Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63632.t1 | XP_024632961.1 | 92.3 | 794 | 47 | 3 | 1 | 780 | 1 | 794 | 0.00E+00 | 1429.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63632.t1 | Q9SZL8 | 27.2 | 632 | 392 | 15 | 50 | 679 | 72 | 637 | 4.0e-65 | 251.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63632.t1 | D3YBB9 | 81.5 | 745 | 120 | 3 | 44 | 778 | 76 | 812 | 0.0e+00 | 1229.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene63632.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63632.t1 | MTR_0558s0020 | 88.746 | 311 | 20 | 1 | 1 | 311 | 1 | 296 | 0.0 | 576 |
MS.gene63632.t1 | MTR_1g083640 | 93.357 | 286 | 19 | 0 | 1 | 286 | 1 | 286 | 0.0 | 564 |
MS.gene63632.t1 | MTR_8g446020 | 77.170 | 311 | 16 | 2 | 1 | 311 | 1 | 256 | 2.00e-163 | 473 |
MS.gene63632.t1 | MTR_2g014100 | 87.747 | 253 | 22 | 2 | 1 | 252 | 1 | 245 | 9.71e-156 | 453 |
MS.gene63632.t1 | MTR_6g090505 | 88.608 | 237 | 27 | 0 | 81 | 317 | 1 | 237 | 5.07e-149 | 440 |
MS.gene63632.t1 | MTR_6g090505 | 64.815 | 108 | 11 | 2 | 406 | 511 | 224 | 306 | 1.82e-33 | 132 |
MS.gene63632.t1 | MTR_6g090505 | 86.047 | 43 | 6 | 0 | 587 | 629 | 320 | 362 | 3.46e-16 | 81.6 |
MS.gene63632.t1 | MTR_0337s0040 | 73.188 | 276 | 20 | 2 | 1 | 276 | 1 | 222 | 2.02e-131 | 390 |
MS.gene63632.t1 | MTR_3g008240 | 84.404 | 218 | 19 | 1 | 1 | 218 | 1 | 203 | 1.02e-126 | 377 |
MS.gene63632.t1 | MTR_4g040430 | 83.945 | 218 | 15 | 2 | 1 | 218 | 1 | 198 | 2.58e-124 | 370 |
MS.gene63632.t1 | MTR_0337s0060 | 60.510 | 314 | 26 | 4 | 463 | 773 | 21 | 239 | 1.14e-112 | 342 |
MS.gene63632.t1 | MTR_5g071590 | 86.339 | 183 | 22 | 1 | 1 | 183 | 1 | 180 | 1.71e-110 | 334 |
MS.gene63632.t1 | MTR_1g055240 | 94.366 | 142 | 8 | 0 | 107 | 248 | 3 | 144 | 3.05e-92 | 285 |
MS.gene63632.t1 | MTR_0019s0290 | 88.889 | 153 | 14 | 1 | 100 | 249 | 8 | 160 | 1.70e-91 | 284 |
MS.gene63632.t1 | MTR_3g028680 | 78.947 | 152 | 29 | 1 | 632 | 780 | 1 | 152 | 1.38e-77 | 248 |
MS.gene63632.t1 | MTR_2g067090 | 79.866 | 149 | 27 | 1 | 635 | 780 | 99 | 247 | 1.17e-74 | 244 |
MS.gene63632.t1 | MTR_4g133495 | 65.193 | 181 | 34 | 3 | 590 | 764 | 88 | 245 | 6.60e-68 | 226 |
MS.gene63632.t1 | MTR_4g133340 | 65.193 | 181 | 34 | 3 | 590 | 764 | 88 | 245 | 6.60e-68 | 226 |
MS.gene63632.t1 | MTR_1281s0010 | 94.495 | 109 | 6 | 0 | 35 | 143 | 1 | 109 | 4.55e-67 | 217 |
MS.gene63632.t1 | MTR_6g051425 | 30.539 | 334 | 196 | 7 | 56 | 368 | 22 | 340 | 5.37e-40 | 151 |
MS.gene63632.t1 | MTR_8g046060 | 78.125 | 96 | 12 | 2 | 1 | 95 | 91 | 178 | 1.43e-36 | 137 |
MS.gene63632.t1 | MTR_4g008820 | 77.895 | 95 | 6 | 1 | 1 | 95 | 125 | 204 | 1.54e-35 | 144 |
MS.gene63632.t1 | MTR_2g067130 | 87.500 | 72 | 9 | 0 | 709 | 780 | 46 | 117 | 1.58e-34 | 129 |
MS.gene63632.t1 | MTR_1g070355 | 24.756 | 307 | 210 | 5 | 3 | 307 | 24 | 311 | 2.56e-20 | 95.9 |
MS.gene63632.t1 | MTR_0337s0050 | 80.556 | 36 | 7 | 0 | 275 | 310 | 14 | 49 | 4.21e-14 | 68.6 |
MS.gene63632.t1 | MTR_0402s0040 | 26.486 | 185 | 117 | 4 | 65 | 249 | 40 | 205 | 6.03e-14 | 75.5 |
MS.gene63632.t1 | MTR_1g013060 | 30.093 | 216 | 132 | 8 | 56 | 269 | 29 | 227 | 6.87e-14 | 72.4 |
MS.gene63632.t1 | MTR_4g035820 | 23.019 | 265 | 179 | 5 | 56 | 315 | 80 | 324 | 2.57e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63632.t1 | AT4G38180 | 27.201 | 636 | 387 | 15 | 50 | 679 | 72 | 637 | 2.04e-70 | 247 |
MS.gene63632.t1 | AT4G15090 | 25.910 | 714 | 443 | 17 | 66 | 771 | 66 | 701 | 1.93e-61 | 222 |
MS.gene63632.t1 | AT4G15090 | 25.910 | 714 | 443 | 17 | 66 | 771 | 66 | 701 | 1.93e-61 | 222 |
MS.gene63632.t1 | AT4G15090 | 25.910 | 714 | 443 | 17 | 66 | 771 | 66 | 701 | 1.93e-61 | 222 |
MS.gene63632.t1 | AT4G15090 | 25.910 | 714 | 443 | 17 | 66 | 771 | 66 | 701 | 1.93e-61 | 222 |
MS.gene63632.t1 | AT4G15090 | 25.910 | 714 | 443 | 17 | 66 | 771 | 66 | 701 | 1.93e-61 | 222 |
MS.gene63632.t1 | AT3G06250 | 25.234 | 642 | 359 | 17 | 39 | 675 | 178 | 703 | 3.03e-53 | 198 |
MS.gene63632.t1 | AT3G06250 | 25.234 | 642 | 359 | 17 | 39 | 675 | 178 | 703 | 3.03e-53 | 198 |
MS.gene63632.t1 | AT3G06250 | 25.234 | 642 | 359 | 17 | 39 | 675 | 178 | 703 | 3.03e-53 | 198 |
MS.gene63632.t1 | AT3G22170 | 23.865 | 683 | 422 | 16 | 48 | 722 | 67 | 659 | 7.13e-52 | 194 |
MS.gene63632.t1 | AT3G22170 | 23.865 | 683 | 422 | 16 | 48 | 722 | 67 | 659 | 7.13e-52 | 194 |
MS.gene63632.t1 | AT1G76320 | 24.859 | 708 | 433 | 20 | 55 | 756 | 1 | 615 | 1.42e-51 | 191 |
MS.gene63632.t1 | AT1G76320 | 24.363 | 706 | 439 | 18 | 55 | 756 | 1 | 615 | 4.08e-51 | 191 |
MS.gene63632.t1 | AT1G76320 | 24.504 | 706 | 438 | 19 | 55 | 756 | 1 | 615 | 4.34e-51 | 191 |
MS.gene63632.t1 | AT1G76320 | 24.504 | 706 | 438 | 19 | 55 | 756 | 1 | 615 | 4.34e-51 | 191 |
MS.gene63632.t1 | AT2G27110 | 25.455 | 550 | 352 | 13 | 229 | 775 | 36 | 530 | 3.15e-50 | 188 |
MS.gene63632.t1 | AT2G27110 | 25.505 | 545 | 348 | 13 | 229 | 770 | 181 | 670 | 5.41e-50 | 189 |
MS.gene63632.t1 | AT2G27110 | 25.505 | 545 | 348 | 13 | 229 | 770 | 181 | 670 | 5.41e-50 | 189 |
MS.gene63632.t1 | AT5G18960 | 23.830 | 705 | 411 | 20 | 37 | 733 | 197 | 783 | 6.39e-48 | 182 |
MS.gene63632.t1 | AT5G18960 | 23.830 | 705 | 411 | 20 | 37 | 733 | 197 | 783 | 6.39e-48 | 182 |
MS.gene63632.t1 | AT1G10240 | 24.960 | 621 | 376 | 20 | 65 | 673 | 62 | 604 | 7.11e-45 | 172 |
MS.gene63632.t1 | AT1G10240 | 24.960 | 621 | 376 | 20 | 65 | 673 | 62 | 604 | 7.11e-45 | 172 |
MS.gene63632.t1 | AT4G38170 | 24.145 | 497 | 298 | 14 | 251 | 733 | 24 | 455 | 6.52e-44 | 167 |
MS.gene63632.t1 | AT1G80010 | 24.961 | 637 | 385 | 22 | 57 | 676 | 101 | 661 | 2.76e-42 | 165 |
MS.gene63632.t1 | AT2G32250 | 23.849 | 717 | 414 | 21 | 24 | 732 | 13 | 605 | 1.21e-41 | 163 |
MS.gene63632.t1 | AT5G28530 | 24.647 | 637 | 385 | 18 | 56 | 674 | 60 | 619 | 1.57e-41 | 162 |
MS.gene63632.t1 | AT2G32250 | 23.849 | 717 | 414 | 21 | 24 | 732 | 13 | 605 | 1.62e-41 | 163 |
MS.gene63632.t1 | AT2G32250 | 23.849 | 717 | 414 | 21 | 24 | 732 | 13 | 605 | 1.62e-41 | 163 |
MS.gene63632.t1 | AT2G32250 | 23.849 | 717 | 414 | 21 | 24 | 732 | 13 | 605 | 1.79e-41 | 163 |
MS.gene63632.t1 | AT2G32250 | 23.849 | 717 | 414 | 21 | 24 | 732 | 13 | 605 | 1.79e-41 | 163 |
MS.gene63632.t1 | AT2G32250 | 23.849 | 717 | 414 | 21 | 24 | 732 | 13 | 605 | 1.79e-41 | 163 |
MS.gene63632.t1 | AT2G32250 | 23.977 | 684 | 390 | 20 | 57 | 732 | 3 | 564 | 4.60e-41 | 161 |
MS.gene63632.t1 | AT2G32250 | 23.977 | 684 | 390 | 20 | 57 | 732 | 3 | 564 | 4.78e-41 | 161 |
MS.gene63632.t1 | AT5G28530 | 24.490 | 637 | 382 | 19 | 56 | 674 | 60 | 615 | 8.65e-41 | 160 |
MS.gene63632.t1 | AT5G28530 | 24.490 | 637 | 382 | 19 | 56 | 674 | 60 | 615 | 8.65e-41 | 160 |
MS.gene63632.t1 | AT1G52520 | 23.237 | 624 | 399 | 17 | 57 | 676 | 91 | 638 | 5.41e-37 | 149 |
MS.gene63632.t1 | AT4G19990 | 24.664 | 446 | 287 | 10 | 57 | 499 | 27 | 426 | 5.01e-32 | 134 |
MS.gene63632.t1 | AT4G19990 | 35.294 | 102 | 56 | 3 | 607 | 708 | 497 | 588 | 4.09e-11 | 67.0 |
MS.gene63632.t1 | AT4G19990 | 24.664 | 446 | 287 | 10 | 57 | 499 | 27 | 426 | 5.01e-32 | 134 |
MS.gene63632.t1 | AT4G19990 | 35.294 | 102 | 56 | 3 | 607 | 708 | 497 | 588 | 4.09e-11 | 67.0 |
MS.gene63632.t1 | AT4G19990 | 24.664 | 446 | 287 | 10 | 57 | 499 | 27 | 426 | 5.22e-32 | 134 |
MS.gene63632.t1 | AT4G19990 | 35.294 | 102 | 56 | 3 | 607 | 708 | 497 | 588 | 4.05e-11 | 67.0 |
MS.gene63632.t1 | AT4G19990 | 24.439 | 446 | 288 | 9 | 57 | 499 | 41 | 440 | 6.66e-32 | 133 |
MS.gene63632.t1 | AT4G19990 | 35.052 | 97 | 53 | 2 | 607 | 703 | 511 | 597 | 4.66e-11 | 67.0 |
MS.gene63632.t1 | AT4G19990 | 24.664 | 446 | 287 | 10 | 57 | 499 | 27 | 426 | 7.07e-32 | 133 |
MS.gene63632.t1 | AT4G19990 | 33.333 | 102 | 58 | 2 | 607 | 708 | 497 | 588 | 4.49e-11 | 67.0 |
MS.gene63632.t1 | AT4G19990 | 24.664 | 446 | 287 | 10 | 57 | 499 | 27 | 426 | 7.07e-32 | 133 |
MS.gene63632.t1 | AT4G19990 | 33.333 | 102 | 58 | 2 | 607 | 708 | 497 | 588 | 4.49e-11 | 67.0 |
MS.gene63632.t1 | AT4G19990 | 29.104 | 268 | 183 | 4 | 235 | 499 | 106 | 369 | 5.67e-30 | 127 |
MS.gene63632.t1 | AT4G19990 | 37.113 | 97 | 51 | 3 | 607 | 703 | 440 | 526 | 3.77e-11 | 67.0 |
MS.gene63632.t1 | AT5G28530 | 22.488 | 627 | 348 | 21 | 56 | 674 | 60 | 556 | 7.90e-23 | 104 |
MS.gene63632.t1 | AT5G28530 | 22.329 | 627 | 345 | 22 | 56 | 674 | 60 | 552 | 5.01e-22 | 101 |
Find 111 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 3.2:+23534921 | MS.gene63632:CDS |
AGTCGCTTCTTTGACTTAAT+TGG | 0.149305 | 3.2:-23535741 | None:intergenic |
TAAATTTCAGCTGCCTTTAT+TGG | 0.156227 | 3.2:+23534331 | MS.gene63632:intron |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 3.2:+23534879 | MS.gene63632:CDS |
AATCGTCTGTGGTTTCTTAT+TGG | 0.195298 | 3.2:-23534458 | None:intergenic |
TTCTTTGACTTAATTGGATT+TGG | 0.266522 | 3.2:-23535735 | None:intergenic |
TCTGTTGTTGGCCTGTTGTT+AGG | 0.292589 | 3.2:-23533270 | None:intergenic |
CGATCATGATCTTCAAAACT+TGG | 0.305304 | 3.2:-23535219 | None:intergenic |
TTACTTCTCGAAATGATCTA+AGG | 0.311482 | 3.2:-23533461 | None:intergenic |
GCCTTCGAATGTTGATGTTT+TGG | 0.322848 | 3.2:+23535170 | MS.gene63632:CDS |
CAACTAGATTATTCTCTATT+CGG | 0.323831 | 3.2:+23533777 | MS.gene63632:CDS |
TTGAAGATCTTGGAGTTCTT+AGG | 0.331625 | 3.2:+23535339 | MS.gene63632:CDS |
GCATACGATTTGCGTAAGTT+TGG | 0.338878 | 3.2:-23534735 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 3.2:-23533827 | None:intergenic |
ATGATTGTCAAAACCAATAA+AGG | 0.357876 | 3.2:-23534344 | None:intergenic |
CTCGACGGTGTTCTTGAAGC+TGG | 0.383392 | 3.2:+23535579 | MS.gene63632:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 3.2:+23533834 | MS.gene63632:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 3.2:+23533826 | MS.gene63632:CDS |
GAGAACGTCTTATGAAGTTA+TGG | 0.394356 | 3.2:+23533536 | MS.gene63632:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 3.2:-23535717 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 3.2:+23535053 | MS.gene63632:CDS |
GAGGAGTTTCTTCTTTCTAA+AGG | 0.401366 | 3.2:+23535612 | MS.gene63632:CDS |
GAAGGCCTACCTCAGACTTT+AGG | 0.402909 | 3.2:+23534704 | MS.gene63632:CDS |
CATGTCGTATGTTTGAGAAC+AGG | 0.415108 | 3.2:+23535295 | MS.gene63632:CDS |
GTCTTATGAAGTTATGGGTC+AGG | 0.415385 | 3.2:+23533542 | MS.gene63632:CDS |
GAAGTTATGGGTCAGGGAGT+TGG | 0.426260 | 3.2:+23533549 | MS.gene63632:CDS |
CGTTATGTTTGTAACAAAGA+AGG | 0.427485 | 3.2:+23533222 | MS.gene63632:CDS |
AAAACACCTGGAAAACTATT+CGG | 0.428349 | 3.2:-23534517 | None:intergenic |
GCTGTTGGTGAAACATCTGC+TGG | 0.428855 | 3.2:+23535678 | MS.gene63632:CDS |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 3.2:+23533474 | MS.gene63632:CDS |
TTGATATCGTTGTGCTTGAC+TGG | 0.433430 | 3.2:-23535487 | None:intergenic |
TCCATGATTCTTTATTGCTA+GGG | 0.444266 | 3.2:-23533059 | None:intergenic |
TTCCATGATTCTTTATTGCT+AGG | 0.445442 | 3.2:-23533060 | None:intergenic |
TTCTTTGAACTTTGGTGCGG+TGG | 0.447203 | 3.2:-23535709 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 3.2:+23533339 | MS.gene63632:CDS |
TATGCATTGGTCTTCAGCTT+GGG | 0.450920 | 3.2:+23534753 | MS.gene63632:CDS |
ATGTGTATAAGATATATAGA+TGG | 0.452819 | 3.2:+23533391 | MS.gene63632:CDS |
ACATCAACTTCATCTGATAG+TGG | 0.459514 | 3.2:+23532934 | MS.gene63632:CDS |
CTTGCTTTGCATTTATTCAC+AGG | 0.460007 | 3.2:+23535019 | MS.gene63632:CDS |
GCTCTTATAAATTCTAAAGC+TGG | 0.462891 | 3.2:+23533504 | MS.gene63632:CDS |
GACCGCATCAGCTGACTGTT+GGG | 0.463150 | 3.2:-23534973 | None:intergenic |
ACCTGTGGACTGTCTGTTGT+TGG | 0.465317 | 3.2:-23533282 | None:intergenic |
AGAACGTCTTATGAAGTTAT+GGG | 0.466325 | 3.2:+23533537 | MS.gene63632:CDS |
GTTTACTTAATCCTAACAAC+AGG | 0.470860 | 3.2:+23533259 | MS.gene63632:CDS |
GGTAATTATGCATATAACAT+TGG | 0.471419 | 3.2:+23533126 | MS.gene63632:CDS |
CGCTTTAAAACATATTGTCC+AGG | 0.471916 | 3.2:-23535396 | None:intergenic |
CTTTCTAAAGGTATTCGTAC+AGG | 0.473399 | 3.2:+23535624 | MS.gene63632:CDS |
ATCATGATCGATTTGATGAA+AGG | 0.476999 | 3.2:+23535232 | MS.gene63632:CDS |
GTATGCATTGGTCTTCAGCT+TGG | 0.479582 | 3.2:+23534752 | MS.gene63632:CDS |
TTTAAGTCTGAAAACCGAAA+AGG | 0.483010 | 3.2:-23533588 | None:intergenic |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 3.2:-23535055 | None:intergenic |
GATCATGATCTTCAAAACTT+GGG | 0.487945 | 3.2:-23535218 | None:intergenic |
CATTCTTTGAAGACAATACC+TGG | 0.489494 | 3.2:+23535378 | MS.gene63632:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 3.2:+23535069 | MS.gene63632:CDS |
GTCTTCAGTGCCAACATTGA+CGG | 0.491796 | 3.2:-23535463 | None:intergenic |
TTGAAGACTTAGATGGCGTC+GGG | 0.493598 | 3.2:-23535647 | None:intergenic |
CTGTTGGTGAAACATCTGCT+GGG | 0.493682 | 3.2:+23535679 | MS.gene63632:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 3.2:+23534893 | MS.gene63632:CDS |
CCCCTAGCAATAAAGAATCA+TGG | 0.497001 | 3.2:+23533058 | MS.gene63632:CDS |
TGAATAAATGCAAAGCAAGA+AGG | 0.503349 | 3.2:-23535015 | None:intergenic |
TCTTTGAACTTTGGTGCGGT+GGG | 0.503874 | 3.2:-23535708 | None:intergenic |
TTACAACCAACCCTTTCCTC+AGG | 0.505082 | 3.2:-23533333 | None:intergenic |
AGCTGGAATATATTTGAAGC+TGG | 0.507410 | 3.2:+23533356 | MS.gene63632:CDS |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 3.2:+23534912 | MS.gene63632:CDS |
ACAAAACAAGAAATCTGATA+AGG | 0.511435 | 3.2:+23533188 | MS.gene63632:CDS |
CTAAGGTAACACGAATGCTC+TGG | 0.517941 | 3.2:-23533444 | None:intergenic |
GAATAAATGCAAAGCAAGAA+GGG | 0.521406 | 3.2:-23535014 | None:intergenic |
GTCAGCATGAATCATTGCTA+GGG | 0.522802 | 3.2:-23533019 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 3.2:+23533233 | MS.gene63632:CDS |
TAAGATATATAGATGGGATG+TGG | 0.528498 | 3.2:+23533398 | MS.gene63632:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 3.2:-23535050 | None:intergenic |
GAATGCTCTGGTTTATGTAA+TGG | 0.534744 | 3.2:-23533432 | None:intergenic |
CCATGATTCTTTATTGCTAG+GGG | 0.537011 | 3.2:-23533058 | None:intergenic |
TGTCAGCATGAATCATTGCT+AGG | 0.540740 | 3.2:-23533020 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 3.2:+23535070 | MS.gene63632:CDS |
AATCGAACAAGTGAGTGGTC+TGG | 0.543268 | 3.2:-23534856 | None:intergenic |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 3.2:+23533234 | MS.gene63632:CDS |
GTTATGGGTCAGGGAGTTGG+AGG | 0.547221 | 3.2:+23533552 | MS.gene63632:CDS |
AACACAATAACGCACTAGCC+TGG | 0.552106 | 3.2:-23534489 | None:intergenic |
AAGATCTTGGAGTTCTTAGG+TGG | 0.553166 | 3.2:+23535342 | MS.gene63632:CDS |
ATGTCGTATGTTTGAGAACA+GGG | 0.560861 | 3.2:+23535296 | MS.gene63632:CDS |
GGCCTACCTCAGACTTTAGG+TGG | 0.565384 | 3.2:+23534707 | MS.gene63632:CDS |
TCTTCAAAAGTAGCTGCTGT+TGG | 0.568528 | 3.2:+23535663 | MS.gene63632:CDS |
GGACCGCATCAGCTGACTGT+TGG | 0.570066 | 3.2:-23534974 | None:intergenic |
TTTGAAGACTTAGATGGCGT+CGG | 0.575863 | 3.2:-23535648 | None:intergenic |
ATCATGATCTTCAAAACTTG+GGG | 0.577988 | 3.2:-23535217 | None:intergenic |
ATGAAATCGACCGTCAATGT+TGG | 0.583819 | 3.2:+23535453 | MS.gene63632:CDS |
ATCCCAACAGTCAGCTGATG+CGG | 0.597403 | 3.2:+23534971 | MS.gene63632:CDS |
CTTACGCAAATCGTATGCAT+TGG | 0.597846 | 3.2:+23534740 | MS.gene63632:CDS |
TATGATGATGCTGATAATGA+CGG | 0.599988 | 3.2:+23535147 | MS.gene63632:CDS |
TGTGTATAAGATATATAGAT+GGG | 0.601002 | 3.2:+23533392 | MS.gene63632:CDS |
TCACTGATTCATGCTGAGAG+TGG | 0.606950 | 3.2:+23532979 | MS.gene63632:CDS |
TCCAAAACATCAACATTCGA+AGG | 0.607058 | 3.2:-23535171 | None:intergenic |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 3.2:+23535056 | MS.gene63632:CDS |
TCTTATGAAGTTATGGGTCA+GGG | 0.609153 | 3.2:+23533543 | MS.gene63632:CDS |
GCCAACAACAGACAGTCCAC+AGG | 0.619933 | 3.2:+23533281 | MS.gene63632:CDS |
ATGATGATGCTGATAATGAC+GGG | 0.620534 | 3.2:+23535148 | MS.gene63632:CDS |
TTCACAAACTCAATAACCTG+TGG | 0.626760 | 3.2:-23533297 | None:intergenic |
TGTTGGTGAAACATCTGCTG+GGG | 0.639082 | 3.2:+23535680 | MS.gene63632:CDS |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 3.2:+23534894 | MS.gene63632:CDS |
TGGTCTGTATAAATCGTCTG+TGG | 0.650424 | 3.2:-23534469 | None:intergenic |
GATTTCATCTTATCGACAGA+CGG | 0.652942 | 3.2:-23535438 | None:intergenic |
GACAAGCCACCTAAAGTCTG+AGG | 0.653221 | 3.2:-23534713 | None:intergenic |
TGTCGTATGTTTGAGAACAG+GGG | 0.653807 | 3.2:+23535297 | MS.gene63632:CDS |
TAAAGAATCGAACAAGTGAG+TGG | 0.654901 | 3.2:-23534861 | None:intergenic |
TCTTTCTTTGAACTTTGGTG+CGG | 0.659854 | 3.2:-23535712 | None:intergenic |
AATAAATGCAAAGCAAGAAG+GGG | 0.664515 | 3.2:-23535013 | None:intergenic |
TCAGCATGAATCATTGCTAG+GGG | 0.681156 | 3.2:-23533018 | None:intergenic |
AGCCACCTAAAGTCTGAGGT+AGG | 0.684957 | 3.2:-23534709 | None:intergenic |
AGGGGTGTACTTGTTTACAA+CGG | 0.695086 | 3.2:-23534995 | None:intergenic |
ACAGACGATTTATACAGACC+AGG | 0.720235 | 3.2:+23534471 | MS.gene63632:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTGATTGTTTTTATAAGTT+TGG | + | chr3.2:23535866-23535885 | MS.gene63632:intron | 15.0% |
!!! | TTTTATAAGTTTGGTTTTTT+AGG | + | chr3.2:23535875-23535894 | MS.gene63632:intron | 15.0% |
!!! | TTTTGATGAGTTAAATAATT+TGG | + | chr3.2:23534612-23534631 | MS.gene63632:CDS | 15.0% |
!! | ACATACTTATTAGAATACTT+AGG | + | chr3.2:23534125-23534144 | MS.gene63632:intron | 20.0% |
!! | ACTTATAAAAACAATCAATC+AGG | - | chr3.2:23535865-23535884 | None:intergenic | 20.0% |
!! | ATGTGTATAAGATATATAGA+TGG | + | chr3.2:23533391-23533410 | MS.gene63632:CDS | 20.0% |
!! | CTTATAAAAACAATCAATCA+GGG | - | chr3.2:23535864-23535883 | None:intergenic | 20.0% |
!! | TGAATATCATAGTAAAAAGA+TGG | - | chr3.2:23533705-23533724 | None:intergenic | 20.0% |
!! | TGTGTATAAGATATATAGAT+GGG | + | chr3.2:23533392-23533411 | MS.gene63632:CDS | 20.0% |
!!! | AAAGAGATTGAAGATTTTTA+TGG | + | chr3.2:23533105-23533124 | MS.gene63632:CDS | 20.0% |
!!! | AATCAGATTTTGACTATAAT+TGG | + | chr3.2:23534653-23534672 | MS.gene63632:CDS | 20.0% |
!!! | ATAACATTGGATTTTCTATT+AGG | + | chr3.2:23533139-23533158 | MS.gene63632:CDS | 20.0% |
!!! | ATCAGATTTTGACTATAATT+GGG | + | chr3.2:23534654-23534673 | MS.gene63632:CDS | 20.0% |
!!! | ATGATGATAAATTGTTTTGA+TGG | + | chr3.2:23534682-23534701 | MS.gene63632:CDS | 20.0% |
!!! | TTAATTTCATTAAGTTGTTC+TGG | + | chr3.2:23533895-23533914 | MS.gene63632:intron | 20.0% |
!!! | TTCTTATAATTTGTGATTAC+AGG | + | chr3.2:23534188-23534207 | MS.gene63632:intron | 20.0% |
! | ACAAAACAAGAAATCTGATA+AGG | + | chr3.2:23533188-23533207 | MS.gene63632:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr3.2:23533826-23533845 | MS.gene63632:CDS | 25.0% |
! | AGTAAAAAACACTAACCTAA+TGG | - | chr3.2:23533852-23533871 | None:intergenic | 25.0% |
! | ATGATTGTCAAAACCAATAA+AGG | - | chr3.2:23534347-23534366 | None:intergenic | 25.0% |
! | ATTATGAAAAAGCTAGAGAA+AGG | + | chr3.2:23535772-23535791 | MS.gene63632:intron | 25.0% |
! | CAAACTTAAATGATGTTGAT+TGG | + | chr3.2:23534049-23534068 | MS.gene63632:intron | 25.0% |
! | CAACTAGATTATTCTCTATT+CGG | + | chr3.2:23533777-23533796 | MS.gene63632:CDS | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr3.2:23535053-23535072 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr3.2:23534879-23534898 | MS.gene63632:CDS | 25.0% |
! | GGTAATTATGCATATAACAT+TGG | + | chr3.2:23533126-23533145 | MS.gene63632:CDS | 25.0% |
! | TCTTACTTATTTGAACTACA+CGG | + | chr3.2:23533971-23533990 | MS.gene63632:intron | 25.0% |
! | TTAGGTTATAAGTTTGTACT+AGG | + | chr3.2:23535893-23535912 | MS.gene63632:intron | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr3.2:23535053-23535072 | MS.gene63632:CDS | 25.0% |
!! | AACTTTGAAAAACTTCTCAA+AGG | - | chr3.2:23535100-23535119 | None:intergenic | 25.0% |
!! | AGAAAAATTTTAGATGACTC+TGG | - | chr3.2:23535561-23535580 | None:intergenic | 25.0% |
!! | CAAAGTTTTCACAATTGATA+AGG | + | chr3.2:23535113-23535132 | MS.gene63632:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATA+TGG | + | chr3.2:23534302-23534321 | MS.gene63632:intron | 25.0% |
!! | TTAACCATGTTGTTTGTTTA+GGG | + | chr3.2:23533996-23534015 | MS.gene63632:intron | 25.0% |
!! | TTCTTTGACTTAATTGGATT+TGG | - | chr3.2:23535738-23535757 | None:intergenic | 25.0% |
!! | TTTAACCATGTTGTTTGTTT+AGG | + | chr3.2:23533995-23534014 | MS.gene63632:intron | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | + | chr3.2:23533739-23533758 | MS.gene63632:CDS | 25.0% |
!!! | AAGTTTGTACTAGGTTTTTT+AGG | + | chr3.2:23535902-23535921 | MS.gene63632:intron | 25.0% |
!!! | ATTTATATTTTGAACTGCCT+AGG | + | chr3.2:23534073-23534092 | MS.gene63632:intron | 25.0% |
!!! | TCATCTAAAATTTTTCTCGA+CGG | + | chr3.2:23535564-23535583 | MS.gene63632:CDS | 25.0% |
!!! | TGATAAATTGTTTTGATGGA+AGG | + | chr3.2:23534686-23534705 | MS.gene63632:CDS | 25.0% |
AAAACACCTGGAAAACTATT+CGG | - | chr3.2:23534520-23534539 | None:intergenic | 30.0% | |
AAATCCCTAAACAAACAACA+TGG | - | chr3.2:23534003-23534022 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr3.2:23533234-23533253 | MS.gene63632:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr3.2:23533834-23533853 | MS.gene63632:CDS | 30.0% | |
AATAAATGCAAAGCAAGAAG+GGG | - | chr3.2:23535016-23535035 | None:intergenic | 30.0% | |
AGAACGTCTTATGAAGTTAT+GGG | + | chr3.2:23533537-23533556 | MS.gene63632:CDS | 30.0% | |
ATCATGATCTTCAAAACTTG+GGG | - | chr3.2:23535220-23535239 | None:intergenic | 30.0% | |
CGTTATGTTTGTAACAAAGA+AGG | + | chr3.2:23533222-23533241 | MS.gene63632:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr3.2:23535058-23535077 | None:intergenic | 30.0% | |
CTTACTTATTTGAACTACAC+GGG | + | chr3.2:23533972-23533991 | MS.gene63632:intron | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr3.2:23535056-23535075 | MS.gene63632:CDS | 30.0% | |
GAATAAATGCAAAGCAAGAA+GGG | - | chr3.2:23535017-23535036 | None:intergenic | 30.0% | |
GAGAATGCAAAGAAAAATCT+TGG | + | chr3.2:23534568-23534587 | MS.gene63632:CDS | 30.0% | |
GATCATGATCTTCAAAACTT+GGG | - | chr3.2:23535221-23535240 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr3.2:23533830-23533849 | None:intergenic | 30.0% | |
GTTTACTTAATCCTAACAAC+AGG | + | chr3.2:23533259-23533278 | MS.gene63632:CDS | 30.0% | |
TAAATTTCAGCTGCCTTTAT+TGG | + | chr3.2:23534331-23534350 | MS.gene63632:intron | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr3.2:23533233-23533252 | MS.gene63632:CDS | 30.0% | |
TAAGATATATAGATGGGATG+TGG | + | chr3.2:23533398-23533417 | MS.gene63632:CDS | 30.0% | |
TAAGTTTGTCTCAAACCAAA+TGG | - | chr3.2:23534037-23534056 | None:intergenic | 30.0% | |
TCCATGATTCTTTATTGCTA+GGG | - | chr3.2:23533062-23533081 | None:intergenic | 30.0% | |
TGAATAAATGCAAAGCAAGA+AGG | - | chr3.2:23535018-23535037 | None:intergenic | 30.0% | |
TTACTTCTCGAAATGATCTA+AGG | - | chr3.2:23533464-23533483 | None:intergenic | 30.0% | |
TTCCATGATTCTTTATTGCT+AGG | - | chr3.2:23533063-23533082 | None:intergenic | 30.0% | |
TTTAAGTCTGAAAACCGAAA+AGG | - | chr3.2:23533591-23533610 | None:intergenic | 30.0% | |
! | TATGATGATGCTGATAATGA+CGG | + | chr3.2:23535147-23535166 | MS.gene63632:CDS | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr3.2:23535720-23535739 | None:intergenic | 30.0% |
! | TTTGTTTCTTCCGATTGATA+AGG | - | chr3.2:23535806-23535825 | None:intergenic | 30.0% |
!! | ATCATGATCGATTTGATGAA+AGG | + | chr3.2:23535232-23535251 | MS.gene63632:CDS | 30.0% |
!! | GCTCTTATAAATTCTAAAGC+TGG | + | chr3.2:23533504-23533523 | MS.gene63632:CDS | 30.0% |
!!! | GACAATATGTTTTAAAGCGT+TGG | + | chr3.2:23535400-23535419 | MS.gene63632:CDS | 30.0% |
AATCGTCTGTGGTTTCTTAT+TGG | - | chr3.2:23534461-23534480 | None:intergenic | 35.0% | |
AATTCGTCAAAAAGAGATGG+TGG | + | chr3.2:23533626-23533645 | MS.gene63632:CDS | 35.0% | |
ACATCAACTTCATCTGATAG+TGG | + | chr3.2:23532934-23532953 | MS.gene63632:CDS | 35.0% | |
ACATTATGGTTCAGAGAATG+AGG | + | chr3.2:23534893-23534912 | MS.gene63632:CDS | 35.0% | |
AGTAAAAAGATGGTTTCGAG+AGG | - | chr3.2:23533695-23533714 | None:intergenic | 35.0% | |
ATGTCGTATGTTTGAGAACA+GGG | + | chr3.2:23535296-23535315 | MS.gene63632:CDS | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr3.2:23534894-23534913 | MS.gene63632:CDS | 35.0% | |
CCATGATTCTTTATTGCTAG+GGG | - | chr3.2:23533061-23533080 | None:intergenic | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr3.2:23533474-23533493 | MS.gene63632:CDS | 35.0% | |
CGATCATGATCTTCAAAACT+TGG | - | chr3.2:23535222-23535241 | None:intergenic | 35.0% | |
CTTGCTTTGCATTTATTCAC+AGG | + | chr3.2:23535019-23535038 | MS.gene63632:CDS | 35.0% | |
GAAAGAAAAACCTGAGGAAA+GGG | + | chr3.2:23533323-23533342 | MS.gene63632:CDS | 35.0% | |
GAAAGTGAAAGAAAAACCTG+AGG | + | chr3.2:23533317-23533336 | MS.gene63632:CDS | 35.0% | |
GACAATTCGTCAAAAAGAGA+TGG | + | chr3.2:23533623-23533642 | MS.gene63632:CDS | 35.0% | |
GAGAACGTCTTATGAAGTTA+TGG | + | chr3.2:23533536-23533555 | MS.gene63632:CDS | 35.0% | |
GAGGAGTTTCTTCTTTCTAA+AGG | + | chr3.2:23535612-23535631 | MS.gene63632:CDS | 35.0% | |
GATTTCATCTTATCGACAGA+CGG | - | chr3.2:23535441-23535460 | None:intergenic | 35.0% | |
GGCAGAAATTCCTTATCAAT+CGG | + | chr3.2:23535793-23535812 | MS.gene63632:intron | 35.0% | |
GTAAAAAGATGGTTTCGAGA+GGG | - | chr3.2:23533694-23533713 | None:intergenic | 35.0% | |
TAAAGAATCGAACAAGTGAG+TGG | - | chr3.2:23534864-23534883 | None:intergenic | 35.0% | |
TAAGACCTATAGTCAATCCT+AGG | - | chr3.2:23533956-23533975 | None:intergenic | 35.0% | |
TCCAAAACATCAACATTCGA+AGG | - | chr3.2:23535174-23535193 | None:intergenic | 35.0% | |
TCTTATGAAGTTATGGGTCA+GGG | + | chr3.2:23533543-23533562 | MS.gene63632:CDS | 35.0% | |
TCTTTCTTTGAACTTTGGTG+CGG | - | chr3.2:23535715-23535734 | None:intergenic | 35.0% | |
TGAAAGAAAAACCTGAGGAA+AGG | + | chr3.2:23533322-23533341 | MS.gene63632:CDS | 35.0% | |
TGTTCTTGAAGCTGGAAAAA+AGG | + | chr3.2:23535587-23535606 | MS.gene63632:CDS | 35.0% | |
TTCACAAACTCAATAACCTG+TGG | - | chr3.2:23533300-23533319 | None:intergenic | 35.0% | |
TTGAAGATCTTGGAGTTCTT+AGG | + | chr3.2:23535339-23535358 | MS.gene63632:CDS | 35.0% | |
! | AGCTGGAATATATTTGAAGC+TGG | + | chr3.2:23533356-23533375 | MS.gene63632:CDS | 35.0% |
! | AGTCGCTTCTTTGACTTAAT+TGG | - | chr3.2:23535744-23535763 | None:intergenic | 35.0% |
! | AGTTTTCCAGGTGTTTTTCA+TGG | + | chr3.2:23534523-23534542 | MS.gene63632:CDS | 35.0% |
! | ATGATGATGCTGATAATGAC+GGG | + | chr3.2:23535148-23535167 | MS.gene63632:CDS | 35.0% |
! | ATTTAGTTTACGCATTGCTG+AGG | + | chr3.2:23534159-23534178 | MS.gene63632:intron | 35.0% |
! | CATTCTTTGAAGACAATACC+TGG | + | chr3.2:23535378-23535397 | MS.gene63632:CDS | 35.0% |
! | GAAGCTTTATCAGTGATTGT+GGG | + | chr3.2:23535837-23535856 | MS.gene63632:intron | 35.0% |
! | GAATGCTCTGGTTTATGTAA+TGG | - | chr3.2:23533435-23533454 | None:intergenic | 35.0% |
! | GTTTTCCAGGTGTTTTTCAT+GGG | + | chr3.2:23534524-23534543 | MS.gene63632:CDS | 35.0% |
! | TCAATTCCGAATAGTTTTCC+AGG | + | chr3.2:23534511-23534530 | MS.gene63632:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr3.2:23534823-23534842 | MS.gene63632:CDS | 35.0% |
! | TGAAGCTTTATCAGTGATTG+TGG | + | chr3.2:23535836-23535855 | MS.gene63632:intron | 35.0% |
!! | CGCTTTAAAACATATTGTCC+AGG | - | chr3.2:23535399-23535418 | None:intergenic | 35.0% |
!! | CTTTCTAAAGGTATTCGTAC+AGG | + | chr3.2:23535624-23535643 | MS.gene63632:CDS | 35.0% |
!!! | CATCGAAAGAGTGTTTTGTT+TGG | + | chr3.2:23534364-23534383 | MS.gene63632:CDS | 35.0% |
!!! | GCTACTTTTGAAGACTTAGA+TGG | - | chr3.2:23535657-23535676 | None:intergenic | 35.0% |
!!! | GCTAGTATTTTTTGGTCAGA+TGG | + | chr3.2:23533747-23533766 | MS.gene63632:CDS | 35.0% |
!!! | TCGACATGTTTTGAAGATCT+TGG | + | chr3.2:23535329-23535348 | MS.gene63632:CDS | 35.0% |
!!! | TTTTTCATGGGCTTTGTTCA+TGG | + | chr3.2:23534536-23534555 | MS.gene63632:CDS | 35.0% |
AACTGCCTAGGATTGACTAT+AGG | + | chr3.2:23533948-23533967 | MS.gene63632:intron | 40.0% | |
AAGATCTTGGAGTTCTTAGG+TGG | + | chr3.2:23535342-23535361 | MS.gene63632:CDS | 40.0% | |
ACAGACGATTTATACAGACC+AGG | + | chr3.2:23534471-23534490 | MS.gene63632:CDS | 40.0% | |
ATGAAATCGACCGTCAATGT+TGG | + | chr3.2:23535453-23535472 | MS.gene63632:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr3.2:23535070-23535089 | MS.gene63632:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+AGG | + | chr3.2:23535295-23535314 | MS.gene63632:CDS | 40.0% | |
CCCCTAGCAATAAAGAATCA+TGG | + | chr3.2:23533058-23533077 | MS.gene63632:CDS | 40.0% | |
CTTACGCAAATCGTATGCAT+TGG | + | chr3.2:23534740-23534759 | MS.gene63632:CDS | 40.0% | |
GCATACGATTTGCGTAAGTT+TGG | - | chr3.2:23534738-23534757 | None:intergenic | 40.0% | |
GTCAGCATGAATCATTGCTA+GGG | - | chr3.2:23533022-23533041 | None:intergenic | 40.0% | |
GTCTTATGAAGTTATGGGTC+AGG | + | chr3.2:23533542-23533561 | MS.gene63632:CDS | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr3.2:23535069-23535088 | MS.gene63632:CDS | 40.0% | |
TCACACAAGACAAAATGCCT+AGG | - | chr3.2:23534093-23534112 | None:intergenic | 40.0% | |
TCAGCATGAATCATTGCTAG+GGG | - | chr3.2:23533021-23533040 | None:intergenic | 40.0% | |
TCTTCAAAAGTAGCTGCTGT+TGG | + | chr3.2:23535663-23535682 | MS.gene63632:CDS | 40.0% | |
TGGTCTGTATAAATCGTCTG+TGG | - | chr3.2:23534472-23534491 | None:intergenic | 40.0% | |
TGTCAGCATGAATCATTGCT+AGG | - | chr3.2:23533023-23533042 | None:intergenic | 40.0% | |
TGTCGTATGTTTGAGAACAG+GGG | + | chr3.2:23535297-23535316 | MS.gene63632:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAC+TGG | - | chr3.2:23535490-23535509 | None:intergenic | 40.0% | |
TTTGAAGACTTAGATGGCGT+CGG | - | chr3.2:23535651-23535670 | None:intergenic | 40.0% | |
! | AGGGGTGTACTTGTTTACAA+CGG | - | chr3.2:23534998-23535017 | None:intergenic | 40.0% |
! | ATTTTCTCGCTTCTGCCATT+TGG | + | chr3.2:23534019-23534038 | MS.gene63632:intron | 40.0% |
! | CAGTACATTTTGAACTGCCT+AGG | + | chr3.2:23533936-23533955 | MS.gene63632:intron | 40.0% |
! | GCACAGAGAATCTTCCTTTT+CGG | + | chr3.2:23533574-23533593 | MS.gene63632:CDS | 40.0% |
! | GCCTTCGAATGTTGATGTTT+TGG | + | chr3.2:23535170-23535189 | MS.gene63632:CDS | 40.0% |
! | GTCAAGTCACATTTTACAGC+TGG | + | chr3.2:23534775-23534794 | MS.gene63632:CDS | 40.0% |
! | TCATGCTGAGTTGGACTTTA+AGG | + | chr3.2:23534921-23534940 | MS.gene63632:CDS | 40.0% |
!! | TATGCATTGGTCTTCAGCTT+GGG | + | chr3.2:23534753-23534772 | MS.gene63632:CDS | 40.0% |
!!! | AGACAGCAGCTACTTTTGAT+TGG | + | chr3.2:23534407-23534426 | MS.gene63632:CDS | 40.0% |
AACACAATAACGCACTAGCC+TGG | - | chr3.2:23534492-23534511 | None:intergenic | 45.0% | |
AATCGAACAAGTGAGTGGTC+TGG | - | chr3.2:23534859-23534878 | None:intergenic | 45.0% | |
CAAAGCCCATGAAAAACACC+TGG | - | chr3.2:23534532-23534551 | None:intergenic | 45.0% | |
CTAAGGTAACACGAATGCTC+TGG | - | chr3.2:23533447-23533466 | None:intergenic | 45.0% | |
GAAAAACCTGAGGAAAGGGT+TGG | + | chr3.2:23533327-23533346 | MS.gene63632:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | + | chr3.2:23534912-23534931 | MS.gene63632:CDS | 45.0% | |
GTCTTCAGTGCCAACATTGA+CGG | - | chr3.2:23535466-23535485 | None:intergenic | 45.0% | |
TGAAGCTGGAAAAAAGGCAG+AGG | + | chr3.2:23535593-23535612 | MS.gene63632:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+AGG | - | chr3.2:23533336-23533355 | None:intergenic | 45.0% | |
TTGAAGACTTAGATGGCGTC+GGG | - | chr3.2:23535650-23535669 | None:intergenic | 45.0% | |
! | CGTCAAAAAGAGATGGTGGT+TGG | + | chr3.2:23533630-23533649 | MS.gene63632:CDS | 45.0% |
! | CTGTTGGTGAAACATCTGCT+GGG | + | chr3.2:23535679-23535698 | MS.gene63632:CDS | 45.0% |
! | TCTGTTGTTGGCCTGTTGTT+AGG | - | chr3.2:23533273-23533292 | None:intergenic | 45.0% |
! | TCTTTGAACTTTGGTGCGGT+GGG | - | chr3.2:23535711-23535730 | None:intergenic | 45.0% |
! | TGTTGGTGAAACATCTGCTG+GGG | + | chr3.2:23535680-23535699 | MS.gene63632:CDS | 45.0% |
! | TTCTTTGAACTTTGGTGCGG+TGG | - | chr3.2:23535712-23535731 | None:intergenic | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr3.2:23533339-23533358 | MS.gene63632:CDS | 45.0% |
!! | GTATGCATTGGTCTTCAGCT+TGG | + | chr3.2:23534752-23534771 | MS.gene63632:CDS | 45.0% |
!! | TCACTGATTCATGCTGAGAG+TGG | + | chr3.2:23532979-23532998 | MS.gene63632:CDS | 45.0% |
ATCCCAACAGTCAGCTGATG+CGG | + | chr3.2:23534971-23534990 | MS.gene63632:CDS | 50.0% | |
GAAGGCCTACCTCAGACTTT+AGG | + | chr3.2:23534704-23534723 | MS.gene63632:CDS | 50.0% | |
GAAGTTATGGGTCAGGGAGT+TGG | + | chr3.2:23533549-23533568 | MS.gene63632:CDS | 50.0% | |
GACAAGCCACCTAAAGTCTG+AGG | - | chr3.2:23534716-23534735 | None:intergenic | 50.0% | |
! | ACCTGTGGACTGTCTGTTGT+TGG | - | chr3.2:23533285-23533304 | None:intergenic | 50.0% |
! | AGCCACCTAAAGTCTGAGGT+AGG | - | chr3.2:23534712-23534731 | None:intergenic | 50.0% |
! | GCTGTTGGTGAAACATCTGC+TGG | + | chr3.2:23535678-23535697 | MS.gene63632:CDS | 50.0% |
CTCGACGGTGTTCTTGAAGC+TGG | + | chr3.2:23535579-23535598 | MS.gene63632:CDS | 55.0% | |
GACCGCATCAGCTGACTGTT+GGG | - | chr3.2:23534976-23534995 | None:intergenic | 55.0% | |
GCCAACAACAGACAGTCCAC+AGG | + | chr3.2:23533281-23533300 | MS.gene63632:CDS | 55.0% | |
GGCCTACCTCAGACTTTAGG+TGG | + | chr3.2:23534707-23534726 | MS.gene63632:CDS | 55.0% | |
GTTATGGGTCAGGGAGTTGG+AGG | + | chr3.2:23533552-23533571 | MS.gene63632:CDS | 55.0% | |
GGACCGCATCAGCTGACTGT+TGG | - | chr3.2:23534977-23534996 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 23532925 | 23535930 | 23532925 | ID=MS.gene63632 |
chr3.2 | mRNA | 23532925 | 23535930 | 23532925 | ID=MS.gene63632.t1;Parent=MS.gene63632 |
chr3.2 | exon | 23532925 | 23533855 | 23532925 | ID=MS.gene63632.t1.exon1;Parent=MS.gene63632.t1 |
chr3.2 | CDS | 23532925 | 23533855 | 23532925 | ID=cds.MS.gene63632.t1;Parent=MS.gene63632.t1 |
chr3.2 | exon | 23534341 | 23535748 | 23534341 | ID=MS.gene63632.t1.exon2;Parent=MS.gene63632.t1 |
chr3.2 | CDS | 23534341 | 23535748 | 23534341 | ID=cds.MS.gene63632.t1;Parent=MS.gene63632.t1 |
chr3.2 | exon | 23535924 | 23535930 | 23535924 | ID=MS.gene63632.t1.exon3;Parent=MS.gene63632.t1 |
chr3.2 | CDS | 23535924 | 23535930 | 23535924 | ID=cds.MS.gene63632.t1;Parent=MS.gene63632.t1 |
Gene Sequence |
Protein sequence |