AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene64161

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64161.t1 MTR_6g087920 91.824 159 13 0 1 159 1 159 9.73e-107 311
MS.gene64161.t1 MTR_8g103240 59.006 161 60 1 5 159 7 167 2.08e-62 199
MS.gene64161.t1 MTR_1g076370 33.133 166 98 5 1 154 1 165 2.23e-20 86.7
MS.gene64161.t1 MTR_3g054080 35.461 141 77 3 26 154 20 158 3.50e-20 86.3
MS.gene64161.t1 MTR_1g040875 34.000 150 87 3 16 154 20 168 5.67e-20 85.5
MS.gene64161.t1 MTR_6g080470 34.667 150 86 3 15 154 9 156 6.11e-20 85.5
MS.gene64161.t1 MTR_8g099770 34.437 151 89 3 14 154 84 234 7.72e-20 85.5
MS.gene64161.t1 MTR_8g092290 34.868 152 89 4 20 161 141 292 2.58e-19 84.0
MS.gene64161.t1 MTR_4g078290 34.211 152 88 5 14 154 123 273 2.67e-19 84.0
MS.gene64161.t1 MTR_4g078290 34.211 152 88 5 14 154 123 273 2.74e-19 84.0
MS.gene64161.t1 MTR_6g013030 35.099 151 88 3 14 154 104 254 2.93e-19 84.0
MS.gene64161.t1 MTR_1g098300 35.862 145 83 3 20 154 126 270 4.39e-19 83.6
MS.gene64161.t1 MTR_3g072320 33.108 148 87 5 16 154 8 152 5.32e-19 82.8
MS.gene64161.t1 MTR_4g007750 35.976 164 76 7 19 154 3 165 5.53e-19 82.0
MS.gene64161.t1 MTR_4g029020 31.544 149 90 4 16 154 8 154 6.17e-19 82.8
MS.gene64161.t1 MTR_8g012450 34.028 144 83 5 20 154 4 144 1.58e-18 81.3
MS.gene64161.t1 MTR_1g048630 33.333 144 87 4 19 154 6 148 1.77e-18 81.6
MS.gene64161.t1 MTR_5g026960 32.639 144 87 4 19 154 3 144 2.16e-18 81.3
MS.gene64161.t1 MTR_8g012450 34.028 144 83 5 20 154 4 144 2.19e-18 81.3
MS.gene64161.t1 MTR_2g090405 34.437 151 89 4 14 154 135 285 2.97e-18 81.3
MS.gene64161.t1 MTR_5g008860 34.839 155 91 4 14 158 134 288 3.29e-18 80.9
MS.gene64161.t1 MTR_2g085200 34.437 151 89 3 14 154 128 278 3.96e-18 80.9
MS.gene64161.t1 MTR_3g098760 33.775 151 90 3 14 154 91 241 4.90e-18 80.5
MS.gene64161.t1 MTR_1g075610 33.987 153 83 4 20 154 18 170 8.04e-18 79.0
MS.gene64161.t1 MTR_7g011800 32.895 152 90 5 14 154 114 264 1.04e-17 79.3
MS.gene64161.t1 MTR_1g103760 32.886 149 88 5 16 154 8 154 1.50e-17 79.0
MS.gene64161.t1 MTR_2g021330 36.242 149 83 4 18 154 23 171 2.66e-17 78.2
MS.gene64161.t1 MTR_2g016340 31.757 148 91 3 16 154 8 154 2.74e-17 78.2
MS.gene64161.t1 MTR_4g109090 31.788 151 93 3 14 154 99 249 3.15e-17 78.2
MS.gene64161.t1 MTR_2g021330 36.242 149 83 4 18 154 23 171 3.51e-17 77.8
MS.gene64161.t1 MTR_7g072575 32.895 152 84 5 16 154 8 154 4.00e-17 77.8
MS.gene64161.t1 MTR_2g020210 34.437 151 89 3 14 154 96 246 4.42e-17 77.8
MS.gene64161.t1 MTR_3g460950 33.540 161 93 5 6 154 20 178 5.35e-17 77.0
MS.gene64161.t1 MTR_3g060330 33.540 161 93 5 6 154 20 178 5.35e-17 77.0
MS.gene64161.t1 MTR_4g117490 36.242 149 83 4 18 154 23 171 5.39e-17 77.4
MS.gene64161.t1 MTR_3g040520 33.962 159 81 6 20 154 25 183 1.06e-16 76.6
MS.gene64161.t1 MTR_3g089510 35.333 150 85 4 17 154 10 159 1.12e-16 76.6
MS.gene64161.t1 MTR_3g089510 35.333 150 85 4 17 154 22 171 1.15e-16 76.6
MS.gene64161.t1 MTR_4g117490 36.242 149 83 4 18 154 23 171 1.25e-16 76.3
MS.gene64161.t1 MTR_4g114670 32.667 150 82 6 19 154 10 154 1.29e-16 75.9
MS.gene64161.t1 MTR_6g079470 34.667 150 86 4 17 154 86 235 1.32e-16 76.3
MS.gene64161.t1 MTR_4g114670 32.667 150 82 6 19 154 10 154 1.61e-16 75.9
MS.gene64161.t1 MTR_4g131060 28.767 146 92 4 19 154 17 160 2.33e-16 75.5
MS.gene64161.t1 MTR_2g072840 34.667 150 86 4 17 154 22 171 2.57e-16 75.5
MS.gene64161.t1 MTR_8g024600 31.288 163 92 6 7 154 3 160 4.70e-16 74.7
MS.gene64161.t1 MTR_3g040810 32.704 159 83 6 20 154 23 181 4.73e-16 74.7
MS.gene64161.t1 MTR_2g049790 32.653 147 86 6 19 154 22 166 4.77e-16 74.7
MS.gene64161.t1 MTR_5g091680 34.000 150 87 4 17 154 19 168 5.99e-16 74.3
MS.gene64161.t1 MTR_3g112210 32.692 156 93 4 11 154 23 178 6.09e-16 73.9
MS.gene64161.t1 MTR_5g091680 34.000 150 87 4 17 154 19 168 6.90e-16 74.3
MS.gene64161.t1 MTR_5g091680 34.000 150 87 4 17 154 19 168 7.00e-16 74.3
MS.gene64161.t1 MTR_5g088350 33.121 157 89 7 12 154 2 156 8.40e-16 73.9
MS.gene64161.t1 MTR_5g088350 33.121 157 89 7 12 154 2 156 8.50e-16 73.6
MS.gene64161.t1 MTR_5g091680 34.000 150 87 4 17 154 17 166 8.52e-16 73.9
MS.gene64161.t1 MTR_8g024590 32.000 150 83 5 19 154 16 160 8.65e-16 73.9
MS.gene64161.t1 MTR_4g118780 31.788 151 93 3 14 154 98 248 8.84e-16 73.9
MS.gene64161.t1 MTR_1g081870 31.788 151 93 3 14 154 116 266 1.18e-15 73.6
MS.gene64161.t1 MTR_5g088350 33.121 157 89 7 12 154 2 156 1.20e-15 73.6
MS.gene64161.t1 MTR_5g067150 34.014 147 84 6 19 154 8 152 1.22e-15 73.6
MS.gene64161.t1 MTR_5g067150 34.014 147 84 6 19 154 8 152 1.29e-15 73.2
MS.gene64161.t1 MTR_5g067150 34.014 147 84 6 19 154 8 152 1.49e-15 73.2
MS.gene64161.t1 MTR_2g072840 34.459 148 85 4 19 154 24 171 1.75e-15 73.2
MS.gene64161.t1 MTR_4g006970 28.049 164 106 4 1 154 1 162 1.94e-15 72.8
MS.gene64161.t1 MTR_3g466480 33.784 148 88 5 16 154 17 163 2.10e-15 72.8
MS.gene64161.t1 MTR_4g094430 33.108 148 85 6 19 154 3 148 2.24e-15 72.0
MS.gene64161.t1 MTR_5g075100 32.653 147 86 5 19 154 22 166 2.26e-15 72.8
MS.gene64161.t1 MTR_7g114300 32.026 153 90 4 14 154 101 251 2.46e-15 72.8
MS.gene64161.t1 MTR_4g061130 33.987 153 88 5 15 154 33 185 2.55e-15 72.4
MS.gene64161.t1 MTR_1g013700 31.507 146 88 4 19 154 12 155 3.14e-15 72.0
MS.gene64161.t1 MTR_7g114300 32.026 153 90 4 14 154 101 251 3.22e-15 72.0
MS.gene64161.t1 MTR_7g114300 31.373 153 91 3 14 154 101 251 3.23e-15 72.0
MS.gene64161.t1 MTR_8g461040 34.000 150 87 4 17 154 23 172 4.55e-15 72.0
MS.gene64161.t1 MTR_7g114300 32.026 153 90 4 14 154 101 251 5.04e-15 71.6
MS.gene64161.t1 MTR_8g086000 33.121 157 91 4 11 154 23 178 6.06e-15 71.2
MS.gene64161.t1 MTR_8g086000 33.121 157 91 4 11 154 66 221 6.49e-15 71.2
MS.gene64161.t1 MTR_3g466400 29.605 152 89 5 16 154 10 156 8.31e-15 71.2
MS.gene64161.t1 MTR_8g071230 31.293 147 89 5 19 156 3 146 9.85e-15 70.9
MS.gene64161.t1 MTR_8g106960 34.000 150 87 4 17 154 115 264 9.89e-15 70.9
MS.gene64161.t1 MTR_8g106960 34.000 150 87 4 17 154 115 264 1.10e-14 70.9
MS.gene64161.t1 MTR_1g086370 30.818 159 98 5 13 159 35 193 1.67e-14 70.1
MS.gene64161.t1 MTR_3g096960 31.737 167 93 4 9 154 7 173 2.36e-14 69.7
MS.gene64161.t1 MTR_1g086370 30.818 159 98 5 13 159 68 226 2.48e-14 69.7
MS.gene64161.t1 MTR_0464s0040 30.201 149 90 6 16 153 8 153 4.52e-14 67.0
MS.gene64161.t1 MTR_4g087620 33.766 154 87 5 15 154 49 201 4.94e-14 68.6
MS.gene64161.t1 MTR_2g105010 29.221 154 97 4 11 154 5 156 5.25e-14 68.6
MS.gene64161.t1 MTR_4g087620 33.766 154 87 5 15 154 49 201 5.43e-14 67.8
MS.gene64161.t1 MTR_3g460980 33.793 145 84 4 15 154 27 164 5.46e-14 68.6
MS.gene64161.t1 MTR_7g089480 39.806 103 54 4 59 154 191 292 9.12e-14 68.2
MS.gene64161.t1 MTR_2g032060 33.553 152 79 8 19 154 3 148 9.52e-14 67.4
MS.gene64161.t1 MTR_3g437510 27.517 149 96 4 16 154 8 154 1.37e-13 66.2
MS.gene64161.t1 MTR_4g128820 32.051 156 85 6 14 154 4 153 1.50e-13 67.4
MS.gene64161.t1 MTR_8g086380 28.743 167 98 6 4 154 7 168 1.85e-13 67.4
MS.gene64161.t1 MTR_3g095620 34.459 148 82 5 20 154 25 170 2.30e-13 66.2
MS.gene64161.t1 MTR_1g084760 29.560 159 100 5 13 159 68 226 2.30e-13 67.0
MS.gene64161.t1 MTR_6g012990 30.137 146 89 5 20 154 19 162 2.69e-13 66.6
MS.gene64161.t1 MTR_4g123940 33.333 147 85 5 19 154 25 169 2.93e-13 66.2
MS.gene64161.t1 MTR_4g123940 33.333 147 85 5 19 154 25 169 2.96e-13 66.6
MS.gene64161.t1 MTR_4g103810 30.065 153 87 4 18 154 106 254 3.32e-13 66.2
MS.gene64161.t1 MTR_6g012990 30.137 146 89 5 20 154 19 162 3.44e-13 66.6
MS.gene64161.t1 MTR_8g040300 29.012 162 91 6 6 154 3 153 4.33e-13 65.5
MS.gene64161.t1 MTR_7g076030 31.915 141 84 5 26 154 40 180 5.68e-13 65.5
MS.gene64161.t1 MTR_4g086660 38.835 103 55 4 59 154 187 288 5.83e-13 65.9
MS.gene64161.t1 MTR_5g017830 31.613 155 87 6 18 154 132 285 7.92e-13 65.5
MS.gene64161.t1 MTR_2g016490 28.105 153 98 5 14 154 34 186 8.31e-13 65.1
MS.gene64161.t1 MTR_4g103810 30.065 153 87 4 18 154 216 364 9.11e-13 65.1
MS.gene64161.t1 MTR_5g010030 31.169 154 91 5 15 154 35 187 1.12e-12 64.7
MS.gene64161.t1 MTR_6g048250 29.452 146 90 5 20 154 19 162 1.27e-12 64.7
MS.gene64161.t1 MTR_3g060390 30.345 145 85 3 15 154 27 160 1.29e-12 64.3
MS.gene64161.t1 MTR_7g076030 29.560 159 100 5 13 159 134 292 1.53e-12 64.7
MS.gene64161.t1 MTR_1g080020 26.974 152 98 4 16 156 5 154 1.54e-12 63.9
MS.gene64161.t1 MTR_6g048250 29.452 146 90 5 20 154 19 162 1.72e-12 64.3
MS.gene64161.t1 MTR_8g079790 38.835 103 55 4 59 154 178 279 1.75e-12 64.3
MS.gene64161.t1 MTR_2g020380 31.915 141 91 4 18 154 2 141 1.90e-12 64.3
MS.gene64161.t1 MTR_6g048250 29.452 146 90 5 20 154 19 162 1.98e-12 64.3
MS.gene64161.t1 MTR_5g075060 28.947 152 90 6 16 154 8 154 2.39e-12 63.9
MS.gene64161.t1 MTR_7g113490 31.469 143 84 3 26 154 74 216 2.53e-12 63.9
MS.gene64161.t1 MTR_1g026075 34.375 128 70 6 35 154 100 221 2.65e-12 62.8
MS.gene64161.t1 MTR_7g116390 25.000 148 97 4 19 154 15 160 4.93e-12 62.8
MS.gene64161.t1 MTR_3g092230 38.835 103 55 4 59 154 188 289 6.43e-12 62.8
MS.gene64161.t1 MTR_3g085650 30.409 171 98 6 1 154 394 560 8.94e-12 62.4
MS.gene64161.t1 MTR_5g092815 30.769 156 91 6 20 160 91 244 9.64e-12 62.0
MS.gene64161.t1 MTR_7g078690 28.758 153 96 5 15 154 32 184 9.67e-12 62.0
MS.gene64161.t1 MTR_3g085650 30.409 171 98 6 1 154 394 560 9.68e-12 62.4
MS.gene64161.t1 MTR_3g085650 30.409 171 98 6 1 154 394 560 1.04e-11 62.4
MS.gene64161.t1 MTR_3g085650 30.409 171 98 6 1 154 394 560 1.30e-11 62.0
MS.gene64161.t1 MTR_4g109090 32.000 100 65 1 58 154 2 101 1.30e-11 62.0
MS.gene64161.t1 MTR_8g024600 53.333 45 21 0 110 154 33 77 1.33e-11 61.6
MS.gene64161.t1 MTR_8g035890 27.338 139 90 4 26 154 22 159 1.55e-11 61.2
MS.gene64161.t1 MTR_1g026190 31.176 170 92 6 13 160 69 235 1.88e-11 61.6
MS.gene64161.t1 MTR_1g105290 30.769 143 85 3 26 154 61 203 1.90e-11 61.2
MS.gene64161.t1 MTR_1g105290 30.769 143 85 3 26 154 61 203 1.96e-11 61.6
MS.gene64161.t1 MTR_8g432510 27.044 159 104 5 13 159 132 290 2.09e-11 61.2
MS.gene64161.t1 MTR_1g105290 30.769 143 85 3 26 154 61 203 2.54e-11 61.2
MS.gene64161.t1 MTR_2g083940 26.582 158 104 5 14 159 28 185 3.46e-11 60.5
MS.gene64161.t1 MTR_7g118020 29.677 155 90 6 18 154 142 295 4.07e-11 60.5
MS.gene64161.t1 MTR_2g083940 26.582 158 104 5 14 159 82 239 4.72e-11 60.1
MS.gene64161.t1 MTR_4g074875 28.477 151 94 4 16 154 16 164 6.18e-11 60.1
MS.gene64161.t1 MTR_4g074875 28.477 151 94 4 16 154 16 164 6.19e-11 60.1
MS.gene64161.t1 MTR_4g005830 36.232 138 79 6 23 154 87 221 7.27e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64161.t1 AT4G28980 63.473 167 50 1 4 159 5 171 1.35e-68 215
MS.gene64161.t1 AT4G28980 63.473 167 50 1 4 159 5 171 1.35e-68 215
MS.gene64161.t1 AT4G28980 63.473 167 50 1 4 159 5 171 1.35e-68 215
MS.gene64161.t1 AT1G73690 36.000 150 84 3 15 154 6 153 4.08e-21 88.6
MS.gene64161.t1 AT1G66750 35.971 139 77 3 26 154 19 155 2.90e-20 85.9
MS.gene64161.t1 AT5G50860 36.424 151 86 4 14 154 108 258 6.03e-20 85.9
MS.gene64161.t1 AT5G50860 36.424 151 86 4 14 154 108 258 8.71e-20 85.5
MS.gene64161.t1 AT4G10010 36.184 152 85 6 14 154 150 300 1.27e-19 85.1
MS.gene64161.t1 AT1G71530 34.437 151 89 3 14 154 141 291 1.28e-19 84.3
MS.gene64161.t1 AT5G44290 34.211 152 88 5 14 154 131 281 1.65e-19 84.7
MS.gene64161.t1 AT1G71530 34.437 151 89 3 14 154 141 291 1.66e-19 84.3
MS.gene64161.t1 AT5G44290 34.211 152 88 5 14 154 131 281 1.93e-19 84.3
MS.gene64161.t1 AT5G44290 34.211 152 88 5 14 154 131 281 1.95e-19 84.3
MS.gene64161.t1 AT5G44290 34.211 152 88 5 14 154 131 281 1.95e-19 84.3
MS.gene64161.t1 AT5G44290 34.211 152 88 5 14 154 131 281 1.95e-19 84.3
MS.gene64161.t1 AT5G44290 34.211 152 88 5 14 154 131 281 1.95e-19 84.3
MS.gene64161.t1 AT5G44290 34.211 152 88 5 14 154 131 281 1.95e-19 84.3
MS.gene64161.t1 AT1G71530 34.437 151 89 3 14 154 141 291 2.01e-19 84.3
MS.gene64161.t1 AT5G45820 33.553 152 83 5 16 154 8 154 2.22e-19 84.0
MS.gene64161.t1 AT5G25110 31.056 161 99 4 4 154 27 185 2.89e-19 84.0
MS.gene64161.t1 AT1G71530 34.437 151 89 3 14 154 141 291 3.56e-19 84.0
MS.gene64161.t1 AT1G33770 36.184 152 85 6 14 154 135 285 1.50e-18 82.0
MS.gene64161.t1 AT5G01810 32.895 152 84 5 16 154 8 154 2.11e-18 80.9
MS.gene64161.t1 AT1G18040 32.000 150 90 3 15 154 7 154 2.22e-18 80.9
MS.gene64161.t1 AT1G53050 34.437 151 89 3 14 154 128 278 2.50e-18 81.3
MS.gene64161.t1 AT1G53050 34.437 151 89 3 14 154 128 278 2.50e-18 81.3
MS.gene64161.t1 AT5G01810 32.895 152 84 5 16 154 8 154 3.03e-18 80.9
MS.gene64161.t1 AT5G01810 32.895 152 84 5 16 154 8 154 3.03e-18 80.9
MS.gene64161.t1 AT4G13020 32.432 148 88 5 16 154 8 152 5.54e-18 80.1
MS.gene64161.t1 AT4G13020 32.432 148 88 5 16 154 8 152 5.55e-18 80.1
MS.gene64161.t1 AT1G59580 36.306 157 86 4 11 154 23 178 8.95e-18 79.3
MS.gene64161.t1 AT1G59580 36.306 157 86 4 11 154 23 178 8.95e-18 79.3
MS.gene64161.t1 AT4G19110 32.414 145 86 5 19 154 3 144 9.92e-18 79.3
MS.gene64161.t1 AT4G19110 32.414 145 86 5 19 154 3 144 1.05e-17 79.3
MS.gene64161.t1 AT5G10930 34.694 147 83 5 19 154 11 155 1.12e-17 79.3
MS.gene64161.t1 AT4G13020 33.103 145 85 5 19 154 3 144 1.25e-17 79.0
MS.gene64161.t1 AT1G54610 32.692 156 95 3 14 159 112 267 1.28e-17 79.3
MS.gene64161.t1 AT1G54610 32.692 156 95 3 14 159 112 267 1.28e-17 79.3
MS.gene64161.t1 AT1G54610 32.692 156 95 3 14 159 112 267 1.28e-17 79.3
MS.gene64161.t1 AT4G13020 33.103 145 85 5 19 154 3 144 1.29e-17 79.0
MS.gene64161.t1 AT4G14580 31.902 163 101 3 2 154 3 165 1.29e-17 79.0
MS.gene64161.t1 AT2G26980 34.014 147 84 6 19 154 13 157 1.32e-17 77.8
MS.gene64161.t1 AT4G13020 33.103 145 85 5 19 154 3 144 1.33e-17 79.0
MS.gene64161.t1 AT4G13020 33.103 145 85 5 19 154 3 144 1.35e-17 79.0
MS.gene64161.t1 AT5G39420 32.692 156 95 3 14 159 99 254 1.51e-17 79.0
MS.gene64161.t1 AT4G36450 35.849 159 84 5 11 154 23 178 2.14e-17 78.2
MS.gene64161.t1 AT2G26980 34.014 147 84 6 19 154 23 167 2.53e-17 78.2
MS.gene64161.t1 AT2G26980 34.014 147 84 6 19 154 13 157 2.56e-17 78.2
MS.gene64161.t1 AT2G26980 34.014 147 84 6 19 154 13 157 2.87e-17 78.2
MS.gene64161.t1 AT2G26980 34.014 147 84 6 19 154 13 157 3.26e-17 77.8
MS.gene64161.t1 AT5G10270 33.333 159 82 6 20 154 26 184 3.77e-17 77.8
MS.gene64161.t1 AT1G30270 32.000 150 83 5 19 154 30 174 4.51e-17 77.8
MS.gene64161.t1 AT1G30270 32.000 150 83 5 19 154 30 174 4.76e-17 77.4
MS.gene64161.t1 AT1G10210 35.669 157 87 4 11 154 23 178 5.08e-17 77.0
MS.gene64161.t1 AT1G10210 35.669 157 87 4 11 154 23 178 5.08e-17 77.0
MS.gene64161.t1 AT1G10210 35.669 157 87 4 11 154 23 178 5.08e-17 77.0
MS.gene64161.t1 AT5G64960 33.333 159 82 6 20 154 26 184 5.85e-17 77.4
MS.gene64161.t1 AT3G18040 35.714 154 87 4 17 158 20 173 6.68e-17 77.0
MS.gene64161.t1 AT3G18040 35.714 154 87 4 17 158 15 168 7.13e-17 77.0
MS.gene64161.t1 AT3G18040 36.000 150 84 4 17 154 129 278 7.15e-17 77.0
MS.gene64161.t1 AT2G38620 33.742 163 81 6 19 154 3 165 7.22e-17 75.5
MS.gene64161.t1 AT2G38620 33.742 163 81 6 19 154 3 165 7.22e-17 75.5
MS.gene64161.t1 AT5G19010 36.242 149 83 4 18 154 23 171 7.67e-17 77.0
MS.gene64161.t1 AT2G42880 35.333 150 85 4 17 154 22 171 8.49e-17 76.6
MS.gene64161.t1 AT2G18170 34.615 156 90 4 11 154 23 178 8.85e-17 76.3
MS.gene64161.t1 AT3G18040 35.714 154 87 4 17 158 129 282 9.03e-17 77.0
MS.gene64161.t1 AT1G03740 33.553 152 89 5 14 154 207 357 1.14e-16 76.6
MS.gene64161.t1 AT1G03740 33.553 152 89 5 14 154 207 357 1.18e-16 76.6
MS.gene64161.t1 AT2G38620 33.742 163 81 6 19 154 3 165 1.36e-16 75.5
MS.gene64161.t1 AT1G18670 31.579 152 92 5 14 154 125 275 1.51e-16 76.3
MS.gene64161.t1 AT3G05050 31.788 151 93 3 14 154 132 282 1.69e-16 76.3
MS.gene64161.t1 AT3G05050 31.788 151 93 3 14 154 132 282 1.69e-16 76.3
MS.gene64161.t1 AT3G05050 31.788 151 93 3 14 154 132 282 1.69e-16 76.3
MS.gene64161.t1 AT1G18670 31.579 152 92 5 14 154 125 275 1.80e-16 75.9
MS.gene64161.t1 AT3G01085 33.333 144 86 2 26 159 121 264 2.01e-16 75.9
MS.gene64161.t1 AT3G01085 33.333 144 86 2 26 159 121 264 2.01e-16 75.9
MS.gene64161.t1 AT3G01085 33.333 144 86 2 26 159 121 264 2.08e-16 75.9
MS.gene64161.t1 AT1G18670 31.579 152 92 5 14 154 125 275 2.10e-16 75.9
MS.gene64161.t1 AT2G25090 35.811 148 81 7 19 154 14 159 2.83e-16 75.5
MS.gene64161.t1 AT2G42880 35.811 148 83 4 19 154 24 171 3.09e-16 75.5
MS.gene64161.t1 AT1G50240 32.867 143 87 4 20 154 6 147 3.31e-16 75.5
MS.gene64161.t1 AT1G50240 32.867 143 87 4 20 154 6 147 3.31e-16 75.5
MS.gene64161.t1 AT5G58380 30.818 159 91 6 10 154 1 154 4.17e-16 74.7
MS.gene64161.t1 AT4G18700 33.557 149 87 5 16 154 22 168 4.24e-16 74.7
MS.gene64161.t1 AT5G45810 32.895 152 84 5 16 154 24 170 4.52e-16 74.7
MS.gene64161.t1 AT1G74330 31.126 151 94 3 14 154 115 265 5.57e-16 74.7
MS.gene64161.t1 AT1G76540 32.680 153 85 5 20 154 14 166 6.00e-16 73.6
MS.gene64161.t1 AT1G74330 31.126 151 94 3 14 154 115 265 6.04e-16 74.3
MS.gene64161.t1 AT5G45430 30.556 144 90 4 19 154 3 144 6.10e-16 74.3
MS.gene64161.t1 AT5G45430 30.556 144 90 4 19 154 3 144 6.11e-16 74.3
MS.gene64161.t1 AT1G20930 33.333 153 84 5 20 154 16 168 6.61e-16 73.6
MS.gene64161.t1 AT3G14720 34.667 150 86 4 17 154 22 171 6.77e-16 74.3
MS.gene64161.t1 AT3G14720 34.667 150 86 4 17 154 22 171 6.77e-16 74.3
MS.gene64161.t1 AT1G74330 31.126 151 94 3 14 154 115 265 7.45e-16 74.3
MS.gene64161.t1 AT5G35410 33.333 147 85 5 19 154 10 154 9.21e-16 73.6
MS.gene64161.t1 AT5G63370 34.868 152 84 5 18 154 161 312 9.89e-16 73.6
MS.gene64161.t1 AT5G35410 33.333 147 85 5 19 154 10 154 1.03e-15 73.6
MS.gene64161.t1 AT1G18150 35.065 154 88 4 17 158 101 254 1.03e-15 73.9
MS.gene64161.t1 AT1G18150 35.065 154 88 4 17 158 101 254 1.03e-15 73.9
MS.gene64161.t1 AT1G18150 35.065 154 88 4 17 158 101 254 1.03e-15 73.9
MS.gene64161.t1 AT4G13020 29.605 152 90 3 19 154 3 153 1.22e-15 73.2
MS.gene64161.t1 AT5G63370 34.868 152 84 5 18 154 161 312 1.23e-15 73.6
MS.gene64161.t1 AT5G63370 34.868 152 84 5 18 154 161 312 1.23e-15 73.6
MS.gene64161.t1 AT4G13020 29.605 152 90 3 19 154 3 153 1.30e-15 73.6
MS.gene64161.t1 AT3G54180 33.333 162 81 7 19 154 3 163 1.61e-15 72.4
MS.gene64161.t1 AT5G63370 34.868 152 84 5 18 154 295 446 1.95e-15 73.2
MS.gene64161.t1 AT5G63370 34.868 152 84 5 18 154 295 446 1.95e-15 73.2
MS.gene64161.t1 AT5G63370 34.868 152 84 5 18 154 295 446 1.95e-15 73.2
MS.gene64161.t1 AT5G63370 34.868 152 84 5 18 154 295 446 1.95e-15 73.2
MS.gene64161.t1 AT5G63370 34.868 152 84 5 18 154 295 446 1.95e-15 73.2
MS.gene64161.t1 AT5G63370 34.868 152 84 5 18 154 295 446 2.08e-15 72.8
MS.gene64161.t1 AT5G63370 34.868 152 84 5 18 154 295 446 2.08e-15 72.8
MS.gene64161.t1 AT5G63610 32.919 161 89 5 13 154 18 178 2.94e-15 72.4
MS.gene64161.t1 AT1G53510 35.135 148 84 4 19 154 24 171 3.22e-15 72.4
MS.gene64161.t1 AT3G45640 33.333 153 89 5 15 154 32 184 3.37e-15 72.0
MS.gene64161.t1 AT4G24400 32.432 148 85 6 19 154 8 152 4.52e-15 71.6
MS.gene64161.t1 AT5G21326 32.484 157 90 7 12 154 2 156 4.78e-15 71.6
MS.gene64161.t1 AT4G24400 32.432 148 85 6 19 154 8 152 4.82e-15 71.6
MS.gene64161.t1 AT5G57630 32.258 155 87 5 19 160 11 160 5.28e-15 71.6
MS.gene64161.t1 AT5G57630 32.258 155 87 5 19 160 11 160 5.86e-15 71.6
MS.gene64161.t1 AT3G23000 29.268 164 102 5 4 154 7 169 5.89e-15 71.6
MS.gene64161.t1 AT3G14720 35.135 148 84 4 19 154 24 171 6.46e-15 71.6
MS.gene64161.t1 AT4G22940 33.803 142 81 5 25 154 108 248 6.88e-15 71.2
MS.gene64161.t1 AT4G22940 33.803 142 81 5 25 154 108 248 7.00e-15 71.2
MS.gene64161.t1 AT3G48750 33.108 148 85 5 19 154 3 148 9.15e-15 70.1
MS.gene64161.t1 AT4G30960 32.192 146 87 5 19 154 23 166 1.20e-14 70.5
MS.gene64161.t1 AT3G29160 30.719 153 87 5 16 154 16 163 1.51e-14 70.1
MS.gene64161.t1 AT2G34180 32.000 150 90 3 19 158 56 203 1.52e-14 70.5
MS.gene64161.t1 AT1G73670 34.667 150 86 4 17 154 87 236 1.66e-14 70.5
MS.gene64161.t1 AT3G29160 30.719 153 87 5 16 154 16 163 2.20e-14 70.1
MS.gene64161.t1 AT3G29160 30.719 153 87 5 16 154 16 163 2.20e-14 70.1
MS.gene64161.t1 AT4G04720 32.258 155 90 5 20 160 80 233 2.69e-14 69.7
MS.gene64161.t1 AT4G04720 32.258 155 90 5 20 160 80 233 2.69e-14 69.7
MS.gene64161.t1 AT2G41140 33.544 158 86 7 15 154 118 274 2.82e-14 69.7
MS.gene64161.t1 AT5G39440 32.051 156 81 5 16 154 15 162 3.46e-14 69.3
MS.gene64161.t1 AT2G30360 29.730 148 90 5 19 154 20 165 5.14e-14 68.9
MS.gene64161.t1 AT2G38490 30.822 146 89 5 19 154 27 170 6.33e-14 68.6
MS.gene64161.t1 AT3G19100 39.806 103 54 4 59 154 194 295 9.38e-14 68.2
MS.gene64161.t1 AT2G43790 33.117 154 88 5 15 154 57 209 1.09e-13 67.8
MS.gene64161.t1 AT4G21940 30.000 160 97 5 15 160 97 255 1.20e-13 67.8
MS.gene64161.t1 AT4G21940 30.000 160 97 5 15 160 97 255 1.27e-13 67.8
MS.gene64161.t1 AT4G21940 30.000 160 97 5 15 160 97 255 1.28e-13 67.8
MS.gene64161.t1 AT5G26751 29.560 159 100 5 13 159 62 220 2.84e-13 66.6
MS.gene64161.t1 AT3G05840 29.560 159 100 5 13 159 66 224 2.89e-13 66.6
MS.gene64161.t1 AT3G05840 29.560 159 100 5 13 159 66 224 2.89e-13 66.6
MS.gene64161.t1 AT1G54960 30.723 166 98 5 3 154 54 216 3.39e-13 66.6
MS.gene64161.t1 AT1G54960 30.723 166 98 5 3 154 54 216 3.39e-13 66.6
MS.gene64161.t1 AT3G56760 33.544 158 86 7 15 154 119 275 3.65e-13 66.6
MS.gene64161.t1 AT5G21222 31.544 149 89 6 19 156 12 158 4.03e-13 66.2
MS.gene64161.t1 AT5G21222 31.544 149 89 6 19 156 12 158 4.03e-13 66.2
MS.gene64161.t1 AT5G21222 31.544 149 89 6 19 156 12 158 4.03e-13 66.2
MS.gene64161.t1 AT5G21222 31.544 149 89 6 19 156 12 158 4.03e-13 66.2
MS.gene64161.t1 AT1G09840 30.822 146 89 5 26 159 89 234 4.48e-13 66.2
MS.gene64161.t1 AT1G09840 30.822 146 89 5 26 159 89 234 4.48e-13 66.2
MS.gene64161.t1 AT1G09840 30.822 146 89 5 26 159 89 234 4.48e-13 66.2
MS.gene64161.t1 AT1G09840 30.822 146 89 5 26 159 89 234 4.48e-13 66.2
MS.gene64161.t1 AT1G09840 30.822 146 89 5 26 159 89 234 4.48e-13 66.2
MS.gene64161.t1 AT1G09840 30.822 146 89 5 26 159 89 234 4.48e-13 66.2
MS.gene64161.t1 AT1G09840 30.822 146 89 5 26 159 89 234 4.48e-13 66.2
MS.gene64161.t1 AT1G09840 30.822 146 89 5 26 159 89 234 4.48e-13 66.2
MS.gene64161.t1 AT1G09840 30.822 146 89 5 26 159 89 234 4.48e-13 66.2
MS.gene64161.t1 AT1G09840 30.822 146 89 5 26 159 89 234 4.48e-13 66.2
MS.gene64161.t1 AT4G11330 32.468 154 89 5 15 154 37 189 5.52e-13 65.9
MS.gene64161.t1 AT1G67580 31.507 146 90 4 19 154 405 550 5.67e-13 65.9
MS.gene64161.t1 AT1G67580 31.507 146 90 4 19 154 405 550 5.67e-13 65.9
MS.gene64161.t1 AT4G19110 38.372 86 48 3 72 154 5 88 5.69e-13 65.9
MS.gene64161.t1 AT1G01140 29.452 146 90 6 20 154 19 162 6.33e-13 65.9
MS.gene64161.t1 AT1G01140 29.452 146 90 6 20 154 19 162 6.51e-13 65.5
MS.gene64161.t1 AT1G01140 29.452 146 90 6 20 154 19 162 6.53e-13 65.5
MS.gene64161.t1 AT4G10010 35.833 120 65 6 46 154 2 120 6.74e-13 65.5
MS.gene64161.t1 AT1G57870 30.822 146 89 5 26 159 88 233 6.74e-13 65.5
MS.gene64161.t1 AT1G76040 30.769 169 96 7 10 160 100 265 6.81e-13 65.5
MS.gene64161.t1 AT1G29230 29.167 144 94 3 19 154 73 216 6.99e-13 65.5
MS.gene64161.t1 AT1G76040 30.769 169 96 7 10 160 100 265 7.90e-13 65.5
MS.gene64161.t1 AT1G57870 30.822 146 89 5 26 159 88 233 8.72e-13 65.1
MS.gene64161.t1 AT1G57870 30.822 146 89 5 26 159 88 233 8.72e-13 65.1
MS.gene64161.t1 AT1G57870 30.822 146 89 5 26 159 88 233 8.72e-13 65.1
MS.gene64161.t1 AT4G01370 32.468 154 89 6 15 154 37 189 1.11e-12 64.7
MS.gene64161.t1 AT3G01090 30.000 150 92 5 16 154 15 162 1.52e-12 64.7
MS.gene64161.t1 AT3G01090 30.000 150 92 5 16 154 15 162 1.52e-12 64.7
MS.gene64161.t1 AT3G01090 30.000 150 92 5 16 154 38 185 1.62e-12 64.7
MS.gene64161.t1 AT1G09600 31.788 151 93 3 14 154 157 307 1.68e-12 64.7
MS.gene64161.t1 AT4G04710 30.114 176 100 7 6 160 20 193 2.02e-12 64.3
MS.gene64161.t1 AT4G04710 30.114 176 100 7 6 160 20 193 2.17e-12 64.3
MS.gene64161.t1 AT4G04710 30.114 176 100 7 6 160 20 193 2.17e-12 64.3
MS.gene64161.t1 AT5G14640 28.302 159 102 5 13 159 67 225 4.07e-12 63.2
MS.gene64161.t1 AT5G14640 28.302 159 102 5 13 159 67 225 4.07e-12 63.2
MS.gene64161.t1 AT1G07880 30.065 153 94 5 15 154 27 179 5.46e-12 62.8
MS.gene64161.t1 AT4G04700 30.636 173 97 7 9 160 15 185 5.75e-12 62.8
MS.gene64161.t1 AT1G07880 30.065 153 94 5 15 154 27 179 6.03e-12 62.0
MS.gene64161.t1 AT2G30980 27.848 158 102 5 14 159 66 223 6.54e-12 62.8
MS.gene64161.t1 AT4G38230 31.138 167 94 6 11 160 45 207 6.80e-12 62.8
MS.gene64161.t1 AT4G38230 31.138 167 94 6 11 160 15 177 6.96e-12 62.8
MS.gene64161.t1 AT4G38230 31.138 167 94 6 11 160 15 177 6.96e-12 62.8
MS.gene64161.t1 AT1G06390 27.848 158 102 5 14 159 64 221 7.30e-12 62.8
MS.gene64161.t1 AT1G06390 27.848 158 102 5 14 159 64 221 7.30e-12 62.8
MS.gene64161.t1 AT5G01820 32.237 152 91 5 13 154 15 164 9.13e-12 62.4
MS.gene64161.t1 AT1G57700 31.126 151 94 3 14 154 140 290 1.03e-11 62.4
MS.gene64161.t1 AT3G53930 34.667 150 79 7 20 154 20 165 1.13e-11 62.4
MS.gene64161.t1 AT3G53930 34.667 150 79 7 20 154 20 165 1.18e-11 62.0
MS.gene64161.t1 AT4G04695 35.484 124 67 5 48 160 64 185 1.78e-11 61.6
MS.gene64161.t1 AT5G07070 30.189 159 92 6 10 154 1 154 1.99e-11 61.2
MS.gene64161.t1 AT4G16970 30.159 126 86 1 20 143 401 526 2.50e-11 61.2
MS.gene64161.t1 AT1G49580 36.893 103 57 4 59 154 200 301 2.62e-11 61.2
MS.gene64161.t1 AT1G09000 28.916 166 102 4 3 154 54 217 2.63e-11 61.2
MS.gene64161.t1 AT4G00720 27.044 159 104 5 13 159 131 289 2.78e-11 60.8
MS.gene64161.t1 AT2G37840 34.459 148 82 7 20 154 12 157 2.95e-11 60.8
MS.gene64161.t1 AT1G61950 29.560 159 94 6 13 154 89 246 3.06e-11 60.8
MS.gene64161.t1 AT1G09000 28.916 166 102 4 3 154 54 217 3.80e-11 60.8
MS.gene64161.t1 AT1G30270 51.111 45 22 0 110 154 33 77 4.52e-11 60.5
MS.gene64161.t1 AT1G50700 31.410 156 90 6 20 160 73 226 5.32e-11 60.1
MS.gene64161.t1 AT1G50700 31.410 156 90 6 20 160 73 226 5.52e-11 60.1
MS.gene64161.t1 AT1G50700 31.410 156 90 6 20 160 73 226 6.14e-11 60.1
MS.gene64161.t1 AT2G17890 30.818 159 91 5 19 160 107 263 7.66e-11 59.7
MS.gene64161.t1 AT3G49370 34.951 103 59 4 59 154 192 293 9.63e-11 59.3

Find 61 sgRNAs with CRISPR-Local

Find 66 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTCTTGGTTTCGGAAAA+TGG 0.152157 6.2:-87396228 MS.gene64161:CDS
GAGTATTTGGTTGTGATTTC+GGG 0.212658 6.2:+87396603 None:intergenic
CACCGCTTTACGCATTCTTC+GGG 0.264886 6.2:-87396460 MS.gene64161:CDS
TGGTTGATGCAGATTGTTAA+TGG 0.273011 6.2:-87396303 MS.gene64161:CDS
GCCGGAGAATTTCTTGGTTT+CGG 0.287094 6.2:-87396235 MS.gene64161:CDS
GGAGTATTTGGTTGTGATTT+CGG 0.300574 6.2:+87396602 None:intergenic
GGTTGATGCAGATTGTTAAT+GGG 0.323354 6.2:-87396302 MS.gene64161:CDS
GTGGGTGAGGATGGAGTATT+TGG 0.334245 6.2:+87396590 None:intergenic
TTTGAAGCCGGAGAATTTCT+TGG 0.347755 6.2:-87396241 MS.gene64161:CDS
GGAGTTTCTGAGGAGTGATC+TGG 0.352473 6.2:-87396370 MS.gene64161:CDS
TGGATGCTCCAACTCTTTGT+TGG 0.367306 6.2:+87396633 None:intergenic
ATTTCTTGGTTTCGGAAAAT+GGG 0.371775 6.2:-87396227 MS.gene64161:CDS
TCACCGCTTTACGCATTCTT+CGG 0.373878 6.2:-87396461 MS.gene64161:CDS
ATGGGGTTTATGATTGTCAT+AGG 0.377152 6.2:-87396284 MS.gene64161:CDS
TTGTGATTTCGGGTCGGGTT+TGG 0.380322 6.2:+87396613 None:intergenic
ATGCTCCAACTCTTTGTTGG+AGG 0.429536 6.2:+87396636 None:intergenic
TTTGGTTGTGATTTCGGGTC+GGG 0.435599 6.2:+87396608 None:intergenic
TTTATGATTGTCATAGGAAT+GGG 0.437642 6.2:-87396278 MS.gene64161:CDS
TTTGGTGGTGGTGAAGTGAA+AGG 0.438175 6.2:-87396327 MS.gene64161:CDS
TCCGAAACCAAGAAATTCTC+CGG 0.442699 6.2:+87396234 None:intergenic
TTGGTGGTGGTGAAGTGAAA+GGG 0.449706 6.2:-87396326 MS.gene64161:CDS
GTTTATGATTGTCATAGGAA+TGG 0.466642 6.2:-87396279 MS.gene64161:CDS
CTGGGTGCTGTGATCAGAGA+TGG 0.476288 6.2:-87396351 MS.gene64161:CDS
ATCAGAGATGGGTTTGGTGG+TGG 0.478178 6.2:-87396339 MS.gene64161:CDS
CGGGTGTTCCGTCGGAGATA+CGG 0.485604 6.2:+87396529 None:intergenic
AGTAGGTGCCGGAGCCGATG+TGG 0.498965 6.2:+87396571 None:intergenic
GAGTTTCTGAGGAGTGATCT+GGG 0.499395 6.2:-87396369 MS.gene64161:CDS
ATTTGGTTGTGATTTCGGGT+CGG 0.506980 6.2:+87396607 None:intergenic
TGGATTTCTTTCAACGCGAC+GGG 0.510732 6.2:+87396510 None:intergenic
TGATTTCACGTGATGCTGAT+TGG 0.514067 6.2:+87396481 None:intergenic
GCTGTGATCAGAGATGGGTT+TGG 0.517790 6.2:-87396345 MS.gene64161:CDS
GGAGCCGATGTGGGTGAGGA+TGG 0.532075 6.2:+87396581 None:intergenic
ATCCTCACCCACATCGGCTC+CGG 0.532249 6.2:-87396579 MS.gene64161:CDS
GTTGATGCAGATTGTTAATG+GGG 0.532595 6.2:-87396301 MS.gene64161:CDS
TGCCGGAGCCGATGTGGGTG+AGG 0.533356 6.2:+87396577 None:intergenic
GTGGTGGTGAAGTGAAAGGG+TGG 0.546766 6.2:-87396323 MS.gene64161:CDS
TGGATCCTCCAACAAAGAGT+TGG 0.549349 6.2:-87396641 MS.gene64161:CDS
CGAATTCTTCTGGAGGGAGG+AGG 0.550178 6.2:-87396412 MS.gene64161:CDS
GTGGATTTCTTTCAACGCGA+CGG 0.570456 6.2:+87396509 None:intergenic
GTAGACGTCGGAGTAGGTGC+CGG 0.570945 6.2:+87396560 None:intergenic
TTTCTTGGTTTCGGAAAATG+GGG 0.574931 6.2:-87396226 MS.gene64161:CDS
CAACGCGACGGGTGTTCCGT+CGG 0.576143 6.2:+87396521 None:intergenic
TGTTCATAGAGATTTGAAGC+CGG 0.577519 6.2:-87396253 MS.gene64161:CDS
TGATCGTGTTGGAGTTTCTG+AGG 0.579359 6.2:-87396380 MS.gene64161:CDS
GTGATCAGAGATGGGTTTGG+TGG 0.579475 6.2:-87396342 MS.gene64161:CDS
GTAGGTGCCGGAGCCGATGT+GGG 0.589364 6.2:+87396572 None:intergenic
TACTCCATCCTCACCCACAT+CGG 0.591271 6.2:-87396585 MS.gene64161:CDS
GGAAGATGCAGTGATCGTGT+TGG 0.592089 6.2:-87396391 MS.gene64161:CDS
TCTTCGGGGCTCCGAAAACG+TGG 0.595403 6.2:-87396445 MS.gene64161:CDS
TGGGTGCTGTGATCAGAGAT+GGG 0.595483 6.2:-87396350 MS.gene64161:CDS
GCCGCTGTAGACGTCGGAGT+AGG 0.606816 6.2:+87396554 None:intergenic
GATGCACGAATTCTTCTGGA+GGG 0.628734 6.2:-87396418 MS.gene64161:CDS
TGATGCACGAATTCTTCTGG+AGG 0.629406 6.2:-87396419 MS.gene64161:CDS
AGCGGCCGCCGTATCTCCGA+CGG 0.629656 6.2:-87396537 MS.gene64161:CDS
ACCGCTTTACGCATTCTTCG+GGG 0.632838 6.2:-87396459 MS.gene64161:CDS
GTGATGCTGATTGGTGATCG+TGG 0.635850 6.2:+87396490 None:intergenic
GCCCCGAAGAATGCGTAAAG+CGG 0.647385 6.2:+87396458 None:intergenic
GCACGAATTCTTCTGGAGGG+AGG 0.656237 6.2:-87396415 MS.gene64161:CDS
ACCTACTCCGACGTCTACAG+CGG 0.673944 6.2:-87396555 MS.gene64161:CDS
ACGGCGGCCGCTGTAGACGT+CGG 0.694858 6.2:+87396548 None:intergenic
GTGTTCCGTCGGAGATACGG+CGG 0.714791 6.2:+87396532 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TTTATGATTGTCATAGGAAT+GGG - chr6.2:87396543-87396562 MS.gene64161:CDS 25.0%
!!! GTTTTGAAAATTGCTGATTT+TGG - chr6.2:87396617-87396636 MS.gene64161:CDS 25.0%
AATTTCTTGGTTTCGGAAAA+TGG - chr6.2:87396593-87396612 MS.gene64161:CDS 30.0%
ATTTCTTGGTTTCGGAAAAT+GGG - chr6.2:87396594-87396613 MS.gene64161:CDS 30.0%
GTTTATGATTGTCATAGGAA+TGG - chr6.2:87396542-87396561 MS.gene64161:CDS 30.0%
ATGGGGTTTATGATTGTCAT+AGG - chr6.2:87396537-87396556 MS.gene64161:CDS 35.0%
GAGTATTTGGTTGTGATTTC+GGG + chr6.2:87396221-87396240 None:intergenic 35.0%
GTTGATGCAGATTGTTAATG+GGG - chr6.2:87396520-87396539 MS.gene64161:CDS 35.0%
TTTCTTGGTTTCGGAAAATG+GGG - chr6.2:87396595-87396614 MS.gene64161:CDS 35.0%
! GGAGTATTTGGTTGTGATTT+CGG + chr6.2:87396222-87396241 None:intergenic 35.0%
! GGTTGATGCAGATTGTTAAT+GGG - chr6.2:87396519-87396538 MS.gene64161:CDS 35.0%
! TGGTTGATGCAGATTGTTAA+TGG - chr6.2:87396518-87396537 MS.gene64161:CDS 35.0%
! TGTTCATAGAGATTTGAAGC+CGG - chr6.2:87396568-87396587 MS.gene64161:CDS 35.0%
! TTTTGATGCACGAATTCTTC+TGG - chr6.2:87396399-87396418 MS.gene64161:CDS 35.0%
!!! GAAAATTGCTGATTTTGGAC+AGG - chr6.2:87396622-87396641 MS.gene64161:CDS 35.0%
TCCGAAACCAAGAAATTCTC+CGG + chr6.2:87396590-87396609 None:intergenic 40.0%
TGATTTCACGTGATGCTGAT+TGG + chr6.2:87396343-87396362 None:intergenic 40.0%
! ATTTGGTTGTGATTTCGGGT+CGG + chr6.2:87396217-87396236 None:intergenic 40.0%
! GTGCATCAAAACCACGTTTT+CGG + chr6.2:87396390-87396409 None:intergenic 40.0%
! TTTGAAGCCGGAGAATTTCT+TGG - chr6.2:87396580-87396599 MS.gene64161:CDS 40.0%
!!! TGCTGATTTTGGACAGGTTT+TGG - chr6.2:87396628-87396647 MS.gene64161:CDS 40.0%
ATGCTCCAACTCTTTGTTGG+AGG + chr6.2:87396188-87396207 None:intergenic 45.0%
GATGCACGAATTCTTCTGGA+GGG - chr6.2:87396403-87396422 MS.gene64161:CDS 45.0%
GCCGGAGAATTTCTTGGTTT+CGG - chr6.2:87396586-87396605 MS.gene64161:CDS 45.0%
GTGGATTTCTTTCAACGCGA+CGG + chr6.2:87396315-87396334 None:intergenic 45.0%
TCACCGCTTTACGCATTCTT+CGG - chr6.2:87396360-87396379 MS.gene64161:CDS 45.0%
TGATCGTGTTGGAGTTTCTG+AGG - chr6.2:87396441-87396460 MS.gene64161:CDS 45.0%
TGATGCACGAATTCTTCTGG+AGG - chr6.2:87396402-87396421 MS.gene64161:CDS 45.0%
TGGATCCTCCAACAAAGAGT+TGG - chr6.2:87396180-87396199 MS.gene64161:CDS 45.0%
TGGATGCTCCAACTCTTTGT+TGG + chr6.2:87396191-87396210 None:intergenic 45.0%
TGGATTTCTTTCAACGCGAC+GGG + chr6.2:87396314-87396333 None:intergenic 45.0%
! GAGTTTCTGAGGAGTGATCT+GGG - chr6.2:87396452-87396471 MS.gene64161:CDS 45.0%
! TTTGGTTGTGATTTCGGGTC+GGG + chr6.2:87396216-87396235 None:intergenic 45.0%
!! TTGGTGGTGGTGAAGTGAAA+GGG - chr6.2:87396495-87396514 MS.gene64161:CDS 45.0%
!! TTTGGTGGTGGTGAAGTGAA+AGG - chr6.2:87396494-87396513 MS.gene64161:CDS 45.0%
ACCGCTTTACGCATTCTTCG+GGG - chr6.2:87396362-87396381 MS.gene64161:CDS 50.0%
CACCGCTTTACGCATTCTTC+GGG - chr6.2:87396361-87396380 MS.gene64161:CDS 50.0%
GGAAGATGCAGTGATCGTGT+TGG - chr6.2:87396430-87396449 MS.gene64161:CDS 50.0%
TACTCCATCCTCACCCACAT+CGG - chr6.2:87396236-87396255 MS.gene64161:CDS 50.0%
! GCTGTGATCAGAGATGGGTT+TGG - chr6.2:87396476-87396495 MS.gene64161:CDS 50.0%
! GGAGTTTCTGAGGAGTGATC+TGG - chr6.2:87396451-87396470 MS.gene64161:CDS 50.0%
! GTGATCAGAGATGGGTTTGG+TGG - chr6.2:87396479-87396498 MS.gene64161:CDS 50.0%
! GTGATGCTGATTGGTGATCG+TGG + chr6.2:87396334-87396353 None:intergenic 50.0%
! GTGGGTGAGGATGGAGTATT+TGG + chr6.2:87396234-87396253 None:intergenic 50.0%
! TGGGTGCTGTGATCAGAGAT+GGG - chr6.2:87396471-87396490 MS.gene64161:CDS 50.0%
! TTGTGATTTCGGGTCGGGTT+TGG + chr6.2:87396211-87396230 None:intergenic 50.0%
!! ATCAGAGATGGGTTTGGTGG+TGG - chr6.2:87396482-87396501 MS.gene64161:CDS 50.0%
ACCTACTCCGACGTCTACAG+CGG - chr6.2:87396266-87396285 MS.gene64161:CDS 55.0%
GCCCCGAAGAATGCGTAAAG+CGG + chr6.2:87396366-87396385 None:intergenic 55.0%
! CGAATTCTTCTGGAGGGAGG+AGG - chr6.2:87396409-87396428 MS.gene64161:CDS 55.0%
! CTGGGTGCTGTGATCAGAGA+TGG - chr6.2:87396470-87396489 MS.gene64161:CDS 55.0%
! GCACGAATTCTTCTGGAGGG+AGG - chr6.2:87396406-87396425 MS.gene64161:CDS 55.0%
! GTGGTGGTGAAGTGAAAGGG+TGG - chr6.2:87396498-87396517 MS.gene64161:CDS 55.0%
CGGGTGTTCCGTCGGAGATA+CGG + chr6.2:87396295-87396314 None:intergenic 60.0%
GTAGACGTCGGAGTAGGTGC+CGG + chr6.2:87396264-87396283 None:intergenic 60.0%
GTGTTCCGTCGGAGATACGG+CGG + chr6.2:87396292-87396311 None:intergenic 60.0%
TCTTCGGGGCTCCGAAAACG+TGG - chr6.2:87396376-87396395 MS.gene64161:CDS 60.0%
!! ATCCTCACCCACATCGGCTC+CGG - chr6.2:87396242-87396261 MS.gene64161:CDS 60.0%
CAACGCGACGGGTGTTCCGT+CGG + chr6.2:87396303-87396322 None:intergenic 65.0%
GCCGCTGTAGACGTCGGAGT+AGG + chr6.2:87396270-87396289 None:intergenic 65.0%
GGAGCCGATGTGGGTGAGGA+TGG + chr6.2:87396243-87396262 None:intergenic 65.0%
!! AGTAGGTGCCGGAGCCGATG+TGG + chr6.2:87396253-87396272 None:intergenic 65.0%
!! GTAGGTGCCGGAGCCGATGT+GGG + chr6.2:87396252-87396271 None:intergenic 65.0%
ACGGCGGCCGCTGTAGACGT+CGG + chr6.2:87396276-87396295 None:intergenic 70.0%
AGCGGCCGCCGTATCTCCGA+CGG - chr6.2:87396284-87396303 MS.gene64161:CDS 70.0%
TGCCGGAGCCGATGTGGGTG+AGG + chr6.2:87396247-87396266 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 87396179 87396664 87396179 ID=MS.gene64161
chr6.2 mRNA 87396179 87396664 87396179 ID=MS.gene64161.t1;Parent=MS.gene64161
chr6.2 exon 87396179 87396664 87396179 ID=MS.gene64161.t1.exon1;Parent=MS.gene64161.t1
chr6.2 CDS 87396179 87396664 87396179 ID=cds.MS.gene64161.t1;Parent=MS.gene64161.t1
Gene Sequence

>MS.gene64161

ATGGATCCTCCAACAAAGAGTTGGAGCATCCAAACCCGACCCGAAATCACAACCAAATACTCCATCCTCACCCACATCGGCTCCGGCACCTACTCCGACGTCTACAGCGGCCGCCGTATCTCCGACGGAACACCCGTCGCGTTGAAAGAAATCCACGATCACCAATCAGCATCACGTGAAATCACCGCTTTACGCATTCTTCGGGGCTCCGAAAACGTGGTTTTGATGCACGAATTCTTCTGGAGGGAGGAGGAAGATGCAGTGATCGTGTTGGAGTTTCTGAGGAGTGATCTGGGTGCTGTGATCAGAGATGGGTTTGGTGGTGGTGAAGTGAAAGGGTGGTTGATGCAGATTGTTAATGGGGTTTATGATTGTCATAGGAATGGGATTGTTCATAGAGATTTGAAGCCGGAGAATTTCTTGGTTTCGGAAAATGGGGTTTTGAAAATTGCTGATTTTGGACAGGTTTTGGTTATAAAGTTTTGA
Protein sequence

>MS.gene64161.t1

MDPPTKSWSIQTRPEITTKYSILTHIGSGTYSDVYSGRRISDGTPVALKEIHDHQSASREITALRILRGSENVVLMHEFFWREEEDAVIVLEFLRSDLGAVIRDGFGGGEVKGWLMQIVNGVYDCHRNGIVHRDLKPENFLVSENGVLKIADFGQVLVIKF