Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64527.t1 | XP_013448856.1 | 50 | 304 | 35 | 2 | 16 | 202 | 76 | 379 | 6.50E-63 | 250.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64527.t1 | P43293 | 32.2 | 311 | 94 | 2 | 16 | 209 | 71 | 381 | 5.8e-36 | 152.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64527.t1 | I3SLM4 | 50.0 | 304 | 35 | 2 | 16 | 202 | 76 | 379 | 4.7e-63 | 250.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64527.t1 | MTR_7g061660 | 83.019 | 106 | 18 | 0 | 97 | 202 | 274 | 379 | 2.51e-52 | 174 |
MS.gene64527.t1 | MTR_7g061660 | 63.208 | 106 | 28 | 1 | 6 | 100 | 66 | 171 | 2.23e-34 | 127 |
MS.gene64527.t1 | MTR_3g067780 | 43.169 | 183 | 82 | 3 | 17 | 187 | 63 | 235 | 9.12e-40 | 137 |
MS.gene64527.t1 | MTR_2g096950 | 47.664 | 107 | 50 | 1 | 97 | 197 | 275 | 381 | 1.45e-25 | 103 |
MS.gene64527.t1 | MTR_2g096950 | 53.125 | 96 | 34 | 1 | 16 | 100 | 77 | 172 | 1.89e-25 | 103 |
MS.gene64527.t1 | MTR_5g079840 | 40.559 | 143 | 67 | 2 | 97 | 221 | 276 | 418 | 4.15e-25 | 102 |
MS.gene64527.t1 | MTR_5g079840 | 51.042 | 96 | 36 | 1 | 16 | 100 | 78 | 173 | 1.03e-24 | 101 |
MS.gene64527.t1 | MTR_3g067795 | 53.191 | 94 | 33 | 1 | 18 | 100 | 1 | 94 | 4.59e-25 | 100 |
MS.gene64527.t1 | MTR_3g067795 | 45.556 | 90 | 49 | 0 | 97 | 186 | 197 | 286 | 1.00e-20 | 89.4 |
MS.gene64527.t1 | MTR_3g067795 | 53.191 | 94 | 33 | 1 | 18 | 100 | 1 | 94 | 5.07e-25 | 100 |
MS.gene64527.t1 | MTR_3g067795 | 45.556 | 90 | 49 | 0 | 97 | 186 | 197 | 286 | 1.39e-20 | 89.0 |
MS.gene64527.t1 | MTR_3g067795 | 52.083 | 96 | 35 | 1 | 16 | 100 | 79 | 174 | 5.89e-25 | 101 |
MS.gene64527.t1 | MTR_3g067795 | 45.556 | 90 | 49 | 0 | 97 | 186 | 277 | 366 | 2.13e-20 | 89.4 |
MS.gene64527.t1 | MTR_4g063940 | 54.255 | 94 | 32 | 1 | 16 | 98 | 98 | 191 | 6.13e-25 | 102 |
MS.gene64527.t1 | MTR_4g063940 | 47.674 | 86 | 45 | 0 | 97 | 182 | 294 | 379 | 8.92e-21 | 90.5 |
MS.gene64527.t1 | MTR_3g067795 | 52.083 | 96 | 35 | 1 | 16 | 100 | 79 | 174 | 7.49e-25 | 101 |
MS.gene64527.t1 | MTR_3g067795 | 45.556 | 90 | 49 | 0 | 97 | 186 | 277 | 366 | 2.93e-20 | 89.0 |
MS.gene64527.t1 | MTR_5g038870 | 52.083 | 96 | 35 | 1 | 16 | 100 | 79 | 174 | 1.92e-24 | 100 |
MS.gene64527.t1 | MTR_5g038870 | 41.000 | 100 | 51 | 1 | 100 | 199 | 278 | 369 | 1.68e-18 | 84.0 |
MS.gene64527.t1 | MTR_4g115120 | 51.020 | 98 | 37 | 1 | 16 | 102 | 114 | 211 | 2.67e-24 | 100 |
MS.gene64527.t1 | MTR_4g115120 | 43.333 | 90 | 51 | 0 | 97 | 186 | 309 | 398 | 4.67e-18 | 82.8 |
MS.gene64527.t1 | MTR_3g067770 | 50.000 | 96 | 37 | 1 | 16 | 100 | 72 | 167 | 8.69e-24 | 96.7 |
MS.gene64527.t1 | MTR_3g040800 | 49.495 | 99 | 39 | 1 | 15 | 102 | 110 | 208 | 2.53e-23 | 97.4 |
MS.gene64527.t1 | MTR_3g040800 | 40.426 | 94 | 55 | 1 | 97 | 189 | 307 | 400 | 6.42e-11 | 62.0 |
MS.gene64527.t1 | MTR_3g067770 | 50.000 | 96 | 37 | 1 | 16 | 100 | 72 | 167 | 3.61e-23 | 96.3 |
MS.gene64527.t1 | MTR_3g067770 | 40.000 | 85 | 51 | 0 | 97 | 181 | 269 | 353 | 6.96e-15 | 73.2 |
MS.gene64527.t1 | MTR_3g067770 | 51.064 | 94 | 35 | 1 | 18 | 100 | 1 | 94 | 3.68e-23 | 95.1 |
MS.gene64527.t1 | MTR_3g067770 | 40.000 | 85 | 51 | 0 | 97 | 181 | 196 | 280 | 3.23e-15 | 73.6 |
MS.gene64527.t1 | MTR_6g011330 | 47.368 | 114 | 49 | 1 | 16 | 118 | 136 | 249 | 6.53e-23 | 97.1 |
MS.gene64527.t1 | MTR_6g011330 | 42.222 | 90 | 52 | 0 | 97 | 186 | 332 | 421 | 8.16e-14 | 70.5 |
MS.gene64527.t1 | MTR_5g088400 | 49.495 | 99 | 39 | 1 | 15 | 102 | 72 | 170 | 9.31e-23 | 94.0 |
MS.gene64527.t1 | MTR_4g063930 | 52.128 | 94 | 34 | 1 | 16 | 98 | 177 | 270 | 9.85e-23 | 96.3 |
MS.gene64527.t1 | MTR_4g063930 | 48.864 | 88 | 45 | 0 | 97 | 184 | 373 | 460 | 4.60e-21 | 91.7 |
MS.gene64527.t1 | MTR_8g469230 | 47.368 | 114 | 49 | 1 | 16 | 118 | 135 | 248 | 1.39e-22 | 95.9 |
MS.gene64527.t1 | MTR_8g469230 | 44.444 | 90 | 50 | 0 | 97 | 186 | 331 | 420 | 6.01e-19 | 85.5 |
MS.gene64527.t1 | MTR_4g063935 | 55.435 | 92 | 30 | 1 | 18 | 98 | 98 | 189 | 1.63e-22 | 95.1 |
MS.gene64527.t1 | MTR_4g063935 | 47.368 | 95 | 47 | 1 | 100 | 194 | 295 | 386 | 9.35e-21 | 90.5 |
MS.gene64527.t1 | MTR_4g063935 | 55.435 | 92 | 30 | 1 | 18 | 98 | 118 | 209 | 1.70e-22 | 95.5 |
MS.gene64527.t1 | MTR_4g063935 | 47.368 | 95 | 47 | 1 | 100 | 194 | 315 | 406 | 1.12e-20 | 90.1 |
MS.gene64527.t1 | MTR_7g009320 | 45.614 | 114 | 51 | 1 | 16 | 118 | 126 | 239 | 1.90e-22 | 95.5 |
MS.gene64527.t1 | MTR_7g009320 | 45.556 | 90 | 49 | 0 | 97 | 186 | 322 | 411 | 7.75e-20 | 88.2 |
MS.gene64527.t1 | MTR_5g038450 | 47.368 | 114 | 49 | 1 | 16 | 118 | 139 | 252 | 2.67e-22 | 95.1 |
MS.gene64527.t1 | MTR_5g038450 | 44.444 | 90 | 50 | 0 | 97 | 186 | 335 | 424 | 8.06e-18 | 82.4 |
MS.gene64527.t1 | MTR_5g088400 | 49.495 | 99 | 39 | 1 | 15 | 102 | 72 | 170 | 2.88e-22 | 94.4 |
MS.gene64527.t1 | MTR_5g088400 | 36.364 | 99 | 55 | 2 | 116 | 206 | 289 | 387 | 1.15e-11 | 63.9 |
MS.gene64527.t1 | MTR_2g096970 | 47.917 | 96 | 39 | 1 | 16 | 100 | 64 | 159 | 4.09e-22 | 93.6 |
MS.gene64527.t1 | MTR_2g096970 | 50.588 | 85 | 41 | 1 | 97 | 181 | 263 | 346 | 3.79e-19 | 85.1 |
MS.gene64527.t1 | MTR_4g063945 | 50.000 | 88 | 44 | 0 | 97 | 184 | 289 | 376 | 1.50e-21 | 92.4 |
MS.gene64527.t1 | MTR_4g063945 | 53.571 | 84 | 28 | 1 | 26 | 98 | 103 | 186 | 8.65e-21 | 90.5 |
MS.gene64527.t1 | MTR_4g063945 | 50.000 | 88 | 44 | 0 | 97 | 184 | 291 | 378 | 1.61e-21 | 92.4 |
MS.gene64527.t1 | MTR_4g063945 | 53.571 | 84 | 28 | 1 | 26 | 98 | 105 | 188 | 9.20e-21 | 90.5 |
MS.gene64527.t1 | MTR_8g073560 | 46.809 | 94 | 39 | 1 | 18 | 100 | 97 | 190 | 2.86e-21 | 90.1 |
MS.gene64527.t1 | MTR_3g462840 | 47.917 | 96 | 39 | 1 | 16 | 100 | 67 | 162 | 3.16e-21 | 92.0 |
MS.gene64527.t1 | MTR_3g067775 | 48.454 | 97 | 39 | 1 | 16 | 101 | 64 | 160 | 7.23e-21 | 89.0 |
MS.gene64527.t1 | MTR_6g011570 | 47.917 | 96 | 39 | 1 | 16 | 100 | 70 | 165 | 9.57e-21 | 90.5 |
MS.gene64527.t1 | MTR_8g073560 | 46.809 | 94 | 39 | 1 | 18 | 100 | 83 | 176 | 1.12e-20 | 90.1 |
MS.gene64527.t1 | MTR_8g073560 | 35.455 | 110 | 64 | 1 | 97 | 206 | 279 | 381 | 6.87e-16 | 76.3 |
MS.gene64527.t1 | MTR_4g123480 | 45.556 | 90 | 49 | 0 | 97 | 186 | 104 | 193 | 2.26e-20 | 85.9 |
MS.gene64527.t1 | MTR_7g074610 | 48.936 | 94 | 34 | 2 | 18 | 100 | 96 | 186 | 1.00e-18 | 84.7 |
MS.gene64527.t1 | MTR_7g074610 | 40.230 | 87 | 52 | 0 | 97 | 183 | 287 | 373 | 1.59e-15 | 75.5 |
MS.gene64527.t1 | MTR_3g115490 | 44.681 | 94 | 41 | 1 | 18 | 100 | 87 | 180 | 1.27e-18 | 84.3 |
MS.gene64527.t1 | MTR_2g096960 | 46.667 | 90 | 37 | 1 | 22 | 100 | 80 | 169 | 2.18e-18 | 83.6 |
MS.gene64527.t1 | MTR_2g096960 | 49.412 | 85 | 42 | 1 | 97 | 181 | 277 | 360 | 2.89e-18 | 83.2 |
MS.gene64527.t1 | MTR_5g023980 | 41.667 | 96 | 45 | 1 | 16 | 100 | 94 | 189 | 9.44e-18 | 80.5 |
MS.gene64527.t1 | MTR_5g023980 | 41.667 | 96 | 45 | 1 | 16 | 100 | 80 | 175 | 1.49e-17 | 80.9 |
MS.gene64527.t1 | MTR_5g023980 | 35.849 | 106 | 63 | 4 | 97 | 199 | 278 | 381 | 7.26e-11 | 61.6 |
MS.gene64527.t1 | MTR_4g108270 | 41.489 | 94 | 44 | 1 | 16 | 98 | 88 | 181 | 2.66e-17 | 80.5 |
MS.gene64527.t1 | MTR_4g108270 | 41.176 | 85 | 49 | 1 | 97 | 181 | 285 | 368 | 1.35e-15 | 75.5 |
MS.gene64527.t1 | MTR_5g026370 | 41.111 | 90 | 53 | 0 | 97 | 186 | 287 | 376 | 5.07e-17 | 79.7 |
MS.gene64527.t1 | MTR_5g026370 | 41.071 | 112 | 52 | 2 | 18 | 118 | 97 | 205 | 1.07e-14 | 73.2 |
MS.gene64527.t1 | MTR_1g015020 | 42.742 | 124 | 52 | 3 | 18 | 125 | 87 | 207 | 1.65e-16 | 78.2 |
MS.gene64527.t1 | MTR_2g041960 | 40.000 | 90 | 54 | 0 | 97 | 186 | 275 | 364 | 5.48e-16 | 77.0 |
MS.gene64527.t1 | MTR_2g041960 | 42.553 | 94 | 40 | 2 | 19 | 101 | 85 | 175 | 3.29e-12 | 65.9 |
MS.gene64527.t1 | MTR_8g100155 | 39.785 | 93 | 55 | 1 | 97 | 189 | 268 | 359 | 5.63e-16 | 76.6 |
MS.gene64527.t1 | MTR_8g100155 | 43.299 | 97 | 41 | 2 | 18 | 103 | 76 | 169 | 6.30e-15 | 73.6 |
MS.gene64527.t1 | MTR_4g125260 | 42.222 | 90 | 52 | 0 | 97 | 186 | 281 | 370 | 8.31e-16 | 76.3 |
MS.gene64527.t1 | MTR_4g125260 | 35.088 | 114 | 56 | 3 | 2 | 100 | 70 | 180 | 1.29e-11 | 63.9 |
MS.gene64527.t1 | MTR_8g073700 | 35.455 | 110 | 64 | 1 | 97 | 206 | 168 | 270 | 1.05e-15 | 74.7 |
MS.gene64527.t1 | MTR_3g105320 | 39.370 | 127 | 58 | 3 | 15 | 125 | 84 | 207 | 8.42e-15 | 73.2 |
MS.gene64527.t1 | MTR_3g105320 | 36.667 | 90 | 57 | 0 | 97 | 186 | 279 | 368 | 2.77e-13 | 68.6 |
MS.gene64527.t1 | MTR_5g099130 | 41.489 | 94 | 39 | 2 | 16 | 98 | 97 | 185 | 8.71e-15 | 73.2 |
MS.gene64527.t1 | MTR_5g099130 | 36.047 | 86 | 55 | 0 | 97 | 182 | 290 | 375 | 4.58e-12 | 65.1 |
MS.gene64527.t1 | MTR_5g099130 | 41.489 | 94 | 39 | 2 | 16 | 98 | 108 | 196 | 1.06e-14 | 72.8 |
MS.gene64527.t1 | MTR_5g099130 | 36.047 | 86 | 55 | 0 | 97 | 182 | 301 | 386 | 5.35e-12 | 65.1 |
MS.gene64527.t1 | MTR_5g099130 | 41.489 | 94 | 39 | 2 | 16 | 98 | 104 | 192 | 1.18e-14 | 72.8 |
MS.gene64527.t1 | MTR_5g099130 | 36.047 | 86 | 55 | 0 | 97 | 182 | 297 | 382 | 5.26e-12 | 65.1 |
MS.gene64527.t1 | MTR_3g067765 | 41.584 | 101 | 45 | 2 | 11 | 100 | 28 | 125 | 1.41e-14 | 72.0 |
MS.gene64527.t1 | MTR_3g067765 | 40.000 | 85 | 51 | 0 | 97 | 181 | 223 | 307 | 1.42e-14 | 72.0 |
MS.gene64527.t1 | MTR_4g063950 | 37.805 | 82 | 51 | 0 | 97 | 178 | 288 | 369 | 6.08e-14 | 70.9 |
MS.gene64527.t1 | MTR_4g063950 | 39.130 | 92 | 50 | 2 | 18 | 103 | 97 | 188 | 2.01e-11 | 63.5 |
MS.gene64527.t1 | MTR_4g126970 | 40.426 | 94 | 43 | 2 | 15 | 97 | 125 | 216 | 5.23e-13 | 68.2 |
MS.gene64527.t1 | MTR_8g020920 | 40.000 | 100 | 46 | 2 | 15 | 103 | 81 | 177 | 8.73e-13 | 67.4 |
MS.gene64527.t1 | MTR_8g088410 | 37.647 | 85 | 53 | 0 | 97 | 181 | 269 | 353 | 1.08e-12 | 67.0 |
MS.gene64527.t1 | MTR_8g088410 | 40.164 | 122 | 59 | 4 | 18 | 125 | 77 | 198 | 1.31e-11 | 63.9 |
MS.gene64527.t1 | MTR_4g018790 | 32.258 | 93 | 63 | 0 | 97 | 189 | 365 | 457 | 2.48e-12 | 66.2 |
MS.gene64527.t1 | MTR_5g013610 | 38.095 | 84 | 52 | 0 | 97 | 180 | 263 | 346 | 5.83e-12 | 64.7 |
MS.gene64527.t1 | MTR_1g082580 | 36.585 | 82 | 52 | 0 | 97 | 178 | 343 | 424 | 1.20e-11 | 63.9 |
MS.gene64527.t1 | MTR_7g101800 | 35.632 | 87 | 56 | 0 | 97 | 183 | 294 | 380 | 1.27e-11 | 63.9 |
MS.gene64527.t1 | MTR_7g101800 | 35.632 | 87 | 56 | 0 | 97 | 183 | 286 | 372 | 1.32e-11 | 63.9 |
MS.gene64527.t1 | MTR_7g101800 | 35.632 | 87 | 56 | 0 | 97 | 183 | 306 | 392 | 1.43e-11 | 63.9 |
MS.gene64527.t1 | MTR_7g109670 | 33.721 | 86 | 57 | 0 | 97 | 182 | 574 | 659 | 1.53e-11 | 63.9 |
MS.gene64527.t1 | MTR_7g073230 | 34.483 | 87 | 57 | 0 | 97 | 183 | 364 | 450 | 2.61e-11 | 63.2 |
MS.gene64527.t1 | MTR_8g008820 | 31.915 | 94 | 64 | 0 | 97 | 190 | 276 | 369 | 2.72e-11 | 63.2 |
MS.gene64527.t1 | MTR_7g099220 | 31.633 | 98 | 65 | 1 | 97 | 194 | 524 | 619 | 3.72e-11 | 62.8 |
MS.gene64527.t1 | MTR_1g063910 | 33.333 | 87 | 58 | 0 | 97 | 183 | 289 | 375 | 4.95e-11 | 62.4 |
MS.gene64527.t1 | MTR_4g123490 | 59.184 | 49 | 20 | 0 | 55 | 103 | 31 | 79 | 5.14e-11 | 57.8 |
MS.gene64527.t1 | MTR_1g063910 | 33.333 | 87 | 58 | 0 | 97 | 183 | 298 | 384 | 5.15e-11 | 62.0 |
MS.gene64527.t1 | MTR_2g084120 | 35.366 | 82 | 53 | 0 | 97 | 178 | 289 | 370 | 9.60e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64527.t1 | AT2G28930 | 53.125 | 96 | 34 | 1 | 16 | 100 | 75 | 170 | 7.14e-26 | 104 |
MS.gene64527.t1 | AT2G28930 | 50.000 | 86 | 43 | 0 | 97 | 182 | 273 | 358 | 4.46e-20 | 88.6 |
MS.gene64527.t1 | AT2G28930 | 53.125 | 96 | 34 | 1 | 16 | 100 | 72 | 167 | 7.51e-26 | 104 |
MS.gene64527.t1 | AT2G28930 | 50.000 | 86 | 43 | 0 | 97 | 182 | 270 | 355 | 4.01e-20 | 88.6 |
MS.gene64527.t1 | AT5G02290 | 55.208 | 96 | 32 | 1 | 16 | 100 | 71 | 166 | 7.58e-26 | 104 |
MS.gene64527.t1 | AT5G02290 | 42.478 | 113 | 65 | 0 | 97 | 209 | 269 | 381 | 5.62e-25 | 101 |
MS.gene64527.t1 | AT5G02290 | 55.208 | 96 | 32 | 1 | 16 | 100 | 71 | 166 | 7.58e-26 | 104 |
MS.gene64527.t1 | AT5G02290 | 42.478 | 113 | 65 | 0 | 97 | 209 | 269 | 381 | 5.62e-25 | 101 |
MS.gene64527.t1 | AT2G28930 | 53.125 | 96 | 34 | 1 | 16 | 100 | 83 | 178 | 9.51e-26 | 104 |
MS.gene64527.t1 | AT2G28930 | 50.000 | 86 | 43 | 0 | 97 | 182 | 281 | 366 | 3.37e-20 | 89.0 |
MS.gene64527.t1 | AT2G39660 | 52.083 | 96 | 35 | 1 | 16 | 100 | 70 | 165 | 1.50e-24 | 100 |
MS.gene64527.t1 | AT2G39660 | 40.952 | 105 | 52 | 1 | 97 | 191 | 268 | 372 | 9.47e-19 | 84.7 |
MS.gene64527.t1 | AT3G01300 | 47.368 | 114 | 49 | 1 | 16 | 118 | 139 | 252 | 4.19e-24 | 100 |
MS.gene64527.t1 | AT3G01300 | 44.444 | 90 | 50 | 0 | 97 | 186 | 335 | 424 | 8.41e-19 | 85.1 |
MS.gene64527.t1 | AT5G15080 | 48.246 | 114 | 48 | 1 | 16 | 118 | 145 | 258 | 6.60e-24 | 99.8 |
MS.gene64527.t1 | AT5G15080 | 44.444 | 90 | 50 | 0 | 97 | 186 | 341 | 430 | 1.09e-19 | 87.8 |
MS.gene64527.t1 | AT3G28690 | 43.077 | 130 | 59 | 2 | 4 | 118 | 13 | 142 | 3.67e-23 | 96.7 |
MS.gene64527.t1 | AT3G28690 | 40.206 | 97 | 58 | 0 | 97 | 193 | 225 | 321 | 1.80e-17 | 80.9 |
MS.gene64527.t1 | AT3G28690 | 43.077 | 130 | 59 | 2 | 4 | 118 | 62 | 191 | 4.75e-23 | 97.1 |
MS.gene64527.t1 | AT3G28690 | 40.206 | 97 | 58 | 0 | 97 | 193 | 274 | 370 | 2.52e-17 | 80.5 |
MS.gene64527.t1 | AT3G28690 | 43.077 | 130 | 59 | 2 | 4 | 118 | 113 | 242 | 6.21e-23 | 97.1 |
MS.gene64527.t1 | AT3G28690 | 42.222 | 90 | 52 | 0 | 97 | 186 | 325 | 414 | 2.25e-17 | 80.9 |
MS.gene64527.t1 | AT1G07570 | 50.000 | 96 | 37 | 1 | 16 | 100 | 82 | 177 | 1.37e-22 | 95.5 |
MS.gene64527.t1 | AT1G07570 | 50.575 | 87 | 43 | 0 | 97 | 183 | 280 | 366 | 6.68e-21 | 90.9 |
MS.gene64527.t1 | AT1G07570 | 50.000 | 96 | 37 | 1 | 16 | 100 | 71 | 166 | 1.41e-22 | 95.5 |
MS.gene64527.t1 | AT1G07570 | 50.575 | 87 | 43 | 0 | 97 | 183 | 269 | 355 | 4.50e-21 | 91.3 |
MS.gene64527.t1 | AT1G07570 | 50.000 | 96 | 37 | 1 | 16 | 100 | 71 | 166 | 1.41e-22 | 95.5 |
MS.gene64527.t1 | AT1G07570 | 50.575 | 87 | 43 | 0 | 97 | 183 | 269 | 355 | 4.50e-21 | 91.3 |
MS.gene64527.t1 | AT1G07570 | 50.000 | 96 | 37 | 1 | 16 | 100 | 71 | 166 | 1.41e-22 | 95.5 |
MS.gene64527.t1 | AT1G07570 | 50.575 | 87 | 43 | 0 | 97 | 183 | 269 | 355 | 4.50e-21 | 91.3 |
MS.gene64527.t1 | AT2G02800 | 50.000 | 96 | 37 | 1 | 16 | 100 | 86 | 181 | 4.83e-22 | 94.0 |
MS.gene64527.t1 | AT2G02800 | 33.898 | 118 | 72 | 1 | 97 | 208 | 282 | 399 | 8.39e-16 | 76.3 |
MS.gene64527.t1 | AT2G02800 | 50.000 | 96 | 37 | 1 | 16 | 100 | 86 | 181 | 4.83e-22 | 94.0 |
MS.gene64527.t1 | AT2G02800 | 33.898 | 118 | 72 | 1 | 97 | 208 | 282 | 399 | 8.39e-16 | 76.3 |
MS.gene64527.t1 | AT1G07570 | 50.575 | 87 | 43 | 0 | 97 | 183 | 153 | 239 | 9.13e-22 | 91.7 |
MS.gene64527.t1 | AT1G14370 | 48.454 | 97 | 39 | 1 | 15 | 100 | 88 | 184 | 2.90e-21 | 92.0 |
MS.gene64527.t1 | AT1G14370 | 39.796 | 98 | 56 | 1 | 97 | 194 | 285 | 379 | 3.62e-16 | 77.4 |
MS.gene64527.t1 | AT3G55450 | 50.000 | 94 | 36 | 1 | 16 | 98 | 64 | 157 | 3.14e-21 | 91.7 |
MS.gene64527.t1 | AT3G55450 | 41.379 | 87 | 51 | 0 | 97 | 183 | 263 | 349 | 3.35e-18 | 82.8 |
MS.gene64527.t1 | AT3G55450 | 50.000 | 94 | 36 | 1 | 16 | 98 | 101 | 194 | 3.43e-21 | 91.7 |
MS.gene64527.t1 | AT3G55450 | 41.379 | 87 | 51 | 0 | 97 | 183 | 300 | 386 | 4.01e-18 | 82.8 |
MS.gene64527.t1 | AT5G01020 | 44.737 | 114 | 44 | 3 | 18 | 115 | 74 | 184 | 1.99e-19 | 86.7 |
MS.gene64527.t1 | AT5G01020 | 40.659 | 91 | 54 | 0 | 97 | 187 | 265 | 355 | 4.63e-16 | 77.0 |
MS.gene64527.t1 | AT1G26970 | 47.423 | 97 | 39 | 2 | 16 | 100 | 86 | 182 | 4.58e-19 | 85.5 |
MS.gene64527.t1 | AT1G26970 | 39.583 | 96 | 55 | 1 | 97 | 192 | 281 | 373 | 5.83e-15 | 73.9 |
MS.gene64527.t1 | AT1G76360 | 42.708 | 96 | 44 | 1 | 16 | 100 | 166 | 261 | 1.15e-18 | 84.7 |
MS.gene64527.t1 | AT1G76360 | 32.456 | 114 | 73 | 1 | 97 | 206 | 362 | 475 | 3.47e-11 | 62.8 |
MS.gene64527.t1 | AT1G69790 | 45.745 | 94 | 40 | 1 | 18 | 100 | 78 | 171 | 4.24e-18 | 82.4 |
MS.gene64527.t1 | AT1G69790 | 37.500 | 96 | 58 | 1 | 97 | 192 | 270 | 363 | 2.44e-15 | 74.7 |
MS.gene64527.t1 | AT1G69790 | 45.745 | 94 | 40 | 1 | 18 | 100 | 89 | 182 | 5.00e-18 | 82.4 |
MS.gene64527.t1 | AT1G69790 | 37.500 | 96 | 58 | 1 | 97 | 192 | 281 | 374 | 2.64e-15 | 74.7 |
MS.gene64527.t1 | AT2G17220 | 44.792 | 96 | 40 | 2 | 16 | 100 | 90 | 183 | 6.11e-17 | 79.3 |
MS.gene64527.t1 | AT2G17220 | 34.483 | 116 | 73 | 1 | 97 | 209 | 286 | 401 | 2.21e-15 | 75.1 |
MS.gene64527.t1 | AT2G17220 | 44.792 | 96 | 40 | 2 | 16 | 100 | 89 | 182 | 6.39e-17 | 79.3 |
MS.gene64527.t1 | AT2G17220 | 34.483 | 116 | 73 | 1 | 97 | 209 | 285 | 400 | 2.40e-15 | 74.7 |
MS.gene64527.t1 | AT2G07180 | 47.368 | 95 | 36 | 2 | 18 | 101 | 95 | 186 | 2.65e-16 | 77.8 |
MS.gene64527.t1 | AT2G07180 | 36.170 | 94 | 60 | 0 | 97 | 190 | 286 | 379 | 5.32e-14 | 71.2 |
MS.gene64527.t1 | AT2G07180 | 47.368 | 95 | 36 | 2 | 18 | 101 | 95 | 186 | 2.65e-16 | 77.8 |
MS.gene64527.t1 | AT2G07180 | 36.170 | 94 | 60 | 0 | 97 | 190 | 286 | 379 | 5.32e-14 | 71.2 |
MS.gene64527.t1 | AT4G35600 | 41.667 | 96 | 45 | 1 | 16 | 100 | 90 | 185 | 4.30e-16 | 77.0 |
MS.gene64527.t1 | AT4G35600 | 37.209 | 86 | 54 | 0 | 97 | 182 | 285 | 370 | 1.58e-11 | 63.9 |
MS.gene64527.t1 | AT4G35600 | 41.667 | 96 | 45 | 1 | 16 | 100 | 89 | 184 | 4.33e-16 | 77.0 |
MS.gene64527.t1 | AT4G35600 | 37.209 | 86 | 54 | 0 | 97 | 182 | 284 | 369 | 1.53e-11 | 63.9 |
MS.gene64527.t1 | AT2G28940 | 40.698 | 86 | 50 | 1 | 97 | 181 | 186 | 271 | 5.97e-16 | 76.3 |
MS.gene64527.t1 | AT2G28940 | 40.698 | 86 | 50 | 1 | 97 | 181 | 305 | 390 | 8.59e-16 | 76.3 |
MS.gene64527.t1 | AT1G26970 | 39.583 | 96 | 55 | 1 | 97 | 192 | 166 | 258 | 1.80e-15 | 74.3 |
MS.gene64527.t1 | AT2G26290 | 35.354 | 99 | 64 | 0 | 97 | 195 | 284 | 382 | 3.52e-14 | 71.6 |
MS.gene64527.t1 | AT2G26290 | 41.121 | 107 | 47 | 3 | 6 | 100 | 81 | 183 | 1.36e-11 | 63.9 |
MS.gene64527.t1 | AT5G56460 | 41.593 | 113 | 54 | 3 | 18 | 118 | 81 | 193 | 5.61e-14 | 70.9 |
MS.gene64527.t1 | AT5G56460 | 32.558 | 86 | 58 | 0 | 97 | 182 | 275 | 360 | 5.69e-11 | 62.0 |
MS.gene64527.t1 | AT1G61590 | 37.778 | 90 | 56 | 0 | 97 | 186 | 295 | 384 | 1.16e-13 | 70.1 |
MS.gene64527.t1 | AT1G61590 | 41.053 | 95 | 42 | 2 | 18 | 101 | 104 | 195 | 1.99e-13 | 69.3 |
MS.gene64527.t1 | AT5G35580 | 34.444 | 90 | 59 | 0 | 97 | 186 | 272 | 361 | 2.03e-13 | 69.3 |
MS.gene64527.t1 | AT5G35580 | 39.252 | 107 | 51 | 2 | 6 | 101 | 69 | 172 | 4.86e-12 | 65.5 |
MS.gene64527.t1 | AT1G72540 | 40.217 | 92 | 55 | 0 | 97 | 188 | 280 | 371 | 2.20e-13 | 69.3 |
MS.gene64527.t1 | AT1G72540 | 40.860 | 93 | 41 | 2 | 19 | 100 | 90 | 179 | 4.50e-12 | 65.5 |
MS.gene64527.t1 | AT5G35580 | 34.444 | 90 | 59 | 0 | 97 | 186 | 284 | 373 | 2.22e-13 | 69.3 |
MS.gene64527.t1 | AT5G35580 | 39.252 | 107 | 51 | 2 | 6 | 101 | 81 | 184 | 5.20e-12 | 65.5 |
MS.gene64527.t1 | AT2G05940 | 36.667 | 90 | 57 | 0 | 97 | 186 | 283 | 372 | 2.28e-13 | 69.3 |
MS.gene64527.t1 | AT2G05940 | 43.011 | 93 | 39 | 2 | 19 | 100 | 93 | 182 | 1.83e-11 | 63.5 |
MS.gene64527.t1 | AT5G03320 | 33.684 | 95 | 63 | 0 | 97 | 191 | 281 | 375 | 2.97e-13 | 68.9 |
MS.gene64527.t1 | AT5G03320 | 33.684 | 95 | 63 | 0 | 97 | 191 | 281 | 375 | 2.97e-13 | 68.9 |
MS.gene64527.t1 | AT3G09830 | 34.483 | 87 | 57 | 0 | 97 | 183 | 284 | 370 | 4.39e-13 | 68.2 |
MS.gene64527.t1 | AT3G09830 | 34.483 | 87 | 57 | 0 | 97 | 183 | 284 | 370 | 4.39e-13 | 68.2 |
MS.gene64527.t1 | AT3G09830 | 34.483 | 87 | 57 | 0 | 97 | 183 | 284 | 370 | 4.39e-13 | 68.2 |
MS.gene64527.t1 | AT1G76370 | 31.429 | 105 | 71 | 1 | 97 | 200 | 267 | 371 | 3.42e-12 | 65.5 |
MS.gene64527.t1 | AT2G39110 | 35.632 | 87 | 56 | 0 | 97 | 183 | 291 | 377 | 3.87e-12 | 65.5 |
MS.gene64527.t1 | AT2G39110 | 35.632 | 87 | 56 | 0 | 97 | 183 | 276 | 362 | 3.89e-12 | 65.5 |
MS.gene64527.t1 | AT1G61860 | 38.636 | 88 | 54 | 0 | 97 | 184 | 278 | 365 | 4.85e-12 | 65.1 |
MS.gene64527.t1 | AT1G74490 | 34.951 | 103 | 66 | 1 | 97 | 199 | 284 | 385 | 5.01e-12 | 65.1 |
MS.gene64527.t1 | AT1G74490 | 40.404 | 99 | 42 | 2 | 16 | 103 | 94 | 186 | 1.37e-11 | 63.9 |
MS.gene64527.t1 | AT2G20300 | 35.556 | 90 | 58 | 0 | 97 | 186 | 535 | 624 | 5.10e-12 | 65.5 |
MS.gene64527.t1 | AT1G20650 | 32.353 | 102 | 63 | 1 | 97 | 198 | 270 | 365 | 9.12e-12 | 64.3 |
MS.gene64527.t1 | AT5G13160 | 32.743 | 113 | 66 | 3 | 100 | 202 | 282 | 394 | 1.64e-11 | 63.9 |
MS.gene64527.t1 | AT5G47070 | 34.783 | 92 | 60 | 0 | 97 | 188 | 284 | 375 | 3.10e-11 | 62.8 |
MS.gene64527.t1 | AT4G02010 | 33.721 | 86 | 57 | 0 | 97 | 182 | 574 | 659 | 9.69e-11 | 61.6 |
Find 63 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATGGCAGGTTCATGTTTA+TGG | 0.127622 | 7.3:+43865081 | None:intergenic |
TTCATGTGAATTTGGTATTA+AGG | 0.186066 | 7.3:-43866597 | MS.gene64527:CDS |
TTCACAACCTCGTCCATATT+TGG | 0.196476 | 7.3:+43864896 | None:intergenic |
CGTAAGAGTTCATGTGAATT+TGG | 0.203867 | 7.3:-43866605 | MS.gene64527:CDS |
ACAACAGTAATACCTATTTC+TGG | 0.230350 | 7.3:+43866496 | None:intergenic |
GTCTTAGAGGAAGGTGGTTT+TGG | 0.257310 | 7.3:-43866568 | MS.gene64527:CDS |
TGAGGATGATCATTGGCTTC+TGG | 0.286961 | 7.3:-43866090 | MS.gene64527:CDS |
GCCTAGGATCAGGCCAAATA+TGG | 0.308798 | 7.3:-43864909 | MS.gene64527:CDS |
TAGATAACATAAGTATGATT+TGG | 0.317410 | 7.3:-43866633 | None:intergenic |
CCTTTCTTCTGAGTGTCCTT+TGG | 0.323156 | 7.3:+43864851 | None:intergenic |
GAAAACTTTGGAGCAGCTTC+AGG | 0.327066 | 7.3:-43864876 | MS.gene64527:CDS |
GCTGCAACCAAACCAGAAAT+AGG | 0.354971 | 7.3:-43866508 | MS.gene64527:CDS |
TCTATTAATTTGACAAGATT+CGG | 0.355312 | 7.3:+43866122 | None:intergenic |
CTGTTGTTGTGAAGAGGCTT+AGG | 0.356927 | 7.3:-43866480 | MS.gene64527:CDS |
AGTAATACCTATTTCTGGTT+TGG | 0.372137 | 7.3:+43866501 | None:intergenic |
CGGATGCTTGTGGCCGAGGT+TGG | 0.372248 | 7.3:+43864805 | None:intergenic |
ATTAAGGGAAGGTGTCTTAG+AGG | 0.373503 | 7.3:-43866581 | MS.gene64527:CDS |
TCATGTGAATTTGGTATTAA+GGG | 0.380087 | 7.3:-43866596 | MS.gene64527:CDS |
TTCGACTAGTTTGTGTTCTC+CGG | 0.391896 | 7.3:+43865060 | None:intergenic |
AAACTCGTTGTTTGTTGGAT+AGG | 0.410273 | 7.3:+43865023 | None:intergenic |
TTTCCGGATGCTTGTGGCCG+AGG | 0.410750 | 7.3:+43864801 | None:intergenic |
GAAGCAAGGGCGGTAGCAAC+AGG | 0.439257 | 7.3:+43864950 | None:intergenic |
TTTGTTGGATAGGTAAGGCT+TGG | 0.455043 | 7.3:+43865033 | None:intergenic |
CGTTGTTTGTTGGATAGGTA+AGG | 0.460699 | 7.3:+43865028 | None:intergenic |
AGGAGAGAAGCAGACGGTCT+AGG | 0.460743 | 7.3:+43864741 | None:intergenic |
CGGCCACAAGCATCCGGAAA+AGG | 0.462530 | 7.3:-43864798 | MS.gene64527:CDS |
ATCAATCCAGCCTTTGAAAA+CGG | 0.468682 | 7.3:+43866543 | None:intergenic |
GTTTGTGTTCTCCGGATGGC+AGG | 0.481436 | 7.3:+43865068 | None:intergenic |
TCCATATTTGGCCTGATCCT+AGG | 0.487988 | 7.3:+43864908 | None:intergenic |
TGTTGTTGTGAAGAGGCTTA+GGG | 0.493104 | 7.3:-43866479 | MS.gene64527:intron |
CAGGCTGAAATCAACAATCT+CGG | 0.494645 | 7.3:-43866158 | MS.gene64527:CDS |
CAACCTCGGCCACAAGCATC+CGG | 0.495282 | 7.3:-43864804 | MS.gene64527:CDS |
AGGGAAGGTGTCTTAGAGGA+AGG | 0.506193 | 7.3:-43866577 | MS.gene64527:CDS |
GGACGAGGTTGTGAAAACTT+TGG | 0.506295 | 7.3:-43864888 | MS.gene64527:CDS |
AGGCTGAAATCAACAATCTC+GGG | 0.511018 | 7.3:-43866157 | MS.gene64527:CDS |
TTACTGTAGAGCCTAGGATC+AGG | 0.522053 | 7.3:-43864919 | MS.gene64527:CDS |
AGCATCCGGAAAAGGTAATA+CGG | 0.524997 | 7.3:-43864790 | MS.gene64527:CDS |
AGAACACAAACTAGTCGAAT+GGG | 0.526453 | 7.3:-43865056 | MS.gene64527:CDS |
GAAGGTGTCTTAGAGGAAGG+TGG | 0.538486 | 7.3:-43866574 | MS.gene64527:CDS |
GTGAATTTGGTATTAAGGGA+AGG | 0.539749 | 7.3:-43866592 | MS.gene64527:CDS |
TGATCCTAGGCTCTACAGTA+AGG | 0.545160 | 7.3:+43864921 | None:intergenic |
GTATTACTGTTGTTGTGAAG+AGG | 0.548081 | 7.3:-43866486 | MS.gene64527:CDS |
CCAAAGGACACTCAGAAGAA+AGG | 0.555416 | 7.3:-43864851 | MS.gene64527:CDS |
GGGCGGTAGCAACAGGAGCT+CGG | 0.557555 | 7.3:+43864957 | None:intergenic |
ACTAGTTTGTGTTCTCCGGA+TGG | 0.559887 | 7.3:+43865064 | None:intergenic |
GGTTTACGAGGTTATGCTGA+AGG | 0.564153 | 7.3:-43866069 | MS.gene64527:CDS |
ATAAACATGAACCTGCCATC+CGG | 0.564551 | 7.3:-43865079 | MS.gene64527:CDS |
GAGAACACAAACTAGTCGAA+TGG | 0.568745 | 7.3:-43865057 | MS.gene64527:CDS |
CGAGGTTGGAATTGCGTGCA+CGG | 0.569790 | 7.3:+43864819 | None:intergenic |
TAATACGGATGCTACTAGAA+AGG | 0.570907 | 7.3:-43864775 | MS.gene64527:CDS |
GTGATAGATCCACGACTCAA+AGG | 0.571060 | 7.3:-43864995 | MS.gene64527:CDS |
TACGAGGTTATGCTGAAGGA+AGG | 0.579364 | 7.3:-43866065 | MS.gene64527:CDS |
CAGTAAGGCATTGTGAAGCA+AGG | 0.584520 | 7.3:+43864936 | None:intergenic |
GGAGCAGCTTCAGGAACCAA+AGG | 0.609654 | 7.3:-43864867 | MS.gene64527:CDS |
CGTGCACGCAATTCCAACCT+CGG | 0.611369 | 7.3:-43864818 | MS.gene64527:CDS |
GGTTATGCTGAAGGAAGGCA+TGG | 0.613077 | 7.3:-43866060 | MS.gene64527:CDS |
AGTAAGGCATTGTGAAGCAA+GGG | 0.614529 | 7.3:+43864937 | None:intergenic |
GAATATAGACCTTTGAGTCG+TGG | 0.621553 | 7.3:+43864986 | None:intergenic |
AATGCCTTACTGTAGAGCCT+AGG | 0.639582 | 7.3:-43864925 | MS.gene64527:CDS |
TCATTGGCTTCTGGTTTACG+AGG | 0.658659 | 7.3:-43866081 | MS.gene64527:CDS |
GATCAGGCCAAATATGGACG+AGG | 0.662688 | 7.3:-43864903 | MS.gene64527:CDS |
AAGGCATTGTGAAGCAAGGG+CGG | 0.671185 | 7.3:+43864940 | None:intergenic |
ACATGAAGGAGAGAAGCAGA+CGG | 0.719912 | 7.3:+43864735 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAATATTGAAAACTATAA+AGG | + | chr7.3:43866120-43866139 | None:intergenic | 10.0% |
!! | AATTAAAGGAAATTAGTATT+GGG | + | chr7.3:43866044-43866063 | None:intergenic | 15.0% |
!! | AATTAGAACATACTATTTAA+CGG | + | chr7.3:43865382-43865401 | None:intergenic | 15.0% |
!! | TAATATGTTAATAAGATCAA+AGG | + | chr7.3:43865036-43865055 | None:intergenic | 15.0% |
!! | TGTTCAAATTTATCAATTAA+AGG | + | chr7.3:43866058-43866077 | None:intergenic | 15.0% |
!! | AAGTTATGATATATGACTTT+AGG | + | chr7.3:43865532-43865551 | None:intergenic | 20.0% |
!! | ATTAAAGGAAATTAGTATTG+GGG | + | chr7.3:43866043-43866062 | None:intergenic | 20.0% |
!! | CAATTAAAGGAAATTAGTAT+TGG | + | chr7.3:43866045-43866064 | None:intergenic | 20.0% |
!! | TCAATATTAATGAGAAAAGA+AGG | - | chr7.3:43866129-43866148 | MS.gene64527:CDS | 20.0% |
!!! | AAAAAAGTATTCTCTGAATT+TGG | + | chr7.3:43865884-43865903 | None:intergenic | 20.0% |
!!! | ATTAATAGAATACTGTTTTG+AGG | - | chr7.3:43865217-43865236 | MS.gene64527:intron | 20.0% |
!!! | TCTATTAATTTGACAAGATT+CGG | + | chr7.3:43865206-43865225 | None:intergenic | 20.0% |
!!! | TTCAGAGAATACTTTTTTTA+TGG | - | chr7.3:43865886-43865905 | MS.gene64527:intron | 20.0% |
! | AAAACTATTTACATCACTCT+TGG | + | chr7.3:43866187-43866206 | None:intergenic | 25.0% |
! | ATAAAAAACTCGTTGTTTGT+TGG | + | chr7.3:43866310-43866329 | None:intergenic | 25.0% |
! | CATCAAATTCAACCATAAAA+AGG | + | chr7.3:43865612-43865631 | None:intergenic | 25.0% |
! | TAAATCCGAAAAACTACATT+AGG | + | chr7.3:43865828-43865847 | None:intergenic | 25.0% |
! | TAACAGATATTTATCAGCTA+TGG | - | chr7.3:43865785-43865804 | MS.gene64527:intron | 25.0% |
! | TCATGTGAATTTGGTATTAA+GGG | - | chr7.3:43864729-43864748 | MS.gene64527:CDS | 25.0% |
! | TTCATGTGAATTTGGTATTA+AGG | - | chr7.3:43864728-43864747 | MS.gene64527:CDS | 25.0% |
! | TTGTCTAGAAACAAAATTCT+AGG | - | chr7.3:43864969-43864988 | MS.gene64527:CDS | 25.0% |
! | TTTGCAAAACTTTCTGATTT+CGG | - | chr7.3:43865673-43865692 | MS.gene64527:intron | 25.0% |
!! | AAGAGTGATGTAAATAGTTT+TGG | - | chr7.3:43866186-43866205 | MS.gene64527:intron | 25.0% |
!! | AGTTTATTAGCTGAAACTTT+TGG | + | chr7.3:43865853-43865872 | None:intergenic | 25.0% |
!! | CTTTTTATGGTTGAATTTGA+TGG | - | chr7.3:43865610-43865629 | MS.gene64527:intron | 25.0% |
!! | GTATTCCTAATGTAGTTTTT+CGG | - | chr7.3:43865820-43865839 | MS.gene64527:intron | 25.0% |
!! | TTAAAGGAAATTAGTATTGG+GGG | + | chr7.3:43866042-43866061 | None:intergenic | 25.0% |
!! | TTGATTATTGAACTTGTTTC+TGG | - | chr7.3:43865642-43865661 | MS.gene64527:intron | 25.0% |
!!! | TATAGTGGAAATTTTTTGCA+AGG | + | chr7.3:43865351-43865370 | None:intergenic | 25.0% |
AAGTGAACCGTTAAAGTTAT+CGG | + | chr7.3:43865069-43865088 | None:intergenic | 30.0% | |
ACAACAGTAATACCTATTTC+TGG | + | chr7.3:43864832-43864851 | None:intergenic | 30.0% | |
ACACAACTTCAACTTTAGTA+TGG | - | chr7.3:43865586-43865605 | MS.gene64527:intron | 30.0% | |
ATAAAAGTCATGTCTCTACT+CGG | - | chr7.3:43865722-43865741 | MS.gene64527:intron | 30.0% | |
ATAACTTTAACGGTTCACTT+TGG | - | chr7.3:43865069-43865088 | MS.gene64527:CDS | 30.0% | |
ATTATCGTCTTTAATGCATG+AGG | - | chr7.3:43865418-43865437 | MS.gene64527:intron | 30.0% | |
CACAAAAAACTCAAACATGA+AGG | + | chr7.3:43866607-43866626 | None:intergenic | 30.0% | |
GAACATTAACTAGTAGACAT+TGG | + | chr7.3:43865124-43865143 | None:intergenic | 30.0% | |
TTAACGGTTCACTATTATAG+TGG | + | chr7.3:43865366-43865385 | None:intergenic | 30.0% | |
TTGCAAAACTTTCTGATTTC+GGG | - | chr7.3:43865674-43865693 | MS.gene64527:intron | 30.0% | |
! | ACTTTAGTATGGCCTTTTTA+TGG | - | chr7.3:43865597-43865616 | MS.gene64527:intron | 30.0% |
! | GAACTAAGATTTAAAGCAGA+AGG | + | chr7.3:43864948-43864967 | None:intergenic | 30.0% |
! | TAAAGGAAATTAGTATTGGG+GGG | + | chr7.3:43866041-43866060 | None:intergenic | 30.0% |
!! | AGTAATACCTATTTCTGGTT+TGG | + | chr7.3:43864827-43864846 | None:intergenic | 30.0% |
!! | CTTATTTTCAACCATTCACT+TGG | - | chr7.3:43865443-43865462 | MS.gene64527:intron | 30.0% |
!! | TATTGAACTTGTTTCTGGTT+TGG | - | chr7.3:43865647-43865666 | MS.gene64527:intron | 30.0% |
AGAACACAAACTAGTCGAAT+GGG | - | chr7.3:43866269-43866288 | MS.gene64527:intron | 35.0% | |
AGTGAACCGTTAAAGTTATC+GGG | + | chr7.3:43865068-43865087 | None:intergenic | 35.0% | |
CGTAAGAGTTCATGTGAATT+TGG | - | chr7.3:43864720-43864739 | MS.gene64527:CDS | 35.0% | |
GTATTACTGTTGTTGTGAAG+AGG | - | chr7.3:43864839-43864858 | MS.gene64527:CDS | 35.0% | |
GTGAATTTGGTATTAAGGGA+AGG | - | chr7.3:43864733-43864752 | MS.gene64527:CDS | 35.0% | |
TAAAAGTCATGTCTCTACTC+GGG | - | chr7.3:43865723-43865742 | MS.gene64527:intron | 35.0% | |
TAATACGGATGCTACTAGAA+AGG | - | chr7.3:43866550-43866569 | MS.gene64527:CDS | 35.0% | |
TGCAAAACTTTCTGATTTCG+GGG | - | chr7.3:43865675-43865694 | MS.gene64527:intron | 35.0% | |
TTGCGAATGAAAATATCCCT+CGG | - | chr7.3:43865469-43865488 | MS.gene64527:intron | 35.0% | |
! | AAACTCGTTGTTTGTTGGAT+AGG | + | chr7.3:43866305-43866324 | None:intergenic | 35.0% |
! | ACATGACTTTTATCACCAAC+TGG | + | chr7.3:43865715-43865734 | None:intergenic | 35.0% |
! | ATCAATCCAGCCTTTGAAAA+CGG | + | chr7.3:43864785-43864804 | None:intergenic | 35.0% |
! | TGACTTTAGGTTCTCTACTA+TGG | + | chr7.3:43865519-43865538 | None:intergenic | 35.0% |
!! | GATTAGCATTGATTCGTCTT+GGG | - | chr7.3:43864884-43864903 | MS.gene64527:CDS | 35.0% |
!! | TCTTCATGTTTTGTGTCGTT+TGG | - | chr7.3:43865142-43865161 | MS.gene64527:intron | 35.0% |
!! | TGATTAGCATTGATTCGTCT+TGG | - | chr7.3:43864883-43864902 | MS.gene64527:CDS | 35.0% |
!!! | ACTGTTTTGAGGATGATCAT+TGG | - | chr7.3:43865228-43865247 | MS.gene64527:intron | 35.0% |
!!! | TGTTTGAGTTTTTTGTGACG+CGG | - | chr7.3:43866610-43866629 | MS.gene64527:CDS | 35.0% |
AAAACTTTCTGATTTCGGGG+TGG | - | chr7.3:43865678-43865697 | MS.gene64527:intron | 40.0% | |
AGCATCCGGAAAAGGTAATA+CGG | - | chr7.3:43866535-43866554 | MS.gene64527:CDS | 40.0% | |
AGGCTGAAATCAACAATCTC+GGG | - | chr7.3:43865168-43865187 | MS.gene64527:intron | 40.0% | |
ATAAACATGAACCTGCCATC+CGG | - | chr7.3:43866246-43866265 | MS.gene64527:intron | 40.0% | |
ATTCGCAAACTCCAAGTGAA+TGG | + | chr7.3:43865457-43865476 | None:intergenic | 40.0% | |
CAGGCTGAAATCAACAATCT+CGG | - | chr7.3:43865167-43865186 | MS.gene64527:intron | 40.0% | |
CCGAAACCCGATAACTTTAA+CGG | - | chr7.3:43865059-43865078 | MS.gene64527:CDS | 40.0% | |
CCGTTAAAGTTATCGGGTTT+CGG | + | chr7.3:43865062-43865081 | None:intergenic | 40.0% | |
CTTTAACGGTTCACTTTGGA+TGG | - | chr7.3:43865073-43865092 | MS.gene64527:CDS | 40.0% | |
GAATATAGACCTTTGAGTCG+TGG | + | chr7.3:43866342-43866361 | None:intergenic | 40.0% | |
GAGAACACAAACTAGTCGAA+TGG | - | chr7.3:43866268-43866287 | MS.gene64527:intron | 40.0% | |
TGCGAATGAAAATATCCCTC+GGG | - | chr7.3:43865470-43865489 | MS.gene64527:intron | 40.0% | |
TGTTGTTGTGAAGAGGCTTA+GGG | - | chr7.3:43864846-43864865 | MS.gene64527:CDS | 40.0% | |
TTCACAACCTCGTCCATATT+TGG | + | chr7.3:43866432-43866451 | None:intergenic | 40.0% | |
TTTGTTGGATAGGTAAGGCT+TGG | + | chr7.3:43866295-43866314 | None:intergenic | 40.0% | |
! | AGCATCCGTATTACCTTTTC+CGG | + | chr7.3:43866543-43866562 | None:intergenic | 40.0% |
! | CGTTGTTTGTTGGATAGGTA+AGG | + | chr7.3:43866300-43866319 | None:intergenic | 40.0% |
! | TTAGTATTGGGGGGAAATCT+TGG | + | chr7.3:43866032-43866051 | None:intergenic | 40.0% |
!! | AGTAAGGCATTGTGAAGCAA+GGG | + | chr7.3:43866391-43866410 | None:intergenic | 40.0% |
!! | ATTAAGGGAAGGTGTCTTAG+AGG | - | chr7.3:43864744-43864763 | MS.gene64527:CDS | 40.0% |
!! | GCTAGTGCTCTGAATTTTCA+AGG | - | chr7.3:43865986-43866005 | MS.gene64527:intron | 40.0% |
!! | TTCGACTAGTTTGTGTTCTC+CGG | + | chr7.3:43866268-43866287 | None:intergenic | 40.0% |
!!! | GGTTTTGGTTCCGTTTTCAA+AGG | - | chr7.3:43864772-43864791 | MS.gene64527:CDS | 40.0% |
!!! | TGTTTTGTGTCGTTTGGTTC+AGG | - | chr7.3:43865148-43865167 | MS.gene64527:intron | 40.0% |
AATGCCTTACTGTAGAGCCT+AGG | - | chr7.3:43866400-43866419 | MS.gene64527:intron | 45.0% | |
ACATGAAGGAGAGAAGCAGA+CGG | + | chr7.3:43866593-43866612 | None:intergenic | 45.0% | |
AGGCTTAGGGTCACAAAGAA+TGG | - | chr7.3:43864859-43864878 | MS.gene64527:CDS | 45.0% | |
CATCACTCTTGGCAGTAAGA+TGG | + | chr7.3:43866176-43866195 | None:intergenic | 45.0% | |
CCAAAGGACACTCAGAAGAA+AGG | - | chr7.3:43866474-43866493 | MS.gene64527:intron | 45.0% | |
CCTTTCTTCTGAGTGTCCTT+TGG | + | chr7.3:43866477-43866496 | None:intergenic | 45.0% | |
CTGTTGTTGTGAAGAGGCTT+AGG | - | chr7.3:43864845-43864864 | MS.gene64527:CDS | 45.0% | |
GCTGCAACCAAACCAGAAAT+AGG | - | chr7.3:43864817-43864836 | MS.gene64527:CDS | 45.0% | |
GGACGAGGTTGTGAAAACTT+TGG | - | chr7.3:43866437-43866456 | MS.gene64527:intron | 45.0% | |
GGATGGCAGGTTCATGTTTA+TGG | + | chr7.3:43866247-43866266 | None:intergenic | 45.0% | |
GGTTTACGAGGTTATGCTGA+AGG | - | chr7.3:43865256-43865275 | MS.gene64527:intron | 45.0% | |
GTGATAGATCCACGACTCAA+AGG | - | chr7.3:43866330-43866349 | MS.gene64527:intron | 45.0% | |
TACGAGGTTATGCTGAAGGA+AGG | - | chr7.3:43865260-43865279 | MS.gene64527:intron | 45.0% | |
TCCATATTTGGCCTGATCCT+AGG | + | chr7.3:43866420-43866439 | None:intergenic | 45.0% | |
TGATCCTAGGCTCTACAGTA+AGG | + | chr7.3:43866407-43866426 | None:intergenic | 45.0% | |
TTACTGTAGAGCCTAGGATC+AGG | - | chr7.3:43866406-43866425 | MS.gene64527:intron | 45.0% | |
! | ACTAGTTTGTGTTCTCCGGA+TGG | + | chr7.3:43866264-43866283 | None:intergenic | 45.0% |
! | GTCTTAGAGGAAGGTGGTTT+TGG | - | chr7.3:43864757-43864776 | MS.gene64527:CDS | 45.0% |
! | TTACCTTTTCCGGATGCTTG+TGG | + | chr7.3:43866533-43866552 | None:intergenic | 45.0% |
! | TTGGTTCCGTTTTCAAAGGC+TGG | - | chr7.3:43864776-43864795 | MS.gene64527:CDS | 45.0% |
!! | CAGTAAGGCATTGTGAAGCA+AGG | + | chr7.3:43866392-43866411 | None:intergenic | 45.0% |
!! | GAAAACTTTGGAGCAGCTTC+AGG | - | chr7.3:43866449-43866468 | MS.gene64527:intron | 45.0% |
!! | TCATTGGCTTCTGGTTTACG+AGG | - | chr7.3:43865244-43865263 | MS.gene64527:intron | 45.0% |
!! | TGAGGATGATCATTGGCTTC+TGG | - | chr7.3:43865235-43865254 | MS.gene64527:intron | 45.0% |
ATATCCCTCGGGACTGCAAA+AGG | - | chr7.3:43865481-43865500 | MS.gene64527:intron | 50.0% | |
ATCACCAACTGGTCCATCTC+TGG | + | chr7.3:43865704-43865723 | None:intergenic | 50.0% | |
CATGTCTCTACTCGGGTCAT+GGG | - | chr7.3:43865730-43865749 | MS.gene64527:intron | 50.0% | |
CTCTAGTGCTGCATATCCAC+CGG | + | chr7.3:43865758-43865777 | None:intergenic | 50.0% | |
GATCAGGCCAAATATGGACG+AGG | - | chr7.3:43866422-43866441 | MS.gene64527:intron | 50.0% | |
GCCTAGGATCAGGCCAAATA+TGG | - | chr7.3:43866416-43866435 | MS.gene64527:intron | 50.0% | |
GGTTATGCTGAAGGAAGGCA+TGG | - | chr7.3:43865265-43865284 | MS.gene64527:intron | 50.0% | |
TCATGTCTCTACTCGGGTCA+TGG | - | chr7.3:43865729-43865748 | MS.gene64527:intron | 50.0% | |
! | AACACCTTTTGCAGTCCCGA+GGG | + | chr7.3:43865488-43865507 | None:intergenic | 50.0% |
!! | AAGGCATTGTGAAGCAAGGG+CGG | + | chr7.3:43866388-43866407 | None:intergenic | 50.0% |
!! | AGGGAAGGTGTCTTAGAGGA+AGG | - | chr7.3:43864748-43864767 | MS.gene64527:CDS | 50.0% |
!! | GAAGGTGTCTTAGAGGAAGG+TGG | - | chr7.3:43864751-43864770 | MS.gene64527:CDS | 50.0% |
AGGAGAGAAGCAGACGGTCT+AGG | + | chr7.3:43866587-43866606 | None:intergenic | 55.0% | |
CGAGGTTGGAATTGCGTGCA+CGG | + | chr7.3:43866509-43866528 | None:intergenic | 55.0% | |
CGTGCACGCAATTCCAACCT+CGG | - | chr7.3:43866507-43866526 | MS.gene64527:CDS | 55.0% | |
GGAGCAGCTTCAGGAACCAA+AGG | - | chr7.3:43866458-43866477 | MS.gene64527:intron | 55.0% | |
GTTTGTGTTCTCCGGATGGC+AGG | + | chr7.3:43866260-43866279 | None:intergenic | 55.0% | |
TCTACTCGGGTCATGGGAAC+CGG | - | chr7.3:43865736-43865755 | MS.gene64527:intron | 55.0% | |
! | GAACACCTTTTGCAGTCCCG+AGG | + | chr7.3:43865489-43865508 | None:intergenic | 55.0% |
CAACCTCGGCCACAAGCATC+CGG | - | chr7.3:43866521-43866540 | MS.gene64527:CDS | 60.0% | |
CGGCCACAAGCATCCGGAAA+AGG | - | chr7.3:43866527-43866546 | MS.gene64527:CDS | 60.0% | |
GAAGCAAGGGCGGTAGCAAC+AGG | + | chr7.3:43866378-43866397 | None:intergenic | 60.0% | |
GATTTCGGGGTGGCCAGAGA+TGG | - | chr7.3:43865688-43865707 | MS.gene64527:intron | 60.0% | |
GTGGCCAGAGATGGACCAGT+TGG | - | chr7.3:43865697-43865716 | MS.gene64527:intron | 60.0% | |
TTTCCGGATGCTTGTGGCCG+AGG | + | chr7.3:43866527-43866546 | None:intergenic | 60.0% | |
ACTCGGGTCATGGGAACCGG+TGG | - | chr7.3:43865739-43865758 | MS.gene64527:intron | 65.0% | |
CGGATGCTTGTGGCCGAGGT+TGG | + | chr7.3:43866523-43866542 | None:intergenic | 65.0% | |
GGGCGGTAGCAACAGGAGCT+CGG | + | chr7.3:43866371-43866390 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 43864706 | 43866641 | 43864706 | ID=MS.gene64527 |
chr7.3 | mRNA | 43864706 | 43866641 | 43864706 | ID=MS.gene64527.t1;Parent=MS.gene64527 |
chr7.3 | exon | 43866480 | 43866641 | 43866480 | ID=MS.gene64527.t1.exon1;Parent=MS.gene64527.t1 |
chr7.3 | CDS | 43866480 | 43866641 | 43866480 | ID=cds.MS.gene64527.t1;Parent=MS.gene64527.t1 |
chr7.3 | exon | 43866042 | 43866177 | 43866042 | ID=MS.gene64527.t1.exon2;Parent=MS.gene64527.t1 |
chr7.3 | CDS | 43866042 | 43866177 | 43866042 | ID=cds.MS.gene64527.t1;Parent=MS.gene64527.t1 |
chr7.3 | exon | 43864706 | 43865124 | 43864706 | ID=MS.gene64527.t1.exon3;Parent=MS.gene64527.t1 |
chr7.3 | CDS | 43864706 | 43865124 | 43864706 | ID=cds.MS.gene64527.t1;Parent=MS.gene64527.t1 |
Gene Sequence |
Protein sequence |