AlfalfaGEDB | MS.gene64110

M. sativa cultivar XinJiangDaYe / MS.gene64110

KEGG: K13424
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64110.t1	RHN56682.1	77.6	165	28	2	1	157	48	211	1.10E-61	246.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64110.t1	Q6B6R4	43.8	112	51	1	45	144	215	326	2.5e-19	96.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64110.t1	G7IXC7	77.6	165	28	2	1	157	164	327	7.7e-62	246.1

TFs/TRs:

Gene ID	Type	Classification
MS.gene64110.t1	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64110.t1	MTR_5g074200	77.576	165	28	2	1	157	164	327	7.25e-87	257
MS.gene64110.t1	MTR_5g093540	73.239	142	22	1	16	157	124	249	9.46e-67	203
MS.gene64110.t1	MTR_5g074400	41.611	149	81	3	12	157	207	352	9.84e-29	110
MS.gene64110.t1	MTR_5g074400	57.895	57	23	1	50	105	420	476	7.41e-16	73.9
MS.gene64110.t1	MTR_3g031220	42.105	133	66	4	29	157	176	301	1.77e-24	97.4
MS.gene64110.t1	MTR_3g031220	42.857	133	65	4	29	157	176	301	3.25e-24	97.8
MS.gene64110.t1	MTR_3g031220	54.386	57	25	1	50	105	365	421	8.17e-14	68.2
MS.gene64110.t1	MTR_7g071120	57.746	71	30	0	43	113	159	229	1.33e-22	93.2
MS.gene64110.t1	MTR_7g071120	54.386	57	25	1	50	105	324	380	4.51e-14	68.9
MS.gene64110.t1	MTR_7g100510	68.421	57	18	0	51	107	190	246	3.32e-22	91.7
MS.gene64110.t1	MTR_7g100510	51.786	56	26	1	51	105	362	417	5.85e-12	62.8
MS.gene64110.t1	MTR_5g073850	67.692	65	12	2	1	57	96	159	3.33e-21	84.7
MS.gene64110.t1	MTR_4g013260	43.860	114	58	5	35	145	168	278	2.64e-20	86.7
MS.gene64110.t1	MTR_4g013260	52.632	57	26	1	50	105	336	392	7.35e-13	65.5
MS.gene64110.t1	MTR_3g056100	55.556	72	31	1	50	121	99	169	2.92e-20	86.3
MS.gene64110.t1	MTR_3g056100	52.632	57	26	1	50	105	271	327	6.13e-14	68.6
MS.gene64110.t1	MTR_3g056100	55.556	72	31	1	50	121	99	169	2.99e-20	86.3
MS.gene64110.t1	MTR_3g056100	52.632	57	26	1	50	105	258	314	5.99e-14	68.6
MS.gene64110.t1	MTR_7g080020	60.938	64	25	0	50	113	280	343	3.21e-20	86.7
MS.gene64110.t1	MTR_7g080020	48.611	72	35	2	50	119	493	564	5.04e-14	68.9
MS.gene64110.t1	MTR_5g042920	60.000	65	25	1	50	114	151	214	5.79e-20	85.5
MS.gene64110.t1	MTR_5g042920	43.011	93	50	2	50	141	320	410	4.00e-15	71.6
MS.gene64110.t1	MTR_5g094430	59.677	62	25	0	50	111	200	261	2.38e-19	84.0
MS.gene64110.t1	MTR_5g094430	52.632	57	26	1	50	105	364	420	4.15e-14	68.9
MS.gene64110.t1	MTR_5g094430	59.677	62	25	0	50	111	88	149	2.81e-19	83.6
MS.gene64110.t1	MTR_5g094430	52.632	57	26	1	50	105	252	308	6.76e-14	68.2
MS.gene64110.t1	MTR_5g094430	59.677	62	25	0	50	111	66	127	2.87e-19	83.6
MS.gene64110.t1	MTR_5g094430	52.632	57	26	1	50	105	230	286	6.56e-14	68.2
MS.gene64110.t1	MTR_3g009470	57.812	64	27	0	50	113	280	343	3.38e-19	83.6
MS.gene64110.t1	MTR_3g056100	59.375	64	26	0	50	113	243	306	4.95e-18	80.1
MS.gene64110.t1	MTR_3g056100	52.632	57	26	1	50	105	402	458	5.53e-12	62.8
MS.gene64110.t1	MTR_3g056100	59.375	64	26	0	50	113	243	306	5.33e-18	80.1
MS.gene64110.t1	MTR_3g056100	52.632	57	26	1	50	105	415	471	6.05e-12	62.8
MS.gene64110.t1	MTR_7g080000	57.143	63	27	0	51	113	235	297	7.62e-18	79.7
MS.gene64110.t1	MTR_7g080000	52.632	57	26	1	50	105	432	488	1.79e-13	67.0
MS.gene64110.t1	MTR_7g011820	65.517	58	20	0	50	107	228	285	1.03e-17	79.3
MS.gene64110.t1	MTR_7g011820	40.741	108	49	5	50	150	410	509	7.52e-13	65.5
MS.gene64110.t1	MTR_3g009470	57.812	64	27	0	50	113	280	343	3.89e-17	77.8
MS.gene64110.t1	MTR_3g009470	54.386	57	25	1	50	105	495	551	3.71e-12	63.5
MS.gene64110.t1	MTR_4g082580	57.895	57	23	1	50	105	145	201	3.97e-16	74.3
MS.gene64110.t1	MTR_4g082580	42.697	89	49	2	50	136	278	366	1.34e-15	73.2
MS.gene64110.t1	MTR_1g077780	50.000	64	30	2	50	112	62	124	1.66e-14	67.0
MS.gene64110.t1	MTR_3g106060	37.209	86	48	3	51	130	139	224	1.54e-13	66.6
MS.gene64110.t1	MTR_5g097490	39.474	76	46	0	51	126	93	168	3.82e-13	65.9
MS.gene64110.t1	MTR_5g097490	45.614	57	30	1	50	105	252	308	6.90e-12	62.4
MS.gene64110.t1	MTR_8g007270	52.632	57	26	1	50	105	154	210	4.92e-13	64.7
MS.gene64110.t1	MTR_3g095080	50.877	57	27	1	50	105	168	224	5.03e-13	64.7
MS.gene64110.t1	MTR_2g033820	42.667	75	41	2	44	116	196	270	5.05e-13	65.9
MS.gene64110.t1	MTR_8g092140	50.877	57	27	1	50	105	160	216	6.23e-13	64.3
MS.gene64110.t1	MTR_3g095080	50.877	57	27	1	50	105	144	200	6.85e-13	63.9
MS.gene64110.t1	MTR_6g046600	68.293	41	13	0	67	107	19	59	1.02e-12	61.6
MS.gene64110.t1	MTR_4g094412	50.000	58	27	2	50	105	234	291	1.61e-12	64.3
MS.gene64110.t1	MTR_4g094412	50.000	58	27	2	50	105	243	300	1.68e-12	64.3
MS.gene64110.t1	MTR_7g079010	49.123	57	28	1	50	105	141	197	2.51e-12	62.4
MS.gene64110.t1	MTR_4g107970	36.082	97	50	4	14	105	146	235	2.80e-12	63.5
MS.gene64110.t1	MTR_4g107970	36.082	97	50	4	14	105	223	312	3.62e-12	63.5
MS.gene64110.t1	MTR_5g091390	49.180	61	29	2	47	105	153	213	4.35e-12	62.8
MS.gene64110.t1	MTR_8g096730	47.368	57	29	1	50	105	70	126	4.99e-12	60.5
MS.gene64110.t1	MTR_7g028415	40.260	77	43	2	50	123	93	169	5.67e-12	60.8
MS.gene64110.t1	MTR_7g028710	40.260	77	43	2	50	123	93	169	5.67e-12	60.8
MS.gene64110.t1	MTR_4g130900	44.643	56	30	1	51	105	360	415	8.65e-12	62.4
MS.gene64110.t1	MTR_2g105060	43.860	57	30	2	51	105	95	151	1.04e-11	61.2
MS.gene64110.t1	MTR_2g105060	43.860	57	30	2	51	105	170	226	1.30e-11	61.6
MS.gene64110.t1	MTR_1g086790	45.902	61	31	2	47	105	154	214	2.33e-11	60.8
MS.gene64110.t1	MTR_7g009730	48.276	58	28	2	50	105	219	276	2.81e-11	60.8
MS.gene64110.t1	MTR_7g109800	41.463	82	43	3	47	126	141	219	3.11e-11	60.1
MS.gene64110.t1	MTR_3g104750	45.614	57	30	1	50	105	104	160	3.35e-11	58.5
MS.gene64110.t1	MTR_8g092010	42.857	77	40	2	33	105	88	164	3.63e-11	58.9
MS.gene64110.t1	MTR_4g122530	49.123	57	28	1	50	105	208	264	3.92e-11	60.5
MS.gene64110.t1	MTR_5g097500	42.667	75	43	0	38	112	71	145	6.25e-11	59.3
MS.gene64110.t1	MTR_4g094588	38.095	84	49	3	50	131	178	260	8.72e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64110.t1	AT5G07100	48.571	105	40	4	50	152	24	116	3.40e-23	91.3
MS.gene64110.t1	AT5G07100	54.386	57	25	1	50	105	141	197	9.85e-15	68.9
MS.gene64110.t1	AT5G07100	48.571	105	40	4	50	152	24	116	3.40e-23	91.3
MS.gene64110.t1	AT5G07100	54.386	57	25	1	50	105	141	197	9.85e-15	68.9
MS.gene64110.t1	AT5G07100	48.571	105	40	4	50	152	24	116	3.40e-23	91.3
MS.gene64110.t1	AT5G07100	54.386	57	25	1	50	105	141	197	9.85e-15	68.9
MS.gene64110.t1	AT5G07100	48.571	105	40	4	50	152	24	116	3.40e-23	91.3
MS.gene64110.t1	AT5G07100	54.386	57	25	1	50	105	141	197	9.85e-15	68.9
MS.gene64110.t1	AT5G07100	60.000	70	26	2	50	118	117	185	5.59e-23	92.4
MS.gene64110.t1	AT5G07100	54.386	57	25	1	50	105	234	290	8.40e-15	70.5
MS.gene64110.t1	AT2G38470	63.793	58	21	0	50	107	184	241	3.55e-22	92.0
MS.gene64110.t1	AT2G38470	54.386	57	25	1	50	105	362	418	1.75e-13	67.4
MS.gene64110.t1	AT1G13960	64.286	56	20	0	50	105	76	131	6.09e-21	87.8
MS.gene64110.t1	AT1G13960	54.386	57	25	1	50	105	256	312	4.48e-15	71.6
MS.gene64110.t1	AT2G37260	54.412	68	31	0	51	118	86	153	1.67e-20	86.3
MS.gene64110.t1	AT2G37260	54.412	68	31	0	51	118	84	151	1.87e-20	86.3
MS.gene64110.t1	AT2G37260	54.412	68	31	0	51	118	166	233	1.99e-20	86.7
MS.gene64110.t1	AT4G26640	62.069	58	22	0	50	107	171	228	1.62e-19	84.3
MS.gene64110.t1	AT4G26640	44.186	86	45	2	50	134	341	424	3.44e-14	69.3
MS.gene64110.t1	AT4G26640	62.069	58	22	0	50	107	211	268	1.81e-19	84.3
MS.gene64110.t1	AT4G26640	44.186	86	45	2	50	134	381	464	3.43e-14	69.3
MS.gene64110.t1	AT4G26640	62.069	58	22	0	50	107	139	196	2.05e-19	84.3
MS.gene64110.t1	AT4G26640	44.186	86	45	2	50	134	309	392	3.62e-14	69.3
MS.gene64110.t1	AT4G26640	62.069	58	22	0	50	107	35	92	2.42e-19	83.6
MS.gene64110.t1	AT4G26640	44.186	86	45	2	50	134	205	288	3.27e-14	68.9
MS.gene64110.t1	AT4G26640	62.069	58	22	0	50	107	35	92	2.42e-19	83.6
MS.gene64110.t1	AT4G26640	44.186	86	45	2	50	134	205	288	3.27e-14	68.9
MS.gene64110.t1	AT4G26640	62.069	58	22	0	50	107	35	92	2.42e-19	83.6
MS.gene64110.t1	AT4G26640	44.186	86	45	2	50	134	205	288	3.27e-14	68.9
MS.gene64110.t1	AT4G26640	62.069	58	22	0	50	107	35	92	2.42e-19	83.6
MS.gene64110.t1	AT4G26640	44.186	86	45	2	50	134	205	288	3.27e-14	68.9
MS.gene64110.t1	AT4G26440	62.069	58	22	0	50	107	178	235	4.93e-19	83.2
MS.gene64110.t1	AT4G26440	45.238	84	42	2	50	129	372	455	1.51e-12	64.7
MS.gene64110.t1	AT2G30250	45.833	96	46	2	48	138	164	258	7.98e-19	82.0
MS.gene64110.t1	AT2G30250	47.692	65	32	2	51	114	329	392	1.58e-13	67.0
MS.gene64110.t1	AT3G01080	62.500	56	21	0	50	105	205	260	9.35e-19	81.3
MS.gene64110.t1	AT5G56270	63.793	58	21	0	50	107	273	330	9.51e-19	82.4
MS.gene64110.t1	AT5G56270	56.140	57	24	1	50	105	487	543	2.06e-13	67.0
MS.gene64110.t1	AT1G13960	64.286	56	20	0	50	105	229	284	1.35e-18	82.0
MS.gene64110.t1	AT1G13960	54.386	57	25	1	50	105	409	465	8.73e-13	65.1
MS.gene64110.t1	AT3G01080	62.500	56	21	0	50	105	205	260	4.15e-18	80.5
MS.gene64110.t1	AT3G01080	56.140	57	24	1	50	105	344	400	1.99e-16	75.5
MS.gene64110.t1	AT3G01080	62.500	56	21	0	50	105	167	222	4.93e-18	80.1
MS.gene64110.t1	AT3G01080	56.140	57	24	1	50	105	306	362	2.65e-16	75.1
MS.gene64110.t1	AT2G03340	62.500	56	21	0	50	105	250	305	1.22e-17	79.3
MS.gene64110.t1	AT2G03340	54.386	57	25	1	50	105	415	471	1.37e-12	64.7
MS.gene64110.t1	AT2G04880	50.000	64	31	1	50	112	111	174	4.35e-17	77.4
MS.gene64110.t1	AT2G04880	47.368	57	29	1	50	105	283	339	2.01e-11	61.2
MS.gene64110.t1	AT2G04880	50.000	64	31	1	50	112	111	174	4.70e-17	77.4
MS.gene64110.t1	AT2G04880	47.368	57	29	1	50	105	307	363	2.00e-11	61.2
MS.gene64110.t1	AT4G12020	48.529	68	33	1	38	105	458	523	1.04e-15	73.9
MS.gene64110.t1	AT4G12020	48.529	68	33	1	38	105	458	523	1.05e-15	73.9
MS.gene64110.t1	AT4G12020	48.529	68	33	1	38	105	458	523	1.13e-15	73.6
MS.gene64110.t1	AT4G12020	48.529	68	33	1	38	105	458	523	1.13e-15	73.6
MS.gene64110.t1	AT4G12020	48.529	68	33	1	38	105	458	523	1.17e-15	73.6
MS.gene64110.t1	AT4G12020	48.529	68	33	1	38	105	458	523	1.17e-15	73.6
MS.gene64110.t1	AT4G12020	48.529	68	33	1	38	105	458	523	1.26e-15	73.6
MS.gene64110.t1	AT4G12020	48.529	68	33	1	38	105	458	523	1.26e-15	73.6
MS.gene64110.t1	AT4G12020	48.529	68	33	1	38	105	458	523	1.26e-15	73.6
MS.gene64110.t1	AT4G12020	48.529	68	33	1	38	105	391	456	1.33e-15	73.6
MS.gene64110.t1	AT4G12020	48.529	68	33	1	38	105	458	523	1.42e-15	73.6
MS.gene64110.t1	AT5G13080	49.123	57	28	1	50	105	67	123	1.11e-14	67.4
MS.gene64110.t1	AT1G55600	52.542	59	27	1	48	105	305	363	6.70e-14	68.6
MS.gene64110.t1	AT1G64000	37.805	82	42	2	33	105	89	170	1.10e-13	65.9
MS.gene64110.t1	AT2G44745	52.632	57	26	1	50	105	145	201	3.77e-13	64.7
MS.gene64110.t1	AT5G41570	47.368	57	29	1	50	105	98	154	5.35e-13	63.5
MS.gene64110.t1	AT1G29860	41.250	80	44	3	44	121	129	207	8.45e-13	64.7
MS.gene64110.t1	AT2G21900	36.082	97	52	2	10	105	78	165	1.33e-12	63.2
MS.gene64110.t1	AT2G46130	49.123	57	28	1	50	105	30	86	1.99e-12	60.5
MS.gene64110.t1	AT2G25000	39.394	66	38	2	51	114	104	169	3.90e-12	62.0
MS.gene64110.t1	AT2G25000	39.394	66	38	2	51	114	104	169	3.90e-12	62.0
MS.gene64110.t1	AT2G25000	39.394	66	38	2	51	114	126	191	4.16e-12	62.4
MS.gene64110.t1	AT5G49520	49.153	59	29	1	48	105	219	277	6.44e-12	62.8
MS.gene64110.t1	AT2G25000	39.394	66	38	2	51	114	147	212	6.83e-12	62.0
MS.gene64110.t1	AT1G68150	48.276	58	28	2	50	105	235	292	8.71e-12	62.0
MS.gene64110.t1	AT4G39410	49.123	57	28	1	50	105	223	279	9.84e-12	61.6
MS.gene64110.t1	AT4G30935	42.857	56	31	1	51	105	332	387	2.18e-11	61.2
MS.gene64110.t1	AT5G15130	36.667	90	46	3	27	105	195	284	2.35e-11	61.2
MS.gene64110.t1	AT4G18170	45.902	61	31	2	47	105	168	228	2.40e-11	60.8
MS.gene64110.t1	AT5G26170	43.333	60	33	1	50	108	113	172	3.52e-11	58.5
MS.gene64110.t1	AT2G47260	39.241	79	45	3	47	123	170	247	6.42e-11	59.7
MS.gene64110.t1	AT5G64810	45.161	62	33	1	50	110	110	171	7.79e-11	58.2
MS.gene64110.t1	AT5G46350	35.000	100	60	2	50	144	183	282	8.77e-11	59.3

Find 18 sgRNAs with CRISPR-Local

Find 21 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACCATGATGATGGGTATAAT+TGG	0.246954	5.1:+50202421	MS.gene64110:CDS
TTCGTTCAAAATTTGATTCT+CGG	0.288568	5.1:+50202286	MS.gene64110:CDS
ATCATTTGGAAGTGAACAAT+TGG	0.346812	5.1:+50202689	MS.gene64110:CDS
ACTGATACTGAAGACTTTGC+AGG	0.370357	5.1:-50202726	None:intergenic
AAAATTTGTCTTTAAGAAGA+AGG	0.406219	5.1:+50202394	MS.gene64110:CDS
GAGTTGCAAGATCAATCATT+TGG	0.447335	5.1:+50202675	MS.gene64110:CDS
AAGAGAAAGTAGCAAAAGGA+AGG	0.448078	5.1:+50202454	MS.gene64110:CDS
AAGGTTGAGATAACTATAGA+TGG	0.449611	5.1:+50202531	MS.gene64110:CDS
AGAAGGATAAACCATGATGA+TGG	0.457113	5.1:+50202411	MS.gene64110:CDS
TATGAAGAGAAAGTAGCAAA+AGG	0.459364	5.1:+50202450	MS.gene64110:CDS
TCCAATTATACCCATCATCA+TGG	0.461024	5.1:-50202422	None:intergenic
CGAAATTGAAACTCTGAGAA+TGG	0.484934	5.1:+50202311	MS.gene64110:CDS
AGCTAGCGTCTTCAATGAAG+AGG	0.558266	5.1:+50202598	MS.gene64110:CDS
GAAGGATAAACCATGATGAT+GGG	0.572923	5.1:+50202412	MS.gene64110:CDS
AGAGAAAGTAGCAAAAGGAA+GGG	0.578563	5.1:+50202455	MS.gene64110:CDS
TCAATGAGAGCAGTCTCTGA+AGG	0.593446	5.1:-50202654	None:intergenic
GAAGCTATTATAAATGTACA+TGG	0.617639	5.1:+50202487	MS.gene64110:CDS
ATTATTGAGACACTATACAA+AGG	0.688284	5.1:+50202558	MS.gene64110:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAATTTGTCTTTAAGAAGA+AGG	+	chr5.1:50202394-50202413	MS.gene64110:CDS	20.0%
!!!	TAATTGTTTTGTGAAGAAAA+AGG	+	chr5.1:50202512-50202531	MS.gene64110:CDS	20.0%
!!!	TTCTTAAAGACAAATTTTGT+TGG	-	chr5.1:50202392-50202411	None:intergenic	20.0%
!!!	TTTTTCTTCACAAAACAATT+AGG	-	chr5.1:50202513-50202532	None:intergenic	20.0%
!	ATTATTGAGACACTATACAA+AGG	+	chr5.1:50202558-50202577	MS.gene64110:CDS	25.0%
!	GAAGCTATTATAAATGTACA+TGG	+	chr5.1:50202487-50202506	MS.gene64110:CDS	25.0%
!	TTCGTTCAAAATTTGATTCT+CGG	+	chr5.1:50202286-50202305	MS.gene64110:CDS	25.0%
	AAGGTTGAGATAACTATAGA+TGG	+	chr5.1:50202531-50202550	MS.gene64110:CDS	30.0%
	ATCATTTGGAAGTGAACAAT+TGG	+	chr5.1:50202689-50202708	MS.gene64110:CDS	30.0%
	TATGAAGAGAAAGTAGCAAA+AGG	+	chr5.1:50202450-50202469	MS.gene64110:CDS	30.0%
	AAGAGAAAGTAGCAAAAGGA+AGG	+	chr5.1:50202454-50202473	MS.gene64110:CDS	35.0%
	AGAAGGATAAACCATGATGA+TGG	+	chr5.1:50202411-50202430	MS.gene64110:CDS	35.0%
	AGAGAAAGTAGCAAAAGGAA+GGG	+	chr5.1:50202455-50202474	MS.gene64110:CDS	35.0%
	GAAGGATAAACCATGATGAT+GGG	+	chr5.1:50202412-50202431	MS.gene64110:CDS	35.0%
	GAGTTGCAAGATCAATCATT+TGG	+	chr5.1:50202675-50202694	MS.gene64110:CDS	35.0%
	TCCAATTATACCCATCATCA+TGG	-	chr5.1:50202425-50202444	None:intergenic	35.0%
!	CGAAATTGAAACTCTGAGAA+TGG	+	chr5.1:50202311-50202330	MS.gene64110:CDS	35.0%
!!	ACCATGATGATGGGTATAAT+TGG	+	chr5.1:50202421-50202440	MS.gene64110:CDS	35.0%
	ACTGATACTGAAGACTTTGC+AGG	-	chr5.1:50202729-50202748	None:intergenic	40.0%
	AGCTAGCGTCTTCAATGAAG+AGG	+	chr5.1:50202598-50202617	MS.gene64110:CDS	45.0%
	TCAATGAGAGCAGTCTCTGA+AGG	-	chr5.1:50202657-50202676	None:intergenic	45.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.1	gene	50202279	50202752	50202279	ID=MS.gene64110
chr5.1	mRNA	50202279	50202752	50202279	ID=MS.gene64110.t1;Parent=MS.gene64110
chr5.1	exon	50202279	50202752	50202279	ID=MS.gene64110.t1.exon1;Parent=MS.gene64110.t1
chr5.1	CDS	50202279	50202752	50202279	ID=cds.MS.gene64110.t1;Parent=MS.gene64110.t1

Gene Sequence

>MS.gene64110

ATGATTCTTCGTTCAAAATTTGATTCTCGGAACGAAATTGAAACTCTGAGAATGGAAGCTGATGATATAGCTATAGAAGTTGATGCTGCAGATAGCAACAGAAATGAATTCCAACAAAATTTGTCTTTAAGAAGAAGGATAAACCATGATGATGGGTATAATTGGAAAAAGTATGAAGAGAAAGTAGCAAAAGGAAGGGAAAATCAAAGAAGCTATTATAAATGTACATGGCCTAATTGTTTTGTGAAGAAAAAGGTTGAGATAACTATAGATGGAGAAATTATTGAGACACTATACAAAGGTACACATAATCATTGTAAGCTAGCGTCTTCAATGAAGAGGATCTCATCATCTGAGTATCTTTATTCACTTTTACCTTCAGAGACTGCTCTCATTGAGTTGCAAGATCAATCATTTGGAAGTGAACAATTGGATTCTGATGAAGAACCTGCAAAGTCTTCAGTATCAGTATGA

Protein sequence

>MS.gene64110.t1

MILRSKFDSRNEIETLRMEADDIAIEVDAADSNRNEFQQNLSLRRRINHDDGYNWKKYEEKVAKGRENQRSYYKCTWPNCFVKKKVEITIDGEIIETLYKGTHNHCKLASSMKRISSSEYLYSLLPSETALIELQDQSFGSEQLDSDEEPAKSSVSV