AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63388

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63388.t1 MTR_2g075700 93.548 310 20 0 1 310 1 310 0.0 578
MS.gene63388.t1 MTR_2g075680 78.758 306 58 6 1 299 1 306 1.83e-154 434
MS.gene63388.t1 MTR_2g075690 69.805 308 76 5 1 299 1 300 1.43e-146 414
MS.gene63388.t1 MTR_7g073430 40.711 253 122 4 7 259 6 230 8.66e-55 180
MS.gene63388.t1 MTR_2g075750 51.124 178 79 4 129 305 13 183 5.73e-54 174
MS.gene63388.t1 MTR_2g075610 50.838 179 81 4 126 301 11 185 2.81e-53 173
MS.gene63388.t1 MTR_7g073380 41.102 236 108 5 10 241 10 218 1.97e-51 171
MS.gene63388.t1 MTR_8g005750 40.343 233 95 6 13 241 4 196 7.23e-44 151
MS.gene63388.t1 MTR_0002s1250 37.917 240 106 9 10 240 3 208 1.97e-42 147
MS.gene63388.t1 MTR_8g032510 43.850 187 90 5 56 241 41 213 1.65e-40 143
MS.gene63388.t1 MTR_3g093830 38.554 166 88 3 60 217 49 208 4.68e-28 110
MS.gene63388.t1 MTR_5g067700 29.954 217 107 5 12 224 11 186 5.23e-25 100
MS.gene63388.t1 MTR_8g099350 33.166 199 100 5 17 203 14 191 3.67e-24 101
MS.gene63388.t1 MTR_7g117200 47.674 86 35 2 127 203 93 177 7.85e-20 88.6
MS.gene63388.t1 MTR_3g090860 29.384 211 106 8 13 203 5 192 4.99e-19 86.3
MS.gene63388.t1 MTR_8g027860 43.678 87 40 2 125 203 110 195 3.34e-18 84.3
MS.gene63388.t1 MTR_5g067680 47.561 82 42 1 127 207 184 265 2.35e-16 79.0
MS.gene63388.t1 MTR_2g075640 41.129 124 58 7 8 129 6 116 8.88e-16 72.8
MS.gene63388.t1 MTR_2g075730 40.323 124 59 7 8 129 6 116 2.08e-15 71.6
MS.gene63388.t1 MTR_7g028415 47.561 82 39 2 137 218 86 163 2.39e-14 70.1
MS.gene63388.t1 MTR_7g028710 47.561 82 39 2 137 218 86 163 2.39e-14 70.1
MS.gene63388.t1 MTR_7g079010 38.739 111 53 4 101 209 108 205 5.55e-14 70.1
MS.gene63388.t1 MTR_8g092140 51.667 60 26 1 142 201 158 214 1.02e-13 69.7
MS.gene63388.t1 MTR_3g095080 50.820 61 27 1 142 202 166 223 2.11e-13 68.9
MS.gene63388.t1 MTR_5g073620 36.207 116 60 2 144 245 672 787 2.26e-13 71.2
MS.gene63388.t1 MTR_3g095080 50.820 61 27 1 142 202 142 199 3.04e-13 68.2
MS.gene63388.t1 MTR_7g109800 41.111 90 45 2 113 202 119 200 3.41e-13 69.3
MS.gene63388.t1 MTR_7g100510 29.714 175 103 5 56 215 260 429 3.88e-13 69.7
MS.gene63388.t1 MTR_5g085600 72.093 43 12 0 82 124 11 53 3.99e-13 63.9
MS.gene63388.t1 MTR_4g122530 47.458 59 28 1 143 201 207 262 2.35e-12 67.4
MS.gene63388.t1 MTR_5g043880 39.326 89 48 2 143 228 123 208 3.85e-12 65.9
MS.gene63388.t1 MTR_2g033820 43.243 74 39 1 143 216 202 272 5.60e-12 66.2
MS.gene63388.t1 MTR_1g086790 39.773 88 50 1 115 202 129 213 6.46e-12 65.9
MS.gene63388.t1 MTR_4g094588 49.231 65 30 1 137 201 171 232 6.50e-12 65.9
MS.gene63388.t1 MTR_5g091390 49.153 59 27 1 143 201 156 211 8.80e-12 65.1
MS.gene63388.t1 MTR_8g007270 50.000 60 27 1 142 201 152 208 1.01e-11 63.9
MS.gene63388.t1 MTR_5g042920 33.835 133 73 4 72 201 254 374 3.54e-11 63.9
MS.gene63388.t1 MTR_7g062220 49.231 65 30 1 142 206 122 183 3.73e-11 63.5
MS.gene63388.t1 MTR_4g082580 33.333 141 78 4 104 241 235 362 5.62e-11 63.2
MS.gene63388.t1 MTR_7g011820 46.667 60 29 1 142 201 408 464 6.35e-11 63.2
MS.gene63388.t1 MTR_8g096730 37.778 90 51 2 112 201 40 124 9.81e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63388.t1 AT5G01900 35.751 193 96 5 12 204 6 170 1.55e-23 97.4
MS.gene63388.t1 AT5G22570 34.756 164 85 4 55 217 37 179 1.96e-23 97.8
MS.gene63388.t1 AT1G66600 50.602 83 34 1 143 218 102 184 1.02e-22 94.7
MS.gene63388.t1 AT1G66560 60.294 68 26 1 144 210 103 170 1.08e-22 95.1
MS.gene63388.t1 AT1G66550 42.202 109 56 2 138 239 97 205 1.27e-22 94.7
MS.gene63388.t1 AT1G66550 42.202 109 56 2 138 239 102 210 1.58e-22 94.7
MS.gene63388.t1 AT3G56400 33.654 208 98 9 7 203 1 179 4.24e-21 91.7
MS.gene63388.t1 AT2G40750 31.579 209 121 6 12 205 12 213 2.37e-20 90.5
MS.gene63388.t1 AT2G46400 27.055 292 172 8 12 298 5 260 2.43e-20 89.4
MS.gene63388.t1 AT1G80590 41.748 103 51 2 145 247 86 179 3.84e-20 87.8
MS.gene63388.t1 AT2G40740 28.718 195 124 3 17 203 45 232 1.12e-18 84.7
MS.gene63388.t1 AT4G11070 27.230 213 132 4 1 203 1 200 1.15e-18 85.1
MS.gene63388.t1 AT2G40740 28.718 195 124 3 17 203 54 241 1.40e-18 84.7
MS.gene63388.t1 AT4G23810 28.804 184 104 3 88 244 94 277 2.15e-18 84.3
MS.gene63388.t1 AT4G11070 44.660 103 50 3 101 203 73 168 1.63e-17 81.3
MS.gene63388.t1 AT5G24110 28.646 192 104 4 12 203 14 172 6.29e-17 80.1
MS.gene63388.t1 AT5G49520 50.000 60 27 1 143 202 220 276 3.56e-13 70.1
MS.gene63388.t1 AT2G37260 50.847 59 26 1 143 201 348 403 7.59e-13 68.9
MS.gene63388.t1 AT2G37260 50.847 59 26 1 143 201 268 323 1.09e-12 68.2
MS.gene63388.t1 AT2G37260 50.847 59 26 1 143 201 266 321 1.10e-12 68.2
MS.gene63388.t1 AT2G46130 50.000 66 28 2 137 201 23 84 1.60e-12 63.5
MS.gene63388.t1 AT1G29860 41.111 90 46 3 143 228 135 221 4.14e-12 65.9
MS.gene63388.t1 AT2G44745 49.231 65 30 1 137 201 138 199 4.66e-12 64.7
MS.gene63388.t1 AT1G64000 48.333 60 28 1 142 201 112 168 7.49e-12 63.9
MS.gene63388.t1 AT4G18170 49.153 59 27 1 143 201 171 226 1.16e-11 65.1
MS.gene63388.t1 AT1G69310 45.763 59 29 1 143 201 146 201 1.21e-11 64.7
MS.gene63388.t1 AT1G69310 45.763 59 29 1 143 201 146 201 1.21e-11 64.7
MS.gene63388.t1 AT1G69310 45.763 59 29 1 143 201 146 201 1.21e-11 64.7
MS.gene63388.t1 AT4G39410 48.333 60 28 1 142 201 221 277 1.44e-11 64.7
MS.gene63388.t1 AT2G47260 38.947 95 55 1 115 209 145 236 1.97e-11 64.3
MS.gene63388.t1 AT1G13960 48.333 60 28 1 142 201 407 463 2.83e-11 64.3
MS.gene63388.t1 AT5G46350 47.458 59 28 1 143 201 182 237 3.57e-11 63.5
MS.gene63388.t1 AT5G41570 40.000 75 40 2 137 209 91 162 4.14e-11 61.2
MS.gene63388.t1 AT5G13080 47.541 61 29 1 142 202 65 122 4.15e-11 60.5
MS.gene63388.t1 AT2G03340 48.333 60 28 1 142 201 413 469 4.97e-11 63.5
MS.gene63388.t1 AT1G13960 48.333 60 28 1 142 201 254 310 9.46e-11 62.4

Find 50 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAAGATCTCCAGCAATTA+AGG 0.180671 2.4:-21714047 None:intergenic
TTTGCATTCAGATATAAATT+TGG 0.220659 2.4:+21719220 MS.gene63388:CDS
TTTCTCTTGTTCGACCCTTT+TGG 0.253829 2.4:-21714247 None:intergenic
CTTCAAAGTTACATGATATA+AGG 0.287480 2.4:-21719424 None:intergenic
TTGTACCGGACTACATATTA+TGG 0.339154 2.4:+21719176 MS.gene63388:CDS
ATTGCCTTCTTGCCATTTGT+TGG 0.339828 2.4:-21713905 None:intergenic
GAGAATGTTTATGACCAGTT+AGG 0.367450 2.4:+21719506 MS.gene63388:CDS
TCGCAAATACGAAATATTAC+AGG 0.383126 2.4:+21718755 MS.gene63388:CDS
AGAGTCATCTGATGACAAAA+TGG 0.387666 2.4:-21719246 None:intergenic
AAAGTGTTACCCTTAATTGC+TGG 0.408487 2.4:+21714037 MS.gene63388:CDS
CTGCTTTGGCTTCCAACAAA+TGG 0.408980 2.4:+21713893 MS.gene63388:CDS
ATAACCATCAAAATCCTAAC+TGG 0.409349 2.4:-21719520 None:intergenic
AATATGTAGTCCGGTACAAT+GGG 0.410682 2.4:-21719172 None:intergenic
ATCATCATGGATCTCTTCCT+TGG 0.411162 2.4:-21719366 None:intergenic
GGTCATACTTGGAGAAAGTA+TGG 0.428672 2.4:+21718721 MS.gene63388:CDS
AAATAATGGAGAATCTGCTT+TGG 0.432906 2.4:+21713879 None:intergenic
TAAGGTCAATTTCACCAACT+TGG 0.438783 2.4:+21718668 MS.gene63388:intron
AAAGAGCACCTCAATATTGA+TGG 0.443016 2.4:+21718693 MS.gene63388:CDS
TTTGAAAACAATAATCATCA+TGG 0.449518 2.4:-21719379 None:intergenic
TATAGGAACATCCACATCAT+TGG 0.449623 2.4:-21714128 None:intergenic
TAGATGCAAGCAATGGCAAT+GGG 0.466580 2.4:-21719331 None:intergenic
TGATGGATGACGGTCATACT+TGG 0.468609 2.4:+21718710 MS.gene63388:CDS
ACAAGATCTCCAGCAATTAA+GGG 0.474137 2.4:-21714046 None:intergenic
AAGGTCAATTTCACCAACTT+GGG 0.485800 2.4:+21718669 MS.gene63388:intron
ATGTATGCAGGAGCTACTAT+AGG 0.489699 2.4:+21719084 MS.gene63388:intron
TCATCATGGATCTCTTCCTT+GGG 0.495757 2.4:-21719365 None:intergenic
ATTGCTTGCATCTATAAAAG+AGG 0.517270 2.4:+21719340 MS.gene63388:CDS
GCTTCCAACAAATGGCAAGA+AGG 0.524586 2.4:+21713901 MS.gene63388:CDS
ATGGAAGATGAGCTTATAAG+AGG 0.529331 2.4:+21713926 MS.gene63388:CDS
TAATATGTAGTCCGGTACAA+TGG 0.532746 2.4:-21719173 None:intergenic
AACAAATTGCAACAAGCTTG+AGG 0.544270 2.4:+21714174 MS.gene63388:CDS
AGTCAAATATAGAAGTGAAA+GGG 0.551702 2.4:+21713996 MS.gene63388:CDS
AAGTCAAATATAGAAGTGAA+AGG 0.557104 2.4:+21713995 MS.gene63388:CDS
GATGGCCATAATATGTAGTC+CGG 0.559159 2.4:-21719181 None:intergenic
AACAAATGGCAAGAAGGCAA+TGG 0.559560 2.4:+21713907 MS.gene63388:CDS
ATCTATAAAAGAGGATCCCA+AGG 0.564513 2.4:+21719349 MS.gene63388:CDS
GCAAGCAATGGCAATGGGGA+TGG 0.566740 2.4:-21719326 None:intergenic
AGCAATGGCAATGGGGATGG+TGG 0.576086 2.4:-21719323 None:intergenic
ATAGATGCAAGCAATGGCAA+TGG 0.576792 2.4:-21719332 None:intergenic
TGGCAAAGATTCCAATGATG+TGG 0.594161 2.4:+21714117 MS.gene63388:CDS
ACCGTCATCCATCAATATTG+AGG 0.603320 2.4:-21718701 None:intergenic
TTCAATCGATGATAGCATAG+TGG 0.608625 2.4:-21719471 None:intergenic
ACCTCAATATTGATGGATGA+CGG 0.612256 2.4:+21718700 MS.gene63388:CDS
GCTTATAAGAGGACGTGACA+TGG 0.614104 2.4:+21713937 MS.gene63388:CDS
TATGTAGTCCGGTACAATGG+GGG 0.630727 2.4:-21719170 None:intergenic
ATGTAGTCCGGTACAATGGG+GGG 0.638293 2.4:-21719169 None:intergenic
TGCTGGAGATCTTGTGCGTG+AGG 0.644187 2.4:+21714054 MS.gene63388:CDS
AAATTGCAACAAGCTTGAGG+AGG 0.649400 2.4:+21714177 MS.gene63388:CDS
AGATGCAAGCAATGGCAATG+GGG 0.711242 2.4:-21719330 None:intergenic
ATATGTAGTCCGGTACAATG+GGG 0.727456 2.4:-21719171 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - chr2.4:21715413-21715394 None:intergenic 0.0%
!! ATATATATATATATATATAT+GGG + chr2.4:21715394-21715413 MS.gene63388:intron 0.0%
!! TATATATATATATATATATA+GGG - chr2.4:21715414-21715395 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr2.4:21715395-21715414 MS.gene63388:intron 0.0%
!! AAAATACAAGTATAAAATAA+TGG - chr2.4:21718263-21718282 None:intergenic 10.0%
!! ATAATCATAAACAAATTAAA+TGG - chr2.4:21716568-21716587 None:intergenic 10.0%
!! ATACATAATTATCAATTTAT+GGG + chr2.4:21718521-21718540 MS.gene63388:intron 10.0%
!! ATTGATATATTTATTTGTAT+TGG - chr2.4:21716658-21716677 None:intergenic 10.0%
!! TATATTAAAATTACATGAAT+TGG - chr2.4:21718844-21718863 None:intergenic 10.0%
!! TTATTTCATAAAAAGAAAAA+AGG - chr2.4:21718198-21718217 None:intergenic 10.0%
!!! AAAAACACTAATTTAATTTT+AGG - chr2.4:21714598-21714617 None:intergenic 10.0%
!!! AAATTAGTGTTTTTTTTTAA+GGG + chr2.4:21714604-21714623 MS.gene63388:intron 10.0%
!!! AAATTTTACAAAAAAAAAAG+TGG + chr2.4:21716337-21716356 MS.gene63388:intron 10.0%
!!! ATAATTTTTATTGTTGAAAA+AGG + chr2.4:21716595-21716614 MS.gene63388:intron 10.0%
!!! ATAGTTTATTTATATTTTTC+TGG + chr2.4:21718558-21718577 MS.gene63388:intron 10.0%
!!! TAAATTAGTGTTTTTTTTTA+AGG + chr2.4:21714603-21714622 MS.gene63388:intron 10.0%
!!! TCATGAATAATATTTTTTTT+GGG + chr2.4:21716792-21716811 MS.gene63388:intron 10.0%
!!! TTCATGAATAATATTTTTTT+TGG + chr2.4:21716791-21716810 MS.gene63388:intron 10.0%
!! AAAAAAATCTTCTTTATAGT+TGG - chr2.4:21716200-21716219 None:intergenic 15.0%
!! AAAAAATATTATTCATGAAG+TGG - chr2.4:21716790-21716809 None:intergenic 15.0%
!! AAGTACTAAAAAAATTAGAT+AGG + chr2.4:21717972-21717991 MS.gene63388:intron 15.0%
!! ACCAGAAAAAAAAAAAAATT+AGG - chr2.4:21714541-21714560 None:intergenic 15.0%
!! ACCTAAAAAATTATAATTTG+TGG - chr2.4:21716274-21716293 None:intergenic 15.0%
!! ATATGTATAAAATTATCACA+AGG - chr2.4:21718938-21718957 None:intergenic 15.0%
!! ATTTGATCTAATAGATTATA+TGG + chr2.4:21714916-21714935 MS.gene63388:intron 15.0%
!! CATACATAATTATCAATTTA+TGG + chr2.4:21718520-21718539 MS.gene63388:intron 15.0%
!! CTTCAAAACTATTAATTAAT+TGG + chr2.4:21719057-21719076 MS.gene63388:intron 15.0%
!! TAATCTCTAACAAAAAATTA+AGG + chr2.4:21716375-21716394 MS.gene63388:intron 15.0%
!! TCTTTCCTAAAATTAAATTA+GGG - chr2.4:21717899-21717918 None:intergenic 15.0%
!! TTCTTTCCTAAAATTAAATT+AGG - chr2.4:21717900-21717919 None:intergenic 15.0%
!!! AAAAATGAGTTTAATTTACT+AGG + chr2.4:21716939-21716958 MS.gene63388:intron 15.0%
!!! AAGAACAAGTTTTTATTTTA+TGG + chr2.4:21717915-21717934 MS.gene63388:intron 15.0%
!!! CATGAATAATATTTTTTTTG+GGG + chr2.4:21716793-21716812 MS.gene63388:intron 15.0%
!!! CCTAAAAAATTATAATTTGT+GGG - chr2.4:21716273-21716292 None:intergenic 15.0%
!!! TCCTAATTTTTTTTTTTTTC+TGG + chr2.4:21714537-21714556 MS.gene63388:intron 15.0%
!!! TTATTGTTTTCAAAATCAAT+TGG + chr2.4:21719388-21719407 MS.gene63388:CDS 15.0%
!!! TTTTGCAACTAAATTTATTT+GGG + chr2.4:21716715-21716734 MS.gene63388:intron 15.0%
!!! TTTTTGCAACTAAATTTATT+TGG + chr2.4:21716714-21716733 MS.gene63388:intron 15.0%
!! AAAAAAAGGGTTTGTAAAAA+TGG - chr2.4:21714744-21714763 None:intergenic 20.0%
!! AAAACTTCTTGTTAAATTTC+TGG - chr2.4:21714667-21714686 None:intergenic 20.0%
!! AAATAAGGTCTATTAATTAG+AGG - chr2.4:21715977-21715996 None:intergenic 20.0%
!! AACATATATAATATCATAGG+TGG - chr2.4:21717127-21717146 None:intergenic 20.0%
!! AATAAGGTCTATTAATTAGA+GGG - chr2.4:21715976-21715995 None:intergenic 20.0%
!! ACTAAAAAAATTAGATAGGA+TGG + chr2.4:21717976-21717995 MS.gene63388:intron 20.0%
!! AGACAATTATTGATGAAATT+GGG - chr2.4:21716477-21716496 None:intergenic 20.0%
!! AGCTCAATGTTTATTATTTA+GGG + chr2.4:21716740-21716759 MS.gene63388:intron 20.0%
!! ATATATATAAGAAGGCTTAA+CGG + chr2.4:21715888-21715907 MS.gene63388:intron 20.0%
!! ATGAAATAAAAACTTGAGTT+TGG + chr2.4:21718209-21718228 MS.gene63388:intron 20.0%
!! CATTGTCATAACAATAATTA+GGG - chr2.4:21717868-21717887 None:intergenic 20.0%
!! GAAAAATCTTTAACACTTAT+AGG - chr2.4:21714148-21714167 None:intergenic 20.0%
!! GACTAAAATTAACAAATCTT+AGG + chr2.4:21716397-21716416 MS.gene63388:intron 20.0%
!! GCAAACATATATAATATCAT+AGG - chr2.4:21717130-21717149 None:intergenic 20.0%
!! GTATAAAAGAATGAAAAGAT+TGG - chr2.4:21718308-21718327 None:intergenic 20.0%
!! TAAAAAACTGAGACAAAAAT+TGG - chr2.4:21716317-21716336 None:intergenic 20.0%
!! TAGCTCAATGTTTATTATTT+AGG + chr2.4:21716739-21716758 MS.gene63388:intron 20.0%
!! TCACAAATAGATTAAAGATA+AGG + chr2.4:21716074-21716093 MS.gene63388:intron 20.0%
!! TCATTCAGAGATTAAAAATA+AGG - chr2.4:21715992-21716011 None:intergenic 20.0%
!! TCATTGTCATAACAATAATT+AGG - chr2.4:21717869-21717888 None:intergenic 20.0%
!! TCTTTAATCTATTTGTGATT+TGG - chr2.4:21716072-21716091 None:intergenic 20.0%
!! TTGGAAAACATAAAAATGAT+AGG + chr2.4:21714490-21714509 MS.gene63388:intron 20.0%
!! TTTGAAAACAATAATCATCA+TGG - chr2.4:21719382-21719401 None:intergenic 20.0%
!! TTTGCATTCAGATATAAATT+TGG + chr2.4:21719220-21719239 MS.gene63388:CDS 20.0%
!!! AAGAACCCTAATTTAATTTT+AGG + chr2.4:21717891-21717910 MS.gene63388:intron 20.0%
!!! AAGTATACTTTTGTTTTGTT+AGG - chr2.4:21718348-21718367 None:intergenic 20.0%
!!! AATCTAAAGTCAAATATAGT+AGG - chr2.4:21714951-21714970 None:intergenic 20.0%
!!! AATTGATAATTATGTATGTC+TGG - chr2.4:21718518-21718537 None:intergenic 20.0%
!!! AGTATACTTTTGTTTTGTTA+GGG - chr2.4:21718347-21718366 None:intergenic 20.0%
!!! ATTTCTTTTGATGTCAATTT+TGG - chr2.4:21718102-21718121 None:intergenic 20.0%
!!! CATAACTCTTTTTTTTTAAC+TGG - chr2.4:21714361-21714380 None:intergenic 20.0%
!!! CCCACAAATTATAATTTTTT+AGG + chr2.4:21716270-21716289 MS.gene63388:intron 20.0%
!!! CTATTTTTGTCAATTGATTA+AGG + chr2.4:21718594-21718613 MS.gene63388:intron 20.0%
!!! TACTATATTTGACTTTAGAT+TGG + chr2.4:21714950-21714969 MS.gene63388:intron 20.0%
!!! TTCTCTTTTACTTAAATCTT+CGG + chr2.4:21717351-21717370 MS.gene63388:intron 20.0%
! AACATAAAAATGATAGGTGA+AGG + chr2.4:21714496-21714515 MS.gene63388:intron 25.0%
! AAGAAACTTCGTATAAAACA+TGG - chr2.4:21714287-21714306 None:intergenic 25.0%
! AAGTCAAATATAGAAGTGAA+AGG + chr2.4:21713995-21714014 MS.gene63388:CDS 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - chr2.4:21717221-21717240 None:intergenic 25.0%
! AATATTATTCATGAAGTGGT+CGG - chr2.4:21716786-21716805 None:intergenic 25.0%
! ACATAAAAATGATAGGTGAA+GGG + chr2.4:21714497-21714516 MS.gene63388:intron 25.0%
! AGTCAAATATAGAAGTGAAA+GGG + chr2.4:21713996-21714015 MS.gene63388:CDS 25.0%
! ATAAGGTCTATTAATTAGAG+GGG - chr2.4:21715975-21715994 None:intergenic 25.0%
! CAGACAATTATTGATGAAAT+TGG - chr2.4:21716478-21716497 None:intergenic 25.0%
! CTGATGAATGAATAAAATGT+TGG + chr2.4:21715153-21715172 MS.gene63388:intron 25.0%
! CTTAAGTATGAAGACAAAAA+AGG - chr2.4:21718652-21718671 None:intergenic 25.0%
! CTTCAAAGTTACATGATATA+AGG - chr2.4:21719427-21719446 None:intergenic 25.0%
! GCAAGTAAATAACTAAAAAG+TGG - chr2.4:21715502-21715521 None:intergenic 25.0%
! TAAAATCTTAACTGGATGAT+AGG - chr2.4:21714425-21714444 None:intergenic 25.0%
! TAAAATGTTGGATATAAGAG+AGG + chr2.4:21715165-21715184 MS.gene63388:intron 25.0%
! TTAGATTAGGTATAACTCAA+CGG + chr2.4:21715940-21715959 MS.gene63388:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + chr2.4:21717233-21717252 MS.gene63388:intron 25.0%
!! AAACCTTATTTCATCAAATG+TGG + chr2.4:21715039-21715058 MS.gene63388:intron 25.0%
!! AACCTTATTTCATCAAATGT+GGG + chr2.4:21715040-21715059 MS.gene63388:intron 25.0%
!! AACGAGTTTTCTTCTTTAAT+TGG - chr2.4:21719302-21719321 None:intergenic 25.0%
!! CAACATTTTATTCATTCATC+AGG - chr2.4:21715155-21715174 None:intergenic 25.0%
!! TATATGTAACTTTGACTTTG+AGG - chr2.4:21718047-21718066 None:intergenic 25.0%
!! TTAATTGGTAATATGTATGC+AGG + chr2.4:21719072-21719091 MS.gene63388:intron 25.0%
!!! AATAGAGGTGTTTATAAGTA+GGG - chr2.4:21714835-21714854 None:intergenic 25.0%
!!! ATGTCTGTATCCTTTTATTT+TGG + chr2.4:21718392-21718411 MS.gene63388:intron 25.0%
!!! CATTACAAGCAAGTTTTATA+AGG - chr2.4:21714987-21715006 None:intergenic 25.0%
!!! CTTTTTTGTCTTCATACTTA+AGG + chr2.4:21718650-21718669 MS.gene63388:intron 25.0%
!!! GTATACTTTTGTTTTGTTAG+GGG - chr2.4:21718346-21718365 None:intergenic 25.0%
!!! TAATAGAGGTGTTTATAAGT+AGG - chr2.4:21714836-21714855 None:intergenic 25.0%
!!! TATACTTTTGTTTTGTTAGG+GGG - chr2.4:21718345-21718364 None:intergenic 25.0%
!!! TTGTATTGGTTTGATACTTT+CGG - chr2.4:21716644-21716663 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + chr2.4:21717220-21717239 MS.gene63388:intron 25.0%
!!! TTTTGGGTAGAATTTAGATT+AGG + chr2.4:21715927-21715946 MS.gene63388:intron 25.0%
AAAACAATGGAGAGAGAAAA+AGG + chr2.4:21717246-21717265 MS.gene63388:intron 30.0%
AAACACCTCTATTATGTCTA+TGG + chr2.4:21714842-21714861 MS.gene63388:intron 30.0%
AAACGACATGTATTGTGAAA+CGG + chr2.4:21717764-21717783 MS.gene63388:intron 30.0%
AAATCGCTATTTAGAAACGT+TGG + chr2.4:21716432-21716451 MS.gene63388:intron 30.0%
AAATGGAAATAGAACACAGA+AGG - chr2.4:21714727-21714746 None:intergenic 30.0%
AATCGCTATTTAGAAACGTT+GGG + chr2.4:21716433-21716452 MS.gene63388:intron 30.0%
AATGGAAATAGAACACAGAA+GGG - chr2.4:21714726-21714745 None:intergenic 30.0%
ACCTTCTAACAAAAACAAGT+GGG - chr2.4:21715593-21715612 None:intergenic 30.0%
ATCCCACATTTGATGAAATA+AGG - chr2.4:21715045-21715064 None:intergenic 30.0%
ATCTAAATTCTACCCAAAAC+TGG - chr2.4:21715926-21715945 None:intergenic 30.0%
ATGACATTTCACCAACTTAT+AGG - chr2.4:21715376-21715395 None:intergenic 30.0%
ATTGCTTGCATCTATAAAAG+AGG + chr2.4:21719340-21719359 MS.gene63388:CDS 30.0%
CTTAACCACTTATACTTGAA+AGG - chr2.4:21715123-21715142 None:intergenic 30.0%
GTCTAAAAGTTGTCAAAAAG+TGG + chr2.4:21717313-21717332 MS.gene63388:intron 30.0%
TATTCATTCATCAGGAATGT+GGG - chr2.4:21715147-21715166 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG - chr2.4:21717195-21717214 None:intergenic 30.0%
TCAACACCAAAAATCCAAAA+GGG + chr2.4:21714233-21714252 MS.gene63388:CDS 30.0%
TCGCAAATACGAAATATTAC+AGG + chr2.4:21718755-21718774 MS.gene63388:CDS 30.0%
TCTATCGAAATCGAATTGTA+AGG + chr2.4:21714799-21714818 MS.gene63388:intron 30.0%
TGGATAATTCATGTGAGATA+GGG + chr2.4:21718229-21718248 MS.gene63388:intron 30.0%
TTACAATCGCAACTCAATTT+CGG + chr2.4:21717402-21717421 MS.gene63388:intron 30.0%
TTATAGCAACATACACCTTA+GGG + chr2.4:21715616-21715635 MS.gene63388:intron 30.0%
TTATTCATTCATCAGGAATG+TGG - chr2.4:21715148-21715167 None:intergenic 30.0%
TTGGATAATTCATGTGAGAT+AGG + chr2.4:21718228-21718247 MS.gene63388:intron 30.0%
! AAATCGAATACTTTGAAGAG+AGG + chr2.4:21718118-21718137 MS.gene63388:intron 30.0%
! AATAGCTTTTACAAGTGTGA+TGG - chr2.4:21719202-21719221 None:intergenic 30.0%
! AATCGAATACTTTGAAGAGA+GGG + chr2.4:21718119-21718138 MS.gene63388:intron 30.0%
! AATGCTAATGAACGTCTTTT+GGG + chr2.4:21717940-21717959 MS.gene63388:intron 30.0%
! ACACTTTTACTCTTGAACAA+TGG + chr2.4:21714097-21714116 MS.gene63388:CDS 30.0%
! AGATTTACCAAACCAGTTTT+GGG + chr2.4:21715911-21715930 MS.gene63388:intron 30.0%
! CATCCAGTTAAGATTTTAGA+GGG + chr2.4:21714427-21714446 MS.gene63388:intron 30.0%
! TCATCCAGTTAAGATTTTAG+AGG + chr2.4:21714426-21714445 MS.gene63388:intron 30.0%
! TCTTTTATAGATGCAAGCAA+TGG - chr2.4:21719341-21719360 None:intergenic 30.0%
! TCTTTTGATGTCAATTTTGG+TGG - chr2.4:21718099-21718118 None:intergenic 30.0%
! TGTTTATTATTTAGGGTAGC+TGG + chr2.4:21716747-21716766 MS.gene63388:intron 30.0%
!! ACAAGCAAGTTTTATAAGGT+AGG - chr2.4:21714983-21715002 None:intergenic 30.0%
!! CAAGCAAGTTTTATAAGGTA+GGG - chr2.4:21714982-21715001 None:intergenic 30.0%
!! TTAATTGGTGGTGAAAGTAT+TGG - chr2.4:21716879-21716898 None:intergenic 30.0%
!! TTTCCCTCTAAAATCTTAAC+TGG - chr2.4:21714433-21714452 None:intergenic 30.0%
!!! ACATCCACTAGTTTTTATGT+GGG - chr2.4:21715792-21715811 None:intergenic 30.0%
!!! CATTTTTTCGTATGAGTGAA+GGG - chr2.4:21716926-21716945 None:intergenic 30.0%
!!! TCATTTTTTCGTATGAGTGA+AGG - chr2.4:21716927-21716946 None:intergenic 30.0%
!!! TGATGCCAAACTTCTTTTTT+TGG + chr2.4:21714560-21714579 MS.gene63388:intron 30.0%
AAAGGATCAAATTCTACTCG+AGG - chr2.4:21718472-21718491 None:intergenic 35.0%
AAATCAAAGAGTGAGAGTTG+TGG - chr2.4:21717080-21717099 None:intergenic 35.0%
AACAAATTGCAACAAGCTTG+AGG + chr2.4:21714174-21714193 MS.gene63388:CDS 35.0%
AAGGTCAATTTCACCAACTT+GGG + chr2.4:21718669-21718688 MS.gene63388:intron 35.0%
AAGTGGTTAAATACACCCTA+AGG - chr2.4:21715634-21715653 None:intergenic 35.0%
AAGTGGTTAATTACACCCTA+AGG - chr2.4:21715485-21715504 None:intergenic 35.0%
AATATGTAGTCCGGTACAAT+GGG - chr2.4:21719175-21719194 None:intergenic 35.0%
AATCAAAGAGTGAGAGTTGT+GGG - chr2.4:21717079-21717098 None:intergenic 35.0%
AATGTTGGATATAAGAGAGG+TGG + chr2.4:21715168-21715187 MS.gene63388:intron 35.0%
AATTCTACCCAAAACTGGTT+TGG - chr2.4:21715921-21715940 None:intergenic 35.0%
ACAAGATCTCCAGCAATTAA+GGG - chr2.4:21714049-21714068 None:intergenic 35.0%
ACATAGTATTCCGTTCATCA+TGG + chr2.4:21717794-21717813 MS.gene63388:intron 35.0%
ACTCCCACATAAAAACTAGT+GGG + chr2.4:21715528-21715547 MS.gene63388:intron 35.0%
ACTCGCACATAAAAACTAGT+GGG - chr2.4:21715445-21715464 None:intergenic 35.0%
AGACATATTCCCTAACGAAA+GGG - chr2.4:21718378-21718397 None:intergenic 35.0%
AGAGTCATCTGATGACAAAA+TGG - chr2.4:21719249-21719268 None:intergenic 35.0%
AGCATTAGCACAACTTTGAA+TGG + chr2.4:21718066-21718085 MS.gene63388:intron 35.0%
AGCTCGCAAAAAATTTATGC+AGG + chr2.4:21716172-21716191 MS.gene63388:intron 35.0%
ATAATTTGACCGTCCACTTA+AGG + chr2.4:21718020-21718039 MS.gene63388:intron 35.0%
ATAGTTCCAATACCCTTGTA+AGG - chr2.4:21715285-21715304 None:intergenic 35.0%
ATCTATAAAAGAGGATCCCA+AGG + chr2.4:21719349-21719368 MS.gene63388:CDS 35.0%
ATGGAAGATGAGCTTATAAG+AGG + chr2.4:21713926-21713945 MS.gene63388:CDS 35.0%
ATTGGAACTATGATTCGACT+TGG + chr2.4:21715294-21715313 MS.gene63388:intron 35.0%
CACCACCAAAAAAAGAAGTT+TGG - chr2.4:21714568-21714587 None:intergenic 35.0%
CACCTTCTAACAAAAACAAG+TGG - chr2.4:21715594-21715613 None:intergenic 35.0%
CAGATCATGTTTCAGATGTT+CGG - chr2.4:21714868-21714887 None:intergenic 35.0%
CAGCACATCTCCAAAATAAA+AGG - chr2.4:21718405-21718424 None:intergenic 35.0%
CTCAACACCAAAAATCCAAA+AGG + chr2.4:21714232-21714251 MS.gene63388:CDS 35.0%
CTCGCAAAAAATTTATGCAG+GGG + chr2.4:21716174-21716193 MS.gene63388:intron 35.0%
GAAGGGAGTTTACTTATGAA+AGG - chr2.4:21714709-21714728 None:intergenic 35.0%
GAGAATGTTTATGACCAGTT+AGG + chr2.4:21719506-21719525 MS.gene63388:CDS 35.0%
GCTCGCAAAAAATTTATGCA+GGG + chr2.4:21716173-21716192 MS.gene63388:intron 35.0%
GTTATAGCAACATACACCTT+AGG + chr2.4:21715615-21715634 MS.gene63388:intron 35.0%
TAAGGTCAATTTCACCAACT+TGG + chr2.4:21718668-21718687 MS.gene63388:intron 35.0%
TAATATGTAGTCCGGTACAA+TGG - chr2.4:21719176-21719195 None:intergenic 35.0%
TAGTTCCAATACCCTTGTAA+GGG - chr2.4:21715284-21715303 None:intergenic 35.0%
TATACGATCCACAATACAGT+GGG + chr2.4:21717477-21717496 MS.gene63388:intron 35.0%
TATAGGAACATCCACATCAT+TGG - chr2.4:21714131-21714150 None:intergenic 35.0%
TCAATAAACCCACTGTATTG+TGG - chr2.4:21717488-21717507 None:intergenic 35.0%
TGTGTTCTAGCAAATCCTAT+AGG - chr2.4:21715570-21715589 None:intergenic 35.0%
TTATACGATCCACAATACAG+TGG + chr2.4:21717476-21717495 MS.gene63388:intron 35.0%
TTCAATCGATGATAGCATAG+TGG - chr2.4:21719474-21719493 None:intergenic 35.0%
TTGTACCGGACTACATATTA+TGG + chr2.4:21719176-21719195 MS.gene63388:CDS 35.0%
TTTAATAGAGCTGAGTGTGA+GGG + chr2.4:21716013-21716032 MS.gene63388:intron 35.0%
TTTAGCAAAGCTACACCTTA+GGG + chr2.4:21715467-21715486 MS.gene63388:intron 35.0%
! AAAGTGTTACCCTTAATTGC+TGG + chr2.4:21714037-21714056 MS.gene63388:CDS 35.0%
! AAGCGACAAGTATTGTGAAA+CGG - chr2.4:21717532-21717551 None:intergenic 35.0%
! ACCTCAATATTGATGGATGA+CGG + chr2.4:21718700-21718719 MS.gene63388:CDS 35.0%
! AGGGTGATAAGAGCTTTAAT+TGG - chr2.4:21716894-21716913 None:intergenic 35.0%
! ATCTGAAACATGATCTGAGT+CGG + chr2.4:21714871-21714890 MS.gene63388:intron 35.0%
! CGCTGCTAAGTCTTTTTAAA+TGG + chr2.4:21718998-21719017 MS.gene63388:intron 35.0%
! GAATGCTAATGAACGTCTTT+TGG + chr2.4:21717939-21717958 MS.gene63388:intron 35.0%
! GAGATTTACCAAACCAGTTT+TGG + chr2.4:21715910-21715929 MS.gene63388:intron 35.0%
! GTGATAAGAGCTTTAATTGG+TGG - chr2.4:21716891-21716910 None:intergenic 35.0%
! TATCTCCACCCAAAAGTATA+TGG - chr2.4:21715195-21715214 None:intergenic 35.0%
! TATTGGGTTTCAAGTGTGAT+TGG + chr2.4:21715335-21715354 MS.gene63388:intron 35.0%
! TCTTTTGAACTCCCTTACAA+GGG + chr2.4:21715270-21715289 MS.gene63388:intron 35.0%
! TGTTGCCTTTCAAGTATAAG+TGG + chr2.4:21715115-21715134 MS.gene63388:intron 35.0%
! TTCTTTTGAACTCCCTTACA+AGG + chr2.4:21715269-21715288 MS.gene63388:intron 35.0%
! TTTTAGCAAAGCTACACCTT+AGG + chr2.4:21715466-21715485 MS.gene63388:intron 35.0%
!! AAAGAGCACCTCAATATTGA+TGG + chr2.4:21718693-21718712 MS.gene63388:CDS 35.0%
!! ATGGTGATAAGAGCGTTAAT+TGG - chr2.4:21717054-21717073 None:intergenic 35.0%
!! GTGGTGAAAGTATTGTAGTT+TGG - chr2.4:21717032-21717051 None:intergenic 35.0%
!! TAGGTGGAAAAGTGTTTGAA+AGG - chr2.4:21717111-21717130 None:intergenic 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG - chr2.4:21715458-21715439 None:intergenic 35.0%
!!! ACCCACTTGTTTTTGTTAGA+AGG + chr2.4:21715589-21715608 MS.gene63388:intron 35.0%
!!! CACATCCACTAGTTTTTATG+TGG - chr2.4:21715793-21715812 None:intergenic 35.0%
!!! GGAGTGTTTTAGCAATATGT+GGG - chr2.4:21715683-21715702 None:intergenic 35.0%
!!! TATTTTTTTTGGGGTAGCCA+AGG + chr2.4:21716802-21716821 MS.gene63388:intron 35.0%
!!! TGCCAAACTTCTTTTTTTGG+TGG + chr2.4:21714563-21714582 MS.gene63388:intron 35.0%
!!! TGGTGAAAGTATTGGAGTTT+TGG - chr2.4:21716871-21716890 None:intergenic 35.0%
AAATTGCAACAAGCTTGAGG+AGG + chr2.4:21714177-21714196 MS.gene63388:CDS 40.0%
AACAAATGGCAAGAAGGCAA+TGG + chr2.4:21713907-21713926 MS.gene63388:CDS 40.0%
ACCGTCATCCATCAATATTG+AGG - chr2.4:21718704-21718723 None:intergenic 40.0%
AGAGAGAAAAAGGTAGAGAG+AGG + chr2.4:21717256-21717275 MS.gene63388:intron 40.0%
ATAGATGCAAGCAATGGCAA+TGG - chr2.4:21719335-21719354 None:intergenic 40.0%
ATATGTAGTCCGGTACAATG+GGG - chr2.4:21719174-21719193 None:intergenic 40.0%
ATCATCATGGATCTCTTCCT+TGG - chr2.4:21719369-21719388 None:intergenic 40.0%
ATGTATGCAGGAGCTACTAT+AGG + chr2.4:21719084-21719103 MS.gene63388:intron 40.0%
CACAAGATCTCCAGCAATTA+AGG - chr2.4:21714050-21714069 None:intergenic 40.0%
CACTCCCACATAAAAACTAG+TGG + chr2.4:21715527-21715546 MS.gene63388:intron 40.0%
CACTCGCACATAAAAACTAG+TGG - chr2.4:21715446-21715465 None:intergenic 40.0%
CAGACATATTCCCTAACGAA+AGG - chr2.4:21718379-21718398 None:intergenic 40.0%
CCTTACAACTCAGTCATGTA+AGG + chr2.4:21716128-21716147 MS.gene63388:intron 40.0%
CCTTACATGACTGAGTTGTA+AGG - chr2.4:21716131-21716150 None:intergenic 40.0%
CTTTAATAGAGCTGAGTGTG+AGG + chr2.4:21716012-21716031 MS.gene63388:intron 40.0%
GACATGTATTGTGAAACGGA+GGG + chr2.4:21717768-21717787 MS.gene63388:intron 40.0%
GAGATGTGCTGTACACTTAA+AGG + chr2.4:21718414-21718433 MS.gene63388:intron 40.0%
GATGGCCATAATATGTAGTC+CGG - chr2.4:21719184-21719203 None:intergenic 40.0%
GATTAGGTATAACTCAACGG+TGG + chr2.4:21715943-21715962 MS.gene63388:intron 40.0%
GGTCATACTTGGAGAAAGTA+TGG + chr2.4:21718721-21718740 MS.gene63388:CDS 40.0%
GTGTTCTAGCAAATGCCTAT+AGG + chr2.4:21715552-21715571 MS.gene63388:intron 40.0%
TAGATGCAAGCAATGGCAAT+GGG - chr2.4:21719334-21719353 None:intergenic 40.0%
TAGCTGTGCTGCAGATTAAA+AGG - chr2.4:21718490-21718509 None:intergenic 40.0%
TCATCATGGATCTCTTCCTT+GGG - chr2.4:21719368-21719387 None:intergenic 40.0%
TGGCAAAGATTCCAATGATG+TGG + chr2.4:21714117-21714136 MS.gene63388:CDS 40.0%
TTAGCTAGAGCCATGATGAA+CGG - chr2.4:21717807-21717826 None:intergenic 40.0%
TTCGGCCATAGACATAATAG+AGG - chr2.4:21714850-21714869 None:intergenic 40.0%
TTGTCAGTACCCTTTCGTTA+GGG + chr2.4:21718366-21718385 MS.gene63388:intron 40.0%
! AAGCTTGAGGAGGATTTTGA+TGG + chr2.4:21714187-21714206 MS.gene63388:CDS 40.0%
! AGAGGTGGACCATATACTTT+TGG + chr2.4:21715183-21715202 MS.gene63388:intron 40.0%
! ATTGCCTTCTTGCCATTTGT+TGG - chr2.4:21713908-21713927 None:intergenic 40.0%
! GAGGTGGACCATATACTTTT+GGG + chr2.4:21715184-21715203 MS.gene63388:intron 40.0%
! GTTCGACCCTTTTGGATTTT+TGG - chr2.4:21714242-21714261 None:intergenic 40.0%
! TTTCTCTTGTTCGACCCTTT+TGG - chr2.4:21714250-21714269 None:intergenic 40.0%
! TTTTGGATGAGCTTAACCAG+GGG - chr2.4:21716854-21716873 None:intergenic 40.0%
!! GAGTATTGGATCCTGGTATT+GGG + chr2.4:21715319-21715338 MS.gene63388:intron 40.0%
!! GTGATAAGAGCGTTAATTGG+TGG - chr2.4:21717051-21717070 None:intergenic 40.0%
!! GTTTTGGATGAGCTTAACCA+GGG - chr2.4:21716855-21716874 None:intergenic 40.0%
!! TGATCTGAGTCGGTTGATAA+CGG + chr2.4:21714881-21714900 MS.gene63388:intron 40.0%
!! TTGACTTTGAGGTCCTTAAG+TGG - chr2.4:21718036-21718055 None:intergenic 40.0%
!!! ACTTTTGTTTTGTTAGGGGG+AGG - chr2.4:21718342-21718361 None:intergenic 40.0%
!!! AGTTTTGGATGAGCTTAACC+AGG - chr2.4:21716856-21716875 None:intergenic 40.0%
!!! CACAATACTTGTCGCTTTTG+AGG + chr2.4:21717535-21717554 MS.gene63388:intron 40.0%
!!! CACACCCACTAGTTTTTATG+TGG - chr2.4:21715457-21715438 None:intergenic 40.0%
!!! CTTTTGTTTTGTTAGGGGGA+GGG - chr2.4:21718341-21718360 None:intergenic 40.0%
!!! GGGAGTGTTTTAGCAATATG+TGG - chr2.4:21715684-21715703 None:intergenic 40.0%
!!! TTTTGTTTTGTTAGGGGGAG+GGG - chr2.4:21718340-21718359 None:intergenic 40.0%
AGATGCAAGCAATGGCAATG+GGG - chr2.4:21719333-21719352 None:intergenic 45.0%
AGGTATAACTCAACGGTGGA+TGG + chr2.4:21715947-21715966 MS.gene63388:intron 45.0%
CACACTCAAGTACAGACATC+TGG + chr2.4:21715081-21715100 MS.gene63388:intron 45.0%
CACACTTGAAACCCAATACC+AGG - chr2.4:21715333-21715352 None:intergenic 45.0%
CACCAACTTATAGGCGATGT+GGG - chr2.4:21715367-21715386 None:intergenic 45.0%
CGACATGTATTGTGAAACGG+AGG + chr2.4:21717767-21717786 MS.gene63388:intron 45.0%
CTCTTGTGGTACTTGAGCAT+TGG + chr2.4:21715227-21715246 MS.gene63388:intron 45.0%
CTTGTCAGTACCCTTTCGTT+AGG + chr2.4:21718365-21718384 MS.gene63388:intron 45.0%
GCTTATAAGAGGACGTGACA+TGG + chr2.4:21713937-21713956 MS.gene63388:CDS 45.0%
GCTTCCAACAAATGGCAAGA+AGG + chr2.4:21713901-21713920 MS.gene63388:CDS 45.0%
GTCTGTACTTGAGTGTGAGA+GGG - chr2.4:21715078-21715097 None:intergenic 45.0%
TATGTAGTCCGGTACAATGG+GGG - chr2.4:21719173-21719192 None:intergenic 45.0%
TCACCAACTTATAGGCGATG+TGG - chr2.4:21715368-21715387 None:intergenic 45.0%
TCGTATGAGTGAAGGGTTGT+GGG - chr2.4:21716919-21716938 None:intergenic 45.0%
TGCTCAAGTACCACAAGAGA+CGG - chr2.4:21715226-21715245 None:intergenic 45.0%
TGGCTGCTATATTGGGATTG+CGG - chr2.4:21717449-21717468 None:intergenic 45.0%
TGTCTGTACTTGAGTGTGAG+AGG - chr2.4:21715079-21715098 None:intergenic 45.0%
TTCGTATGAGTGAAGGGTTG+TGG - chr2.4:21716920-21716939 None:intergenic 45.0%
! CTGCTTTGGCTTCCAACAAA+TGG + chr2.4:21713893-21713912 MS.gene63388:CDS 45.0%
! GAACTCCCTTACAAGGGTAT+TGG + chr2.4:21715276-21715295 MS.gene63388:intron 45.0%
! GTGGACCATATACTTTTGGG+TGG + chr2.4:21715187-21715206 MS.gene63388:intron 45.0%
! TGATGGATGACGGTCATACT+TGG + chr2.4:21718710-21718729 MS.gene63388:CDS 45.0%
!! CTTTGAGGTCCTTAAGTGGA+CGG - chr2.4:21718032-21718051 None:intergenic 45.0%
!! GATTCGACTTGGTGGAGTAT+TGG + chr2.4:21715305-21715324 MS.gene63388:intron 45.0%
!! GGAACTATGATTCGACTTGG+TGG + chr2.4:21715297-21715316 MS.gene63388:intron 45.0%
!! GGAGTATTGGATCCTGGTAT+TGG + chr2.4:21715318-21715337 MS.gene63388:intron 45.0%
!! TTTGAAGAGAGGGCATTCCA+TGG + chr2.4:21718129-21718148 MS.gene63388:intron 45.0%
!!! TTTGTTTTGTTAGGGGGAGG+GGG - chr2.4:21718339-21718358 None:intergenic 45.0%
!! AAAAAAACATATTAAATTTA+AGG + chr2.4:21716229-21716248 MS.gene63388:intron 5.0%
!! ATATATATATATATATAAGA+AGG + chr2.4:21715880-21715899 MS.gene63388:intron 5.0%
!! ATATATATATATATATATAG+GGG - chr2.4:21715826-21715845 None:intergenic 5.0%
!! TATATATATATATATATATG+GGG + chr2.4:21715405-21715424 MS.gene63388:intron 5.0%
!!! ATATACTTTTAATAAAAAAA+GGG - chr2.4:21714757-21714776 None:intergenic 5.0%
!!! TATATACTTTTAATAAAAAA+AGG - chr2.4:21714758-21714777 None:intergenic 5.0%
!!! TATTTTATTTAATTGTTTAT+TGG + chr2.4:21714471-21714490 MS.gene63388:intron 5.0%
AAGAGAACCCCCCATTGTAC+CGG + chr2.4:21719162-21719181 MS.gene63388:CDS 50.0%
ACGTGACGTGGCTGCTATAT+TGG - chr2.4:21717457-21717476 None:intergenic 50.0%
ATGTAGTCCGGTACAATGGG+GGG - chr2.4:21719172-21719191 None:intergenic 50.0%
CGTGACGTGGCTGCTATATT+GGG - chr2.4:21717456-21717475 None:intergenic 50.0%
GTCCCACATCGCCTATAAGT+TGG + chr2.4:21715362-21715381 MS.gene63388:intron 50.0%
GTGAGGGAGTTTGAGTGTGA+GGG + chr2.4:21716029-21716048 MS.gene63388:intron 50.0%
GTGGATCGTATAACGTGACG+TGG - chr2.4:21717469-21717488 None:intergenic 50.0%
TCAAGTACCACAAGAGACGG+AGG - chr2.4:21715223-21715242 None:intergenic 50.0%
TCCAAGCCAACATCACTCGA+TGG + chr2.4:21718152-21718171 MS.gene63388:intron 50.0%
TGTGAGGGAGTTTGAGTGTG+AGG + chr2.4:21716028-21716047 MS.gene63388:intron 50.0%
TTGGGTCCATCGAGTGATGT+TGG - chr2.4:21718161-21718180 None:intergenic 50.0%
! AGAGTGAGAGTTGTGGGCTA+TGG - chr2.4:21717073-21717092 None:intergenic 50.0%
! TCCATCGAGTGATGTTGGCT+TGG - chr2.4:21718156-21718175 None:intergenic 50.0%
!! AGTGATGTTGGCTTGGACCA+TGG - chr2.4:21718149-21718168 None:intergenic 50.0%
!! CTTGGTGGAGTATTGGATCC+TGG + chr2.4:21715312-21715331 MS.gene63388:intron 50.0%
!! GAGGTGCTCTTTTCCCAAGT+TGG - chr2.4:21718685-21718704 None:intergenic 50.0%
AGCAATGGCAATGGGGATGG+TGG - chr2.4:21719326-21719345 None:intergenic 55.0%
AGGCTACCCCTCCCATATGA+AGG + chr2.4:21716822-21716841 MS.gene63388:intron 55.0%
CGTAGCCCTTCATATGGGAG+GGG - chr2.4:21716831-21716850 None:intergenic 55.0%
GCAAGCAATGGCAATGGGGA+TGG - chr2.4:21719329-21719348 None:intergenic 55.0%
GCGTAGCCCTTCATATGGGA+GGG - chr2.4:21716832-21716851 None:intergenic 55.0%
GGCTACCCCTCCCATATGAA+GGG + chr2.4:21716823-21716842 MS.gene63388:intron 55.0%
TATGACGCCTCCGTCTCTTG+TGG + chr2.4:21715213-21715232 MS.gene63388:intron 55.0%
TCATATGGGAGGGGTAGCCT+TGG - chr2.4:21716822-21716841 None:intergenic 55.0%
TGAGTGAAGGGTTGTGGGCT+AGG - chr2.4:21716914-21716933 None:intergenic 55.0%
TGCTGGAGATCTTGTGCGTG+AGG + chr2.4:21714054-21714073 MS.gene63388:CDS 55.0%
! AGGGGCGTAGCCCTTCATAT+GGG - chr2.4:21716836-21716855 None:intergenic 55.0%
! GAGTGAAGGGTTGTGGGCTA+GGG - chr2.4:21716913-21716932 None:intergenic 55.0%
CATATGAAGGGCTACGCCCC+TGG + chr2.4:21716835-21716854 MS.gene63388:intron 60.0%
GGCACTGTCTGCAACGCATC+AGG - chr2.4:21717428-21717447 None:intergenic 60.0%
GGCGTAGCCCTTCATATGGG+AGG - chr2.4:21716833-21716852 None:intergenic 60.0%
! CAGGGGCGTAGCCCTTCATA+TGG - chr2.4:21716837-21716856 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 21713884 21719535 21713884 ID=MS.gene63388
chr2.4 mRNA 21713884 21719535 21713884 ID=MS.gene63388.t1;Parent=MS.gene63388
chr2.4 exon 21713884 21714269 21713884 ID=MS.gene63388.t1.exon1;Parent=MS.gene63388.t1
chr2.4 CDS 21713884 21714269 21713884 ID=cds.MS.gene63388.t1;Parent=MS.gene63388.t1
chr2.4 exon 21718672 21718776 21718672 ID=MS.gene63388.t1.exon2;Parent=MS.gene63388.t1
chr2.4 CDS 21718672 21718776 21718672 ID=cds.MS.gene63388.t1;Parent=MS.gene63388.t1
chr2.4 exon 21719094 21719535 21719094 ID=MS.gene63388.t1.exon3;Parent=MS.gene63388.t1
chr2.4 CDS 21719094 21719535 21719094 ID=cds.MS.gene63388.t1;Parent=MS.gene63388.t1
Gene Sequence

>MS.gene63388

ATGGAGAATCTGCTTTGGCTTCCAACAAATGGCAAGAAGGCAATGGAAGATGAGCTTATAAGAGGACGTGACATGGCAAATCAATTACTTGAAGCACTAACTTATGATGATAAGTCAAATATAGAAGTGAAAGGGTCAAACTCAAAATCATCAAAAGTGTTACCCTTAATTGCTGGAGATCTTGTGCGTGAGGTACTTAAATCATTGACAAATACACTTTTACTCTTGAACAATGGCAAAGATTCCAATGATGTGGATGTTCCTATAAGTGTTAAAGATTTTTCTTTCTCAACAAATTGCAACAAGCTTGAGGAGGATTTTGATGGATCTTGCAAGAAACTCAAGACTCTCAACACCAAAAATCCAAAAGGGTCGAACAAGAGAAAGTAAGATTTATAATCCATGTTTTATACGAAGTTTCTTTGAGTATTTGACTTGTTTCAAATGTTTTCTACTATATTAATTCTCATATATCCAGTTAAAAAAAAAGAGTTATGTCATATATAATTTTCTTTTGTTATCAGTTTTTATATTTACACCTATCATCCAGTTAAGATTTTAGAGGGAAAAAAAAAATCAAATTTTCTTATTTTATTTAATTGTTTATTGGAAAACATAAAAATGATAGGTGAAGGGAAAAGAAGATCTGCTCATCCTAATTTTTTTTTTTTTCTGGTGATGCCAAACTTCTTTTTTTGGTGGTGCGTTCATCCTAAAATTAAATTAGTGTTTTTTTTTAAGGGAAAAATTAAATTACTGTTATTCTCTTCTTCTTCAAATCCAGAAATTTAACAAGAAGTTTTAATTTTGTGTTTTTGTTTGCCTTTCATAAGTAAACTCCCTTCTGTGTTCTATTTCCATTTTTACAAACCCTTTTTTTATTAAAAGTATATAATTTGTATTAAACAAACTCATTCTATCGAAATCGAATTGTAAGGTGATAATTGTCCCTACTTATAAACACCTCTATTATGTCTATGGCCGAACATCTGAAACATGATCTGAGTCGGTTGATAACGGAAATCAAATAGCATTTGATCTAATAGATTATATGGATAAACTCTCCTACTATATTTGACTTTAGATTGGACATGACCCTACCTTATAAAACTTGCTTGTAATGTTATAATTGTCGCTACTTATAAACAAATGTTCAAACCTTATTTCATCAAATGTGGGATTCTTAACACACCCTCTCACACTCAAGTACAGACATCTGGAGCGTGACATGTGTTGCCTTTCAAGTATAAGTGGTTAAGTCCCACATTCCTGATGAATGAATAAAATGTTGGATATAAGAGAGGTGGACCATATACTTTTGGGTGGAGATATGACGCCTCCGTCTCTTGTGGTACTTGAGCATTGGTCTGTTGTTTCTTTCGACATTCTTTTGAACTCCCTTACAAGGGTATTGGAACTATGATTCGACTTGGTGGAGTATTGGATCCTGGTATTGGGTTTCAAGTGTGATTGGTTAAGTCCCACATCGCCTATAAGTTGGTGAAATGTCATATATATATATATATATATATATATATATGGGGTTTGCTAGAACACACCCACTAGTTTTTATGTGCGAGTGTTTTAGCAAAGCTACACCTTAGGGTGTAATTAACCACTTTTTAGTTATTTACTTGCTAAAACACTCCCACATAAAAACTAGTGGGTGTGTTCTAGCAAATGCCTATAGGATTTGCTAGAACACACCCACTTGTTTTTGTTAGAAGGTGTGTTATAGCAACATACACCTTAGGGTGTATTTAACCACTTTTTAGTTATTTACTTGCTAAAACACTCCCACATATTGCTAAAACACTCCCACATAAAAACTAGTGGGTGTGTTATAGCAACATACACCTTAGGGTGTATTTAACCACTTTTTAGTTATTTACTTGCTAAAACACTCCCACATAAAAACTAGTGGATGTGTTCTAGCAAACCCCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAGAAGGCTTAACGGAGATTTACCAAACCAGTTTTGGGTAGAATTTAGATTAGGTATAACTCAACGGTGGATGGATCCCCTCTAATTAATAGACCTTATTTTTAATCTCTGAATGACTTTAATAGAGCTGAGTGTGAGGGAGTTTGAGTGTGAGGGAGTGTACTGAGAAAATTCCAAATCACAAATAGATTAAAGATAAGGTTTGATTTATAAAGAGTTGATATCTTTCATGCCTTACAACTCAGTCATGTAAGGTTGAGTTAAGCTCAGCGACGAAGCTCGCAAAAAATTTATGCAGGGGCCAACTATAAAGAAGATTTTTTTTTATAAAAAAAAAAAACATATTAAATTTAAGGATAAATTATATTTTTAGTCCCACAAATTATAATTTTTTAGGTTTAGTTCTTAAAAAAATTATCCAATTTTTGTCTCAGTTTTTTAAAATTTTACAAAAAAAAAAGTGGTTTTAGTCTTGAATTTAATCTCTAACAAAAAATTAAGGACTAAAATTAACAAATCTTAGGAACTTAACATTAAAATCGCTATTTAGAAACGTTGGGCAAAATACGTTTCAAGAACCCAATTTCATCAATAATTGTCTGTTTAATAATAGATTAATAATGTCTTTTCAAATGTAAATAAATATGTTATTTGCAAGAAACTCATTGTCCATTTAATTTGTTTATGATTATTGTCTTGATAATTTTTATTGTTGAAAAAGGTTTCTCTATTGTTGTTATTGATACCGAAAGTATCAAACCAATACAAATAAATATATCAATCTTGTAGTAATTTTTTTACTTTATTATTTATGCTAATTTTTGCAACTAAATTTATTTGGGATAGCTCAATGTTTATTATTTAGGGTAGCTGGATATAAATACATACCGACCACTTCATGAATAATATTTTTTTTGGGGTAGCCAAGGCTACCCCTCCCATATGAAGGGCTACGCCCCTGGTTAAGCTCATCCAAAACTCCAATACTTTCACCACCAATTAAAGCTCTTATCACCCTAGCCCACAACCCTTCACTCATACGAAAAAATGAGTTTAATTTACTAGGAGTGATATCTTTCACTCTACAAGTCACTTATGTAAGTTGTTTCAAAAAAAAAAAAAGTTAAGCTCGTCCAAACTACAATACTTTCACCACCAATTAACGCTCTTATCACCATAGCCCACAACTCTCACTCTTTGATTTACATCTTTCCTTTCAAACACTTTTCCACCTATGATATTATATATGTTTGCTCTTTCGTGTTCTTTTTACTTAGAGTAATGATATTTTGACATCCATTTGATGACAACTTTGTTGACAACCTTGTTTTTCTCACTTCTTATTGGTCAAAAACAATGGAGAGAGAAAAAGGTAGAGAGAGGATAACAACATCATGTGAGTATGAGAGAGAAAGTTGTCTAAAAGTTGTCAAAAAGTGGTTGTCAAAATATTATTTCTCTTTTACTTAAATCTTCGGCAAAACAATTTTCACTCTTCAGTGTTAGTTACAATCGCAACTCAATTTCGGCCTGATGCGTTGCAGACAGTGCCGCAATCCCAATATAGCAGCCACGTCACGTTATACGATCCACAATACAGTGGGTTTATTGAATTGTTTATTTATTACTTCATCCGTTTCACAATACTTGTCGCTTTTGAGGAAATTACACAAACTAAAAAATCAAATAAATTTTGTTATTTTTGATGAAATTCTTTGTTTTTTCTATAATACTCTTACTCATTTATTATTTCATTATATTATTTCTCTTTTTACAATAAAGAGATAATGATATTATTGATAAACAATAACTAATGTTGCATTGAAACTTGAAAGTGACAATTAAAGTGAAACAAAATTATTTTTCAAAAACGACATGTATTGTGAAACGGAGGGAGTACATAGTATTCCGTTCATCATGGCTCTAGCTAATTTTTTTTTTTTGAACAACTGTAACATGTAGTTATAAACCCTAATTATTGTTATGACAATGAGAAAGAACCCTAATTTAATTTTAGGAAAGAACAAGTTTTTATTTTATGGAGAATGCTAATGAACGTCTTTTGGGCAATGATTAAAGTACTAAAAAAATTAGATAGGATGGAGTTTTTTTTTTAAACTCAGTATAATTTGACCGTCCACTTAAGGACCTCAAAGTCAAAGTTACATATAGCATTAGCACAACTTTGAATGGATTTAATCCACCAAAATTGACATCAAAAGAAATCGAATACTTTGAAGAGAGGGCATTCCATGGTCCAAGCCAACATCACTCGATGGACCCAAATAATTTATTTTTGCCTTTTTTCTTTTTATGAAATAAAAACTTGAGTTTGGATAATTCATGTGAGATAGGGTACACAAACCATTATTTTATACTTGTATTTTAATCATCGCTCTAATTAATTCTCCAATCTTTTCATTCTTTTATACTTTTATTGCCCCCTCCCCCTAACAAAACAAAAGTATACTTGTCAGTACCCTTTCGTTAGGGAATATGTCTGTATCCTTTTATTTTGGAGATGTGCTGTACACTTAAAGGACGAATTTAAGAATAAAAAATAACATATGATGCCTCGAGTAGAATTTGATCCTTTTAATCTGCAGCACAGCTAGACATCCAGACATACATAATTATCAATTTATGGGATGATTAATGTTTTATAGTTTATTTATATTTTTCTGGTACATGTTTATAACTATTTTTGTCAATTGATTAAGGTATTATATTTAGTCATTAAAATATTGAATAAACCTTTTTTGTCTTCATACTTAAGGTCAATTTCACCAACTTGGGAAAAGAGCACCTCAATATTGATGGATGACGGTCATACTTGGAGAAAGTATGGACAAAAAAAGATCGCAAATACGAAATATTACAGGTATATATTCATCAGTTTGCATCTACACATTCACATGAGAAAAAAGATTAGTTAACATTATGTACCAATTCATGTAATTTTAATATAGTTTATAAATGTGTGAAATTCTATCATTCTATAACATTTGAATTAAAAGTTCTTATAAAAGAAATTAAATTCCTTGTGATAATTTTATACATATACAGAAAATTACACATAGAAGACAAGCATGCAACAAACTGCGCTGCTAAGTCTTTTTAAATGGCAAAATTCATCGACAATTAAATAACTTTTCTGTATACTTCAAAACTATTAATTAATTGGTAATATGTATGCAGGAGCTACTATAGGTGTACACACATGAACGATCAACATTGTGAAGCAATCAAACATGTTCAAAGAACTCAAGAGAACCCCCCATTGTACCGGACTACATATTATGGCCATCACACTTGTAAAAGCTATTTGCATTCAGATATAAATTTGGAATCCATTTTGTCATCAGATGACTCTTCTATATTACTTAGCTTCGATAGTAATATTCCAATTAAAGAAGAAAACTCGTTTCCACCATCCCCATTGCCATTGCTTGCATCTATAAAAGAGGATCCCAAGGAAGAGATCCATGATGATTATTGTTTTCAAAATCAATTGGTCTCATCAGATAACCTTATATCATGTAACTTTGAAGTTTATTTTGATTATTTGAGACATGCCACTATGCTATCATCGATTGAATCATTTGAATTTGAGAATGTTTATGACCAGTTAGGATTTTGA
Protein sequence

>MS.gene63388.t1

MENLLWLPTNGKKAMEDELIRGRDMANQLLEALTYDDKSNIEVKGSNSKSSKVLPLIAGDLVREVLKSLTNTLLLLNNGKDSNDVDVPISVKDFSFSTNCNKLEEDFDGSCKKLKTLNTKNPKGSNKRKSISPTWEKSTSILMDDGHTWRKYGQKKIANTKYYRSYYRCTHMNDQHCEAIKHVQRTQENPPLYRTTYYGHHTCKSYLHSDINLESILSSDDSSILLSFDSNIPIKEENSFPPSPLPLLASIKEDPKEEIHDDYCFQNQLVSSDNLISCNFEVYFDYLRHATMLSSIESFEFENVYDQLGF