Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64380.t1 | RHN74120.1 | 98.2 | 503 | 7 | 1 | 1 | 503 | 1 | 501 | 1.40E-272 | 948.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64380.t1 | Q8S4W7 | 46.0 | 570 | 220 | 10 | 8 | 498 | 26 | 586 | 4.7e-128 | 459.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64380.t1 | A0A396J7P5 | 98.2 | 503 | 7 | 1 | 1 | 503 | 1 | 501 | 1.0e-272 | 948.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene64380.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64380.t1 | MTR_3g065980 | 46.939 | 539 | 210 | 12 | 16 | 489 | 13 | 540 | 5.72e-159 | 462 |
MS.gene64380.t1 | MTR_7g027190 | 42.105 | 399 | 190 | 9 | 117 | 489 | 290 | 673 | 6.60e-92 | 294 |
MS.gene64380.t1 | MTR_4g133660 | 33.562 | 438 | 267 | 11 | 67 | 488 | 113 | 542 | 1.26e-68 | 229 |
MS.gene64380.t1 | MTR_2g082090 | 35.885 | 418 | 236 | 11 | 95 | 488 | 169 | 578 | 1.28e-67 | 228 |
MS.gene64380.t1 | MTR_8g442410 | 35.661 | 401 | 214 | 13 | 119 | 493 | 147 | 529 | 2.63e-66 | 223 |
MS.gene64380.t1 | MTR_5g094450 | 36.272 | 397 | 216 | 13 | 116 | 489 | 150 | 532 | 7.68e-66 | 222 |
MS.gene64380.t1 | MTR_4g102790 | 34.793 | 411 | 238 | 9 | 100 | 491 | 265 | 664 | 1.05e-65 | 225 |
MS.gene64380.t1 | MTR_3g056110 | 38.287 | 397 | 204 | 14 | 116 | 489 | 164 | 542 | 1.93e-65 | 221 |
MS.gene64380.t1 | MTR_5g097480 | 36.340 | 388 | 216 | 12 | 120 | 489 | 170 | 544 | 2.31e-64 | 218 |
MS.gene64380.t1 | MTR_1g029420 | 37.067 | 375 | 219 | 10 | 126 | 489 | 224 | 592 | 4.76e-64 | 218 |
MS.gene64380.t1 | MTR_7g074650 | 37.366 | 372 | 199 | 11 | 131 | 489 | 442 | 792 | 1.48e-62 | 218 |
MS.gene64380.t1 | MTR_3g089055 | 32.700 | 474 | 274 | 16 | 38 | 489 | 120 | 570 | 3.35e-62 | 213 |
MS.gene64380.t1 | MTR_3g089055 | 32.700 | 474 | 274 | 16 | 38 | 489 | 115 | 565 | 3.50e-62 | 213 |
MS.gene64380.t1 | MTR_4g104020 | 34.568 | 405 | 216 | 14 | 117 | 490 | 135 | 521 | 1.72e-60 | 207 |
MS.gene64380.t1 | MTR_2g026250 | 30.228 | 483 | 306 | 15 | 25 | 490 | 129 | 597 | 2.80e-57 | 200 |
MS.gene64380.t1 | MTR_3g022830 | 30.952 | 420 | 223 | 9 | 128 | 489 | 26 | 436 | 5.85e-56 | 193 |
MS.gene64380.t1 | MTR_1g096030 | 31.731 | 416 | 230 | 16 | 111 | 491 | 65 | 461 | 3.01e-54 | 189 |
MS.gene64380.t1 | MTR_2g097410 | 32.199 | 382 | 239 | 8 | 121 | 488 | 365 | 740 | 4.65e-52 | 188 |
MS.gene64380.t1 | MTR_4g076020 | 34.211 | 380 | 201 | 13 | 131 | 494 | 88 | 434 | 1.46e-51 | 181 |
MS.gene64380.t1 | MTR_4g064160 | 33.245 | 379 | 235 | 8 | 122 | 488 | 311 | 683 | 1.19e-50 | 184 |
MS.gene64380.t1 | MTR_4g064180 | 29.504 | 383 | 252 | 5 | 118 | 486 | 245 | 623 | 1.59e-49 | 180 |
MS.gene64380.t1 | MTR_4g076140 | 29.705 | 441 | 233 | 13 | 118 | 490 | 39 | 470 | 1.67e-49 | 177 |
MS.gene64380.t1 | MTR_4g064150 | 30.412 | 388 | 248 | 7 | 117 | 488 | 351 | 732 | 2.99e-48 | 177 |
MS.gene64380.t1 | MTR_3g072710 | 33.333 | 399 | 230 | 12 | 117 | 488 | 110 | 499 | 3.23e-48 | 174 |
MS.gene64380.t1 | MTR_4g064120 | 29.243 | 383 | 253 | 5 | 118 | 486 | 245 | 623 | 5.55e-48 | 176 |
MS.gene64380.t1 | MTR_2g097310 | 32.199 | 382 | 239 | 8 | 119 | 488 | 264 | 637 | 5.77e-48 | 176 |
MS.gene64380.t1 | MTR_1g069725 | 29.730 | 444 | 263 | 14 | 66 | 488 | 47 | 462 | 6.03e-48 | 172 |
MS.gene64380.t1 | MTR_5g009080 | 29.372 | 446 | 229 | 12 | 118 | 490 | 47 | 479 | 1.95e-47 | 171 |
MS.gene64380.t1 | MTR_4g077760 | 31.343 | 469 | 266 | 18 | 58 | 489 | 106 | 555 | 1.80e-46 | 170 |
MS.gene64380.t1 | MTR_7g062120 | 30.628 | 382 | 243 | 8 | 122 | 489 | 367 | 740 | 2.55e-45 | 169 |
MS.gene64380.t1 | MTR_2g034250 | 29.545 | 396 | 250 | 8 | 117 | 491 | 200 | 587 | 3.98e-45 | 167 |
MS.gene64380.t1 | MTR_5g058860 | 32.518 | 409 | 241 | 14 | 109 | 491 | 100 | 499 | 5.54e-45 | 165 |
MS.gene64380.t1 | MTR_2g097467 | 30.612 | 392 | 255 | 11 | 107 | 488 | 269 | 653 | 9.49e-45 | 167 |
MS.gene64380.t1 | MTR_2g097350 | 31.070 | 383 | 242 | 10 | 119 | 488 | 266 | 639 | 1.68e-44 | 166 |
MS.gene64380.t1 | MTR_2g097390 | 29.362 | 470 | 298 | 13 | 33 | 488 | 191 | 640 | 1.81e-44 | 166 |
MS.gene64380.t1 | MTR_4g064200 | 31.854 | 383 | 237 | 12 | 120 | 488 | 277 | 649 | 2.71e-44 | 166 |
MS.gene64380.t1 | MTR_2g097380 | 33.433 | 335 | 190 | 9 | 159 | 488 | 254 | 560 | 9.26e-44 | 163 |
MS.gene64380.t1 | MTR_2g034260 | 28.101 | 395 | 256 | 8 | 117 | 491 | 200 | 586 | 9.28e-44 | 163 |
MS.gene64380.t1 | MTR_2g097473 | 29.723 | 397 | 255 | 11 | 104 | 488 | 269 | 653 | 1.22e-42 | 161 |
MS.gene64380.t1 | MTR_2g097463 | 30.179 | 391 | 252 | 11 | 110 | 488 | 273 | 654 | 1.92e-42 | 160 |
MS.gene64380.t1 | MTR_2g034280 | 27.157 | 394 | 259 | 9 | 117 | 491 | 193 | 577 | 2.58e-40 | 153 |
MS.gene64380.t1 | MTR_8g093070 | 31.088 | 386 | 219 | 15 | 124 | 488 | 136 | 495 | 2.62e-40 | 152 |
MS.gene64380.t1 | MTR_0092s0100 | 31.842 | 380 | 225 | 9 | 124 | 489 | 372 | 731 | 4.97e-40 | 154 |
MS.gene64380.t1 | MTR_0092s0100 | 31.842 | 380 | 225 | 9 | 124 | 489 | 369 | 728 | 5.23e-40 | 154 |
MS.gene64380.t1 | MTR_5g015490 | 29.086 | 361 | 235 | 6 | 150 | 489 | 130 | 490 | 6.24e-38 | 145 |
MS.gene64380.t1 | MTR_4g097080 | 27.671 | 365 | 232 | 11 | 147 | 489 | 149 | 503 | 1.30e-37 | 144 |
MS.gene64380.t1 | MTR_7g109580 | 27.877 | 391 | 249 | 11 | 117 | 489 | 179 | 554 | 1.14e-34 | 137 |
MS.gene64380.t1 | MTR_6g047750 | 27.720 | 386 | 240 | 9 | 126 | 489 | 294 | 662 | 1.28e-34 | 138 |
MS.gene64380.t1 | MTR_1g086970 | 27.136 | 398 | 250 | 11 | 117 | 489 | 96 | 478 | 2.90e-33 | 132 |
MS.gene64380.t1 | MTR_4g026485 | 27.068 | 399 | 256 | 13 | 108 | 490 | 246 | 625 | 2.63e-32 | 130 |
MS.gene64380.t1 | MTR_7g057230 | 32.646 | 291 | 179 | 9 | 207 | 488 | 374 | 656 | 2.70e-32 | 131 |
MS.gene64380.t1 | MTR_5g015950 | 26.253 | 419 | 246 | 13 | 126 | 488 | 34 | 445 | 2.68e-31 | 126 |
MS.gene64380.t1 | MTR_3g053270 | 26.253 | 419 | 246 | 13 | 126 | 488 | 34 | 445 | 2.68e-31 | 126 |
MS.gene64380.t1 | MTR_4g095500 | 25.647 | 425 | 239 | 14 | 126 | 488 | 58 | 467 | 8.10e-29 | 119 |
MS.gene64380.t1 | MTR_2g099110 | 25.852 | 352 | 224 | 8 | 165 | 489 | 110 | 451 | 7.74e-28 | 116 |
MS.gene64380.t1 | MTR_8g077940 | 26.842 | 380 | 247 | 9 | 124 | 489 | 179 | 541 | 1.74e-26 | 113 |
MS.gene64380.t1 | MTR_2g089100 | 23.367 | 398 | 262 | 11 | 127 | 488 | 52 | 442 | 3.07e-25 | 108 |
MS.gene64380.t1 | MTR_8g020840 | 27.157 | 313 | 192 | 9 | 200 | 489 | 249 | 548 | 3.98e-22 | 100 |
MS.gene64380.t1 | MTR_3g022005 | 34.211 | 114 | 63 | 2 | 387 | 489 | 13 | 125 | 2.06e-12 | 64.7 |
MS.gene64380.t1 | MTR_3g022580 | 35.714 | 112 | 66 | 3 | 382 | 489 | 74 | 183 | 1.16e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64380.t1 | AT1G14920 | 48.155 | 515 | 214 | 11 | 16 | 489 | 27 | 529 | 2.50e-160 | 466 |
MS.gene64380.t1 | AT3G03450 | 47.554 | 511 | 217 | 12 | 19 | 489 | 46 | 545 | 7.28e-151 | 442 |
MS.gene64380.t1 | AT1G66350 | 49.495 | 495 | 210 | 16 | 16 | 489 | 31 | 506 | 4.07e-148 | 434 |
MS.gene64380.t1 | AT5G17490 | 46.169 | 496 | 235 | 11 | 15 | 489 | 32 | 516 | 1.50e-143 | 422 |
MS.gene64380.t1 | AT2G01570 | 54.922 | 386 | 162 | 6 | 108 | 489 | 204 | 581 | 1.46e-142 | 422 |
MS.gene64380.t1 | AT2G01570 | 53.846 | 65 | 29 | 1 | 17 | 80 | 44 | 108 | 4.07e-13 | 72.0 |
MS.gene64380.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 114 | 489 | 109 | 490 | 2.77e-66 | 222 |
MS.gene64380.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 114 | 489 | 109 | 490 | 2.77e-66 | 222 |
MS.gene64380.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 114 | 489 | 109 | 490 | 2.77e-66 | 222 |
MS.gene64380.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 114 | 489 | 109 | 490 | 2.77e-66 | 222 |
MS.gene64380.t1 | AT2G04890 | 36.364 | 385 | 221 | 8 | 116 | 489 | 42 | 413 | 4.11e-66 | 219 |
MS.gene64380.t1 | AT1G50600 | 35.750 | 400 | 236 | 8 | 103 | 489 | 135 | 526 | 4.73e-66 | 222 |
MS.gene64380.t1 | AT1G50600 | 35.750 | 400 | 236 | 8 | 103 | 489 | 206 | 597 | 1.35e-65 | 223 |
MS.gene64380.t1 | AT1G50600 | 35.750 | 400 | 236 | 8 | 103 | 489 | 210 | 601 | 1.53e-65 | 223 |
MS.gene64380.t1 | AT5G41920 | 35.696 | 395 | 219 | 13 | 115 | 493 | 29 | 404 | 1.21e-62 | 210 |
MS.gene64380.t1 | AT1G21450 | 34.949 | 392 | 239 | 8 | 109 | 489 | 207 | 593 | 3.77e-60 | 208 |
MS.gene64380.t1 | AT3G54220 | 35.310 | 371 | 209 | 9 | 131 | 488 | 297 | 649 | 1.98e-59 | 207 |
MS.gene64380.t1 | AT1G50420 | 31.614 | 446 | 217 | 11 | 118 | 489 | 48 | 479 | 3.33e-58 | 200 |
MS.gene64380.t1 | AT1G63100 | 30.286 | 525 | 291 | 14 | 28 | 488 | 115 | 628 | 3.37e-58 | 204 |
MS.gene64380.t1 | AT1G63100 | 34.606 | 393 | 220 | 10 | 122 | 488 | 272 | 653 | 7.00e-58 | 203 |
MS.gene64380.t1 | AT4G17230 | 35.219 | 389 | 221 | 12 | 122 | 492 | 153 | 528 | 3.28e-55 | 193 |
MS.gene64380.t1 | AT4G17230 | 35.219 | 389 | 221 | 12 | 122 | 492 | 153 | 528 | 3.28e-55 | 193 |
MS.gene64380.t1 | AT1G55580 | 34.359 | 390 | 217 | 13 | 119 | 489 | 76 | 445 | 2.47e-49 | 176 |
MS.gene64380.t1 | AT1G07530 | 32.570 | 393 | 245 | 9 | 109 | 488 | 379 | 764 | 3.95e-49 | 181 |
MS.gene64380.t1 | AT5G66770 | 33.148 | 359 | 215 | 10 | 148 | 489 | 234 | 584 | 1.05e-47 | 174 |
MS.gene64380.t1 | AT5G59450 | 29.574 | 399 | 256 | 9 | 108 | 489 | 208 | 598 | 4.73e-47 | 172 |
MS.gene64380.t1 | AT3G46600 | 29.899 | 398 | 260 | 9 | 104 | 489 | 157 | 547 | 1.70e-46 | 170 |
MS.gene64380.t1 | AT3G46600 | 29.899 | 398 | 260 | 9 | 104 | 489 | 189 | 579 | 2.48e-46 | 170 |
MS.gene64380.t1 | AT3G46600 | 30.423 | 378 | 244 | 9 | 124 | 489 | 1 | 371 | 1.21e-45 | 164 |
MS.gene64380.t1 | AT2G29060 | 30.729 | 384 | 245 | 10 | 124 | 493 | 281 | 657 | 9.69e-44 | 164 |
MS.gene64380.t1 | AT3G50650 | 33.721 | 344 | 201 | 8 | 163 | 489 | 209 | 542 | 1.10e-43 | 162 |
MS.gene64380.t1 | AT2G29060 | 30.729 | 384 | 245 | 10 | 124 | 493 | 318 | 694 | 1.38e-43 | 164 |
MS.gene64380.t1 | AT2G29065 | 27.436 | 390 | 241 | 9 | 127 | 488 | 252 | 627 | 1.46e-38 | 149 |
MS.gene64380.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 117 | 488 | 144 | 528 | 1.82e-38 | 147 |
MS.gene64380.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 117 | 488 | 144 | 528 | 1.82e-38 | 147 |
MS.gene64380.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 117 | 488 | 308 | 692 | 2.56e-38 | 149 |
MS.gene64380.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 117 | 488 | 309 | 693 | 2.89e-38 | 149 |
MS.gene64380.t1 | AT4G08250 | 29.668 | 391 | 247 | 17 | 116 | 488 | 96 | 476 | 5.02e-38 | 145 |
MS.gene64380.t1 | AT2G37650 | 28.052 | 385 | 247 | 10 | 122 | 489 | 330 | 701 | 4.91e-36 | 142 |
MS.gene64380.t1 | AT2G37650 | 27.792 | 385 | 248 | 10 | 122 | 489 | 342 | 713 | 5.46e-36 | 142 |
MS.gene64380.t1 | AT5G52510 | 29.565 | 345 | 215 | 9 | 165 | 489 | 304 | 640 | 1.36e-35 | 140 |
MS.gene64380.t1 | AT4G00150 | 27.960 | 397 | 248 | 12 | 102 | 489 | 187 | 554 | 2.52e-34 | 136 |
MS.gene64380.t1 | AT4G37650 | 27.882 | 373 | 229 | 11 | 151 | 489 | 163 | 529 | 8.29e-33 | 131 |
MS.gene64380.t1 | AT2G45160 | 29.558 | 362 | 216 | 11 | 151 | 489 | 294 | 639 | 1.04e-31 | 129 |
MS.gene64380.t1 | AT3G60630 | 28.758 | 306 | 192 | 9 | 197 | 489 | 330 | 622 | 4.65e-29 | 121 |
MS.gene64380.t1 | AT3G49950 | 27.551 | 392 | 250 | 14 | 126 | 493 | 29 | 410 | 6.52e-29 | 118 |
MS.gene64380.t1 | AT4G36710 | 26.253 | 419 | 273 | 12 | 86 | 489 | 88 | 485 | 7.21e-28 | 116 |
MS.gene64380.t1 | AT3G13840 | 25.309 | 324 | 198 | 11 | 184 | 489 | 213 | 510 | 1.06e-16 | 83.2 |
Find 138 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATAACGAGAACGGGTTTA+TGG | 0.172499 | 2.4:+35681238 | MS.gene64380:CDS |
TTCGGGTATTGAAATGGTTT+TGG | 0.204240 | 2.4:+35681160 | MS.gene64380:CDS |
CGGGTTCAGACCGTTGCATT+TGG | 0.261310 | 2.4:+35681454 | MS.gene64380:CDS |
CCATAAACCCGTTCTCGTTA+TGG | 0.276597 | 2.4:-35681238 | None:intergenic |
CCGGCCTTTGATTGCGGCTT+CGG | 0.318572 | 2.4:+35681580 | MS.gene64380:CDS |
TCAATACCCGAATGAGAATT+CGG | 0.329389 | 2.4:-35681149 | None:intergenic |
TTTCAGCTTCATCGTCTTCT+CGG | 0.339157 | 2.4:+35681113 | MS.gene64380:CDS |
CGGCATTGGTCCGCCGTCGC+TGG | 0.354188 | 2.4:+35680926 | MS.gene64380:CDS |
CCTCCGTTTCTCCGGCTTAC+CGG | 0.355777 | 2.4:+35680906 | MS.gene64380:CDS |
CTTTGATTGCGGCTTCGGCT+TGG | 0.374762 | 2.4:+35681585 | MS.gene64380:CDS |
CACTATGATCCCTCCGACAT+TGG | 0.380904 | 2.4:+35680327 | MS.gene64380:CDS |
CGTGACAACCTCCGTGAAAT+CGG | 0.385600 | 2.4:+35680954 | MS.gene64380:CDS |
ATCCCTCCGACATTGGCAAT+TGG | 0.385878 | 2.4:+35680334 | MS.gene64380:CDS |
GAATCAAGGGAGCTTGACTT+TGG | 0.395394 | 2.4:+35681547 | MS.gene64380:CDS |
TTCTCATTCGGGTATTGAAA+TGG | 0.397931 | 2.4:+35681154 | MS.gene64380:CDS |
GGGTTCAGACCGTTGCATTT+GGG | 0.405803 | 2.4:+35681455 | MS.gene64380:CDS |
TTTCTCCGGCTTACCGGCAT+TGG | 0.406008 | 2.4:+35680912 | MS.gene64380:CDS |
TGACTCGCTTGAAGCGTGTC+CGG | 0.418691 | 2.4:+35681301 | MS.gene64380:CDS |
GCTTTGAACCGTCGCATCTT+CGG | 0.420783 | 2.4:+35680660 | MS.gene64380:CDS |
TTCGAGTATAGCTTGATTTG+CGG | 0.426009 | 2.4:-35680781 | None:intergenic |
TCCGGCATCGGAAAAGTTGC+CGG | 0.427913 | 2.4:+35680624 | MS.gene64380:CDS |
CGTGGTGTGCTGCGAGGGAC+CGG | 0.428279 | 2.4:+35681376 | MS.gene64380:CDS |
AACGTTAGATTCGCCTTTCG+CGG | 0.429000 | 2.4:+35681008 | MS.gene64380:CDS |
CCACGCCGCAACGCCGCGAA+AGG | 0.429090 | 2.4:-35681021 | None:intergenic |
TGTAAAGCCATGGATGCTTC+AGG | 0.430657 | 2.4:+35681055 | MS.gene64380:CDS |
AATCAAGGGAGCTTGACTTT+GGG | 0.434762 | 2.4:+35681548 | MS.gene64380:CDS |
AGAGGCCGTGTGGTCAAATT+CGG | 0.437374 | 2.4:-35680373 | None:intergenic |
TGACTTTGGGTTGGCATAGC+CGG | 0.439605 | 2.4:+35681561 | MS.gene64380:CDS |
CGGGTTTATGGAACGGTTCA+CGG | 0.439903 | 2.4:+35681250 | MS.gene64380:CDS |
CAAGCTCTTGCTCTTCGTCC+TGG | 0.444577 | 2.4:+35680879 | MS.gene64380:CDS |
TCCCTCCGACATTGGCAATT+GGG | 0.446214 | 2.4:+35680335 | MS.gene64380:CDS |
CGGTGAAGTGTGCGAATTTG+AGG | 0.451224 | 2.4:-35680761 | None:intergenic |
AAGAAGATTGGTGGTGGTGG+TGG | 0.451641 | 2.4:-35680452 | None:intergenic |
CGAGACGGAGGCCGATTTCA+CGG | 0.453634 | 2.4:-35680965 | None:intergenic |
TGGTGGTGGTGGTGTGGCGG+CGG | 0.454745 | 2.4:-35680435 | None:intergenic |
ATCCGACCCGAATTCTCATT+CGG | 0.456753 | 2.4:+35681142 | MS.gene64380:CDS |
CAATACCCGAATGAGAATTC+GGG | 0.457985 | 2.4:-35681148 | None:intergenic |
ATCTCGGCCATAGCTTTATC+CGG | 0.466984 | 2.4:-35681329 | None:intergenic |
TCCGACCCGAATTCTCATTC+GGG | 0.467756 | 2.4:+35681143 | MS.gene64380:CDS |
ATAGCTTTATCCGGTTCAAC+CGG | 0.472673 | 2.4:-35681320 | None:intergenic |
AAGCGAACCATAACGAGAAC+GGG | 0.473338 | 2.4:+35681231 | MS.gene64380:CDS |
GGCGGCGGTGCTGAGAGATC+TGG | 0.474673 | 2.4:-35680420 | None:intergenic |
TGAAGCGTGTCCGGTTGAAC+CGG | 0.475946 | 2.4:+35681310 | MS.gene64380:CDS |
CAGCGACGGCGGACCAATGC+CGG | 0.478193 | 2.4:-35680925 | None:intergenic |
GACATGAACCGTTGGTTAAG+TGG | 0.479723 | 2.4:+35681411 | MS.gene64380:CDS |
CGACATTTCTCAATTCGCTT+CGG | 0.481188 | 2.4:+35680296 | MS.gene64380:CDS |
AAGGAGCGGCTCGGTAAAGC+CGG | 0.483410 | 2.4:+35681434 | MS.gene64380:CDS |
CCTTTCGCGGCGTTGCGGCG+TGG | 0.496391 | 2.4:+35681021 | MS.gene64380:CDS |
CGGAGAAACGGAGGTCCGCC+AGG | 0.496483 | 2.4:-35680897 | None:intergenic |
CGTGGTAATCTTCCATTGGC+TGG | 0.502641 | 2.4:+35680552 | MS.gene64380:CDS |
TATTAACTGTCGAAGAAGAT+TGG | 0.503596 | 2.4:-35680464 | None:intergenic |
TTCGCGGCGTTGCGGCGTGG+CGG | 0.506872 | 2.4:+35681024 | MS.gene64380:CDS |
CTCTCTTTGTAAATACATCT+CGG | 0.511803 | 2.4:-35681345 | None:intergenic |
CAAAGCGTCGATGAAGTATC+CGG | 0.512312 | 2.4:-35680643 | None:intergenic |
CTGGCGGACCTCCGTTTCTC+CGG | 0.512726 | 2.4:+35680898 | MS.gene64380:CDS |
GCGGACCAATGCCGGTAAGC+CGG | 0.513787 | 2.4:-35680917 | None:intergenic |
ACCTCATGCATGGTCTTCAA+TGG | 0.514040 | 2.4:+35680844 | MS.gene64380:CDS |
GAACTCACCTGAAGCATCCA+TGG | 0.518449 | 2.4:-35681062 | None:intergenic |
GCATAGCCGGCCTTTGATTG+CGG | 0.520541 | 2.4:+35681574 | MS.gene64380:CDS |
ATTCGCCTTTCGCGGCGTTG+CGG | 0.526404 | 2.4:+35681016 | MS.gene64380:CDS |
CAAGCCGAAGCCGCAATCAA+AGG | 0.528493 | 2.4:-35681584 | None:intergenic |
AAGGGAGCTTGACTTTGGGT+TGG | 0.530891 | 2.4:+35681552 | MS.gene64380:CDS |
TCGTTAATCGAAGGCATGCA+AGG | 0.531649 | 2.4:+35680576 | MS.gene64380:CDS |
CCGAAGCCGCAATCAAAGGC+CGG | 0.539000 | 2.4:-35681580 | None:intergenic |
CGCTCCTTCCACTTAACCAA+CGG | 0.539436 | 2.4:-35681419 | None:intergenic |
ATGCCGGTAAGCCGGAGAAA+CGG | 0.543739 | 2.4:-35680909 | None:intergenic |
CGTTCTCGTAAAGAGAAACT+TGG | 0.543788 | 2.4:-35680701 | None:intergenic |
TCGATTAACGAGCCAGCCAA+TGG | 0.545335 | 2.4:-35680564 | None:intergenic |
CAAATGCAACGGTCTGAACC+CGG | 0.552323 | 2.4:-35681453 | None:intergenic |
GCAACGTGGTAATCTTCCAT+TGG | 0.552649 | 2.4:+35680548 | MS.gene64380:CDS |
AGAGAAATCGTAGGGTAAAG+AGG | 0.554274 | 2.4:-35680391 | None:intergenic |
ATGAACACAATCTCCGGCAT+CGG | 0.555034 | 2.4:+35680612 | MS.gene64380:CDS |
TCTGACTTTGTAGCCGACAT+TGG | 0.557024 | 2.4:-35680205 | None:intergenic |
GCAAACATGAACACAATCTC+CGG | 0.557304 | 2.4:+35680606 | MS.gene64380:CDS |
AAGTGTGCGAATTTGAGGTA+TGG | 0.557638 | 2.4:-35680756 | None:intergenic |
TGGAAGATTACCACGTTGCA+CGG | 0.558728 | 2.4:-35680544 | None:intergenic |
CACCCAATTGCCAATGTCGG+AGG | 0.559532 | 2.4:-35680337 | None:intergenic |
ATTGATTTCAACCTCATGCA+TGG | 0.563574 | 2.4:+35680834 | MS.gene64380:CDS |
AAAGGCGAATCTAACGTTAA+CGG | 0.563777 | 2.4:-35681003 | None:intergenic |
AGGAGCGGCTCGGTAAAGCC+GGG | 0.565092 | 2.4:+35681435 | MS.gene64380:CDS |
TCATGTCTCTCAACTCGAGC+CGG | 0.568274 | 2.4:-35681395 | None:intergenic |
TATTGCGTGGAAGAGAATCA+AGG | 0.570726 | 2.4:+35681533 | MS.gene64380:CDS |
GAAGCGAACCATAACGAGAA+CGG | 0.581490 | 2.4:+35681230 | MS.gene64380:CDS |
GTCCACCCAATTGCCAATGT+CGG | 0.582283 | 2.4:-35680340 | None:intergenic |
GGCAAGCTTCGTAGTAGTGA+TGG | 0.587241 | 2.4:-35680734 | None:intergenic |
ACGTTGCACGGAATCTGCAC+AGG | 0.591505 | 2.4:-35680532 | None:intergenic |
TGCAACGTGGTGTGCTGCGA+GGG | 0.592419 | 2.4:+35681371 | MS.gene64380:CDS |
CTTTGTAGCCGACATTGGCA+AGG | 0.593493 | 2.4:-35680200 | None:intergenic |
GGTTGAACCGGATAAAGCTA+TGG | 0.595176 | 2.4:+35681322 | MS.gene64380:CDS |
TCTCGTAAAGAGAAACTTGG+TGG | 0.598426 | 2.4:-35680698 | None:intergenic |
TCGAAGAAGATTGGTGGTGG+TGG | 0.598533 | 2.4:-35680455 | None:intergenic |
CGATTTCACGGAGGTTGTCA+CGG | 0.600453 | 2.4:-35680953 | None:intergenic |
GGAAGTTCAGAGAAATCGTA+GGG | 0.603775 | 2.4:-35680399 | None:intergenic |
GCTCTTGCTCTTCGTCCTGG+CGG | 0.606990 | 2.4:+35680882 | MS.gene64380:CDS |
CTCCGACATTGGCAATTGGG+TGG | 0.609033 | 2.4:+35680338 | MS.gene64380:CDS |
ACCCAATTGCCAATGTCGGA+GGG | 0.609324 | 2.4:-35680336 | None:intergenic |
TAACTGTCGAAGAAGATTGG+TGG | 0.611571 | 2.4:-35680461 | None:intergenic |
TGGAAGTTCAGAGAAATCGT+AGG | 0.615760 | 2.4:-35680400 | None:intergenic |
AGCGTGCAAGTTCAGCGAGA+CGG | 0.617149 | 2.4:-35680980 | None:intergenic |
AGTGTGCGAATTTGAGGTAT+GGG | 0.618649 | 2.4:-35680755 | None:intergenic |
GACGGCCTCCTTGCCAATGT+CGG | 0.620771 | 2.4:+35680192 | MS.gene64380:CDS |
CGTTAATCGAAGGCATGCAA+GGG | 0.622830 | 2.4:+35680577 | MS.gene64380:CDS |
TGAACCGTTGGTTAAGTGGA+AGG | 0.623165 | 2.4:+35681415 | MS.gene64380:CDS |
ACGAGAACGGGTTTATGGAA+CGG | 0.624479 | 2.4:+35681243 | MS.gene64380:CDS |
GCTATACTCGAAGCTTTCAA+CGG | 0.625134 | 2.4:+35680792 | MS.gene64380:CDS |
CAATGACGTGGACACAATCG+TGG | 0.629821 | 2.4:-35680815 | None:intergenic |
GTTAAGTGGAAGGAGCGGCT+CGG | 0.631755 | 2.4:+35681425 | MS.gene64380:CDS |
TTGGCTGGCTCGTTAATCGA+AGG | 0.631890 | 2.4:+35680567 | MS.gene64380:CDS |
TTCAGCGGAGGGTTATTGCG+TGG | 0.637968 | 2.4:+35681520 | MS.gene64380:CDS |
ATTGCGTGGAAGAGAATCAA+GGG | 0.640198 | 2.4:+35681534 | MS.gene64380:CDS |
AGTTGAGAGACATGAACCGT+TGG | 0.643232 | 2.4:+35681403 | MS.gene64380:CDS |
GCATTCGAACCCAAATGCAA+CGG | 0.649133 | 2.4:-35681464 | None:intergenic |
GCAAGAGCTTGAATTAACGC+TGG | 0.649987 | 2.4:-35680867 | None:intergenic |
TCACGGTCATCCAGCGACGG+CGG | 0.651033 | 2.4:-35680936 | None:intergenic |
CAATGTCGGAGGGATCATAG+TGG | 0.653195 | 2.4:-35680326 | None:intergenic |
GGTGAGTTCTAAAGAAGCTG+TGG | 0.654073 | 2.4:+35681076 | MS.gene64380:CDS |
GTGCAAGTTCAGCGAGACGG+AGG | 0.656208 | 2.4:-35680977 | None:intergenic |
GAGTTCTAAAGAAGCTGTGG+CGG | 0.658727 | 2.4:+35681079 | MS.gene64380:CDS |
TTGTCACGGTCATCCAGCGA+CGG | 0.659920 | 2.4:-35680939 | None:intergenic |
CGTTGGTTAAGTGGAAGGAG+CGG | 0.660011 | 2.4:+35681420 | MS.gene64380:CDS |
TGTAGCCGACATTGGCAAGG+AGG | 0.660431 | 2.4:-35680197 | None:intergenic |
AGCGTTTCAGCATCTAACAA+AGG | 0.663922 | 2.4:-35681617 | None:intergenic |
TCAAAGACAAAAGACATCGA+CGG | 0.665997 | 2.4:+35680174 | MS.gene64380:CDS |
CTGTCGAAGAAGATTGGTGG+TGG | 0.666801 | 2.4:-35680458 | None:intergenic |
CTGCACAGGTCATCAGCATG+TGG | 0.667697 | 2.4:-35680518 | None:intergenic |
CCGGTAAGCCGGAGAAACGG+AGG | 0.669681 | 2.4:-35680906 | None:intergenic |
CCTCTCCGAATTTGACCACA+CGG | 0.676826 | 2.4:+35680368 | MS.gene64380:CDS |
GGCTTGAAGATGTAAAGCCA+TGG | 0.681200 | 2.4:+35681045 | MS.gene64380:CDS |
CGTAGGGTAAAGAGGCCGTG+TGG | 0.707233 | 2.4:-35680383 | None:intergenic |
GCCATTGAAGACCATGCATG+AGG | 0.712810 | 2.4:-35680845 | None:intergenic |
ACCCGAATGAGAATTCGGGT+CGG | 0.713077 | 2.4:-35681144 | None:intergenic |
CCGTGTGGTCAAATTCGGAG+AGG | 0.714620 | 2.4:-35680368 | None:intergenic |
ATGCAACGTGGTGTGCTGCG+AGG | 0.715668 | 2.4:+35681370 | MS.gene64380:CDS |
TGAGGTTGAAATCAATGACG+TGG | 0.716676 | 2.4:-35680827 | None:intergenic |
GACGGAGGCCGATTTCACGG+AGG | 0.751201 | 2.4:-35680962 | None:intergenic |
TGTGCAGATTCCGTGCAACG+TGG | 0.753527 | 2.4:+35680534 | MS.gene64380:CDS |
GTTTATGGAACGGTTCACGG+AGG | 0.758651 | 2.4:+35681253 | MS.gene64380:CDS |
ACAAAGAGAGATATGCAACG+TGG | 0.806079 | 2.4:+35681358 | MS.gene64380:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
CTCTCTTTGTAAATACATCT+CGG | - | chr2.4:35681348-35681367 | None:intergenic | 30.0% | |
TATTAACTGTCGAAGAAGAT+TGG | - | chr2.4:35680467-35680486 | None:intergenic | 30.0% | |
! | TCAACAACTGTAACGATTTT+CGG | - | chr2.4:35681206-35681225 | None:intergenic | 30.0% |
AAAGGCGAATCTAACGTTAA+CGG | - | chr2.4:35681006-35681025 | None:intergenic | 35.0% | |
TCAAAGACAAAAGACATCGA+CGG | + | chr2.4:35680174-35680193 | MS.gene64380:CDS | 35.0% | |
TCAATACCCGAATGAGAATT+CGG | - | chr2.4:35681152-35681171 | None:intergenic | 35.0% | |
! | ATTGATTTCAACCTCATGCA+TGG | + | chr2.4:35680834-35680853 | MS.gene64380:CDS | 35.0% |
! | CGATGTCTTTTGTCTTTGAT+GGG | - | chr2.4:35680173-35680192 | None:intergenic | 35.0% |
! | GATGTCTTTTGTCTTTGATG+GGG | - | chr2.4:35680172-35680191 | None:intergenic | 35.0% |
! | TCGATGTCTTTTGTCTTTGA+TGG | - | chr2.4:35680174-35680193 | None:intergenic | 35.0% |
! | TTCGAGTATAGCTTGATTTG+CGG | - | chr2.4:35680784-35680803 | None:intergenic | 35.0% |
!! | TTCTCATTCGGGTATTGAAA+TGG | + | chr2.4:35681154-35681173 | MS.gene64380:CDS | 35.0% |
!!! | GTATTGAAATGGTTTTGGGT+TGG | + | chr2.4:35681165-35681184 | MS.gene64380:CDS | 35.0% |
!!! | TCGGGTATTGAAATGGTTTT+GGG | + | chr2.4:35681161-35681180 | MS.gene64380:CDS | 35.0% |
!!! | TTCGGGTATTGAAATGGTTT+TGG | + | chr2.4:35681160-35681179 | MS.gene64380:CDS | 35.0% |
AATCAAGGGAGCTTGACTTT+GGG | + | chr2.4:35681548-35681567 | MS.gene64380:CDS | 40.0% | |
ACAAAGAGAGATATGCAACG+TGG | + | chr2.4:35681358-35681377 | MS.gene64380:CDS | 40.0% | |
AGAGAAATCGTAGGGTAAAG+AGG | - | chr2.4:35680394-35680413 | None:intergenic | 40.0% | |
AGCGTTTCAGCATCTAACAA+AGG | - | chr2.4:35681620-35681639 | None:intergenic | 40.0% | |
ATTGCGTGGAAGAGAATCAA+GGG | + | chr2.4:35681534-35681553 | MS.gene64380:CDS | 40.0% | |
CAATACCCGAATGAGAATTC+GGG | - | chr2.4:35681151-35681170 | None:intergenic | 40.0% | |
CGACATTTCTCAATTCGCTT+CGG | + | chr2.4:35680296-35680315 | MS.gene64380:CDS | 40.0% | |
CGTTCTCGTAAAGAGAAACT+TGG | - | chr2.4:35680704-35680723 | None:intergenic | 40.0% | |
GCAAACATGAACACAATCTC+CGG | + | chr2.4:35680606-35680625 | MS.gene64380:CDS | 40.0% | |
GCTATACTCGAAGCTTTCAA+CGG | + | chr2.4:35680792-35680811 | MS.gene64380:CDS | 40.0% | |
GGAAGTTCAGAGAAATCGTA+GGG | - | chr2.4:35680402-35680421 | None:intergenic | 40.0% | |
TAACTGTCGAAGAAGATTGG+TGG | - | chr2.4:35680464-35680483 | None:intergenic | 40.0% | |
TATTGCGTGGAAGAGAATCA+AGG | + | chr2.4:35681533-35681552 | MS.gene64380:CDS | 40.0% | |
TCTCGTAAAGAGAAACTTGG+TGG | - | chr2.4:35680701-35680720 | None:intergenic | 40.0% | |
TGAGGTTGAAATCAATGACG+TGG | - | chr2.4:35680830-35680849 | None:intergenic | 40.0% | |
TGGAAGTTCAGAGAAATCGT+AGG | - | chr2.4:35680403-35680422 | None:intergenic | 40.0% | |
TTTCAGCTTCATCGTCTTCT+CGG | + | chr2.4:35681113-35681132 | MS.gene64380:CDS | 40.0% | |
! | AAGTGTGCGAATTTGAGGTA+TGG | - | chr2.4:35680759-35680778 | None:intergenic | 40.0% |
! | AGTGTGCGAATTTGAGGTAT+GGG | - | chr2.4:35680758-35680777 | None:intergenic | 40.0% |
! | CGATTTTCGGATTCAAACTC+CGG | - | chr2.4:35681193-35681212 | None:intergenic | 40.0% |
!! | ATAGCTTTATCCGGTTCAAC+CGG | - | chr2.4:35681323-35681342 | None:intergenic | 40.0% |
!!! | AAATGGTTTTGGGTTGGATC+CGG | + | chr2.4:35681171-35681190 | MS.gene64380:CDS | 40.0% |
!!! | GTTGTTGACTCTGTTTTCAG+CGG | + | chr2.4:35681505-35681524 | MS.gene64380:CDS | 40.0% |
AACGTTAGATTCGCCTTTCG+CGG | + | chr2.4:35681008-35681027 | MS.gene64380:CDS | 45.0% | |
AAGCGAACCATAACGAGAAC+GGG | + | chr2.4:35681231-35681250 | MS.gene64380:CDS | 45.0% | |
ACCTCATGCATGGTCTTCAA+TGG | + | chr2.4:35680844-35680863 | MS.gene64380:CDS | 45.0% | |
AGTTGAGAGACATGAACCGT+TGG | + | chr2.4:35681403-35681422 | MS.gene64380:CDS | 45.0% | |
ATCCGACCCGAATTCTCATT+CGG | + | chr2.4:35681142-35681161 | MS.gene64380:CDS | 45.0% | |
ATGAACACAATCTCCGGCAT+CGG | + | chr2.4:35680612-35680631 | MS.gene64380:CDS | 45.0% | |
CCATAAACCCGTTCTCGTTA+TGG | - | chr2.4:35681241-35681260 | None:intergenic | 45.0% | |
CGCTTCAAGCGAGTCAAAAA+CGG | - | chr2.4:35681297-35681316 | None:intergenic | 45.0% | |
GAAGCGAACCATAACGAGAA+CGG | + | chr2.4:35681230-35681249 | MS.gene64380:CDS | 45.0% | |
GAATCAAGGGAGCTTGACTT+TGG | + | chr2.4:35681547-35681566 | MS.gene64380:CDS | 45.0% | |
GCAACGTGGTAATCTTCCAT+TGG | + | chr2.4:35680548-35680567 | MS.gene64380:CDS | 45.0% | |
GCAAGAGCTTGAATTAACGC+TGG | - | chr2.4:35680870-35680889 | None:intergenic | 45.0% | |
GCATTCGAACCCAAATGCAA+CGG | - | chr2.4:35681467-35681486 | None:intergenic | 45.0% | |
GGCTTGAAGATGTAAAGCCA+TGG | + | chr2.4:35681045-35681064 | MS.gene64380:CDS | 45.0% | |
GGTTGAACCGGATAAAGCTA+TGG | + | chr2.4:35681322-35681341 | MS.gene64380:CDS | 45.0% | |
TCTGACTTTGTAGCCGACAT+TGG | - | chr2.4:35680208-35680227 | None:intergenic | 45.0% | |
TGGAAGATTACCACGTTGCA+CGG | - | chr2.4:35680547-35680566 | None:intergenic | 45.0% | |
TGTAAAGCCATGGATGCTTC+AGG | + | chr2.4:35681055-35681074 | MS.gene64380:CDS | 45.0% | |
! | ACGAGAACGGGTTTATGGAA+CGG | + | chr2.4:35681243-35681262 | MS.gene64380:CDS | 45.0% |
! | CAGCATGTGGACGAGTTTTA+TGG | - | chr2.4:35680508-35680527 | None:intergenic | 45.0% |
! | CCATAACGAGAACGGGTTTA+TGG | + | chr2.4:35681238-35681257 | MS.gene64380:CDS | 45.0% |
! | CGTTAATCGAAGGCATGCAA+GGG | + | chr2.4:35680577-35680596 | MS.gene64380:CDS | 45.0% |
! | GACATGAACCGTTGGTTAAG+TGG | + | chr2.4:35681411-35681430 | MS.gene64380:CDS | 45.0% |
! | TCGTTAATCGAAGGCATGCA+AGG | + | chr2.4:35680576-35680595 | MS.gene64380:CDS | 45.0% |
! | TGAACCGTTGGTTAAGTGGA+AGG | + | chr2.4:35681415-35681434 | MS.gene64380:CDS | 45.0% |
! | TTGACTCTGTTTTCAGCGGA+GGG | + | chr2.4:35681509-35681528 | MS.gene64380:CDS | 45.0% |
!! | ATCTCGGCCATAGCTTTATC+CGG | - | chr2.4:35681332-35681351 | None:intergenic | 45.0% |
!! | CAAAGCGTCGATGAAGTATC+CGG | - | chr2.4:35680646-35680665 | None:intergenic | 45.0% |
!! | GAGTTCTAAAGAAGCTGTGG+CGG | + | chr2.4:35681079-35681098 | MS.gene64380:CDS | 45.0% |
!! | GGTGAGTTCTAAAGAAGCTG+TGG | + | chr2.4:35681076-35681095 | MS.gene64380:CDS | 45.0% |
!!! | TGTTTTGACCGAAGATGCGA+CGG | - | chr2.4:35680671-35680690 | None:intergenic | 45.0% |
AAGGGAGCTTGACTTTGGGT+TGG | + | chr2.4:35681552-35681571 | MS.gene64380:CDS | 50.0% | |
ACCCAATTGCCAATGTCGGA+GGG | - | chr2.4:35680339-35680358 | None:intergenic | 50.0% | |
ACCCGAATGAGAATTCGGGT+CGG | - | chr2.4:35681147-35681166 | None:intergenic | 50.0% | |
AGAGGCCGTGTGGTCAAATT+CGG | - | chr2.4:35680376-35680395 | None:intergenic | 50.0% | |
ATCCCTCCGACATTGGCAAT+TGG | + | chr2.4:35680334-35680353 | MS.gene64380:CDS | 50.0% | |
CAAATGCAACGGTCTGAACC+CGG | - | chr2.4:35681456-35681475 | None:intergenic | 50.0% | |
CAATGACGTGGACACAATCG+TGG | - | chr2.4:35680818-35680837 | None:intergenic | 50.0% | |
CAATGTCGGAGGGATCATAG+TGG | - | chr2.4:35680329-35680348 | None:intergenic | 50.0% | |
CACTATGATCCCTCCGACAT+TGG | + | chr2.4:35680327-35680346 | MS.gene64380:CDS | 50.0% | |
CCTCTCCGAATTTGACCACA+CGG | + | chr2.4:35680368-35680387 | MS.gene64380:CDS | 50.0% | |
CGATTTCACGGAGGTTGTCA+CGG | - | chr2.4:35680956-35680975 | None:intergenic | 50.0% | |
CGCTCCTTCCACTTAACCAA+CGG | - | chr2.4:35681422-35681441 | None:intergenic | 50.0% | |
CGGGTTTATGGAACGGTTCA+CGG | + | chr2.4:35681250-35681269 | MS.gene64380:CDS | 50.0% | |
CGGTGAAGTGTGCGAATTTG+AGG | - | chr2.4:35680764-35680783 | None:intergenic | 50.0% | |
CGTGACAACCTCCGTGAAAT+CGG | + | chr2.4:35680954-35680973 | MS.gene64380:CDS | 50.0% | |
CGTGGTAATCTTCCATTGGC+TGG | + | chr2.4:35680552-35680571 | MS.gene64380:CDS | 50.0% | |
CTGTCGAAGAAGATTGGTGG+TGG | - | chr2.4:35680461-35680480 | None:intergenic | 50.0% | |
CTTTGTAGCCGACATTGGCA+AGG | - | chr2.4:35680203-35680222 | None:intergenic | 50.0% | |
GCCATTGAAGACCATGCATG+AGG | - | chr2.4:35680848-35680867 | None:intergenic | 50.0% | |
GGCAAGCTTCGTAGTAGTGA+TGG | - | chr2.4:35680737-35680756 | None:intergenic | 50.0% | |
GGGTTCAGACCGTTGCATTT+GGG | + | chr2.4:35681455-35681474 | MS.gene64380:CDS | 50.0% | |
GTCCACCCAATTGCCAATGT+CGG | - | chr2.4:35680343-35680362 | None:intergenic | 50.0% | |
GTTTATGGAACGGTTCACGG+AGG | + | chr2.4:35681253-35681272 | MS.gene64380:CDS | 50.0% | |
TCATGTCTCTCAACTCGAGC+CGG | - | chr2.4:35681398-35681417 | None:intergenic | 50.0% | |
TCCCTCCGACATTGGCAATT+GGG | + | chr2.4:35680335-35680354 | MS.gene64380:CDS | 50.0% | |
TCCGACCCGAATTCTCATTC+GGG | + | chr2.4:35681143-35681162 | MS.gene64380:CDS | 50.0% | |
TCGATTAACGAGCCAGCCAA+TGG | - | chr2.4:35680567-35680586 | None:intergenic | 50.0% | |
! | CGTTGGTTAAGTGGAAGGAG+CGG | + | chr2.4:35681420-35681439 | MS.gene64380:CDS | 50.0% |
! | GAACTCACCTGAAGCATCCA+TGG | - | chr2.4:35681065-35681084 | None:intergenic | 50.0% |
! | GCTTTGAACCGTCGCATCTT+CGG | + | chr2.4:35680660-35680679 | MS.gene64380:CDS | 50.0% |
!! | AAGAAGATTGGTGGTGGTGG+TGG | - | chr2.4:35680455-35680474 | None:intergenic | 50.0% |
!! | GTTGACTCTGTTTTCAGCGG+AGG | + | chr2.4:35681508-35681527 | MS.gene64380:CDS | 50.0% |
!! | TCGAAGAAGATTGGTGGTGG+TGG | - | chr2.4:35680458-35680477 | None:intergenic | 50.0% |
!! | TGACTTTGGGTTGGCATAGC+CGG | + | chr2.4:35681561-35681580 | MS.gene64380:CDS | 50.0% |
!! | TTGGCTGGCTCGTTAATCGA+AGG | + | chr2.4:35680567-35680586 | MS.gene64380:CDS | 50.0% |
ACGTTGCACGGAATCTGCAC+AGG | - | chr2.4:35680535-35680554 | None:intergenic | 55.0% | |
AGCGTGCAAGTTCAGCGAGA+CGG | - | chr2.4:35680983-35681002 | None:intergenic | 55.0% | |
ATGCCGGTAAGCCGGAGAAA+CGG | - | chr2.4:35680912-35680931 | None:intergenic | 55.0% | |
CAAGCCGAAGCCGCAATCAA+AGG | - | chr2.4:35681587-35681606 | None:intergenic | 55.0% | |
CAAGCTCTTGCTCTTCGTCC+TGG | + | chr2.4:35680879-35680898 | MS.gene64380:CDS | 55.0% | |
CACCCAATTGCCAATGTCGG+AGG | - | chr2.4:35680340-35680359 | None:intergenic | 55.0% | |
CCGTGTGGTCAAATTCGGAG+AGG | - | chr2.4:35680371-35680390 | None:intergenic | 55.0% | |
CGGGTTCAGACCGTTGCATT+TGG | + | chr2.4:35681454-35681473 | MS.gene64380:CDS | 55.0% | |
CTCCGACATTGGCAATTGGG+TGG | + | chr2.4:35680338-35680357 | MS.gene64380:CDS | 55.0% | |
CTGCACAGGTCATCAGCATG+TGG | - | chr2.4:35680521-35680540 | None:intergenic | 55.0% | |
CTTTGATTGCGGCTTCGGCT+TGG | + | chr2.4:35681585-35681604 | MS.gene64380:CDS | 55.0% | |
GCATAGCCGGCCTTTGATTG+CGG | + | chr2.4:35681574-35681593 | MS.gene64380:CDS | 55.0% | |
GTTAAGTGGAAGGAGCGGCT+CGG | + | chr2.4:35681425-35681444 | MS.gene64380:CDS | 55.0% | |
TGAAGCGTGTCCGGTTGAAC+CGG | + | chr2.4:35681310-35681329 | MS.gene64380:CDS | 55.0% | |
TGACTCGCTTGAAGCGTGTC+CGG | + | chr2.4:35681301-35681320 | MS.gene64380:CDS | 55.0% | |
TGTAGCCGACATTGGCAAGG+AGG | - | chr2.4:35680200-35680219 | None:intergenic | 55.0% | |
TGTGCAGATTCCGTGCAACG+TGG | + | chr2.4:35680534-35680553 | MS.gene64380:CDS | 55.0% | |
TTCAGCGGAGGGTTATTGCG+TGG | + | chr2.4:35681520-35681539 | MS.gene64380:CDS | 55.0% | |
TTGTCACGGTCATCCAGCGA+CGG | - | chr2.4:35680942-35680961 | None:intergenic | 55.0% | |
TTTCTCCGGCTTACCGGCAT+TGG | + | chr2.4:35680912-35680931 | MS.gene64380:CDS | 55.0% | |
! | TCCGGCAACTTTTCCGATGC+CGG | - | chr2.4:35680628-35680647 | None:intergenic | 55.0% |
! | TCCGGCATCGGAAAAGTTGC+CGG | + | chr2.4:35680624-35680643 | MS.gene64380:CDS | 55.0% |
!! | AAGATTGGTGGTGGTGGTGG+TGG | - | chr2.4:35680452-35680471 | None:intergenic | 55.0% |
ATGCAACGTGGTGTGCTGCG+AGG | + | chr2.4:35681370-35681389 | MS.gene64380:CDS | 60.0% | |
ATTCGCCTTTCGCGGCGTTG+CGG | + | chr2.4:35681016-35681035 | MS.gene64380:CDS | 60.0% | |
CCGAAGCCGCAATCAAAGGC+CGG | - | chr2.4:35681583-35681602 | None:intergenic | 60.0% | |
CCGGCCTTTGATTGCGGCTT+CGG | + | chr2.4:35681580-35681599 | MS.gene64380:CDS | 60.0% | |
CCTCCGTTTCTCCGGCTTAC+CGG | + | chr2.4:35680906-35680925 | MS.gene64380:CDS | 60.0% | |
CGTAGGGTAAAGAGGCCGTG+TGG | - | chr2.4:35680386-35680405 | None:intergenic | 60.0% | |
GACGGCCTCCTTGCCAATGT+CGG | + | chr2.4:35680192-35680211 | MS.gene64380:CDS | 60.0% | |
GCTCTTGCTCTTCGTCCTGG+CGG | + | chr2.4:35680882-35680901 | MS.gene64380:CDS | 60.0% | |
GTGCAAGTTCAGCGAGACGG+AGG | - | chr2.4:35680980-35680999 | None:intergenic | 60.0% | |
TGCAACGTGGTGTGCTGCGA+GGG | + | chr2.4:35681371-35681390 | MS.gene64380:CDS | 60.0% | |
! | CGAGACGGAGGCCGATTTCA+CGG | - | chr2.4:35680968-35680987 | None:intergenic | 60.0% |
!! | AAGGAGCGGCTCGGTAAAGC+CGG | + | chr2.4:35681434-35681453 | MS.gene64380:CDS | 60.0% |
!! | ATTGGTGGTGGTGGTGGTGG+TGG | - | chr2.4:35680449-35680468 | None:intergenic | 60.0% |
CCGGTAAGCCGGAGAAACGG+AGG | - | chr2.4:35680909-35680928 | None:intergenic | 65.0% | |
GCGGACCAATGCCGGTAAGC+CGG | - | chr2.4:35680920-35680939 | None:intergenic | 65.0% | |
TCACGGTCATCCAGCGACGG+CGG | - | chr2.4:35680939-35680958 | None:intergenic | 65.0% | |
! | CTGGCGGACCTCCGTTTCTC+CGG | + | chr2.4:35680898-35680917 | MS.gene64380:CDS | 65.0% |
! | GACGGAGGCCGATTTCACGG+AGG | - | chr2.4:35680965-35680984 | None:intergenic | 65.0% |
!! | AGGAGCGGCTCGGTAAAGCC+GGG | + | chr2.4:35681435-35681454 | MS.gene64380:CDS | 65.0% |
!! | TGGTGGTGGTGGTGGTGGTG+TGG | - | chr2.4:35680444-35680463 | None:intergenic | 65.0% |
!! | TGGTGGTGGTGGTGGTGTGG+CGG | - | chr2.4:35680441-35680460 | None:intergenic | 65.0% |
CAGCGACGGCGGACCAATGC+CGG | - | chr2.4:35680928-35680947 | None:intergenic | 70.0% | |
CGGAGAAACGGAGGTCCGCC+AGG | - | chr2.4:35680900-35680919 | None:intergenic | 70.0% | |
CGTGGTGTGCTGCGAGGGAC+CGG | + | chr2.4:35681376-35681395 | MS.gene64380:CDS | 70.0% | |
! | GGCGGCGGTGCTGAGAGATC+TGG | - | chr2.4:35680423-35680442 | None:intergenic | 70.0% |
!! | TGGTGGTGGTGGTGTGGCGG+CGG | - | chr2.4:35680438-35680457 | None:intergenic | 70.0% |
CCACGCCGCAACGCCGCGAA+AGG | - | chr2.4:35681024-35681043 | None:intergenic | 75.0% | |
CCTTTCGCGGCGTTGCGGCG+TGG | + | chr2.4:35681021-35681040 | MS.gene64380:CDS | 75.0% | |
TTCGCGGCGTTGCGGCGTGG+CGG | + | chr2.4:35681024-35681043 | MS.gene64380:CDS | 75.0% | |
!! | CGGCATTGGTCCGCCGTCGC+TGG | + | chr2.4:35680926-35680945 | MS.gene64380:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 35680144 | 35681655 | 35680144 | ID=MS.gene64380 |
chr2.4 | mRNA | 35680144 | 35681655 | 35680144 | ID=MS.gene64380.t1;Parent=MS.gene64380 |
chr2.4 | exon | 35680144 | 35681655 | 35680144 | ID=MS.gene64380.t1.exon1;Parent=MS.gene64380.t1 |
chr2.4 | CDS | 35680144 | 35681655 | 35680144 | ID=cds.MS.gene64380.t1;Parent=MS.gene64380.t1 |
Gene Sequence |
Protein sequence |