Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64582.t1 | KEH22833.1 | 92.1 | 777 | 54 | 3 | 1 | 777 | 1 | 770 | 0.00E+00 | 1179.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64582.t1 | Q01593 | 43.7 | 773 | 315 | 19 | 19 | 763 | 32 | 712 | 3.0e-81 | 304.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64582.t1 | A0A072U0Z8 | 92.1 | 777 | 54 | 3 | 1 | 777 | 1 | 770 | 0.0e+00 | 1179.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene64582.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64582.t1 | MTR_7g059330 | 96.139 | 777 | 23 | 3 | 1 | 777 | 1 | 770 | 0.0 | 1554 |
| MS.gene64582.t1 | MTR_7g083700 | 52.212 | 113 | 52 | 1 | 623 | 735 | 121 | 231 | 1.06e-30 | 123 |
| MS.gene64582.t1 | MTR_4g088605 | 43.299 | 97 | 52 | 2 | 623 | 719 | 100 | 193 | 2.92e-18 | 86.3 |
| MS.gene64582.t1 | MTR_8g470990 | 86.047 | 43 | 5 | 1 | 210 | 251 | 40 | 82 | 7.62e-17 | 77.0 |
| MS.gene64582.t1 | MTR_7g073240 | 37.500 | 104 | 61 | 2 | 628 | 731 | 121 | 220 | 1.37e-15 | 79.7 |
| MS.gene64582.t1 | MTR_4g028130 | 34.641 | 153 | 87 | 5 | 628 | 775 | 314 | 458 | 4.15e-15 | 80.1 |
| MS.gene64582.t1 | MTR_3g467380 | 36.538 | 104 | 62 | 3 | 628 | 731 | 338 | 437 | 1.10e-14 | 79.0 |
| MS.gene64582.t1 | MTR_5g075410 | 31.973 | 147 | 85 | 4 | 628 | 774 | 321 | 452 | 1.62e-14 | 78.2 |
| MS.gene64582.t1 | MTR_2g011940 | 37.500 | 104 | 61 | 3 | 628 | 731 | 352 | 451 | 4.97e-14 | 76.3 |
| MS.gene64582.t1 | MTR_2g011940 | 37.500 | 104 | 61 | 3 | 628 | 731 | 352 | 451 | 5.48e-14 | 76.3 |
| MS.gene64582.t1 | MTR_2g011940 | 37.500 | 104 | 61 | 3 | 628 | 731 | 343 | 442 | 6.39e-14 | 76.3 |
| MS.gene64582.t1 | MTR_4g028130 | 35.000 | 100 | 62 | 2 | 628 | 727 | 314 | 410 | 2.06e-13 | 74.7 |
| MS.gene64582.t1 | MTR_4g028130 | 35.000 | 100 | 62 | 2 | 628 | 727 | 314 | 410 | 2.86e-13 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64582.t1 | AT3G24650 | 46.931 | 782 | 277 | 31 | 19 | 763 | 32 | 712 | 7.03e-160 | 481 |
| MS.gene64582.t1 | AT3G26790 | 49.660 | 147 | 58 | 4 | 589 | 735 | 66 | 196 | 2.52e-36 | 139 |
| MS.gene64582.t1 | AT1G28300 | 56.701 | 97 | 40 | 1 | 623 | 719 | 165 | 259 | 1.36e-29 | 121 |
| MS.gene64582.t1 | AT2G30470 | 34.591 | 159 | 88 | 5 | 624 | 770 | 290 | 444 | 3.69e-16 | 83.6 |
| MS.gene64582.t1 | AT4G32010 | 37.000 | 100 | 60 | 2 | 628 | 727 | 285 | 381 | 2.37e-14 | 77.8 |
| MS.gene64582.t1 | AT4G32010 | 37.000 | 100 | 60 | 2 | 628 | 727 | 281 | 377 | 2.46e-14 | 77.4 |
| MS.gene64582.t1 | AT4G21550 | 37.500 | 104 | 59 | 4 | 628 | 731 | 327 | 424 | 1.45e-13 | 74.7 |
| MS.gene64582.t1 | AT4G21550 | 37.500 | 104 | 59 | 4 | 628 | 731 | 327 | 424 | 1.86e-13 | 74.7 |
| MS.gene64582.t1 | AT4G21550 | 37.500 | 104 | 59 | 4 | 628 | 731 | 327 | 424 | 2.11e-13 | 73.9 |
Find 161 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCTCATGGTATGAATTT+TGG | 0.145459 | 7.3:+45269341 | MS.gene64582:CDS |
| CTTCTTCCTCTGCAGCTTCT+TGG | 0.156164 | 7.3:+45268214 | MS.gene64582:CDS |
| CCATCTCTTGCCTCCAATTC+TGG | 0.191237 | 7.3:-45270375 | None:intergenic |
| GAAATTTAGCAGAAGAAAAT+TGG | 0.230877 | 7.3:+45267983 | MS.gene64582:CDS |
| GAAACAGAACAAGTTGGTTT+TGG | 0.246821 | 7.3:+45267961 | MS.gene64582:CDS |
| TTCCTTGGCACCTGTTGTTC+TGG | 0.247902 | 7.3:+45269658 | MS.gene64582:CDS |
| TTCTTCCTCTGCAGCTTCTT+GGG | 0.260263 | 7.3:+45268215 | MS.gene64582:CDS |
| CATGGATGATGTTAACATTA+TGG | 0.261818 | 7.3:+45268437 | MS.gene64582:CDS |
| CAAAAGTGTTTGCTGTGTTT+TGG | 0.290697 | 7.3:-45269037 | None:intergenic |
| TCACTATGAAATCTCCTTCT+TGG | 0.299532 | 7.3:-45270738 | None:intergenic |
| TTTGTCATCAACTGCTTCTA+TGG | 0.302150 | 7.3:+45268341 | MS.gene64582:CDS |
| ACATTGGAACTTCTCGAGTT+TGG | 0.314913 | 7.3:+45270418 | MS.gene64582:CDS |
| AATTCTTATCAGTTGTTTCC+TGG | 0.316637 | 7.3:+45269383 | MS.gene64582:CDS |
| GAGTTTGGAATATGCGTTAC+AGG | 0.324294 | 7.3:+45270433 | MS.gene64582:CDS |
| AGTATTCAAGGAGATGAATT+AGG | 0.332563 | 7.3:+45268711 | MS.gene64582:CDS |
| AGAAACACATTTGCCAGAAT+TGG | 0.333835 | 7.3:+45270362 | MS.gene64582:CDS |
| GTTAACATTATGGATACTTT+TGG | 0.334842 | 7.3:+45268447 | MS.gene64582:CDS |
| TGTTTCCTGGTCCTGGTGAT+AGG | 0.335577 | 7.3:+45269396 | MS.gene64582:CDS |
| TATCAGTTGTTTCCTGGTCC+TGG | 0.347158 | 7.3:+45269389 | MS.gene64582:CDS |
| TTTGTGTGTGACGGTGTAAA+TGG | 0.349561 | 7.3:+45268681 | MS.gene64582:CDS |
| ATTCTGGGAGCATCAGATAT+TGG | 0.352966 | 7.3:+45270561 | MS.gene64582:intron |
| TGTTGAAGCTTATTCTTGAA+TGG | 0.366685 | 7.3:+45268901 | MS.gene64582:CDS |
| CGATGATAGTGCATGATGAT+AGG | 0.368561 | 7.3:+45268610 | MS.gene64582:CDS |
| GCAAAGTGATGTGGGAAGTC+TGG | 0.373169 | 7.3:+45270222 | MS.gene64582:CDS |
| TGATGAAGAAAACCCTTTAG+TGG | 0.375000 | 7.3:+45268527 | MS.gene64582:CDS |
| GTAGGGCGGTCACGGTCTAC+TGG | 0.390870 | 7.3:-45269698 | None:intergenic |
| TTGTGTGTGACGGTGTAAAT+GGG | 0.391434 | 7.3:+45268682 | MS.gene64582:CDS |
| TCTAATAATGATGTTGTTGT+TGG | 0.394879 | 7.3:+45268399 | MS.gene64582:CDS |
| TCTGATCCACTTGCAAGATT+AGG | 0.399738 | 7.3:+45269539 | MS.gene64582:CDS |
| TTTGATCTAACCATGATGTT+TGG | 0.403522 | 7.3:-45269085 | None:intergenic |
| GAAACAGAACCATTTGTGTA+AGG | 0.406123 | 7.3:-45269179 | None:intergenic |
| ATTTGTGATACAGATGATAA+GGG | 0.410493 | 7.3:+45271311 | MS.gene64582:intron |
| ACAAATGATTGATTGTAGTT+TGG | 0.412145 | 7.3:-45269296 | None:intergenic |
| AATTTGTGATACAGATGATA+AGG | 0.416712 | 7.3:+45271310 | MS.gene64582:intron |
| TATCGGGTGCACTTCGACCC+TGG | 0.418605 | 7.3:-45269742 | None:intergenic |
| TGTTGGAATCAAATCATTCA+TGG | 0.419898 | 7.3:+45269249 | MS.gene64582:CDS |
| GTTGAAGCTTATTCTTGAAT+GGG | 0.421780 | 7.3:+45268902 | MS.gene64582:CDS |
| CTCATGCAAATCCAGGTAAC+TGG | 0.422437 | 7.3:+45269600 | MS.gene64582:CDS |
| CTTGAGGTTCCTTCTACAAA+AGG | 0.425157 | 7.3:+45270192 | MS.gene64582:CDS |
| AACCTTGAATATTCTGATGA+TGG | 0.426625 | 7.3:-45269517 | None:intergenic |
| GATGTTGTTGTTGGTGGTGG+TGG | 0.429366 | 7.3:+45268408 | MS.gene64582:CDS |
| GATGACATGCATGGAAAATC+AGG | 0.429831 | 7.3:-45268099 | None:intergenic |
| GGTGACTTTGTGAAAGCTAA+TGG | 0.431864 | 7.3:+45270712 | MS.gene64582:intron |
| GGAATTGCAGTGGATAATAA+TGG | 0.431976 | 7.3:+45271429 | MS.gene64582:CDS |
| CAAAGTGATGTGGGAAGTCT+GGG | 0.435116 | 7.3:+45270223 | MS.gene64582:CDS |
| AGGTGGGACAGCAGCTTCCT+TGG | 0.437818 | 7.3:+45269643 | MS.gene64582:CDS |
| AATAATGATGTTGTTGTTGG+TGG | 0.439367 | 7.3:+45268402 | MS.gene64582:CDS |
| TGACCATGATGATAATCTAA+TGG | 0.440958 | 7.3:-45268306 | None:intergenic |
| AACCATCATCAGAATATTCA+AGG | 0.441107 | 7.3:+45269515 | MS.gene64582:CDS |
| AGATTAGGTGGTGGAAAAGA+AGG | 0.441852 | 7.3:+45268867 | MS.gene64582:CDS |
| GTCGGCTCAGCCAGAACAAC+AGG | 0.444889 | 7.3:-45269668 | None:intergenic |
| TGGTGGTGGTGGTGATTGCA+TGG | 0.445577 | 7.3:+45268419 | MS.gene64582:CDS |
| AATGATGTTGTTGTTGGTGG+TGG | 0.446582 | 7.3:+45268405 | MS.gene64582:CDS |
| GTTGCTGATCCTTACACAAA+TGG | 0.448875 | 7.3:+45269170 | MS.gene64582:CDS |
| ATCCAGGTAACTGGATGTAT+TGG | 0.449670 | 7.3:+45269609 | MS.gene64582:CDS |
| CTTGTGTGAAATCCACTAAA+GGG | 0.453109 | 7.3:-45268539 | None:intergenic |
| CCAATGGTTGGAGTTGGAGT+TGG | 0.454100 | 7.3:+45269143 | MS.gene64582:CDS |
| CTAGTCATCTTCAAAACAAA+AGG | 0.455119 | 7.3:+45268931 | MS.gene64582:CDS |
| GCAGTTGATGACAAAGTTGT+TGG | 0.458355 | 7.3:-45268333 | None:intergenic |
| GAACTCTGTGTCTGCATGGT+AGG | 0.458673 | 7.3:-45269716 | None:intergenic |
| TTAGATCTTGTTATGGAGTG+TGG | 0.458680 | 7.3:+45267910 | None:intergenic |
| TGTTGAGGAACAAGATTTGA+AGG | 0.459544 | 7.3:-45268987 | None:intergenic |
| TCTGCATGGTAGGGCGGTCA+CGG | 0.463598 | 7.3:-45269706 | None:intergenic |
| CAACAACAGCAACAAGATCT+TGG | 0.467069 | 7.3:+45268372 | MS.gene64582:CDS |
| TTAGTAGCAGCAGGTTGGTA+AGG | 0.468267 | 7.3:-45269215 | None:intergenic |
| GAAAGTGCTGCTAAGAGATT+AGG | 0.469707 | 7.3:+45268852 | MS.gene64582:CDS |
| AATGGGGAAGAGAGTATTCA+AGG | 0.474011 | 7.3:+45268699 | MS.gene64582:CDS |
| AGAAGCTGAGGAAGAAGAAG+AGG | 0.477319 | 7.3:-45268193 | None:intergenic |
| TGTAAGTGATGAAATGAGTA+TGG | 0.477564 | 7.3:+45268746 | MS.gene64582:CDS |
| GGTGATAGGTTGATGAGGTT+AGG | 0.481801 | 7.3:+45269410 | MS.gene64582:CDS |
| TTGATGCATTATTCCCATGC+TGG | 0.484054 | 7.3:-45271398 | None:intergenic |
| AACACATTTGCCAGAATTGG+AGG | 0.485525 | 7.3:+45270365 | MS.gene64582:CDS |
| GGCGGTTTATGTCTCATCAT+AGG | 0.485732 | 7.3:+45269480 | MS.gene64582:CDS |
| TGATATTCATTAGTAGCAGC+AGG | 0.496130 | 7.3:-45269224 | None:intergenic |
| TCCTCGATATTCACTTGTTG+CGG | 0.497932 | 7.3:-45268642 | None:intergenic |
| TCCACAAACCTGTCTCCTAT+CGG | 0.498147 | 7.3:-45269759 | None:intergenic |
| CCACAAACCTGTCTCCTATC+GGG | 0.499467 | 7.3:-45269758 | None:intergenic |
| TCAATTACAATGGAAGACAT+TGG | 0.500827 | 7.3:+45270402 | MS.gene64582:CDS |
| TCTTGTGTGAAATCCACTAA+AGG | 0.501764 | 7.3:-45268540 | None:intergenic |
| TCACAACCAATGGTTGGAGT+TGG | 0.514632 | 7.3:+45269137 | MS.gene64582:CDS |
| AATAATGCATCAAATTCAGT+TGG | 0.520321 | 7.3:+45271408 | MS.gene64582:CDS |
| CCAGAATTGGAGGCAAGAGA+TGG | 0.521085 | 7.3:+45270375 | MS.gene64582:CDS |
| TGCCAATACATCCAGTTACC+TGG | 0.522443 | 7.3:-45269611 | None:intergenic |
| TTTAGATCTGCATGCAAAGT+TGG | 0.524550 | 7.3:+45267933 | MS.gene64582:CDS |
| CGGTCTACTGGAGGCTGTGT+CGG | 0.525844 | 7.3:-45269686 | None:intergenic |
| GTGTCTCGGCGAATGATTTG+AGG | 0.525939 | 7.3:+45268802 | MS.gene64582:CDS |
| CATCCATTAGATTATCATCA+TGG | 0.529410 | 7.3:+45268303 | MS.gene64582:CDS |
| GATTAGGTGGTGGAAAAGAA+GGG | 0.531409 | 7.3:+45268868 | MS.gene64582:CDS |
| AACTCTGTGTCTGCATGGTA+GGG | 0.531617 | 7.3:-45269715 | None:intergenic |
| TTGAAACACGCGTTCGACTC+AGG | 0.532743 | 7.3:-45269062 | None:intergenic |
| GTTGGAATCAAATCATTCAT+GGG | 0.534566 | 7.3:+45269250 | MS.gene64582:CDS |
| TGCACCAATGTTGCTGCTGG+TGG | 0.534906 | 7.3:+45269575 | MS.gene64582:CDS |
| AGAAGAGGATGGCTCGGCAA+CGG | 0.537506 | 7.3:+45269459 | MS.gene64582:CDS |
| GATGATAGTGCATGATGATA+GGG | 0.538792 | 7.3:+45268611 | MS.gene64582:CDS |
| AAGTGCACCCGATAGGAGAC+AGG | 0.539885 | 7.3:+45269751 | MS.gene64582:CDS |
| GTGAATGAAACAGAACAAGT+TGG | 0.541250 | 7.3:+45267955 | MS.gene64582:CDS |
| AGGTATTATTGTGTTAATGT+TGG | 0.545897 | 7.3:-45268967 | None:intergenic |
| AGATGGAATTTCAATTACAA+TGG | 0.546108 | 7.3:+45270392 | MS.gene64582:CDS |
| GGTGGTTCTCATGCAAATCC+AGG | 0.547601 | 7.3:+45269593 | MS.gene64582:CDS |
| AGCCAGAACAACAGGTGCCA+AGG | 0.553934 | 7.3:-45269660 | None:intergenic |
| AACAGCCCAAGAAGCTGCAG+AGG | 0.555739 | 7.3:-45268220 | None:intergenic |
| CGTGTTTCAACCAAACATCA+TGG | 0.556011 | 7.3:+45269075 | MS.gene64582:CDS |
| TAGTAGCAGCAGGTTGGTAA+GGG | 0.556194 | 7.3:-45269214 | None:intergenic |
| ATTGGTTGTGAAAATTGTTG+TGG | 0.556322 | 7.3:-45269125 | None:intergenic |
| ATTGGCCAAACAACAAAAGC+AGG | 0.559048 | 7.3:+45270579 | MS.gene64582:CDS |
| GCAGACACAGAGTTCTCACC+AGG | 0.559551 | 7.3:+45269724 | MS.gene64582:CDS |
| AACAATGTGCTACAACCTCA+TGG | 0.560848 | 7.3:+45269329 | MS.gene64582:CDS |
| ATGCATGGAAAATCAGGTAA+AGG | 0.563307 | 7.3:-45268093 | None:intergenic |
| GTGAGAACTCTGTGTCTGCA+TGG | 0.567470 | 7.3:-45269720 | None:intergenic |
| CAAAAGAAGCTAGAAAGAAG+AGG | 0.568012 | 7.3:+45269444 | MS.gene64582:CDS |
| ATCTAACAAAGATAGTGTCT+CGG | 0.568134 | 7.3:+45268788 | MS.gene64582:CDS |
| GCAACAAGTTCAAGTGCAAG+AGG | 0.568536 | 7.3:+45268563 | MS.gene64582:CDS |
| CTATCATCATGCACTATCAT+CGG | 0.568658 | 7.3:-45268609 | None:intergenic |
| TCTTGAAACTGTTGTTGTTG+AGG | 0.572652 | 7.3:-45269002 | None:intergenic |
| GGGCGGTCACGGTCTACTGG+AGG | 0.573786 | 7.3:-45269695 | None:intergenic |
| CATGGAAAATCAGGTAAAGG+TGG | 0.574020 | 7.3:-45268090 | None:intergenic |
| CTAGAAAGAAGAGGATGGCT+CGG | 0.580461 | 7.3:+45269453 | MS.gene64582:CDS |
| AGAACCACCAGCAGCAACAT+TGG | 0.585844 | 7.3:-45269579 | None:intergenic |
| AATACTACAAATGATCAAGA+TGG | 0.586104 | 7.3:+45268012 | MS.gene64582:CDS |
| AAATTCAGTTGGAATTGCAG+TGG | 0.586655 | 7.3:+45271419 | MS.gene64582:CDS |
| AATTGCACCAATGTTGCTGC+TGG | 0.589434 | 7.3:+45269572 | MS.gene64582:CDS |
| TGCAGAGGAAGAAGAAGCTG+AGG | 0.589506 | 7.3:-45268205 | None:intergenic |
| CCAGCACCTAATCTTGCAAG+TGG | 0.590776 | 7.3:-45269545 | None:intergenic |
| AAAGCTAATGGACTCCAAGA+AGG | 0.591042 | 7.3:+45270724 | MS.gene64582:CDS |
| CCAACTCCAACTCCAACCAT+TGG | 0.593836 | 7.3:-45269143 | None:intergenic |
| ATTCATTAGTAGCAGCAGGT+TGG | 0.599869 | 7.3:-45269220 | None:intergenic |
| TACTAATGAATATCACATGT+TGG | 0.601457 | 7.3:+45269232 | MS.gene64582:CDS |
| AACCTCATCAACCTATCACC+AGG | 0.601661 | 7.3:-45269407 | None:intergenic |
| GATGTTGAAGTAGATCATCA+AGG | 0.604610 | 7.3:+45268252 | MS.gene64582:CDS |
| GGAAGCCTGAAAAGAACTTG+AGG | 0.606267 | 7.3:+45270176 | MS.gene64582:CDS |
| GTTGATGACAAAGTTGTTGG+AGG | 0.610564 | 7.3:-45268330 | None:intergenic |
| AGAAGCTAGAAAGAAGAGGA+TGG | 0.610747 | 7.3:+45269448 | MS.gene64582:CDS |
| AGGGTCGAAGTGCACCCGAT+AGG | 0.612569 | 7.3:+45269744 | MS.gene64582:CDS |
| AGAGGATGGCTCGGCAACGG+CGG | 0.616260 | 7.3:+45269462 | MS.gene64582:CDS |
| GGTTGTGAAAATTGTTGTGG+AGG | 0.618026 | 7.3:-45269122 | None:intergenic |
| ATGTATTGGCAGACTATGAC+AGG | 0.620175 | 7.3:+45269623 | MS.gene64582:CDS |
| CAACAAGTTCAAGTGCAAGA+GGG | 0.621679 | 7.3:+45268564 | MS.gene64582:CDS |
| TGTAGTTGAAGTACATGCAA+TGG | 0.622529 | 7.3:-45268160 | None:intergenic |
| GGAGTTAAAGTGAGGCAACA+AGG | 0.623818 | 7.3:+45271333 | MS.gene64582:CDS |
| TGTGTGTGACGGTGTAAATG+GGG | 0.629065 | 7.3:+45268683 | MS.gene64582:CDS |
| TCTGTGTCTGCATGGTAGGG+CGG | 0.631104 | 7.3:-45269712 | None:intergenic |
| ATCAACCTATCACCAGGACC+AGG | 0.632824 | 7.3:-45269401 | None:intergenic |
| CCACTTGCAAGATTAGGTGC+TGG | 0.635600 | 7.3:+45269545 | MS.gene64582:CDS |
| GAAGATGATGATGACATGCA+TGG | 0.637958 | 7.3:-45268108 | None:intergenic |
| TTTGTGATACAGATGATAAG+GGG | 0.638390 | 7.3:+45271312 | MS.gene64582:intron |
| ATATATTCTGATGTGAAGTG+TGG | 0.638403 | 7.3:+45270760 | MS.gene64582:CDS |
| AGTGCTGCTAAGAGATTAGG+TGG | 0.639649 | 7.3:+45268855 | MS.gene64582:CDS |
| TGTTGTGGAGGTACAATGAG+AGG | 0.642005 | 7.3:-45269110 | None:intergenic |
| GTCCTGGTGATAGGTTGATG+AGG | 0.656286 | 7.3:+45269405 | MS.gene64582:CDS |
| ATGTATTTGCTAGAGAACAC+TGG | 0.658087 | 7.3:+45270602 | MS.gene64582:CDS |
| TATTGGCAGACTATGACAGG+TGG | 0.659210 | 7.3:+45269626 | MS.gene64582:CDS |
| GCTGCTAAGAGATTAGGTGG+TGG | 0.661001 | 7.3:+45268858 | MS.gene64582:CDS |
| TGATAAGGGGAGTTAAAGTG+AGG | 0.663130 | 7.3:+45271325 | MS.gene64582:CDS |
| ATTGGCAGACTATGACAGGT+GGG | 0.666700 | 7.3:+45269627 | MS.gene64582:CDS |
| CCTCCAAAATTCATACCATG+AGG | 0.677157 | 7.3:-45269344 | None:intergenic |
| TTGGAATCAAATCATTCATG+GGG | 0.679978 | 7.3:+45269251 | MS.gene64582:CDS |
| GCAACAAGGAACAAAACCAG+AGG | 0.684606 | 7.3:+45271347 | MS.gene64582:CDS |
| GATGAATTAGGTGCATGTGA+TGG | 0.687203 | 7.3:+45268723 | MS.gene64582:CDS |
| ACCGCAACAAGTGAATATCG+AGG | 0.707077 | 7.3:+45268641 | MS.gene64582:CDS |
| AAAGTGATGTGGGAAGTCTG+GGG | 0.734540 | 7.3:+45270224 | MS.gene64582:CDS |
| CAGACACAGAGTTCTCACCA+GGG | 0.787957 | 7.3:+45269725 | MS.gene64582:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTATAAGTTTTAAATTA+TGG | + | chr7.3:45269897-45269916 | MS.gene64582:intron | 10.0% |
| !! | AAAAAAAACATTATAAGAGA+AGG | - | chr7.3:45270800-45270819 | None:intergenic | 15.0% |
| !! | TATCATATAATAAAGTTAGA+CGG | - | chr7.3:45271243-45271262 | None:intergenic | 15.0% |
| !! | TTTATTTAATAATTGCTATC+TGG | + | chr7.3:45271037-45271056 | MS.gene64582:intron | 15.0% |
| !!! | AGAAAATCAATAATTACTTT+TGG | - | chr7.3:45270262-45270281 | None:intergenic | 15.0% |
| !! | GACAATTATAATTGATTGAT+CGG | - | chr7.3:45270076-45270095 | None:intergenic | 20.0% |
| !!! | AAAAGTTGAGAATTAATTTG+TGG | + | chr7.3:45271281-45271300 | MS.gene64582:intron | 20.0% |
| !!! | AAAGTTGAGAATTAATTTGT+GGG | + | chr7.3:45271282-45271301 | MS.gene64582:intron | 20.0% |
| !!! | TATATTCCTTTTCATTTTGT+AGG | + | chr7.3:45270691-45270710 | MS.gene64582:intron | 20.0% |
| !!! | TCTTTTCGATTATTTATTCT+GGG | + | chr7.3:45270546-45270565 | MS.gene64582:intron | 20.0% |
| ! | AATAATGCATCAAATTCAGT+TGG | + | chr7.3:45271408-45271427 | MS.gene64582:CDS | 25.0% |
| ! | AATACTACAAATGATCAAGA+TGG | + | chr7.3:45268012-45268031 | MS.gene64582:CDS | 25.0% |
| ! | AATTTGTGATACAGATGATA+AGG | + | chr7.3:45271310-45271329 | MS.gene64582:intron | 25.0% |
| ! | ACAAATGATTGATTGTAGTT+TGG | - | chr7.3:45269299-45269318 | None:intergenic | 25.0% |
| ! | AGATGGAATTTCAATTACAA+TGG | + | chr7.3:45270392-45270411 | MS.gene64582:CDS | 25.0% |
| ! | AGGTATTATTGTGTTAATGT+TGG | - | chr7.3:45268970-45268989 | None:intergenic | 25.0% |
| ! | ATATAATAAAGTTAGACGGT+TGG | - | chr7.3:45271239-45271258 | None:intergenic | 25.0% |
| ! | ATTTGTGATACAGATGATAA+GGG | + | chr7.3:45271311-45271330 | MS.gene64582:intron | 25.0% |
| ! | GAAATTTAGCAGAAGAAAAT+TGG | + | chr7.3:45267983-45268002 | MS.gene64582:CDS | 25.0% |
| ! | GTTGATGTATTTGATTGATA+GGG | + | chr7.3:45270151-45270170 | MS.gene64582:intron | 25.0% |
| ! | TACTAATGAATATCACATGT+TGG | + | chr7.3:45269232-45269251 | MS.gene64582:CDS | 25.0% |
| ! | TCTAATAATGATGTTGTTGT+TGG | + | chr7.3:45268399-45268418 | MS.gene64582:CDS | 25.0% |
| ! | TGTTGATGTATTTGATTGAT+AGG | + | chr7.3:45270150-45270169 | MS.gene64582:intron | 25.0% |
| !! | CTCTTTTCGATTATTTATTC+TGG | + | chr7.3:45270545-45270564 | MS.gene64582:intron | 25.0% |
| !! | GTTAACATTATGGATACTTT+TGG | + | chr7.3:45268447-45268466 | MS.gene64582:CDS | 25.0% |
| !!! | GTTTGGTATGATTTTTGTTT+TGG | - | chr7.3:45270920-45270939 | None:intergenic | 25.0% |
| AAAAATCATACCAAACCAAC+CGG | + | chr7.3:45270924-45270943 | MS.gene64582:intron | 30.0% | |
| AACCATCATCAGAATATTCA+AGG | + | chr7.3:45269515-45269534 | MS.gene64582:CDS | 30.0% | |
| AACCTTGAATATTCTGATGA+TGG | - | chr7.3:45269520-45269539 | None:intergenic | 30.0% | |
| AAGTCACCTACAAAATGAAA+AGG | - | chr7.3:45270700-45270719 | None:intergenic | 30.0% | |
| AATGTAACGAGGCAAAAAAA+GGG | - | chr7.3:45270886-45270905 | None:intergenic | 30.0% | |
| AGTAACATGCATCAAAAACA+TGG | + | chr7.3:45268279-45268298 | MS.gene64582:CDS | 30.0% | |
| AGTATTCAAGGAGATGAATT+AGG | + | chr7.3:45268711-45268730 | MS.gene64582:CDS | 30.0% | |
| ATATATTCTGATGTGAAGTG+TGG | + | chr7.3:45270760-45270779 | MS.gene64582:CDS | 30.0% | |
| ATCTAACAAAGATAGTGTCT+CGG | + | chr7.3:45268788-45268807 | MS.gene64582:CDS | 30.0% | |
| ATGTATTTGATTGATAGGGT+TGG | + | chr7.3:45270155-45270174 | MS.gene64582:intron | 30.0% | |
| ATTGCAAAAACATCAGAAAG+AGG | + | chr7.3:45270338-45270357 | MS.gene64582:intron | 30.0% | |
| ATTGGTTGTGAAAATTGTTG+TGG | - | chr7.3:45269128-45269147 | None:intergenic | 30.0% | |
| CACAATTCAATTAGTTGAAC+CGG | - | chr7.3:45270946-45270965 | None:intergenic | 30.0% | |
| CATATTTATCCATTTGTCTG+CGG | + | chr7.3:45269995-45270014 | MS.gene64582:intron | 30.0% | |
| CATCCATTAGATTATCATCA+TGG | + | chr7.3:45268303-45268322 | MS.gene64582:CDS | 30.0% | |
| CATGGATGATGTTAACATTA+TGG | + | chr7.3:45268437-45268456 | MS.gene64582:CDS | 30.0% | |
| CTAATTGAATTGTGAATCCT+CGG | + | chr7.3:45270952-45270971 | MS.gene64582:intron | 30.0% | |
| CTAGTCATCTTCAAAACAAA+AGG | + | chr7.3:45268931-45268950 | MS.gene64582:CDS | 30.0% | |
| GAGTCATTCTTCTTATTCAT+TGG | + | chr7.3:45270626-45270645 | MS.gene64582:intron | 30.0% | |
| GATAAATATGACCACAATTG+TGG | - | chr7.3:45269985-45270004 | None:intergenic | 30.0% | |
| GTTGAAGCTTATTCTTGAAT+GGG | + | chr7.3:45268902-45268921 | MS.gene64582:CDS | 30.0% | |
| GTTGGAATCAAATCATTCAT+GGG | + | chr7.3:45269250-45269269 | MS.gene64582:CDS | 30.0% | |
| TACAGGTAAGCAAATTTACA+TGG | + | chr7.3:45270450-45270469 | MS.gene64582:intron | 30.0% | |
| TAGTGAATTACAATGTAACG+AGG | - | chr7.3:45270897-45270916 | None:intergenic | 30.0% | |
| TCAATTACAATGGAAGACAT+TGG | + | chr7.3:45270402-45270421 | MS.gene64582:CDS | 30.0% | |
| TGACCATGATGATAATCTAA+TGG | - | chr7.3:45268309-45268328 | None:intergenic | 30.0% | |
| TGTAAGTGATGAAATGAGTA+TGG | + | chr7.3:45268746-45268765 | MS.gene64582:CDS | 30.0% | |
| TGTTGAAGCTTATTCTTGAA+TGG | + | chr7.3:45268901-45268920 | MS.gene64582:CDS | 30.0% | |
| TGTTGGAATCAAATCATTCA+TGG | + | chr7.3:45269249-45269268 | MS.gene64582:CDS | 30.0% | |
| TTGGAATCAAATCATTCATG+GGG | + | chr7.3:45269251-45269270 | MS.gene64582:CDS | 30.0% | |
| TTTGATCTAACCATGATGTT+TGG | - | chr7.3:45269088-45269107 | None:intergenic | 30.0% | |
| TTTGTGATACAGATGATAAG+GGG | + | chr7.3:45271312-45271331 | MS.gene64582:intron | 30.0% | |
| ! | AATAATGATGTTGTTGTTGG+TGG | + | chr7.3:45268402-45268421 | MS.gene64582:CDS | 30.0% |
| ! | AATTCTTATCAGTTGTTTCC+TGG | + | chr7.3:45269383-45269402 | MS.gene64582:CDS | 30.0% |
| ! | ACAACAATTTTCACAACCAA+TGG | + | chr7.3:45269127-45269146 | MS.gene64582:CDS | 30.0% |
| ! | TCTTCTTATTCATTGGTGTT+TGG | + | chr7.3:45270633-45270652 | MS.gene64582:intron | 30.0% |
| ! | TGAAATGAGTATGGTTTTCT+TGG | + | chr7.3:45268755-45268774 | MS.gene64582:CDS | 30.0% |
| !! | CATTTTGAAAAATCGAAGCA+GGG | - | chr7.3:45268509-45268528 | None:intergenic | 30.0% |
| !! | TATGGATACTTTTGGTTACA+TGG | + | chr7.3:45268455-45268474 | MS.gene64582:CDS | 30.0% |
| !! | TCATTTTGAAAAATCGAAGC+AGG | - | chr7.3:45268510-45268529 | None:intergenic | 30.0% |
| AAAATCAGTTGAACCAACCA+TGG | - | chr7.3:45270984-45271003 | None:intergenic | 35.0% | |
| AAACCAGAGGCAAAAAAATC+AGG | + | chr7.3:45271360-45271379 | MS.gene64582:CDS | 35.0% | |
| AAATCACAGAAAAACCAGCA+TGG | + | chr7.3:45271384-45271403 | MS.gene64582:CDS | 35.0% | |
| AAATTCAGTTGGAATTGCAG+TGG | + | chr7.3:45271419-45271438 | MS.gene64582:CDS | 35.0% | |
| AATCACAGAAAAACCAGCAT+GGG | + | chr7.3:45271385-45271404 | MS.gene64582:CDS | 35.0% | |
| AGAAACACATTTGCCAGAAT+TGG | + | chr7.3:45270362-45270381 | MS.gene64582:CDS | 35.0% | |
| ATGCATGGAAAATCAGGTAA+AGG | - | chr7.3:45268096-45268115 | None:intergenic | 35.0% | |
| ATTCAATTAGTTGAACCGGT+TGG | - | chr7.3:45270942-45270961 | None:intergenic | 35.0% | |
| CAAAAGAAGCTAGAAAGAAG+AGG | + | chr7.3:45269444-45269463 | MS.gene64582:CDS | 35.0% | |
| CAATGTAACGAGGCAAAAAA+AGG | - | chr7.3:45270887-45270906 | None:intergenic | 35.0% | |
| CAATTGTGGCTGCAATATAA+TGG | + | chr7.3:45269930-45269949 | MS.gene64582:intron | 35.0% | |
| CATCATGTTCACATTCTCAA+GGG | + | chr7.3:45271192-45271211 | MS.gene64582:intron | 35.0% | |
| CTATCATCATGCACTATCAT+CGG | - | chr7.3:45268612-45268631 | None:intergenic | 35.0% | |
| CTTGTGTGAAATCCACTAAA+GGG | - | chr7.3:45268542-45268561 | None:intergenic | 35.0% | |
| GAAACAGAACCATTTGTGTA+AGG | - | chr7.3:45269182-45269201 | None:intergenic | 35.0% | |
| GATGTTGAAGTAGATCATCA+AGG | + | chr7.3:45268252-45268271 | MS.gene64582:CDS | 35.0% | |
| GGAATTGCAGTGGATAATAA+TGG | + | chr7.3:45271429-45271448 | MS.gene64582:CDS | 35.0% | |
| GTGAATGAAACAGAACAAGT+TGG | + | chr7.3:45267955-45267974 | MS.gene64582:CDS | 35.0% | |
| TCACTATGAAATCTCCTTCT+TGG | - | chr7.3:45270741-45270760 | None:intergenic | 35.0% | |
| TCCAACTGTCTAAATTGCAA+CGG | + | chr7.3:45271137-45271156 | MS.gene64582:intron | 35.0% | |
| TCTTGTGTGAAATCCACTAA+AGG | - | chr7.3:45268543-45268562 | None:intergenic | 35.0% | |
| TGATATTCATTAGTAGCAGC+AGG | - | chr7.3:45269227-45269246 | None:intergenic | 35.0% | |
| TGATGAAGAAAACCCTTTAG+TGG | + | chr7.3:45268527-45268546 | MS.gene64582:CDS | 35.0% | |
| TGTAGTTGAAGTACATGCAA+TGG | - | chr7.3:45268163-45268182 | None:intergenic | 35.0% | |
| TGTTGAGGAACAAGATTTGA+AGG | - | chr7.3:45268990-45269009 | None:intergenic | 35.0% | |
| TTGAACCAATTAACCATTGC+TGG | + | chr7.3:45271080-45271099 | MS.gene64582:intron | 35.0% | |
| TTTAGATCTGCATGCAAAGT+TGG | + | chr7.3:45267933-45267952 | MS.gene64582:CDS | 35.0% | |
| TTTGTCATCAACTGCTTCTA+TGG | + | chr7.3:45268341-45268360 | MS.gene64582:CDS | 35.0% | |
| ! | ATGTATTTGCTAGAGAACAC+TGG | + | chr7.3:45270602-45270621 | MS.gene64582:CDS | 35.0% |
| ! | CAACCTCATGGTATGAATTT+TGG | + | chr7.3:45269341-45269360 | MS.gene64582:CDS | 35.0% |
| ! | CAATTTTCACAACCAATGGT+TGG | + | chr7.3:45269131-45269150 | MS.gene64582:CDS | 35.0% |
| ! | GATCAAGATGGTGATCTTTT+AGG | + | chr7.3:45268024-45268043 | MS.gene64582:CDS | 35.0% |
| ! | GATGATAGTGCATGATGATA+GGG | + | chr7.3:45268611-45268630 | MS.gene64582:CDS | 35.0% |
| ! | GCTTCAAAACCTTTTGTAGA+AGG | - | chr7.3:45270204-45270223 | None:intergenic | 35.0% |
| ! | GTACATGCAATGGTTTTCAA+TGG | - | chr7.3:45268153-45268172 | None:intergenic | 35.0% |
| ! | TCTTGAAACTGTTGTTGTTG+AGG | - | chr7.3:45269005-45269024 | None:intergenic | 35.0% |
| !! | GGTATGAATTTTGGAGGTTA+TGG | + | chr7.3:45269350-45269369 | MS.gene64582:CDS | 35.0% |
| !!! | CAAAAGTGTTTGCTGTGTTT+TGG | - | chr7.3:45269040-45269059 | None:intergenic | 35.0% |
| !!! | GAAACAGAACAAGTTGGTTT+TGG | + | chr7.3:45267961-45267980 | MS.gene64582:CDS | 35.0% |
| !!! | GTTTTGAAGCAAAGTGATGT+GGG | + | chr7.3:45270214-45270233 | MS.gene64582:CDS | 35.0% |
| !!! | TACATCCTGCTTTTGTTGTT+TGG | - | chr7.3:45270587-45270606 | None:intergenic | 35.0% |
| !!! | TTTCCTGATTTTTTTGCCTC+TGG | - | chr7.3:45271366-45271385 | None:intergenic | 35.0% |
| !!! | TTTTTTCGCTTTGGTGAAGA+TGG | - | chr7.3:45271459-45271478 | None:intergenic | 35.0% |
| AACAATGTGCTACAACCTCA+TGG | + | chr7.3:45269329-45269348 | MS.gene64582:CDS | 40.0% | |
| AACACATTTGCCAGAATTGG+AGG | + | chr7.3:45270365-45270384 | MS.gene64582:CDS | 40.0% | |
| AACCAATTAACCATTGCTGG+AGG | + | chr7.3:45271083-45271102 | MS.gene64582:intron | 40.0% | |
| AAGTTCCAAGCTAATCTCTC+AGG | - | chr7.3:45270851-45270870 | None:intergenic | 40.0% | |
| ACATTGGAACTTCTCGAGTT+TGG | + | chr7.3:45270418-45270437 | MS.gene64582:CDS | 40.0% | |
| ACCGTTGCAATTTAGACAGT+TGG | - | chr7.3:45271141-45271160 | None:intergenic | 40.0% | |
| AGAAGCTAGAAAGAAGAGGA+TGG | + | chr7.3:45269448-45269467 | MS.gene64582:CDS | 40.0% | |
| ATCCAGGTAACTGGATGTAT+TGG | + | chr7.3:45269609-45269628 | MS.gene64582:CDS | 40.0% | |
| ATGGTCAACAACTGCAATTG+TGG | + | chr7.3:45269916-45269935 | MS.gene64582:intron | 40.0% | |
| ATTCATTAGTAGCAGCAGGT+TGG | - | chr7.3:45269223-45269242 | None:intergenic | 40.0% | |
| ATTGGCCAAACAACAAAAGC+AGG | + | chr7.3:45270579-45270598 | MS.gene64582:CDS | 40.0% | |
| CAACAACAGCAACAAGATCT+TGG | + | chr7.3:45268372-45268391 | MS.gene64582:CDS | 40.0% | |
| CAACAAGTTCAAGTGCAAGA+GGG | + | chr7.3:45268564-45268583 | MS.gene64582:CDS | 40.0% | |
| CATGGAAAATCAGGTAAAGG+TGG | - | chr7.3:45268093-45268112 | None:intergenic | 40.0% | |
| CCTCCAAAATTCATACCATG+AGG | - | chr7.3:45269347-45269366 | None:intergenic | 40.0% | |
| CGTGTTTCAACCAAACATCA+TGG | + | chr7.3:45269075-45269094 | MS.gene64582:CDS | 40.0% | |
| CTGCGGATATCGTAGTATAA+TGG | + | chr7.3:45270012-45270031 | MS.gene64582:intron | 40.0% | |
| CTTGAGGTTCCTTCTACAAA+AGG | + | chr7.3:45270192-45270211 | MS.gene64582:CDS | 40.0% | |
| GATGAATTAGGTGCATGTGA+TGG | + | chr7.3:45268723-45268742 | MS.gene64582:CDS | 40.0% | |
| GATGACATGCATGGAAAATC+AGG | - | chr7.3:45268102-45268121 | None:intergenic | 40.0% | |
| GCATCATGTTCACATTCTCA+AGG | + | chr7.3:45271191-45271210 | MS.gene64582:intron | 40.0% | |
| GGTGACTTTGTGAAAGCTAA+TGG | + | chr7.3:45270712-45270731 | MS.gene64582:intron | 40.0% | |
| GGTTGTGAAAATTGTTGTGG+AGG | - | chr7.3:45269125-45269144 | None:intergenic | 40.0% | |
| GTTGCTGATCCTTACACAAA+TGG | + | chr7.3:45269170-45269189 | MS.gene64582:CDS | 40.0% | |
| TCTGATCCACTTGCAAGATT+AGG | + | chr7.3:45269539-45269558 | MS.gene64582:CDS | 40.0% | |
| TGAATCCTCGGATTAAACCA+TGG | + | chr7.3:45270964-45270983 | MS.gene64582:intron | 40.0% | |
| TGATAAGGGGAGTTAAAGTG+AGG | + | chr7.3:45271325-45271344 | MS.gene64582:CDS | 40.0% | |
| TTGATGCATTATTCCCATGC+TGG | - | chr7.3:45271401-45271420 | None:intergenic | 40.0% | |
| TTGTGTGTGACGGTGTAAAT+GGG | + | chr7.3:45268682-45268701 | MS.gene64582:CDS | 40.0% | |
| TTTGTGTGTGACGGTGTAAA+TGG | + | chr7.3:45268681-45268700 | MS.gene64582:CDS | 40.0% | |
| ! | AATGATGTTGTTGTTGGTGG+TGG | + | chr7.3:45268405-45268424 | MS.gene64582:CDS | 40.0% |
| ! | AGGAACCTCAAGTTCTTTTC+AGG | - | chr7.3:45270184-45270203 | None:intergenic | 40.0% |
| ! | ATGTATTGGCAGACTATGAC+AGG | + | chr7.3:45269623-45269642 | MS.gene64582:CDS | 40.0% |
| ! | ATTAGTTGAACCGGTTGGTT+TGG | - | chr7.3:45270937-45270956 | None:intergenic | 40.0% |
| ! | CCTCATGGTATGAATTTTGG+AGG | + | chr7.3:45269344-45269363 | MS.gene64582:CDS | 40.0% |
| ! | CGATGATAGTGCATGATGAT+AGG | + | chr7.3:45268610-45268629 | MS.gene64582:CDS | 40.0% |
| ! | CTAGCTTCTTTTGTAGCAGA+AGG | - | chr7.3:45269437-45269456 | None:intergenic | 40.0% |
| ! | GAAGATGATGATGACATGCA+TGG | - | chr7.3:45268111-45268130 | None:intergenic | 40.0% |
| ! | GAGTTTGGAATATGCGTTAC+AGG | + | chr7.3:45270433-45270452 | MS.gene64582:CDS | 40.0% |
| ! | GATTTCCTGAGAGATTAGCT+TGG | + | chr7.3:45270843-45270862 | MS.gene64582:intron | 40.0% |
| ! | TCCTCGATATTCACTTGTTG+CGG | - | chr7.3:45268645-45268664 | None:intergenic | 40.0% |
| ! | TGAGTATGGTTTTCTTGGAG+TGG | + | chr7.3:45268760-45268779 | MS.gene64582:CDS | 40.0% |
| ! | TGGTTCAATCGATTCAGCAA+TGG | - | chr7.3:45271068-45271087 | None:intergenic | 40.0% |
| !! | AAAGCTAATGGACTCCAAGA+AGG | + | chr7.3:45270724-45270743 | MS.gene64582:CDS | 40.0% |
| !! | AATGGGGAAGAGAGTATTCA+AGG | + | chr7.3:45268699-45268718 | MS.gene64582:CDS | 40.0% |
| !! | AGATTAGGTGGTGGAAAAGA+AGG | + | chr7.3:45268867-45268886 | MS.gene64582:CDS | 40.0% |
| !! | ATTCTGGGAGCATCAGATAT+TGG | + | chr7.3:45270561-45270580 | MS.gene64582:intron | 40.0% |
| !! | GAAAGTGCTGCTAAGAGATT+AGG | + | chr7.3:45268852-45268871 | MS.gene64582:CDS | 40.0% |
| !! | GACGATGTTTTTGTGTGTGA+CGG | + | chr7.3:45268672-45268691 | MS.gene64582:CDS | 40.0% |
| !! | GATTAGGTGGTGGAAAAGAA+GGG | + | chr7.3:45268868-45268887 | MS.gene64582:CDS | 40.0% |
| !! | GCAGTTGATGACAAAGTTGT+TGG | - | chr7.3:45268336-45268355 | None:intergenic | 40.0% |
| !! | GTTGATGACAAAGTTGTTGG+AGG | - | chr7.3:45268333-45268352 | None:intergenic | 40.0% |
| !!! | GGTTTTGAAGCAAAGTGATG+TGG | + | chr7.3:45270213-45270232 | MS.gene64582:CDS | 40.0% |
| AAAGTGATGTGGGAAGTCTG+GGG | + | chr7.3:45270224-45270243 | MS.gene64582:CDS | 45.0% | |
| AACCTCATCAACCTATCACC+AGG | - | chr7.3:45269410-45269429 | None:intergenic | 45.0% | |
| AACTCTGTGTCTGCATGGTA+GGG | - | chr7.3:45269718-45269737 | None:intergenic | 45.0% | |
| AATTGCACCAATGTTGCTGC+TGG | + | chr7.3:45269572-45269591 | MS.gene64582:CDS | 45.0% | |
| ACCAACCATGGTTTAATCCG+AGG | - | chr7.3:45270972-45270991 | None:intergenic | 45.0% | |
| ACCGCAACAAGTGAATATCG+AGG | + | chr7.3:45268641-45268660 | MS.gene64582:CDS | 45.0% | |
| AGAAGCTGAGGAAGAAGAAG+AGG | - | chr7.3:45268196-45268215 | None:intergenic | 45.0% | |
| ATTGGCAGACTATGACAGGT+GGG | + | chr7.3:45269627-45269646 | MS.gene64582:CDS | 45.0% | |
| CAAAGTGATGTGGGAAGTCT+GGG | + | chr7.3:45270223-45270242 | MS.gene64582:CDS | 45.0% | |
| CTACGATATCCGCAGACAAA+TGG | - | chr7.3:45270007-45270026 | None:intergenic | 45.0% | |
| CTAGAAAGAAGAGGATGGCT+CGG | + | chr7.3:45269453-45269472 | MS.gene64582:CDS | 45.0% | |
| CTCATGCAAATCCAGGTAAC+TGG | + | chr7.3:45269600-45269619 | MS.gene64582:CDS | 45.0% | |
| GACCTCCAGCAATGGTTAAT+TGG | - | chr7.3:45271088-45271107 | None:intergenic | 45.0% | |
| GATGCCTTGTCTCAATCCAA+GGG | - | chr7.3:45271176-45271195 | None:intergenic | 45.0% | |
| GCAACAAGGAACAAAACCAG+AGG | + | chr7.3:45271347-45271366 | MS.gene64582:CDS | 45.0% | |
| GCAACAAGTTCAAGTGCAAG+AGG | + | chr7.3:45268563-45268582 | MS.gene64582:CDS | 45.0% | |
| GGAAGCCTGAAAAGAACTTG+AGG | + | chr7.3:45270176-45270195 | MS.gene64582:CDS | 45.0% | |
| GGAGTTAAAGTGAGGCAACA+AGG | + | chr7.3:45271333-45271352 | MS.gene64582:CDS | 45.0% | |
| GGCGGTTTATGTCTCATCAT+AGG | + | chr7.3:45269480-45269499 | MS.gene64582:CDS | 45.0% | |
| TATTGGCAGACTATGACAGG+TGG | + | chr7.3:45269626-45269645 | MS.gene64582:CDS | 45.0% | |
| TCACAACCAATGGTTGGAGT+TGG | + | chr7.3:45269137-45269156 | MS.gene64582:CDS | 45.0% | |
| TCCACAAACCTGTCTCCTAT+CGG | - | chr7.3:45269762-45269781 | None:intergenic | 45.0% | |
| TCCTCGGATTAAACCATGGT+TGG | + | chr7.3:45270968-45270987 | MS.gene64582:intron | 45.0% | |
| TGATGCCTTGTCTCAATCCA+AGG | - | chr7.3:45271177-45271196 | None:intergenic | 45.0% | |
| TGCCAATACATCCAGTTACC+TGG | - | chr7.3:45269614-45269633 | None:intergenic | 45.0% | |
| TGTGTGTGACGGTGTAAATG+GGG | + | chr7.3:45268683-45268702 | MS.gene64582:CDS | 45.0% | |
| TTCTTCCTCTGCAGCTTCTT+GGG | + | chr7.3:45268215-45268234 | MS.gene64582:CDS | 45.0% | |
| TTGACCCTTGGATTGAGACA+AGG | + | chr7.3:45271169-45271188 | MS.gene64582:intron | 45.0% | |
| ! | AGTGCTGCTAAGAGATTAGG+TGG | + | chr7.3:45268855-45268874 | MS.gene64582:CDS | 45.0% |
| ! | TATCAGTTGTTTCCTGGTCC+TGG | + | chr7.3:45269389-45269408 | MS.gene64582:CDS | 45.0% |
| ! | TGTTGTGGAGGTACAATGAG+AGG | - | chr7.3:45269113-45269132 | None:intergenic | 45.0% |
| !! | GGCTTTAGAAGTCTCTGCAA+GGG | + | chr7.3:45269951-45269970 | MS.gene64582:intron | 45.0% |
| !! | GGTGATAGGTTGATGAGGTT+AGG | + | chr7.3:45269410-45269429 | MS.gene64582:CDS | 45.0% |
| !! | TAGTAGCAGCAGGTTGGTAA+GGG | - | chr7.3:45269217-45269236 | None:intergenic | 45.0% |
| !! | TGGCTTTAGAAGTCTCTGCA+AGG | + | chr7.3:45269950-45269969 | MS.gene64582:intron | 45.0% |
| !! | TTAGTAGCAGCAGGTTGGTA+AGG | - | chr7.3:45269218-45269237 | None:intergenic | 45.0% |
| !!! | GCTGTGTTTTGGTTCTGACA+TGG | - | chr7.3:45269029-45269048 | None:intergenic | 45.0% |
| !!! | TTTTTTTTACTTAATTTTTA+TGG | + | chr7.3:45270815-45270834 | MS.gene64582:intron | 5.0% |
| AGAACCACCAGCAGCAACAT+TGG | - | chr7.3:45269582-45269601 | None:intergenic | 50.0% | |
| ATCAACCTATCACCAGGACC+AGG | - | chr7.3:45269404-45269423 | None:intergenic | 50.0% | |
| CAGACACAGAGTTCTCACCA+GGG | + | chr7.3:45269725-45269744 | MS.gene64582:CDS | 50.0% | |
| CCAACTCCAACTCCAACCAT+TGG | - | chr7.3:45269146-45269165 | None:intergenic | 50.0% | |
| CCAATGGTTGGAGTTGGAGT+TGG | + | chr7.3:45269143-45269162 | MS.gene64582:CDS | 50.0% | |
| CCACAAACCTGTCTCCTATC+GGG | - | chr7.3:45269761-45269780 | None:intergenic | 50.0% | |
| CCACTTGCAAGATTAGGTGC+TGG | + | chr7.3:45269545-45269564 | MS.gene64582:CDS | 50.0% | |
| CCAGAATTGGAGGCAAGAGA+TGG | + | chr7.3:45270375-45270394 | MS.gene64582:CDS | 50.0% | |
| CCAGCACCTAATCTTGCAAG+TGG | - | chr7.3:45269548-45269567 | None:intergenic | 50.0% | |
| CCATCTCTTGCCTCCAATTC+TGG | - | chr7.3:45270378-45270397 | None:intergenic | 50.0% | |
| CGGTGAACAATCTTGACCCT+TGG | + | chr7.3:45271157-45271176 | MS.gene64582:intron | 50.0% | |
| CTTCTTCCTCTGCAGCTTCT+TGG | + | chr7.3:45268214-45268233 | MS.gene64582:CDS | 50.0% | |
| GAACTCTGTGTCTGCATGGT+AGG | - | chr7.3:45269719-45269738 | None:intergenic | 50.0% | |
| GCAAAGTGATGTGGGAAGTC+TGG | + | chr7.3:45270222-45270241 | MS.gene64582:CDS | 50.0% | |
| GCTGCTAAGAGATTAGGTGG+TGG | + | chr7.3:45268858-45268877 | MS.gene64582:CDS | 50.0% | |
| GGGCATAGCAACCACAATTG+TGG | + | chr7.3:45269971-45269990 | MS.gene64582:intron | 50.0% | |
| GGTGGTTCTCATGCAAATCC+AGG | + | chr7.3:45269593-45269612 | MS.gene64582:CDS | 50.0% | |
| GTGAGAACTCTGTGTCTGCA+TGG | - | chr7.3:45269723-45269742 | None:intergenic | 50.0% | |
| GTGTCTCGGCGAATGATTTG+AGG | + | chr7.3:45268802-45268821 | MS.gene64582:CDS | 50.0% | |
| TCTAGTGAGACCTCCAGCAA+TGG | - | chr7.3:45271096-45271115 | None:intergenic | 50.0% | |
| TGCAGAGGAAGAAGAAGCTG+AGG | - | chr7.3:45268208-45268227 | None:intergenic | 50.0% | |
| TGTTTCCTGGTCCTGGTGAT+AGG | + | chr7.3:45269396-45269415 | MS.gene64582:CDS | 50.0% | |
| TTCCTTGGCACCTGTTGTTC+TGG | + | chr7.3:45269658-45269677 | MS.gene64582:CDS | 50.0% | |
| TTCTCAAGGGCTCGCGTTTA+TGG | + | chr7.3:45271205-45271224 | MS.gene64582:intron | 50.0% | |
| TTGAAACACGCGTTCGACTC+AGG | - | chr7.3:45269065-45269084 | None:intergenic | 50.0% | |
| !! | GATGTTGTTGTTGGTGGTGG+TGG | + | chr7.3:45268408-45268427 | MS.gene64582:CDS | 50.0% |
| !! | GTCCTGGTGATAGGTTGATG+AGG | + | chr7.3:45269405-45269424 | MS.gene64582:CDS | 50.0% |
| AACAGCCCAAGAAGCTGCAG+AGG | - | chr7.3:45268223-45268242 | None:intergenic | 55.0% | |
| AAGTGCACCCGATAGGAGAC+AGG | + | chr7.3:45269751-45269770 | MS.gene64582:CDS | 55.0% | |
| AGCCAGAACAACAGGTGCCA+AGG | - | chr7.3:45269663-45269682 | None:intergenic | 55.0% | |
| CCCGATAGGAGACAGGTTTG+TGG | + | chr7.3:45269758-45269777 | MS.gene64582:intron | 55.0% | |
| GCAGACACAGAGTTCTCACC+AGG | + | chr7.3:45269724-45269743 | MS.gene64582:CDS | 55.0% | |
| TCTGTGTCTGCATGGTAGGG+CGG | - | chr7.3:45269715-45269734 | None:intergenic | 55.0% | |
| TGCACCAATGTTGCTGCTGG+TGG | + | chr7.3:45269575-45269594 | MS.gene64582:CDS | 55.0% | |
| ! | AGAAGAGGATGGCTCGGCAA+CGG | + | chr7.3:45269459-45269478 | MS.gene64582:CDS | 55.0% |
| !! | TGGTGGTGGTGGTGATTGCA+TGG | + | chr7.3:45268419-45268438 | MS.gene64582:CDS | 55.0% |
| AGGGTCGAAGTGCACCCGAT+AGG | + | chr7.3:45269744-45269763 | MS.gene64582:CDS | 60.0% | |
| AGGTGGGACAGCAGCTTCCT+TGG | + | chr7.3:45269643-45269662 | MS.gene64582:CDS | 60.0% | |
| CGGTCTACTGGAGGCTGTGT+CGG | - | chr7.3:45269689-45269708 | None:intergenic | 60.0% | |
| TATCGGGTGCACTTCGACCC+TGG | - | chr7.3:45269745-45269764 | None:intergenic | 60.0% | |
| TCTGCATGGTAGGGCGGTCA+CGG | - | chr7.3:45269709-45269728 | None:intergenic | 60.0% | |
| ! | GTCGGCTCAGCCAGAACAAC+AGG | - | chr7.3:45269671-45269690 | None:intergenic | 60.0% |
| GTAGGGCGGTCACGGTCTAC+TGG | - | chr7.3:45269701-45269720 | None:intergenic | 65.0% | |
| ! | AGAGGATGGCTCGGCAACGG+CGG | + | chr7.3:45269462-45269481 | MS.gene64582:CDS | 65.0% |
| GGGCGGTCACGGTCTACTGG+AGG | - | chr7.3:45269698-45269717 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 45267922 | 45271482 | 45267922 | ID=MS.gene64582 |
| chr7.3 | mRNA | 45267922 | 45271482 | 45267922 | ID=MS.gene64582.t1;Parent=MS.gene64582 |
| chr7.3 | exon | 45267922 | 45269772 | 45267922 | ID=MS.gene64582.t1.exon1;Parent=MS.gene64582.t1 |
| chr7.3 | CDS | 45267922 | 45269772 | 45267922 | ID=cds.MS.gene64582.t1;Parent=MS.gene64582.t1 |
| chr7.3 | exon | 45270172 | 45270264 | 45270172 | ID=MS.gene64582.t1.exon2;Parent=MS.gene64582.t1 |
| chr7.3 | CDS | 45270172 | 45270264 | 45270172 | ID=cds.MS.gene64582.t1;Parent=MS.gene64582.t1 |
| chr7.3 | exon | 45270354 | 45270454 | 45270354 | ID=MS.gene64582.t1.exon3;Parent=MS.gene64582.t1 |
| chr7.3 | CDS | 45270354 | 45270454 | 45270354 | ID=cds.MS.gene64582.t1;Parent=MS.gene64582.t1 |
| chr7.3 | exon | 45270571 | 45270623 | 45270571 | ID=MS.gene64582.t1.exon4;Parent=MS.gene64582.t1 |
| chr7.3 | CDS | 45270571 | 45270623 | 45270571 | ID=cds.MS.gene64582.t1;Parent=MS.gene64582.t1 |
| chr7.3 | exon | 45270713 | 45270789 | 45270713 | ID=MS.gene64582.t1.exon5;Parent=MS.gene64582.t1 |
| chr7.3 | CDS | 45270713 | 45270789 | 45270713 | ID=cds.MS.gene64582.t1;Parent=MS.gene64582.t1 |
| chr7.3 | exon | 45271324 | 45271482 | 45271324 | ID=MS.gene64582.t1.exon6;Parent=MS.gene64582.t1 |
| chr7.3 | CDS | 45271324 | 45271482 | 45271324 | ID=cds.MS.gene64582.t1;Parent=MS.gene64582.t1 |
| Gene Sequence |
| Protein sequence |
