.gene63322.t1 MTR_3g084980 48.333 60 31 0 9 68 2 61 2.91e-11 58.9
MS.gene63322.t1 MTR_3g088615 41.429 70 39 1 9 76 2 71 4.26e-11 57.8
MS.gene63322.t1 MTR_1g029670 48.214 56 29 0 9 64 2 57 4.47e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63322.t1 AT5G60440 57.025 121 50 1 6 124 4 124 2.07e-40 136
MS.gene63322.t1 AT4G36590 54.630 108 44 1 7 109 5 112 3.87e-30 108
MS.gene63322.t1 AT2G24840 46.610 118 57 2 9 124 63 176 5.57e-27 101
MS.gene63322.t1 AT1G65360 48.214 112 56 1 6 117 4 113 5.96e-27 100
MS.gene63322.t1 AT1G01530 50.000 104 50 1 6 109 4 105 1.64e-26 99.4
MS.gene63322.t1 AT2G34440 39.640 111 66 1 9 119 2 111 2.28e-22 87.0
MS.gene63322.t1 AT3G04100 35.043 117 71 2 6 117 11 127 6.41e-20 81.3
MS.gene63322.t1 AT3G66656 51.471 68 33 0 9 76 2 69 1.55e-18 77.0
MS.gene63322.t1 AT1G72350 50.685 73 34 1 9 81 43 113 2.12e-18 77.8
MS.gene63322.t1 AT2G45650 52.941 68 32 0 9 76 2 69 6.20e-17 74.3
MS.gene63322.t1 AT2G22540 42.308 104 55 1 10 108 3 106 8.22e-17 73.9
MS.gene63322.t1 AT2G22540 42.308 104 55 1 10 108 3 106 8.22e-17 73.9
MS.gene63322.t1 AT2G45660 48.529 68 35 0 10 77 3 70 2.49e-16 70.9
MS.gene63322.t1 AT4G22950 44.737 76 42 0 10 85 3 78 4.48e-16 70.5
MS.gene63322.t1 AT2G45660 48.529 68 35 0 10 77 3 70 5.85e-16 71.2
MS.gene63322.t1 AT4G09960 44.156 77 42 1 1 76 19 95 1.05e-15 71.2
MS.gene63322.t1 AT4G09960 47.059 68 36 0 9 76 2 69 1.50e-15 70.1
MS.gene63322.t1 AT4G22950 49.254 67 34 0 10 76 3 69 1.57e-15 70.1
MS.gene63322.t1 AT4G22950 49.254 67 34 0 10 76 3 69 1.57e-15 70.1
MS.gene63322.t1 AT4G09960 47.059 68 36 0 9 76 2 69 1.79e-15 70.1
MS.gene63322.t1 AT4G09960 45.833 72 39 0 5 76 8 79 1.85e-15 70.5
MS.gene63322.t1 AT4G09960 47.059 68 36 0 9 76 3 70 1.85e-15 70.1
MS.gene63322.t1 AT1G77950 46.053 76 39 2 9 83 2 76 3.78e-15 69.7
MS.gene63322.t1 AT1G77950 46.053 76 39 2 9 83 2 76 3.78e-15 69.7
MS.gene63322.t1 AT1G77950 46.053 76 39 2 9 83 2 76 3.78e-15 69.7
MS.gene63322.t1 AT1G77950 46.053 76 39 2 9 83 2 76 3.78e-15 69.7
MS.gene63322.t1 AT5G13790 48.529 68 35 0 9 76 2 69 3.78e-15 69.7
MS.gene63322.t1 AT5G13790 48.529 68 35 0 9 76 2 69 4.32e-15 69.7
MS.gene63322.t1 AT4G18960 45.333 75 41 0 2 76 11 85 4.37e-15 69.3
MS.gene63322.t1 AT4G09960 47.059 68 36 0 9 76 97 164 4.96e-15 70.1
MS.gene63322.t1 AT3G61120 51.471 68 33 0 9 76 2 69 5.04e-15 69.3
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 5.72e-15 66.2
MS.gene63322.t1 AT5G51870 47.887 71 37 0 6 76 22 92 7.88e-15 67.8
MS.gene63322.t1 AT5G51870 49.254 67 34 0 10 76 3 69 8.32e-15 67.4
MS.gene63322.t1 AT5G51870 49.254 67 34 0 10 76 3 69 8.35e-15 68.2
MS.gene63322.t1 AT3G57390 50.000 68 34 0 9 76 2 69 9.36e-15 68.2
MS.gene63322.t1 AT1G77980 42.045 88 50 1 9 95 2 89 1.01e-14 69.3
MS.gene63322.t1 AT5G51870 49.254 67 34 0 10 76 3 69 1.03e-14 68.2
MS.gene63322.t1 AT5G51860 49.254 67 34 0 10 76 3 69 1.10e-14 67.8
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 1.16e-14 66.6
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 1.16e-14 66.6
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 1.16e-14 66.6
MS.gene63322.t1 AT5G51870 49.254 67 34 0 10 76 13 79 1.21e-14 67.8
MS.gene63322.t1 AT3G57390 50.000 68 34 0 9 76 2 69 1.43e-14 68.2
MS.gene63322.t1 AT4G24540 48.529 68 35 0 9 76 2 69 1.51e-14 67.4
MS.gene63322.t1 AT5G51860 49.254 67 34 0 10 76 3 69 1.56e-14 67.4
MS.gene63322.t1 AT1G22130 40.217 92 54 1 9 99 2 93 1.63e-14 68.6
MS.gene63322.t1 AT3G57230 45.588 68 37 0 9 76 2 69 1.77e-14 65.9
MS.gene63322.t1 AT2G22540 41.346 104 51 2 10 108 3 101 1.92e-14 67.4
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 2.21e-14 65.9
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 2.21e-14 65.9
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 2.21e-14 65.9
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 2.21e-14 65.9
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 2.21e-14 65.9
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 2.86e-14 66.2
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 2.86e-14 66.2
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 3.16e-14 66.6
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 3.16e-14 66.6
MS.gene63322.t1 AT5G62165 47.761 67 35 0 10 76 3 69 3.16e-14 66.6
MS.gene63322.t1 AT2G42830 47.059 68 36 0 9 76 17 84 4.11e-14 66.6
MS.gene63322.t1 AT2G42830 47.059 68 36 0 9 76 17 84 4.14e-14 66.6
MS.gene63322.t1 AT3G58780 46.479 71 38 0 6 76 14 84 4.41e-14 66.6
MS.gene63322.t1 AT3G58780 46.479 71 38 0 6 76 20 90 4.56e-14 66.6
MS.gene63322.t1 AT1G26310 38.835 103 46 3 9 110 2 88 5.49e-14 66.6
MS.gene63322.t1 AT4G37940 45.588 68 37 0 9 76 2 69 6.43e-14 65.1
MS.gene63322.t1 AT3G58780 46.479 71 38 0 6 76 14 84 7.85e-14 66.2
MS.gene63322.t1 AT4G37940 45.588 68 37 0 9 76 2 69 8.48e-14 65.5
MS.gene63322.t1 AT1G69120 35.714 112 55 3 9 119 2 97 8.66e-14 65.9
MS.gene63322.t1 AT4G37940 45.588 68 37 0 9 76 2 69 9.59e-14 65.5
MS.gene63322.t1 AT3G57230 45.588 68 37 0 9 76 2 69 1.09e-13 65.5
MS.gene63322.t1 AT3G57230 45.588 68 37 0 9 76 2 69 1.09e-13 65.5
MS.gene63322.t1 AT1G69120 35.714 112 55 3 9 119 2 97 1.73e-13 65.1
MS.gene63322.t1 AT3G30260 42.029 69 39 1 9 76 2 70 1.78e-13 65.1
MS.gene63322.t1 AT4G11880 45.833 72 38 1 10 80 3 74 3.07e-13 63.9
MS.gene63322.t1 AT4G11880 45.833 72 38 1 10 80 3 74 3.07e-13 63.9
MS.gene63322.t1 AT1G28460 30.631 111 77 0 6 116 5 115 3.24e-13 63.5
MS.gene63322.t1 AT4G11880 44.595 74 40 1 10 82 3 76 3.35e-13 63.2
MS.gene63322.t1 AT4G11880 44.595 74 40 1 10 82 3 76 3.35e-13 63.2
MS.gene63322.t1 AT5G10140 43.056 72 40 1 9 79 2 73 4.10e-13 62.8
MS.gene63322.t1 AT5G60910 44.928 69 37 1 9 76 2 70 4.26e-13 63.9
MS.gene63322.t1 AT5G10140 43.056 72 40 1 9 79 2 73 4.40e-13 63.2
MS.gene63322.t1 AT5G10140 43.056 72 40 1 9 79 2 73 5.72e-13 63.2
MS.gene63322.t1 AT2G22630 45.588 68 37 0 9 76 2 69 6.02e-13 63.5
MS.gene63322.t1 AT2G22630 45.588 68 37 0 9 76 2 69 6.02e-13 63.5
MS.gene63322.t1 AT5G10140 43.056 72 40 1 9 79 2 73 6.16e-13 62.8
MS.gene63322.t1 AT1G17310 48.649 74 36 1 8 81 47 118 6.89e-13 63.2
MS.gene63322.t1 AT1G17310 46.835 79 40 1 8 86 58 134 9.98e-13 62.8
MS.gene63322.t1 AT2G14210 44.928 69 37 1 9 76 2 70 1.66e-12 62.4
MS.gene63322.t1 AT2G14210 44.928 69 37 1 9 76 2 70 2.12e-12 62.0
MS.gene63322.t1 AT5G15800 46.377 69 36 1 9 76 2 70 2.26e-12 62.0
MS.gene63322.t1 AT5G15800 46.377 69 36 1 9 76 2 70 3.47e-12 61.6
MS.gene63322.t1 AT3G02310 44.928 69 37 1 9 76 2 70 6.50e-12 60.1
MS.gene63322.t1 AT2G03710 50.000 56 28 0 9 64 2 57 9.10e-12 59.7
MS.gene63322.t1 AT5G23260 43.662 71 38 1 9 77 2 72 9.55e-12 60.5
MS.gene63322.t1 AT5G23260 43.662 71 38 1 9 77 18 88 9.88e-12 60.5
MS.gene63322.t1 AT5G23260 43.662 71 38 1 9 77 18 88 9.93e-12 60.5
MS.gene63322.t1 AT5G23260 43.662 71 38 1 9 77 2 72 1.03e-11 60.1
MS.gene63322.t1 AT1G29962 29.565 115 78 2 6 117 5 119 1.41e-11 58.9
MS.gene63322.t1 AT3G58780 45.070 71 32 1 6 76 14 77 1.84e-11 59.7
MS.gene63322.t1 AT1G24260 51.786 56 27 0 9 64 2 57 2.11e-11 59.3
MS.gene63322.t1 AT1G24260 51.786 56 27 0 9 64 2 57 2.15e-11 59.3
MS.gene63322.t1 AT1G24260 51.786 56 27 0 9 64 2 57 2.31e-11 59.3
MS.gene63322.t1 AT2G03710 50.000 56 28 0 9 64 2 57 2.34e-11 59.3
MS.gene63322.t1 AT2G03710 50.000 56 28 0 9 64 2 57 2.42e-11 59.3
MS.gene63322.t1 AT3G58780 47.541 61 32 0 6 66 14 74 2.88e-11 59.3
MS.gene63322.t1 AT3G02310 44.928 69 37 1 9 76 2 70 3.26e-11 58.9
MS.gene63322.t1 AT3G54340 44.444 63 35 0 9 71 2 64 3.46e-11 58.5
MS.gene63322.t1 AT5G65070 40.580 69 40 1 9 76 2 70 4.09e-11 57.0
MS.gene63322.t1 AT5G65050 39.130 69 41 1 9 76 2 70 4.69e-11 57.8
MS.gene63322.t1 AT5G65050 39.130 69 41 1 9 76 2 70 9.38e-11 57.0

Find 17 sgRNAs with CRISPR-Local

Find 26 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCAAGATGCCATTGTTT+TGG 0.345850 3.3:+60043341 None:intergenic
AGCGAGCTTTGCACCCTTTG+TGG 0.386397 3.3:-60043469 MS.gene63322:CDS
CATAAATCGTTATATCTCTC+AGG 0.481105 3.3:-60043371 MS.gene63322:CDS
AGCAACATATGCACCACAAA+GGG 0.521852 3.3:+60043456 None:intergenic
GCATCGTTCATATGAGTCAA+TGG 0.541468 3.3:+60043274 None:intergenic
AATGAGCCTCATTTCGCAGA+TGG 0.559491 3.3:+60043214 None:intergenic
TGGCCACACAAATGTAGAAA+CGG 0.561072 3.3:-60043395 MS.gene63322:CDS
TATATTCTCACCTGGTGAGA+AGG 0.562933 3.3:-60043428 MS.gene63322:CDS
TTTGAGCCATCTGCGAAATG+AGG 0.587155 3.3:-60043220 None:intergenic
TGACCGTTTCTACATTTGTG+TGG 0.593761 3.3:+60043392 None:intergenic
AATGAAAACACCTTCTCACC+AGG 0.598148 3.3:+60043418 None:intergenic
GCTCTGATTATATTCTCACC+TGG 0.608989 3.3:-60043436 MS.gene63322:CDS
CAGGTCCCACCCCAAAACAA+TGG 0.630259 3.3:-60043352 MS.gene63322:CDS
GAGCAACATATGCACCACAA+AGG 0.640810 3.3:+60043455 None:intergenic
TCGAGTCGAATGAAAACTCG+AGG 0.674187 3.3:-60043583 MS.gene63322:CDS
ATGGCTCAAACTCATTACAA+CGG 0.727817 3.3:+60043233 None:intergenic
TGGCATCTTGCAATTCATCG+AGG 0.757727 3.3:-60043332 MS.gene63322:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTTTTTCATCTCAATCTTT+TGG + chr3.3:60043254-60043273 None:intergenic 25.0%
CATAAATCGTTATATCTCTC+AGG - chr3.3:60043437-60043456 MS.gene63322:CDS 30.0%
ATGGCTCAAACTCATTACAA+CGG + chr3.3:60043578-60043597 None:intergenic 35.0%
! ATTGCAAGATGCCATTGTTT+TGG + chr3.3:60043470-60043489 None:intergenic 35.0%
! TTGCAAGATGCCATTGTTTT+GGG + chr3.3:60043469-60043488 None:intergenic 35.0%
AATGAAAACACCTTCTCACC+AGG + chr3.3:60043393-60043412 None:intergenic 40.0%
AGCAACATATGCACCACAAA+GGG + chr3.3:60043355-60043374 None:intergenic 40.0%
GCATCGTTCATATGAGTCAA+TGG + chr3.3:60043537-60043556 None:intergenic 40.0%
GCTCTGATTATATTCTCACC+TGG - chr3.3:60043372-60043391 MS.gene63322:CDS 40.0%
TATATTCTCACCTGGTGAGA+AGG - chr3.3:60043380-60043399 MS.gene63322:CDS 40.0%
TGACCGTTTCTACATTTGTG+TGG + chr3.3:60043419-60043438 None:intergenic 40.0%
TGGCCACACAAATGTAGAAA+CGG - chr3.3:60043413-60043432 MS.gene63322:CDS 40.0%
!! CTATTTTGAAGAGCCCACTA+TGG + chr3.3:60043317-60043336 None:intergenic 40.0%
!! TGCAAGATGCCATTGTTTTG+GGG + chr3.3:60043468-60043487 None:intergenic 40.0%
!!! ACTTTTTCGAAGCTCCATAG+TGG - chr3.3:60043300-60043319 MS.gene63322:CDS 40.0%
!!! CTTTTTCGAAGCTCCATAGT+GGG - chr3.3:60043301-60043320 MS.gene63322:CDS 40.0%
!!! GGTGAGAAGGTGTTTTCATT+TGG - chr3.3:60043393-60043412 MS.gene63322:CDS 40.0%
GAGCAACATATGCACCACAA+AGG + chr3.3:60043356-60043375 None:intergenic 45.0%
GCTTCGAAAAAGTCACTTGC+AGG + chr3.3:60043293-60043312 None:intergenic 45.0%
TCGAGTCGAATGAAAACTCG+AGG - chr3.3:60043225-60043244 MS.gene63322:CDS 45.0%
TGGCATCTTGCAATTCATCG+AGG - chr3.3:60043476-60043495 MS.gene63322:CDS 45.0%
!! GCTTGCTCACTTTTGCGTTA+CGG + chr3.3:60043506-60043525 None:intergenic 45.0%
!!! AAGATGCCATTGTTTTGGGG+TGG + chr3.3:60043465-60043484 None:intergenic 45.0%
!!! AGATGCCATTGTTTTGGGGT+GGG + chr3.3:60043464-60043483 None:intergenic 45.0%
AGCGAGCTTTGCACCCTTTG+TGG - chr3.3:60043339-60043358 MS.gene63322:CDS 55.0%
CAGGTCCCACCCCAAAACAA+TGG - chr3.3:60043456-60043475 MS.gene63322:CDS 55.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 60043222 60043608 60043222 ID=MS.gene63322
chr3.3 mRNA 60043222 60043608 60043222 ID=MS.gene63322.t1;Parent=MS.gene63322
chr3.3 exon 60043222 60043608 60043222 ID=MS.gene63322.t1.exon1;Parent=MS.gene63322.t1
chr3.3 CDS 60043222 60043608 60043222 ID=cds.MS.gene63322.t1;Parent=MS.gene63322.t1
Gene Sequence

>MS.gene63322

ATGTCGAGTCGAATGAAAACTCGAGGTCGCCAAAAGATTGAGATGAAAAAGATGAGAAATGAAAGCAACCTGCAAGTGACTTTTTCGAAGCTCCATAGTGGGCTCTTCAAAATAGCTAGCGAGCTTTGCACCCTTTGTGGTGCATATGTTGCTCTGATTATATTCTCACCTGGTGAGAAGGTGTTTTCATTTGGCCACACAAATGTAGAAACGGTCATAAATCGTTATATCTCTCAGGTCCCACCCCAAAACAATGGCATCTTGCAATTCATCGAGGCATACCGTAACGCAAAAGTGAGCAAGCTCATTGCTCCATTGACTCATATGAACGATGCACTAGACATCGAGAAGAACCGTTGTAATGAGTTTGAGCCATCTGCGAAATGA
Protein sequence

>MS.gene63322.t1

MSSRMKTRGRQKIEMKKMRNESNLQVTFSKLHSGLFKIASELCTLCGAYVALIIFSPGEKVFSFGHTNVETVINRYISQVPPQNNGILQFIEAYRNAKVSKLIAPLTHMNDALDIEKNRCNEFEPSAK