Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63857.t1 | AES97927.2 | 58.1 | 415 | 90 | 8 | 1 | 363 | 1 | 383 | 8.70E-106 | 394 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63857.t1 | Q84WU6 | 28.3 | 516 | 248 | 20 | 9 | 430 | 16 | 503 | 5.7e-29 | 130.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63857.t1 | G7KA25 | 58.1 | 415 | 90 | 8 | 1 | 363 | 1 | 383 | 6.3e-106 | 394.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene63857.t1 | TF | B3-ARF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63857.t1 | MTR_5g060780 | 58.354 | 413 | 94 | 8 | 1 | 364 | 1 | 384 | 5.67e-141 | 409 |
MS.gene63857.t1 | MTR_5g061890 | 58.072 | 415 | 90 | 8 | 1 | 363 | 1 | 383 | 2.34e-140 | 407 |
MS.gene63857.t1 | MTR_5g460920 | 58.151 | 411 | 98 | 7 | 1 | 364 | 1 | 384 | 7.30e-139 | 403 |
MS.gene63857.t1 | MTR_5g060630 | 49.751 | 402 | 125 | 12 | 79 | 435 | 154 | 523 | 1.84e-94 | 294 |
MS.gene63857.t1 | MTR_5g460740 | 49.751 | 402 | 125 | 12 | 79 | 435 | 154 | 523 | 1.84e-94 | 294 |
MS.gene63857.t1 | MTR_5g061220 | 38.557 | 485 | 173 | 17 | 1 | 397 | 8 | 455 | 3.26e-75 | 244 |
MS.gene63857.t1 | MTR_1g058210 | 39.850 | 399 | 143 | 15 | 1 | 339 | 1 | 362 | 3.07e-65 | 216 |
MS.gene63857.t1 | MTR_2g024430 | 35.189 | 503 | 213 | 18 | 1 | 435 | 9 | 466 | 4.53e-64 | 214 |
MS.gene63857.t1 | MTR_5g060770 | 43.807 | 331 | 76 | 9 | 76 | 381 | 70 | 315 | 9.16e-57 | 191 |
MS.gene63857.t1 | MTR_5g040880 | 32.480 | 508 | 224 | 16 | 5 | 435 | 4 | 469 | 1.15e-56 | 195 |
MS.gene63857.t1 | MTR_2g006270 | 33.584 | 399 | 166 | 13 | 1 | 339 | 1 | 360 | 2.43e-48 | 171 |
MS.gene63857.t1 | MTR_5g040740 | 38.387 | 310 | 122 | 7 | 1 | 251 | 1 | 300 | 3.41e-48 | 170 |
MS.gene63857.t1 | MTR_2g006380 | 31.888 | 392 | 164 | 13 | 6 | 339 | 14 | 360 | 4.36e-46 | 165 |
MS.gene63857.t1 | MTR_5g082140 | 31.510 | 457 | 209 | 13 | 1 | 393 | 1 | 417 | 2.61e-43 | 158 |
MS.gene63857.t1 | MTR_3g073420 | 29.502 | 522 | 230 | 18 | 8 | 427 | 15 | 500 | 1.21e-38 | 147 |
MS.gene63857.t1 | MTR_5g062960 | 43.172 | 227 | 85 | 7 | 180 | 405 | 1 | 184 | 2.00e-38 | 138 |
MS.gene63857.t1 | MTR_5g460910 | 38.369 | 331 | 72 | 10 | 76 | 381 | 87 | 310 | 2.44e-38 | 142 |
MS.gene63857.t1 | MTR_2g094570 | 26.819 | 481 | 211 | 18 | 8 | 381 | 7 | 453 | 8.58e-30 | 122 |
MS.gene63857.t1 | MTR_2g094570 | 26.804 | 485 | 206 | 19 | 8 | 381 | 63 | 509 | 1.06e-29 | 122 |
MS.gene63857.t1 | MTR_2g094570 | 26.804 | 485 | 206 | 19 | 8 | 381 | 7 | 453 | 1.13e-29 | 122 |
MS.gene63857.t1 | MTR_4g058930 | 27.907 | 430 | 182 | 16 | 1 | 333 | 1 | 399 | 6.48e-29 | 120 |
MS.gene63857.t1 | MTR_4g058930 | 27.907 | 430 | 182 | 16 | 1 | 333 | 1 | 399 | 6.48e-29 | 120 |
MS.gene63857.t1 | MTR_1g094960 | 27.451 | 510 | 228 | 20 | 9 | 407 | 16 | 494 | 1.30e-28 | 119 |
MS.gene63857.t1 | MTR_5g062970 | 38.384 | 198 | 56 | 6 | 12 | 149 | 38 | 229 | 1.73e-24 | 101 |
MS.gene63857.t1 | MTR_1g064430 | 28.926 | 363 | 162 | 13 | 81 | 381 | 159 | 487 | 4.18e-23 | 102 |
MS.gene63857.t1 | MTR_1g064430 | 28.926 | 363 | 162 | 13 | 81 | 381 | 146 | 474 | 4.51e-23 | 102 |
MS.gene63857.t1 | MTR_7g101275 | 32.934 | 167 | 99 | 5 | 81 | 237 | 109 | 272 | 3.06e-20 | 92.4 |
MS.gene63857.t1 | MTR_7g101280 | 25.000 | 364 | 180 | 13 | 81 | 381 | 148 | 481 | 8.53e-20 | 92.4 |
MS.gene63857.t1 | MTR_0041s0110 | 25.000 | 364 | 180 | 13 | 81 | 381 | 148 | 481 | 8.53e-20 | 92.4 |
MS.gene63857.t1 | MTR_2g005240 | 24.171 | 422 | 228 | 14 | 12 | 375 | 23 | 410 | 3.50e-19 | 90.5 |
MS.gene63857.t1 | MTR_4g021580 | 24.611 | 386 | 198 | 14 | 10 | 333 | 17 | 371 | 3.22e-17 | 84.3 |
MS.gene63857.t1 | MTR_4g021580 | 24.156 | 385 | 201 | 13 | 10 | 333 | 17 | 371 | 4.01e-17 | 84.3 |
MS.gene63857.t1 | MTR_2g014770 | 22.772 | 404 | 221 | 12 | 3 | 344 | 44 | 418 | 1.09e-16 | 82.8 |
MS.gene63857.t1 | MTR_2g014770 | 22.772 | 404 | 221 | 12 | 3 | 344 | 44 | 418 | 1.17e-16 | 82.8 |
MS.gene63857.t1 | MTR_4g088210 | 23.256 | 301 | 164 | 8 | 8 | 242 | 34 | 333 | 2.85e-16 | 81.6 |
MS.gene63857.t1 | MTR_4g088210 | 23.256 | 301 | 164 | 8 | 8 | 242 | 34 | 333 | 3.11e-16 | 81.6 |
MS.gene63857.t1 | MTR_0041s0120 | 28.571 | 182 | 103 | 5 | 79 | 237 | 107 | 284 | 2.16e-15 | 78.2 |
MS.gene63857.t1 | MTR_7g062540 | 23.291 | 395 | 204 | 16 | 12 | 344 | 14 | 371 | 7.80e-15 | 77.0 |
MS.gene63857.t1 | MTR_8g100050 | 25.751 | 233 | 140 | 7 | 86 | 310 | 184 | 391 | 7.41e-14 | 74.3 |
MS.gene63857.t1 | MTR_8g100050 | 25.751 | 233 | 140 | 7 | 86 | 310 | 184 | 391 | 1.73e-13 | 73.2 |
MS.gene63857.t1 | MTR_3g064050 | 23.352 | 364 | 191 | 12 | 9 | 310 | 23 | 360 | 4.63e-12 | 68.6 |
MS.gene63857.t1 | MTR_8g079492 | 23.746 | 299 | 147 | 10 | 9 | 237 | 20 | 307 | 1.91e-11 | 66.6 |
MS.gene63857.t1 | MTR_8g079492 | 23.746 | 299 | 147 | 10 | 9 | 237 | 20 | 307 | 1.92e-11 | 66.6 |
MS.gene63857.t1 | MTR_4g060460 | 29.814 | 161 | 100 | 5 | 81 | 229 | 183 | 342 | 3.42e-11 | 65.9 |
MS.gene63857.t1 | MTR_4g060460 | 29.814 | 161 | 100 | 5 | 81 | 229 | 183 | 342 | 3.75e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene63857.t1 | AT1G77850 | 29.389 | 524 | 232 | 24 | 9 | 430 | 16 | 503 | 4.26e-39 | 149 |
MS.gene63857.t1 | AT1G77850 | 29.389 | 524 | 232 | 24 | 9 | 430 | 16 | 503 | 5.45e-39 | 148 |
MS.gene63857.t1 | AT4G30080 | 27.004 | 474 | 218 | 18 | 9 | 382 | 16 | 461 | 8.66e-30 | 122 |
MS.gene63857.t1 | AT2G28350 | 26.498 | 434 | 189 | 14 | 3 | 336 | 1 | 404 | 3.80e-24 | 105 |
MS.gene63857.t1 | AT2G28350 | 26.498 | 434 | 189 | 14 | 3 | 336 | 1 | 404 | 4.25e-24 | 105 |
MS.gene63857.t1 | AT2G46530 | 25.765 | 392 | 189 | 17 | 12 | 340 | 21 | 373 | 4.10e-18 | 87.0 |
MS.gene63857.t1 | AT2G46530 | 26.020 | 392 | 188 | 17 | 12 | 340 | 42 | 394 | 6.89e-18 | 86.7 |
MS.gene63857.t1 | AT3G61830 | 23.848 | 369 | 186 | 15 | 12 | 317 | 25 | 361 | 3.49e-16 | 81.3 |
MS.gene63857.t1 | AT1G59750 | 23.206 | 418 | 230 | 12 | 12 | 364 | 22 | 413 | 6.67e-16 | 80.5 |
MS.gene63857.t1 | AT2G46530 | 27.925 | 265 | 144 | 10 | 84 | 340 | 61 | 286 | 1.30e-15 | 79.3 |
MS.gene63857.t1 | AT1G59750 | 23.095 | 420 | 230 | 12 | 12 | 364 | 22 | 415 | 1.30e-15 | 79.7 |
MS.gene63857.t1 | AT1G59750 | 22.472 | 356 | 195 | 9 | 12 | 310 | 22 | 353 | 1.34e-15 | 79.7 |
MS.gene63857.t1 | AT1G59750 | 22.472 | 356 | 195 | 9 | 12 | 310 | 22 | 353 | 1.34e-15 | 79.7 |
MS.gene63857.t1 | AT3G61830 | 26.860 | 242 | 137 | 9 | 84 | 317 | 101 | 310 | 1.70e-14 | 75.9 |
MS.gene63857.t1 | AT2G33860 | 29.651 | 172 | 104 | 6 | 81 | 240 | 19 | 185 | 4.32e-14 | 74.3 |
MS.gene63857.t1 | AT2G33860 | 27.976 | 168 | 112 | 4 | 81 | 240 | 176 | 342 | 6.20e-14 | 74.3 |
MS.gene63857.t1 | AT5G37020 | 24.110 | 365 | 187 | 14 | 9 | 310 | 19 | 356 | 1.66e-13 | 73.2 |
MS.gene63857.t1 | AT5G37020 | 24.110 | 365 | 187 | 14 | 9 | 310 | 19 | 356 | 2.01e-13 | 72.8 |
MS.gene63857.t1 | AT1G30330 | 24.221 | 289 | 159 | 8 | 9 | 237 | 20 | 308 | 3.17e-13 | 72.4 |
MS.gene63857.t1 | AT1G30330 | 24.221 | 289 | 159 | 8 | 9 | 237 | 22 | 310 | 3.20e-13 | 72.4 |
MS.gene63857.t1 | AT1G30330 | 24.221 | 289 | 159 | 8 | 9 | 237 | 22 | 310 | 3.20e-13 | 72.4 |
MS.gene63857.t1 | AT1G34390 | 24.194 | 372 | 181 | 15 | 12 | 318 | 27 | 362 | 3.36e-13 | 72.0 |
MS.gene63857.t1 | AT4G23980 | 25.926 | 243 | 138 | 10 | 84 | 315 | 140 | 351 | 1.07e-12 | 70.5 |
MS.gene63857.t1 | AT4G23980 | 25.926 | 243 | 138 | 10 | 84 | 315 | 140 | 351 | 1.07e-12 | 70.5 |
MS.gene63857.t1 | AT5G62000 | 25.610 | 164 | 115 | 3 | 86 | 242 | 186 | 349 | 3.86e-12 | 68.9 |
MS.gene63857.t1 | AT5G62000 | 25.610 | 164 | 115 | 3 | 86 | 242 | 186 | 349 | 4.27e-12 | 68.9 |
MS.gene63857.t1 | AT5G62000 | 25.610 | 164 | 115 | 3 | 86 | 242 | 186 | 349 | 4.27e-12 | 68.9 |
MS.gene63857.t1 | AT5G62000 | 25.610 | 164 | 115 | 3 | 86 | 242 | 186 | 349 | 4.27e-12 | 68.9 |
MS.gene63857.t1 | AT5G62000 | 25.610 | 164 | 115 | 3 | 86 | 242 | 186 | 349 | 4.27e-12 | 68.9 |
MS.gene63857.t1 | AT1G34410 | 25.676 | 296 | 167 | 11 | 84 | 367 | 150 | 404 | 1.65e-11 | 66.6 |
MS.gene63857.t1 | AT1G35520 | 22.432 | 370 | 192 | 12 | 12 | 318 | 27 | 364 | 2.04e-11 | 66.2 |
MS.gene63857.t1 | AT5G37020 | 25.941 | 239 | 143 | 9 | 81 | 310 | 48 | 261 | 3.57e-11 | 65.9 |
Find 121 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGCATTTCTGCCATATTT+TGG | 0.157428 | 5.1:+75607312 | None:intergenic |
TCTCTTTATCATAGGTTAAC+TGG | 0.215844 | 5.1:-75605693 | MS.gene63857:intron |
GATTCTTCTAATGCCCTAAT+TGG | 0.216353 | 5.1:-75606444 | MS.gene63857:CDS |
TAAACTTTAGAGTGAATCTT+TGG | 0.262364 | 5.1:+75607271 | None:intergenic |
TGTAATTTAGGCAGTGTAAT+TGG | 0.285343 | 5.1:+75605502 | None:intergenic |
TTGGCTCATTGGACCTATTA+TGG | 0.290349 | 5.1:+75605272 | None:intergenic |
ACCTCAAGCATGCGCCAATT+AGG | 0.306156 | 5.1:+75606430 | None:intergenic |
TCACTTGGTGCTTGGCTCAT+TGG | 0.308376 | 5.1:+75605261 | None:intergenic |
GACGGTGGAGGCTGTAATTT+AGG | 0.311042 | 5.1:+75605490 | None:intergenic |
TTTGGATTCTGTGGGATATT+AGG | 0.311346 | 5.1:+75605664 | None:intergenic |
TGCCAAGTATTGACTAGGTT+TGG | 0.312049 | 5.1:+75605646 | None:intergenic |
ATGAAGATTGGTTGGAAATC+TGG | 0.337904 | 5.1:-75606561 | MS.gene63857:CDS |
CTTCTGTGGACCCCAAAATA+TGG | 0.347094 | 5.1:-75607324 | MS.gene63857:CDS |
CGTTGCCTCATAACCATAAT+AGG | 0.348120 | 5.1:-75605285 | MS.gene63857:CDS |
CCTCAAGCATGCGCCAATTA+GGG | 0.353910 | 5.1:+75606431 | None:intergenic |
ATGGTGATTGTGGCAGCGTT+AGG | 0.364809 | 5.1:+75607212 | None:intergenic |
ATCTTTGGAATCTTGACGTC+GGG | 0.375178 | 5.1:+75607286 | None:intergenic |
AATTCCGACAAATATCTTTC+CGG | 0.375286 | 5.1:+75606764 | None:intergenic |
TAGAGAATGTGGAATTTGTT+GGG | 0.378366 | 5.1:+75605528 | None:intergenic |
ATGAATCTGATACAGATAAA+TGG | 0.381071 | 5.1:+75605422 | None:intergenic |
AGATTTCCAACCAATCTTCA+TGG | 0.383662 | 5.1:+75606563 | None:intergenic |
GATAAGCATGACGGATTCAC+TGG | 0.385768 | 5.1:-75605385 | MS.gene63857:CDS |
TTAGAGAATGTGGAATTTGT+TGG | 0.397789 | 5.1:+75605527 | None:intergenic |
GGGGAAGTTGATGGTGGAGG+AGG | 0.400299 | 5.1:+75605588 | None:intergenic |
CTCTTTATCATAGGTTAACT+GGG | 0.403608 | 5.1:-75605692 | MS.gene63857:intron |
CGCTTCATTTGTAGTGAAGT+TGG | 0.408928 | 5.1:+75606731 | None:intergenic |
TTCCTCCTTCATTCCTATGC+AGG | 0.431062 | 5.1:-75605464 | MS.gene63857:CDS |
TGGTGATTGTGGCAGCGTTA+GGG | 0.433150 | 5.1:+75607213 | None:intergenic |
AAGCTTCCTTTGAAGAAAGA+TGG | 0.434888 | 5.1:-75606528 | MS.gene63857:CDS |
GACTCGTCCAAGTCAAGCTT+GGG | 0.438970 | 5.1:+75606939 | None:intergenic |
GTCAATACTTGGCAGATTGA+AGG | 0.440369 | 5.1:-75605637 | MS.gene63857:CDS |
TATAAGTGTACCTCCATTCT+CGG | 0.441745 | 5.1:+75606886 | None:intergenic |
TCATTCCTATGCAGGGAGTC+AGG | 0.445797 | 5.1:-75605456 | MS.gene63857:CDS |
TTGGACCTATTATGGTTATG+AGG | 0.446632 | 5.1:+75605280 | None:intergenic |
CAATCTGCCAAGTATTGACT+AGG | 0.467493 | 5.1:+75605641 | None:intergenic |
TGGAATCTTGACGTCGGGGC+CGG | 0.467970 | 5.1:+75607291 | None:intergenic |
AGACTCGTCCAAGTCAAGCT+TGG | 0.469561 | 5.1:+75606938 | None:intergenic |
AGATATTTGTCGGAATTAGC+AGG | 0.473421 | 5.1:-75606758 | MS.gene63857:CDS |
GTTGACGATGCCATGAAGAT+TGG | 0.477758 | 5.1:-75606573 | MS.gene63857:CDS |
AATGAAAACAACAGAATCGT+TGG | 0.478070 | 5.1:+75606797 | None:intergenic |
GATCTTGCCCAAGCTTGACT+TGG | 0.487325 | 5.1:-75606946 | MS.gene63857:CDS |
GAAGATCCATCTTTCTTCAA+AGG | 0.488166 | 5.1:+75606522 | None:intergenic |
TCTTCCTCAGCCACCTTCTG+TGG | 0.490509 | 5.1:-75607338 | MS.gene63857:CDS |
ATCCAAACCTAGTCAATACT+TGG | 0.494257 | 5.1:-75605648 | MS.gene63857:CDS |
CAGTTTGGCAAAGACCTCTT+CGG | 0.495832 | 5.1:+75607121 | None:intergenic |
TTATCATAGGTTAACTGGGA+TGG | 0.500782 | 5.1:-75605688 | MS.gene63857:intron |
AAAATATGGCAGAAATGCTC+CGG | 0.502054 | 5.1:-75607310 | MS.gene63857:CDS |
TTGACTAGGTTTGGATTCTG+TGG | 0.502251 | 5.1:+75605655 | None:intergenic |
TGACTAGGTTTGGATTCTGT+GGG | 0.503890 | 5.1:+75605656 | None:intergenic |
GGAATTATTAATGTTAGAGA+TGG | 0.504440 | 5.1:+75606165 | None:intergenic |
AAGATACCTCACTTGGTGCT+TGG | 0.507669 | 5.1:+75605253 | None:intergenic |
GATCACATATTCTCAGCCTA+AGG | 0.508876 | 5.1:-75606490 | MS.gene63857:CDS |
TTTACAACTTCCCACAAGGT+TGG | 0.509398 | 5.1:-75607252 | MS.gene63857:CDS |
GACTCCCTGCATAGGAATGA+AGG | 0.513722 | 5.1:+75605459 | None:intergenic |
ACTGGGAATAGTTCAATGGC+AGG | 0.519560 | 5.1:-75605367 | MS.gene63857:CDS |
CCCTAATTGGCGCATGCTTG+AGG | 0.523645 | 5.1:-75606431 | MS.gene63857:intron |
TCCTCCTTCATTCCTATGCA+GGG | 0.528220 | 5.1:-75605463 | MS.gene63857:CDS |
GGCAGAGACGATGCATGGAA+TGG | 0.529105 | 5.1:+75607169 | None:intergenic |
GAGACGATGCATGGAATGGA+TGG | 0.532282 | 5.1:+75607173 | None:intergenic |
AATGAAGCGGGTGAAGGAGG+AGG | 0.532506 | 5.1:-75606717 | MS.gene63857:CDS |
ATCTATCAAGTGCAAGAACA+AGG | 0.532510 | 5.1:+75606143 | None:intergenic |
ACAAAAGAGATTGTCCCCTT+AGG | 0.537213 | 5.1:+75606474 | None:intergenic |
GAGGAGGAAGTCGAAGGTGC+AGG | 0.538875 | 5.1:+75605604 | None:intergenic |
CCAAGGTTTAGCTCTATGTC+AGG | 0.539866 | 5.1:+75605328 | None:intergenic |
AAGGAGGAAGTTGACGGTGG+AGG | 0.544243 | 5.1:+75605478 | None:intergenic |
AGAGAATGTGGAATTTGTTG+GGG | 0.546295 | 5.1:+75605529 | None:intergenic |
AAACTCAGTAGATTACATAC+TGG | 0.547036 | 5.1:-75606855 | MS.gene63857:CDS |
CCGACCTTAAAAGCCGAGAA+TGG | 0.547731 | 5.1:-75606899 | MS.gene63857:CDS |
TCTGCCGGAAAGATATTTGT+CGG | 0.551480 | 5.1:-75606768 | MS.gene63857:CDS |
ATCACATATTCTCAGCCTAA+GGG | 0.553508 | 5.1:-75606489 | MS.gene63857:CDS |
ACGATGCCATGAAGATTGGT+TGG | 0.558168 | 5.1:-75606569 | MS.gene63857:CDS |
ACATGCATGTTCCAACCTTG+TGG | 0.558832 | 5.1:+75607241 | None:intergenic |
GTAATTGGCATTAGAGAATG+TGG | 0.559357 | 5.1:+75605517 | None:intergenic |
GTGTATTATCCGACAGCTAG+TGG | 0.562344 | 5.1:-75606627 | MS.gene63857:CDS |
GGGTCCACAGAAGGTGGCTG+AGG | 0.567295 | 5.1:+75607334 | None:intergenic |
ACTACAAATGAAGCGGGTGA+AGG | 0.571225 | 5.1:-75606723 | MS.gene63857:CDS |
GCAAAGACCTCTTCGGTGTG+AGG | 0.573732 | 5.1:+75607128 | None:intergenic |
AGTTCAATGGCAGGGTTGAG+TGG | 0.576646 | 5.1:-75605358 | MS.gene63857:CDS |
TCAGTAGATTACATACTGGC+TGG | 0.577585 | 5.1:-75606851 | MS.gene63857:CDS |
AACTTCACTACAAATGAAGC+GGG | 0.578549 | 5.1:-75606729 | MS.gene63857:CDS |
TCATGCCTGACTCCCTGCAT+AGG | 0.582427 | 5.1:+75605451 | None:intergenic |
CATGCATGTTCCAACCTTGT+GGG | 0.582560 | 5.1:+75607242 | None:intergenic |
GAAGAACTCTGAGAAAGTCT+AGG | 0.582661 | 5.1:+75605553 | None:intergenic |
ATTCACTGGGAATAGTTCAA+TGG | 0.583674 | 5.1:-75605371 | MS.gene63857:CDS |
TGGACGGTAACGATCAAGAA+TGG | 0.583957 | 5.1:+75607193 | None:intergenic |
CCTGACATAGAGCTAAACCT+TGG | 0.585110 | 5.1:-75605328 | MS.gene63857:CDS |
ATGAAGGAGGAAGTTGACGG+TGG | 0.590817 | 5.1:+75605475 | None:intergenic |
GGTGATTGTGGCAGCGTTAG+GGG | 0.592113 | 5.1:+75607214 | None:intergenic |
AGGGAATTTAACTGAGATTG+CGG | 0.593668 | 5.1:-75606697 | MS.gene63857:CDS |
ACAAATGAAGCGGGTGAAGG+AGG | 0.598536 | 5.1:-75606720 | MS.gene63857:CDS |
GAGAATGTGGAATTTGTTGG+GGG | 0.600149 | 5.1:+75605530 | None:intergenic |
TGTTGATCCTCACACCGAAG+AGG | 0.601436 | 5.1:-75607135 | MS.gene63857:intron |
TCAACGGCAGAGACGATGCA+TGG | 0.604313 | 5.1:+75607164 | None:intergenic |
GCCAATGAAGATACCTCACT+TGG | 0.608165 | 5.1:+75605246 | None:intergenic |
AAAGTTTACAACTTCCCACA+AGG | 0.610143 | 5.1:-75607256 | MS.gene63857:CDS |
ACGATCAAGAATGGTGATTG+TGG | 0.610673 | 5.1:+75607202 | None:intergenic |
ATGAAGCGGGTGAAGGAGGA+GGG | 0.612902 | 5.1:-75606716 | MS.gene63857:CDS |
ATTATCCGACAGCTAGTGGT+TGG | 0.618045 | 5.1:-75606623 | MS.gene63857:CDS |
CAACTTCACTACAAATGAAG+CGG | 0.618434 | 5.1:-75606730 | MS.gene63857:CDS |
CGATGCATGGAATGGATGGA+CGG | 0.620709 | 5.1:+75607177 | None:intergenic |
CTGGGAATAGTTCAATGGCA+GGG | 0.622015 | 5.1:-75605366 | MS.gene63857:CDS |
CTAAACCTTGGCAGTCCTAG+AGG | 0.624031 | 5.1:-75605316 | MS.gene63857:CDS |
GGAATGAAGGAGGAAGTTGA+CGG | 0.626658 | 5.1:+75605472 | None:intergenic |
TAATCTACTGAGTTTCGCGT+AGG | 0.626849 | 5.1:+75606863 | None:intergenic |
CAGCACCTCTAGGACTGCCA+AGG | 0.629336 | 5.1:+75605311 | None:intergenic |
AATCTTTGGAATCTTGACGT+CGG | 0.630358 | 5.1:+75607285 | None:intergenic |
ATAAGCATGACGGATTCACT+GGG | 0.631573 | 5.1:-75605384 | MS.gene63857:CDS |
GGCAACGAGTCAGCACCTCT+AGG | 0.637822 | 5.1:+75605301 | None:intergenic |
ACCTTAAAAGCCGAGAATGG+AGG | 0.638927 | 5.1:-75606896 | MS.gene63857:CDS |
TTTAGATGCAGCGGAACTGG+CGG | 0.650332 | 5.1:-75606673 | MS.gene63857:CDS |
TCACGCCAACCACTAGCTGT+CGG | 0.652491 | 5.1:+75606618 | None:intergenic |
AATGAGCCAAGCACCAAGTG+AGG | 0.655123 | 5.1:-75605259 | None:intergenic |
AGGATCAACAAAGAGATCAA+CGG | 0.658354 | 5.1:+75607148 | None:intergenic |
TCTATCAAGTGCAAGAACAA+GGG | 0.664029 | 5.1:+75606144 | None:intergenic |
TCTTTGGAATCTTGACGTCG+GGG | 0.665271 | 5.1:+75607287 | None:intergenic |
AGAATGTGGAATTTGTTGGG+GGG | 0.665661 | 5.1:+75605531 | None:intergenic |
AGGTGGCTGAGGAAGAGACA+TGG | 0.686110 | 5.1:+75607345 | None:intergenic |
TCCCTGCATAGGAATGAAGG+AGG | 0.687917 | 5.1:+75605462 | None:intergenic |
TCACATATTCTCAGCCTAAG+GGG | 0.688382 | 5.1:-75606488 | MS.gene63857:CDS |
ATCAAGTCAGAGCATTCACA+AGG | 0.688407 | 5.1:+75606966 | None:intergenic |
ATGGTGGAGGAGGAAGTCGA+AGG | 0.704506 | 5.1:+75605598 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCAATCAAATAATCTTATTA+TGG | + | chr5.1:75606280-75606299 | None:intergenic | 15.0% |
!!! | ATTTTTTATCTCTTTATCAT+AGG | - | chr5.1:75606903-75606922 | MS.gene63857:CDS | 15.0% |
!!! | CTTAATTTTCAAATTACATT+TGG | + | chr5.1:75606395-75606414 | None:intergenic | 15.0% |
!!! | TCATTGTAAATACTTGATTT+TGG | - | chr5.1:75606645-75606664 | MS.gene63857:CDS | 20.0% |
! | ATGAATCTGATACAGATAAA+TGG | + | chr5.1:75607185-75607204 | None:intergenic | 25.0% |
! | CTAAAATTATGAGACTTAGT+AGG | - | chr5.1:75606342-75606361 | MS.gene63857:intron | 25.0% |
! | GGAATTATTAATGTTAGAGA+TGG | + | chr5.1:75606442-75606461 | None:intergenic | 25.0% |
! | TCTTATTATGGATTCAACTT+TGG | + | chr5.1:75606268-75606287 | None:intergenic | 25.0% |
!!! | TAAACTTTAGAGTGAATCTT+TGG | + | chr5.1:75605336-75605355 | None:intergenic | 25.0% |
AAACTCAGTAGATTACATAC+TGG | - | chr5.1:75605749-75605768 | MS.gene63857:intron | 30.0% | |
AATGAAAACAACAGAATCGT+TGG | + | chr5.1:75605810-75605829 | None:intergenic | 30.0% | |
AATTCCGACAAATATCTTTC+CGG | + | chr5.1:75605843-75605862 | None:intergenic | 30.0% | |
AGGGAGTTACATATAAAAAC+AGG | + | chr5.1:75606555-75606574 | None:intergenic | 30.0% | |
CTCTTTATCATAGGTTAACT+GGG | - | chr5.1:75606912-75606931 | MS.gene63857:CDS | 30.0% | |
GGTACTTATGCTATCTTATT+TGG | - | chr5.1:75606194-75606213 | MS.gene63857:intron | 30.0% | |
TACAATGAGAAATGCTTAGA+AGG | + | chr5.1:75606633-75606652 | None:intergenic | 30.0% | |
TCTCTTTATCATAGGTTAAC+TGG | - | chr5.1:75606911-75606930 | MS.gene63857:CDS | 30.0% | |
TGTAATTTAGGCAGTGTAAT+TGG | + | chr5.1:75607105-75607124 | None:intergenic | 30.0% | |
TTAGAGAATGTGGAATTTGT+TGG | + | chr5.1:75607080-75607099 | None:intergenic | 30.0% | |
! | ACATTTGGAACTTATCCTAT+AGG | + | chr5.1:75606380-75606399 | None:intergenic | 30.0% |
! | CATTTGGAACTTATCCTATA+GGG | + | chr5.1:75606379-75606398 | None:intergenic | 30.0% |
! | GTTTTCATTAAAAACTCTGC+CGG | - | chr5.1:75605821-75605840 | MS.gene63857:intron | 30.0% |
! | TAGAGAATGTGGAATTTGTT+GGG | + | chr5.1:75607079-75607098 | None:intergenic | 30.0% |
!! | AAAGTCTAGGACTTTTTGTT+GGG | + | chr5.1:75607041-75607060 | None:intergenic | 30.0% |
!! | GTTTTGAATGATAAGCATGA+CGG | - | chr5.1:75607210-75607229 | MS.gene63857:CDS | 30.0% |
AAAATATGGCAGAAATGCTC+CGG | - | chr5.1:75605294-75605313 | MS.gene63857:CDS | 35.0% | |
AAAGTTTACAACTTCCCACA+AGG | - | chr5.1:75605348-75605367 | MS.gene63857:CDS | 35.0% | |
AACTTCACTACAAATGAAGC+GGG | - | chr5.1:75605875-75605894 | MS.gene63857:intron | 35.0% | |
AGATATTTGTCGGAATTAGC+AGG | - | chr5.1:75605846-75605865 | MS.gene63857:intron | 35.0% | |
AGATTTCCAACCAATCTTCA+TGG | + | chr5.1:75606044-75606063 | None:intergenic | 35.0% | |
AGGATCAACAAAGAGATCAA+CGG | + | chr5.1:75605459-75605478 | None:intergenic | 35.0% | |
AGGGAATTTAACTGAGATTG+CGG | - | chr5.1:75605907-75605926 | MS.gene63857:intron | 35.0% | |
ATCACATATTCTCAGCCTAA+GGG | - | chr5.1:75606115-75606134 | MS.gene63857:intron | 35.0% | |
ATCCAAACCTAGTCAATACT+TGG | - | chr5.1:75606956-75606975 | MS.gene63857:CDS | 35.0% | |
ATCTATCAAGTGCAAGAACA+AGG | + | chr5.1:75606464-75606483 | None:intergenic | 35.0% | |
ATTCACTGGGAATAGTTCAA+TGG | - | chr5.1:75607233-75607252 | MS.gene63857:CDS | 35.0% | |
CAACTTCACTACAAATGAAG+CGG | - | chr5.1:75605874-75605893 | MS.gene63857:intron | 35.0% | |
CTAAATTAGCCCACCTAAAT+TGG | - | chr5.1:75606688-75606707 | MS.gene63857:CDS | 35.0% | |
GAAGATCCATCTTTCTTCAA+AGG | + | chr5.1:75606085-75606104 | None:intergenic | 35.0% | |
GATTCTTCTAATGCCCTAAT+TGG | - | chr5.1:75606160-75606179 | MS.gene63857:CDS | 35.0% | |
GTAATTGGCATTAGAGAATG+TGG | + | chr5.1:75607090-75607109 | None:intergenic | 35.0% | |
TATAAGTGTACCTCCATTCT+CGG | + | chr5.1:75605721-75605740 | None:intergenic | 35.0% | |
TCTATCAAGTGCAAGAACAA+GGG | + | chr5.1:75606463-75606482 | None:intergenic | 35.0% | |
TTATCATAGGTTAACTGGGA+TGG | - | chr5.1:75606916-75606935 | MS.gene63857:CDS | 35.0% | |
TTGGACCTATTATGGTTATG+AGG | + | chr5.1:75607327-75607346 | None:intergenic | 35.0% | |
TTTGGATTCTGTGGGATATT+AGG | + | chr5.1:75606943-75606962 | None:intergenic | 35.0% | |
! | AAGCTTCCTTTGAAGAAAGA+TGG | - | chr5.1:75606076-75606095 | MS.gene63857:intron | 35.0% |
! | AGCATTTCTGCCATATTTTG+GGG | + | chr5.1:75605293-75605312 | None:intergenic | 35.0% |
! | ATGAAGATTGGTTGGAAATC+TGG | - | chr5.1:75606043-75606062 | MS.gene63857:intron | 35.0% |
! | GAGCATTTCTGCCATATTTT+GGG | + | chr5.1:75605294-75605313 | None:intergenic | 35.0% |
!! | AAGTCTAGGACTTTTTGTTG+GGG | + | chr5.1:75607040-75607059 | None:intergenic | 35.0% |
!! | AATCTTTGGAATCTTGACGT+CGG | + | chr5.1:75605322-75605341 | None:intergenic | 35.0% |
!! | AGAGAATGTGGAATTTGTTG+GGG | + | chr5.1:75607078-75607097 | None:intergenic | 35.0% |
!! | GAAAGTCTAGGACTTTTTGT+TGG | + | chr5.1:75607042-75607061 | None:intergenic | 35.0% |
ACAAAAGAGATTGTCCCCTT+AGG | + | chr5.1:75606133-75606152 | None:intergenic | 40.0% | |
ACGATCAAGAATGGTGATTG+TGG | + | chr5.1:75605405-75605424 | None:intergenic | 40.0% | |
ACTATTGCAGCAAGTCAAGT+AGG | + | chr5.1:75606575-75606594 | None:intergenic | 40.0% | |
AGGATGTTCTTGGTCAGTTA+CGG | + | chr5.1:75605519-75605538 | None:intergenic | 40.0% | |
CGCTTCATTTGTAGTGAAGT+TGG | + | chr5.1:75605876-75605895 | None:intergenic | 40.0% | |
CGTTGCCTCATAACCATAAT+AGG | - | chr5.1:75607319-75607338 | MS.gene63857:CDS | 40.0% | |
CTATTGCAGCAAGTCAAGTA+GGG | + | chr5.1:75606574-75606593 | None:intergenic | 40.0% | |
GATCACATATTCTCAGCCTA+AGG | - | chr5.1:75606114-75606133 | MS.gene63857:intron | 40.0% | |
GTCAATACTTGGCAGATTGA+AGG | - | chr5.1:75606967-75606986 | MS.gene63857:CDS | 40.0% | |
TAATCTACTGAGTTTCGCGT+AGG | + | chr5.1:75605744-75605763 | None:intergenic | 40.0% | |
TCACATATTCTCAGCCTAAG+GGG | - | chr5.1:75606116-75606135 | MS.gene63857:intron | 40.0% | |
TCAGTAGATTACATACTGGC+TGG | - | chr5.1:75605753-75605772 | MS.gene63857:intron | 40.0% | |
TCTGCCGGAAAGATATTTGT+CGG | - | chr5.1:75605836-75605855 | MS.gene63857:intron | 40.0% | |
TGACTAGGTTTGGATTCTGT+GGG | + | chr5.1:75606951-75606970 | None:intergenic | 40.0% | |
TGCCAAAATCAAACCCACTT+GGG | + | chr5.1:75606787-75606806 | None:intergenic | 40.0% | |
TTGACTAGGTTTGGATTCTG+TGG | + | chr5.1:75606952-75606971 | None:intergenic | 40.0% | |
TTGGCTCATTGGACCTATTA+TGG | + | chr5.1:75607335-75607354 | None:intergenic | 40.0% | |
TTGTGTGAGAGTCTAGACAT+AGG | + | chr5.1:75605591-75605610 | None:intergenic | 40.0% | |
TTTACAACTTCCCACAAGGT+TGG | - | chr5.1:75605352-75605371 | MS.gene63857:CDS | 40.0% | |
! | ATCAAGTCAGAGCATTCACA+AGG | + | chr5.1:75605641-75605660 | None:intergenic | 40.0% |
! | GAAGAACTCTGAGAAAGTCT+AGG | + | chr5.1:75607054-75607073 | None:intergenic | 40.0% |
!! | AACCCAAGTGGGTTTGATTT+TGG | - | chr5.1:75606782-75606801 | MS.gene63857:CDS | 40.0% |
!! | AGAATGTGGAATTTGTTGGG+GGG | + | chr5.1:75607076-75607095 | None:intergenic | 40.0% |
!! | AGTCTAGGACTTTTTGTTGG+GGG | + | chr5.1:75607039-75607058 | None:intergenic | 40.0% |
!! | ATAAGCATGACGGATTCACT+GGG | - | chr5.1:75607220-75607239 | MS.gene63857:CDS | 40.0% |
!! | ATCTTTGGAATCTTGACGTC+GGG | + | chr5.1:75605321-75605340 | None:intergenic | 40.0% |
!! | CAATCTGCCAAGTATTGACT+AGG | + | chr5.1:75606966-75606985 | None:intergenic | 40.0% |
!! | GAGAATGTGGAATTTGTTGG+GGG | + | chr5.1:75607077-75607096 | None:intergenic | 40.0% |
!! | GGAGCATTTCTGCCATATTT+TGG | + | chr5.1:75605295-75605314 | None:intergenic | 40.0% |
!! | TGCCAAGTATTGACTAGGTT+TGG | + | chr5.1:75606961-75606980 | None:intergenic | 40.0% |
ACATGCATGTTCCAACCTTG+TGG | + | chr5.1:75605366-75605385 | None:intergenic | 45.0% | |
ACCTTAAAAGCCGAGAATGG+AGG | - | chr5.1:75605708-75605727 | MS.gene63857:intron | 45.0% | |
ACGATGCCATGAAGATTGGT+TGG | - | chr5.1:75606035-75606054 | MS.gene63857:intron | 45.0% | |
ACTACAAATGAAGCGGGTGA+AGG | - | chr5.1:75605881-75605900 | MS.gene63857:intron | 45.0% | |
ACTGGGAATAGTTCAATGGC+AGG | - | chr5.1:75607237-75607256 | MS.gene63857:CDS | 45.0% | |
ATTATCCGACAGCTAGTGGT+TGG | - | chr5.1:75605981-75606000 | MS.gene63857:intron | 45.0% | |
CAGTTTGGCAAAGACCTCTT+CGG | + | chr5.1:75605486-75605505 | None:intergenic | 45.0% | |
CATGCATGTTCCAACCTTGT+GGG | + | chr5.1:75605365-75605384 | None:intergenic | 45.0% | |
CCTGACATAGAGCTAAACCT+TGG | - | chr5.1:75607276-75607295 | MS.gene63857:CDS | 45.0% | |
CTGGGAATAGTTCAATGGCA+GGG | - | chr5.1:75607238-75607257 | MS.gene63857:CDS | 45.0% | |
CTTCTGTGGACCCCAAAATA+TGG | - | chr5.1:75605280-75605299 | MS.gene63857:CDS | 45.0% | |
GAATCGAACCTGAGATCTCA+AGG | - | chr5.1:75606720-75606739 | MS.gene63857:CDS | 45.0% | |
GGAATGAAGGAGGAAGTTGA+CGG | + | chr5.1:75607135-75607154 | None:intergenic | 45.0% | |
GGATGTTCTTGGTCAGTTAC+GGG | + | chr5.1:75605518-75605537 | None:intergenic | 45.0% | |
GTGCCAAAATCAAACCCACT+TGG | + | chr5.1:75606788-75606807 | None:intergenic | 45.0% | |
GTGTATTATCCGACAGCTAG+TGG | - | chr5.1:75605977-75605996 | MS.gene63857:intron | 45.0% | |
GTTGACGATGCCATGAAGAT+TGG | - | chr5.1:75606031-75606050 | MS.gene63857:intron | 45.0% | |
TCCTCCTTCATTCCTATGCA+GGG | - | chr5.1:75607141-75607160 | MS.gene63857:CDS | 45.0% | |
TGGACGGTAACGATCAAGAA+TGG | + | chr5.1:75605414-75605433 | None:intergenic | 45.0% | |
TTCCTCCTTCATTCCTATGC+AGG | - | chr5.1:75607140-75607159 | MS.gene63857:CDS | 45.0% | |
! | ACCTCCATTCTCGGCTTTTA+AGG | + | chr5.1:75605712-75605731 | None:intergenic | 45.0% |
! | TAGTGGTTGGCGTGATTTTG+TGG | - | chr5.1:75605994-75606013 | MS.gene63857:intron | 45.0% |
! | TTTTGTTGGGGGGAAGTTGA+TGG | + | chr5.1:75607028-75607047 | None:intergenic | 45.0% |
!! | CCAAGGTTTAGCTCTATGTC+AGG | + | chr5.1:75607279-75607298 | None:intergenic | 45.0% |
!! | GATAAGCATGACGGATTCAC+TGG | - | chr5.1:75607219-75607238 | MS.gene63857:CDS | 45.0% |
!! | GTCTAGGACTTTTTGTTGGG+GGG | + | chr5.1:75607038-75607057 | None:intergenic | 45.0% |
!! | TCTTTGGAATCTTGACGTCG+GGG | + | chr5.1:75605320-75605339 | None:intergenic | 45.0% |
!! | TGTTTCCATCGTCGACTTCT+TGG | + | chr5.1:75605559-75605578 | None:intergenic | 45.0% |
!! | TTGCCTAGTGGTATTGGCTT+GGG | + | chr5.1:75606764-75606783 | None:intergenic | 45.0% |
!!! | CATATTTTGGGGTCCACAGA+AGG | + | chr5.1:75605282-75605301 | None:intergenic | 45.0% |
!!! | CCATTCTCGGCTTTTAAGGT+CGG | + | chr5.1:75605708-75605727 | None:intergenic | 45.0% |
!!! | GATTGCGGTTTTAGATGCAG+CGG | - | chr5.1:75605922-75605941 | MS.gene63857:intron | 45.0% |
ACAAATGAAGCGGGTGAAGG+AGG | - | chr5.1:75605884-75605903 | MS.gene63857:intron | 50.0% | |
ACCTCAAGCATGCGCCAATT+AGG | + | chr5.1:75606177-75606196 | None:intergenic | 50.0% | |
AGACTCGTCCAAGTCAAGCT+TGG | + | chr5.1:75605669-75605688 | None:intergenic | 50.0% | |
AGTTCAATGGCAGGGTTGAG+TGG | - | chr5.1:75607246-75607265 | MS.gene63857:CDS | 50.0% | |
ATACCACTAGGCAACCCAAG+TGG | - | chr5.1:75606770-75606789 | MS.gene63857:CDS | 50.0% | |
ATCTCAGGTTCGATTCTCGC+CGG | + | chr5.1:75606716-75606735 | None:intergenic | 50.0% | |
ATGAAGGAGGAAGTTGACGG+TGG | + | chr5.1:75607132-75607151 | None:intergenic | 50.0% | |
ATGGTGATTGTGGCAGCGTT+AGG | + | chr5.1:75605395-75605414 | None:intergenic | 50.0% | |
CCAAGAACATCCTCCTTCTG+TGG | - | chr5.1:75605526-75605545 | MS.gene63857:CDS | 50.0% | |
CCACAGAAGGAGGATGTTCT+TGG | + | chr5.1:75605529-75605548 | None:intergenic | 50.0% | |
CCGACCTTAAAAGCCGAGAA+TGG | - | chr5.1:75605705-75605724 | MS.gene63857:intron | 50.0% | |
CCTCAAGCATGCGCCAATTA+GGG | + | chr5.1:75606176-75606195 | None:intergenic | 50.0% | |
CGATGCATGGAATGGATGGA+CGG | + | chr5.1:75605430-75605449 | None:intergenic | 50.0% | |
CTAAACCTTGGCAGTCCTAG+AGG | - | chr5.1:75607288-75607307 | MS.gene63857:CDS | 50.0% | |
CTTGGTCAGTTACGGGAACT+AGG | + | chr5.1:75605511-75605530 | None:intergenic | 50.0% | |
GACGGTGGAGGCTGTAATTT+AGG | + | chr5.1:75607117-75607136 | None:intergenic | 50.0% | |
GACTCCCTGCATAGGAATGA+AGG | + | chr5.1:75607148-75607167 | None:intergenic | 50.0% | |
GACTCGTCCAAGTCAAGCTT+GGG | + | chr5.1:75605668-75605687 | None:intergenic | 50.0% | |
GAGACGATGCATGGAATGGA+TGG | + | chr5.1:75605434-75605453 | None:intergenic | 50.0% | |
GATCCCAAGCCAATACCACT+AGG | - | chr5.1:75606758-75606777 | MS.gene63857:CDS | 50.0% | |
GATCTTGCCCAAGCTTGACT+TGG | - | chr5.1:75605658-75605677 | MS.gene63857:CDS | 50.0% | |
TACCACTAGGCAACCCAAGT+GGG | - | chr5.1:75606771-75606790 | MS.gene63857:CDS | 50.0% | |
TACGGGAACTAGGAGCAGTT+TGG | + | chr5.1:75605501-75605520 | None:intergenic | 50.0% | |
TAGCCCACCTAAATTGGCAC+CGG | - | chr5.1:75606694-75606713 | MS.gene63857:CDS | 50.0% | |
TCATTCCTATGCAGGGAGTC+AGG | - | chr5.1:75607148-75607167 | MS.gene63857:CDS | 50.0% | |
TCCCTGCATAGGAATGAAGG+AGG | + | chr5.1:75607145-75607164 | None:intergenic | 50.0% | |
TCGAACCTGAGATCTCAAGG+AGG | - | chr5.1:75606723-75606742 | MS.gene63857:CDS | 50.0% | |
TGGTGATTGTGGCAGCGTTA+GGG | + | chr5.1:75605394-75605413 | None:intergenic | 50.0% | |
TGTTGATCCTCACACCGAAG+AGG | - | chr5.1:75605469-75605488 | MS.gene63857:CDS | 50.0% | |
TTTAGATGCAGCGGAACTGG+CGG | - | chr5.1:75605931-75605950 | MS.gene63857:intron | 50.0% | |
! | ATTCTCGCCGGTGCCAATTT+AGG | + | chr5.1:75606704-75606723 | None:intergenic | 50.0% |
! | CTTGGGTTGCCTAGTGGTAT+TGG | + | chr5.1:75606770-75606789 | None:intergenic | 50.0% |
! | TGGTTGGCGTGATTTTGTGG+TGG | - | chr5.1:75605997-75606016 | MS.gene63857:intron | 50.0% |
!! | AGGCTAGCTTTGTGCCCTAT+AGG | - | chr5.1:75606362-75606381 | MS.gene63857:intron | 50.0% |
!! | AGTGGTATTGGCTTGGGATC+TGG | + | chr5.1:75606758-75606777 | None:intergenic | 50.0% |
!! | GTGGTATTGGCTTGGGATCT+GGG | + | chr5.1:75606757-75606776 | None:intergenic | 50.0% |
!! | GTTGCCTAGTGGTATTGGCT+TGG | + | chr5.1:75606765-75606784 | None:intergenic | 50.0% |
!! | TCACTTGGTGCTTGGCTCAT+TGG | + | chr5.1:75607346-75607365 | None:intergenic | 50.0% |
!!! | ATTTTGGGGTCCACAGAAGG+TGG | + | chr5.1:75605279-75605298 | None:intergenic | 50.0% |
!!! | GGTTTTAGATGCAGCGGAAC+TGG | - | chr5.1:75605928-75605947 | MS.gene63857:intron | 50.0% |
AAGGAGGAAGTTGACGGTGG+AGG | + | chr5.1:75607129-75607148 | None:intergenic | 55.0% | |
AATGAAGCGGGTGAAGGAGG+AGG | - | chr5.1:75605887-75605906 | MS.gene63857:intron | 55.0% | |
ATGAAGCGGGTGAAGGAGGA+GGG | - | chr5.1:75605888-75605907 | MS.gene63857:intron | 55.0% | |
CATCCTCCTTCTGTGGTTCC+CGG | - | chr5.1:75605533-75605552 | MS.gene63857:CDS | 55.0% | |
CCCTAATTGGCGCATGCTTG+AGG | - | chr5.1:75606173-75606192 | MS.gene63857:CDS | 55.0% | |
GGCAGAGACGATGCATGGAA+TGG | + | chr5.1:75605438-75605457 | None:intergenic | 55.0% | |
GGTGATTGTGGCAGCGTTAG+GGG | + | chr5.1:75605393-75605412 | None:intergenic | 55.0% | |
GTGCTCCTCCTTGAGATCTC+AGG | + | chr5.1:75606731-75606750 | None:intergenic | 55.0% | |
TCAACGGCAGAGACGATGCA+TGG | + | chr5.1:75605443-75605462 | None:intergenic | 55.0% | |
TCACGCCAACCACTAGCTGT+CGG | + | chr5.1:75605989-75606008 | None:intergenic | 55.0% | |
TCATGCCTGACTCCCTGCAT+AGG | + | chr5.1:75607156-75607175 | None:intergenic | 55.0% | |
TCTTCCTCAGCCACCTTCTG+TGG | - | chr5.1:75605266-75605285 | MS.gene63857:CDS | 55.0% | |
! | AACCCACTTGGGTTGCCTAG+TGG | + | chr5.1:75606776-75606795 | None:intergenic | 55.0% |
! | ATGGTGGAGGAGGAAGTCGA+AGG | + | chr5.1:75607009-75607028 | None:intergenic | 55.0% |
! | GCAAAGACCTCTTCGGTGTG+AGG | + | chr5.1:75605479-75605498 | None:intergenic | 55.0% |
! | TCGCCGGTGCCAATTTAGGT+GGG | + | chr5.1:75606700-75606719 | None:intergenic | 55.0% |
!! | TCCATCGTCGACTTCTTGGC+CGG | + | chr5.1:75605555-75605574 | None:intergenic | 55.0% |
!! | TGTTGGGGGGAAGTTGATGG+TGG | + | chr5.1:75607025-75607044 | None:intergenic | 55.0% |
GGCAACGAGTCAGCACCTCT+AGG | + | chr5.1:75607306-75607325 | None:intergenic | 60.0% | |
TCTTGGCCGGGAACCACAGA+AGG | + | chr5.1:75605542-75605561 | None:intergenic | 60.0% | |
TGGAATCTTGACGTCGGGGC+CGG | + | chr5.1:75605316-75605335 | None:intergenic | 60.0% | |
! | CTCGCCGGTGCCAATTTAGG+TGG | + | chr5.1:75606701-75606720 | None:intergenic | 60.0% |
! | GAGGAGGAAGTCGAAGGTGC+AGG | + | chr5.1:75607003-75607022 | None:intergenic | 60.0% |
!! | CAGCACCTCTAGGACTGCCA+AGG | + | chr5.1:75607296-75607315 | None:intergenic | 60.0% |
!! | CCATCGTCGACTTCTTGGCC+GGG | + | chr5.1:75605554-75605573 | None:intergenic | 60.0% |
!! | GGGGAAGTTGATGGTGGAGG+AGG | + | chr5.1:75607019-75607038 | None:intergenic | 60.0% |
!! | TGGGGGGAAGTTGATGGTGG+AGG | + | chr5.1:75607022-75607041 | None:intergenic | 60.0% |
CCCGGCCAAGAAGTCGACGA+TGG | - | chr5.1:75605551-75605570 | MS.gene63857:CDS | 65.0% | |
GGGTCCACAGAAGGTGGCTG+AGG | + | chr5.1:75605273-75605292 | None:intergenic | 65.0% | |
TGGCCGGGAACCACAGAAGG+AGG | + | chr5.1:75605539-75605558 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 75605261 | 75607365 | 75605261 | ID=MS.gene63857 |
chr5.1 | mRNA | 75605261 | 75607365 | 75605261 | ID=MS.gene63857.t1;Parent=MS.gene63857 |
chr5.1 | exon | 75607136 | 75607365 | 75607136 | ID=MS.gene63857.t1.exon1;Parent=MS.gene63857.t1 |
chr5.1 | CDS | 75607136 | 75607365 | 75607136 | ID=cds.MS.gene63857.t1;Parent=MS.gene63857.t1 |
chr5.1 | exon | 75606432 | 75607001 | 75606432 | ID=MS.gene63857.t1.exon2;Parent=MS.gene63857.t1 |
chr5.1 | CDS | 75606432 | 75607001 | 75606432 | ID=cds.MS.gene63857.t1;Parent=MS.gene63857.t1 |
chr5.1 | exon | 75606126 | 75606192 | 75606126 | ID=MS.gene63857.t1.exon3;Parent=MS.gene63857.t1 |
chr5.1 | CDS | 75606126 | 75606192 | 75606126 | ID=cds.MS.gene63857.t1;Parent=MS.gene63857.t1 |
chr5.1 | exon | 75605261 | 75605701 | 75605261 | ID=MS.gene63857.t1.exon4;Parent=MS.gene63857.t1 |
chr5.1 | CDS | 75605261 | 75605701 | 75605261 | ID=cds.MS.gene63857.t1;Parent=MS.gene63857.t1 |
Gene Sequence |
Protein sequence |