Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64593.t1 | XP_003617651.2 | 97.5 | 763 | 19 | 0 | 1 | 763 | 1 | 763 | 0.00E+00 | 1418.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64593.t1 | Q5PNS0 | 31.3 | 278 | 178 | 6 | 357 | 622 | 12 | 288 | 2.9e-29 | 132.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64593.t1 | G7K8Q7 | 97.5 | 763 | 19 | 0 | 1 | 763 | 1 | 763 | 0.0e+00 | 1418.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene64593.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64593.t1 | MTR_5g093940 | 98.296 | 763 | 13 | 0 | 1 | 763 | 1 | 763 | 0.0 | 1550 |
| MS.gene64593.t1 | MTR_5g093940 | 96.154 | 780 | 13 | 1 | 1 | 763 | 1 | 780 | 0.0 | 1537 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64593.t1 | AT1G50620 | 36.576 | 514 | 244 | 13 | 3 | 510 | 2 | 439 | 9.36e-84 | 280 |
| MS.gene64593.t1 | AT3G20280 | 34.172 | 477 | 222 | 12 | 19 | 491 | 19 | 407 | 2.50e-69 | 244 |
| MS.gene64593.t1 | AT3G20280 | 34.172 | 477 | 222 | 12 | 19 | 491 | 19 | 407 | 2.50e-69 | 244 |
| MS.gene64593.t1 | AT3G20280 | 35.356 | 478 | 214 | 14 | 19 | 491 | 19 | 406 | 1.17e-68 | 242 |
| MS.gene64593.t1 | AT3G20280 | 35.356 | 478 | 214 | 14 | 19 | 491 | 19 | 406 | 1.17e-68 | 242 |
| MS.gene64593.t1 | AT3G20280 | 43.704 | 135 | 74 | 2 | 358 | 491 | 13 | 146 | 1.99e-34 | 138 |
Find 222 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCCGACCTTGGTCGTTTC+TGG | 0.132994 | 5.3:+76236726 | None:intergenic |
| CGCATCACACGGCCATATTT+TGG | 0.179992 | 5.3:+76238534 | None:intergenic |
| ACCTTGGTCGTTTCTGGTTT+GGG | 0.205311 | 5.3:+76236732 | None:intergenic |
| GCTTTGGTATTAACAACTTC+TGG | 0.239867 | 5.3:+76238790 | None:intergenic |
| GCTGAATTAGAGGGAAAATT+TGG | 0.254184 | 5.3:+76238495 | None:intergenic |
| CCGAATTCTGTTAGAGGTTC+TGG | 0.265010 | 5.3:-76237934 | MS.gene64593:CDS |
| GAATATATCATCGTATGATT+TGG | 0.275441 | 5.3:+76236690 | None:intergenic |
| TACCAATCTTGCTGCATTGA+TGG | 0.287633 | 5.3:-76237808 | MS.gene64593:CDS |
| AGATTCAGAAGTATCTTTAC+AGG | 0.291754 | 5.3:+76238170 | None:intergenic |
| AACCCACTTCACCCCAGTTT+TGG | 0.292600 | 5.3:+76237293 | None:intergenic |
| CCTTGTATATCTCTCGTATC+TGG | 0.292839 | 5.3:+76238330 | None:intergenic |
| GACCTTGGTCGTTTCTGGTT+TGG | 0.295700 | 5.3:+76236731 | None:intergenic |
| TACTATGCACCAGCCGTTGC+AGG | 0.304496 | 5.3:-76238871 | MS.gene64593:CDS |
| AAGCCTTTGCCTCCAAAATA+TGG | 0.319020 | 5.3:-76238546 | MS.gene64593:CDS |
| TTACTTGCCTAGATGAAATA+AGG | 0.322752 | 5.3:+76236663 | None:intergenic |
| TGCTGAACAAATAGATTCTA+AGG | 0.324390 | 5.3:-76238199 | MS.gene64593:CDS |
| CTACTTTCCTGATGATTTGC+CGG | 0.326963 | 5.3:-76237256 | MS.gene64593:CDS |
| ATGTGGGAAGATTCCAAAAC+TGG | 0.327053 | 5.3:-76237306 | MS.gene64593:CDS |
| TGGGGCTCCTTATGTCCTTC+AGG | 0.331452 | 5.3:-76239733 | MS.gene64593:CDS |
| CGTTTCTGGTTTGGGACACT+AGG | 0.333064 | 5.3:+76236740 | None:intergenic |
| ACCTTCGGATCTAAGTTATC+TGG | 0.333379 | 5.3:+76238444 | None:intergenic |
| GCAGATTTCACACATATGTT+TGG | 0.346253 | 5.3:+76238261 | None:intergenic |
| CTAAACTGTAGCAAATTCAT+TGG | 0.350286 | 5.3:-76239105 | MS.gene64593:intron |
| TTGCTTGCCTGAAGTTTAGA+AGG | 0.364469 | 5.3:+76237727 | None:intergenic |
| GCCGTTGCAGGGTGGGAATA+TGG | 0.364784 | 5.3:-76238859 | MS.gene64593:CDS |
| TTGAATACCAGCTGAATTAG+AGG | 0.365719 | 5.3:+76238485 | None:intergenic |
| TCTGGTTTCTTCTCTGAAGA+TGG | 0.371119 | 5.3:+76238462 | None:intergenic |
| GCACAACCGAATTCTGTTAG+AGG | 0.372523 | 5.3:-76237940 | MS.gene64593:CDS |
| GATGATTTGCCGGGGAATAT+TGG | 0.377341 | 5.3:-76237246 | MS.gene64593:CDS |
| CTCCATCAATGCAGCAAGAT+TGG | 0.380179 | 5.3:+76237806 | None:intergenic |
| TAGTGCTTCCACTGGCGTGC+AGG | 0.381050 | 5.3:-76238232 | MS.gene64593:CDS |
| AATATATCATCGTATGATTT+GGG | 0.384448 | 5.3:+76236691 | None:intergenic |
| AAGGTTGTGGATCAGAGGTT+AGG | 0.385332 | 5.3:-76241040 | MS.gene64593:CDS |
| CCAGAACCTCTAACAGAATT+CGG | 0.389101 | 5.3:+76237934 | None:intergenic |
| TAACAGCAGCTCAGAACATT+AGG | 0.389751 | 5.3:-76238929 | MS.gene64593:CDS |
| TTAGCCAGCTCAGATATGTT+AGG | 0.389868 | 5.3:+76238138 | None:intergenic |
| ACTAACACCTTCTAAACTTC+AGG | 0.394509 | 5.3:-76237734 | MS.gene64593:intron |
| CATCAGTGAATGCTCCTTCA+TGG | 0.395283 | 5.3:-76239073 | MS.gene64593:CDS |
| AGGTGTTAGTTTGCCATGGC+TGG | 0.400222 | 5.3:+76237747 | None:intergenic |
| GGAGTCCATGTGGGATGATC+AGG | 0.400694 | 5.3:+76238765 | None:intergenic |
| TCCACCGGTGTTTGTTTGAA+AGG | 0.401303 | 5.3:+76240031 | None:intergenic |
| CTTCTCAGCAATCGACATCT+TGG | 0.402209 | 5.3:+76241006 | None:intergenic |
| CTCTGTGATGCCTGTGAAAA+GGG | 0.404413 | 5.3:-76238663 | MS.gene64593:CDS |
| CCTTATGTCCTTCAGGTTCA+AGG | 0.407142 | 5.3:-76239726 | MS.gene64593:intron |
| TGGATCAGGCTTCTCGTCAA+TGG | 0.408193 | 5.3:+76238281 | None:intergenic |
| CCATTTGTTGTTAACATCTG+TGG | 0.410839 | 5.3:+76238417 | None:intergenic |
| GTGTAGCATTATCATTTGAT+TGG | 0.412208 | 5.3:+76236457 | None:intergenic |
| TTCACACATATGTTTGGATC+AGG | 0.414156 | 5.3:+76238267 | None:intergenic |
| TGCATAGTAGACATATTTCC+AGG | 0.419884 | 5.3:+76238885 | None:intergenic |
| AAGGAGCATTCACTGATGAT+TGG | 0.420539 | 5.3:+76239078 | None:intergenic |
| CAGACTCAACCTGTGTCATT+AGG | 0.425045 | 5.3:-76239044 | MS.gene64593:CDS |
| ACGAGTGGCGGAGATTGTTT+TGG | 0.427221 | 5.3:-76241236 | MS.gene64593:CDS |
| CCACCGGTGTTTGTTTGAAA+GGG | 0.428372 | 5.3:+76240032 | None:intergenic |
| ATCATCTACAGTAGTTTGAT+TGG | 0.428584 | 5.3:-76236484 | MS.gene64593:CDS |
| CTAGGCAATGCTACAGAAGA+TGG | 0.430376 | 5.3:+76239795 | None:intergenic |
| GGTAGTGTGATTGATGATCT+TGG | 0.433796 | 5.3:-76241073 | MS.gene64593:CDS |
| TACTTTCCTGATGATTTGCC+GGG | 0.434354 | 5.3:-76237255 | MS.gene64593:CDS |
| GTGGGATGATCAGGAAGCTT+TGG | 0.435804 | 5.3:+76238774 | None:intergenic |
| CTTTATTATTAGTAATCAAA+AGG | 0.437685 | 5.3:-76238019 | MS.gene64593:CDS |
| TGGCACTGCATGAAGTGCTT+GGG | 0.438105 | 5.3:-76238582 | MS.gene64593:CDS |
| GCCTGTGTCGGAACCGATGC+TGG | 0.438410 | 5.3:-76241362 | MS.gene64593:CDS |
| AACATCTGTGGGCTGACCTT+CGG | 0.439150 | 5.3:+76238429 | None:intergenic |
| CTCAGTATTGTGATTGGTAC+TGG | 0.439782 | 5.3:+76238374 | None:intergenic |
| GGTGGAGGAGAATGAGAATT+CGG | 0.441423 | 5.3:-76241272 | MS.gene64593:CDS |
| CATAACTCTGTCAAGGTTGA+AGG | 0.446865 | 5.3:-76238990 | MS.gene64593:CDS |
| CTTGTATATCTCTCGTATCT+GGG | 0.448811 | 5.3:+76238331 | None:intergenic |
| TAGGCCATTCATTACTCAAA+CGG | 0.450525 | 5.3:-76238910 | MS.gene64593:CDS |
| TGCAGGGTGGGAATATGGTT+CGG | 0.450729 | 5.3:-76238854 | MS.gene64593:CDS |
| AACTGGGGTGAAGTGGGTTA+AGG | 0.454696 | 5.3:-76237289 | MS.gene64593:CDS |
| CCACAGATGTTAACAACAAA+TGG | 0.455029 | 5.3:-76238417 | MS.gene64593:CDS |
| CTGCTGATGCAACCGTATCA+AGG | 0.456875 | 5.3:-76238965 | MS.gene64593:CDS |
| TTCATTTCCTTATTTCATCT+AGG | 0.458542 | 5.3:-76236670 | MS.gene64593:CDS |
| ATTGTTGGTGGTGAAGCTAT+TGG | 0.458790 | 5.3:-76241094 | MS.gene64593:CDS |
| TGAGATGTATATGTTGTAGA+AGG | 0.461719 | 5.3:+76240056 | None:intergenic |
| AATGGAAACTCTGTTCCAAC+TGG | 0.462215 | 5.3:-76238399 | MS.gene64593:CDS |
| AGGCCATTCATTACTCAAAC+GGG | 0.462455 | 5.3:-76238909 | MS.gene64593:CDS |
| GGCATTACACCAGAAACAAT+GGG | 0.462964 | 5.3:+76239840 | None:intergenic |
| AGAAGATCCTGCAGCAAGAT+GGG | 0.463622 | 5.3:+76239905 | None:intergenic |
| AAAATTTGGTGATGTAATTG+AGG | 0.464766 | 5.3:+76238509 | None:intergenic |
| ATATTCCCCGGCAAATCATC+AGG | 0.467697 | 5.3:+76237249 | None:intergenic |
| CCTTGAACCTGAAGGACATA+AGG | 0.468335 | 5.3:+76239726 | None:intergenic |
| ATGCCTCCCCATCTTGCTGC+AGG | 0.468712 | 5.3:-76239912 | MS.gene64593:CDS |
| AGGTTGTGGATCAGAGGTTA+GGG | 0.469590 | 5.3:-76241039 | MS.gene64593:CDS |
| TTGGCACTGCATGAAGTGCT+TGG | 0.469894 | 5.3:-76238583 | MS.gene64593:CDS |
| TCTCTGTGATGCCTGTGAAA+AGG | 0.471396 | 5.3:-76238664 | MS.gene64593:CDS |
| TTCTGAGCTGCTGTTACTTG+TGG | 0.472825 | 5.3:+76238936 | None:intergenic |
| AACATTCGAACAGCAGTTGT+TGG | 0.473666 | 5.3:+76239990 | None:intergenic |
| TTCATTACTCAAACGGGACC+TGG | 0.476773 | 5.3:-76238903 | MS.gene64593:CDS |
| AACCAGAAACGACCAAGGTC+GGG | 0.478303 | 5.3:-76236728 | MS.gene64593:CDS |
| GAATTCATAATAGAGTTGAT+TGG | 0.486542 | 5.3:-76238602 | MS.gene64593:CDS |
| TTTCTCCCCATGTGACTGCT+AGG | 0.489377 | 5.3:+76239819 | None:intergenic |
| GAGAGAAGCGAGGACGAAGC+TGG | 0.490332 | 5.3:-76241149 | MS.gene64593:CDS |
| TCCACTGGCGTGCAGGGTGA+AGG | 0.494130 | 5.3:-76238225 | MS.gene64593:CDS |
| CATTTGTTGTTAACATCTGT+GGG | 0.495351 | 5.3:+76238418 | None:intergenic |
| CTCTAATGACTGATGGCTGC+AGG | 0.498012 | 5.3:+76238625 | None:intergenic |
| CTGCAGCCATCAGTCATTAG+AGG | 0.498511 | 5.3:-76238624 | MS.gene64593:CDS |
| TATTCCCACCCTGCAACGGC+TGG | 0.501073 | 5.3:+76238862 | None:intergenic |
| ATAGCTCACATGCTGTAGAA+TGG | 0.501093 | 5.3:-76237870 | MS.gene64593:CDS |
| TTACTCATATAATCTCTTGA+CGG | 0.504323 | 5.3:+76238741 | None:intergenic |
| CCACAGTTTAAAGTTACTGC+AGG | 0.508542 | 5.3:-76239762 | MS.gene64593:CDS |
| TTCTCAGCAATCGACATCTT+GGG | 0.510448 | 5.3:+76241007 | None:intergenic |
| CAGAAGATCCTGCAGCAAGA+TGG | 0.511296 | 5.3:+76239904 | None:intergenic |
| CTGCAGTAACTTTAAACTGT+GGG | 0.511405 | 5.3:+76239763 | None:intergenic |
| TTGTGGACCTGCCCTTGATA+CGG | 0.512083 | 5.3:+76238953 | None:intergenic |
| AAGTTACTGCAGGATTGAGT+GGG | 0.513481 | 5.3:-76239752 | MS.gene64593:CDS |
| AGTTGAGAATGCAGTGTCAC+AGG | 0.514317 | 5.3:-76238082 | MS.gene64593:CDS |
| TGGATTGAATGCTAAGGTTG+TGG | 0.515077 | 5.3:-76241053 | MS.gene64593:CDS |
| GAGCAAGAAGGCGAAGGTGG+AGG | 0.520743 | 5.3:-76241287 | MS.gene64593:CDS |
| TTCAATGCTAGATGAAATGT+TGG | 0.520996 | 5.3:+76238305 | None:intergenic |
| AGCTCAACCTCAACATCAGT+TGG | 0.521719 | 5.3:+76241175 | None:intergenic |
| TCAAACAAACACCGGTGGAA+TGG | 0.521960 | 5.3:-76240027 | MS.gene64593:CDS |
| ATATCTGAGCTGGCTAAAAG+TGG | 0.523182 | 5.3:-76238132 | MS.gene64593:CDS |
| AATTCGGTTGTGCAGCATCT+AGG | 0.523508 | 5.3:+76237950 | None:intergenic |
| ACCTTGACAGAGTTATGAGC+AGG | 0.525046 | 5.3:+76238996 | None:intergenic |
| GACGCCATGGAAACTGTAGA+AGG | 0.525946 | 5.3:+76239936 | None:intergenic |
| TGCACCAGCCGTTGCAGGGT+GGG | 0.526817 | 5.3:-76238866 | MS.gene64593:CDS |
| GGTTCAAAGCTCACATCGGT+TGG | 0.527871 | 5.3:-76236775 | MS.gene64593:CDS |
| ACCGATGCTGGATCCGCCAC+CGG | 0.529287 | 5.3:-76241350 | MS.gene64593:CDS |
| GTTGAGCAAGAAGGCGAAGG+TGG | 0.534577 | 5.3:-76241290 | MS.gene64593:CDS |
| TGACGGCTCAGTATTGTGAT+TGG | 0.535262 | 5.3:+76238368 | None:intergenic |
| AATGCCTTCTACAGTTTCCA+TGG | 0.538341 | 5.3:-76239940 | MS.gene64593:CDS |
| TAGAAGGTGTTAGTTTGCCA+TGG | 0.541388 | 5.3:+76237743 | None:intergenic |
| ATGTCAAGGGATTGCTCCGA+AGG | 0.543374 | 5.3:-76241119 | MS.gene64593:CDS |
| ATTCCAAAACTGGGGTGAAG+TGG | 0.544447 | 5.3:-76237296 | MS.gene64593:CDS |
| ACCATATTCCCACCCTGCAA+CGG | 0.548347 | 5.3:+76238858 | None:intergenic |
| AGGCATTACACCAGAAACAA+TGG | 0.552320 | 5.3:+76239839 | None:intergenic |
| TCTTCCTAACATATCTGAGC+TGG | 0.553003 | 5.3:-76238142 | MS.gene64593:CDS |
| CCGCCACCGGAGATTGAAAA+CGG | 0.556312 | 5.3:-76241337 | MS.gene64593:CDS |
| GCATTCTCAACTTGAGAACC+TGG | 0.556429 | 5.3:+76238093 | None:intergenic |
| AAAGTTACTGCAGGATTGAG+TGG | 0.556480 | 5.3:-76239753 | MS.gene64593:CDS |
| GCGGTTGAGCAAGAAGGCGA+AGG | 0.557032 | 5.3:-76241293 | MS.gene64593:CDS |
| TCACCACCAACAATATCCTT+CGG | 0.558219 | 5.3:+76241103 | None:intergenic |
| TTCCAAAACTGGGGTGAAGT+GGG | 0.558948 | 5.3:-76237295 | MS.gene64593:CDS |
| TCCGGTGGCGGATCCAGCAT+CGG | 0.560863 | 5.3:+76241349 | None:intergenic |
| GTTTCTGGTTTGGGACACTA+GGG | 0.561882 | 5.3:+76236741 | None:intergenic |
| ACCTTCACCCTGCACGCCAG+TGG | 0.562531 | 5.3:+76238224 | None:intergenic |
| ATTGCTCCGAAGGATATTGT+TGG | 0.566615 | 5.3:-76241109 | MS.gene64593:CDS |
| AAACCAGAAACGACCAAGGT+CGG | 0.567740 | 5.3:-76236729 | MS.gene64593:CDS |
| ACCAGATAACTTAGATCCGA+AGG | 0.568578 | 5.3:-76238445 | MS.gene64593:CDS |
| TCAGAGTGACTAGGTATCAA+AGG | 0.568771 | 5.3:+76238828 | None:intergenic |
| TGCTGATGCAACCGTATCAA+GGG | 0.569247 | 5.3:-76238964 | MS.gene64593:CDS |
| TGTAATGCCTAGCAGTCACA+TGG | 0.570579 | 5.3:-76239826 | MS.gene64593:CDS |
| TCCAGCATCGGTTCCGACAC+AGG | 0.571150 | 5.3:+76241361 | None:intergenic |
| GATGGAGGACGTGCCTGTGT+CGG | 0.576373 | 5.3:-76241374 | MS.gene64593:CDS |
| AGAGGAGCGGTTGAGCAAGA+AGG | 0.576752 | 5.3:-76241299 | MS.gene64593:CDS |
| AAGCTGGCGGTACTATGTCA+AGG | 0.578849 | 5.3:-76241133 | MS.gene64593:CDS |
| AAGTGCTTGGGTTTAAGCGG+TGG | 0.579160 | 5.3:-76238570 | MS.gene64593:CDS |
| GTATTTGTTCGCAAAATCAA+AGG | 0.580117 | 5.3:-76240984 | MS.gene64593:intron |
| AATCAAAAGGAATCTCATGA+AGG | 0.581954 | 5.3:-76238006 | MS.gene64593:CDS |
| CCTGCAGTAACTTTAAACTG+TGG | 0.583662 | 5.3:+76239762 | None:intergenic |
| TGAATTCCTCTAATGACTGA+TGG | 0.584828 | 5.3:+76238618 | None:intergenic |
| ATGGGGAGGCATAGACGCCA+TGG | 0.586488 | 5.3:+76239923 | None:intergenic |
| TAGTGCTGACGTCCCGACCT+TGG | 0.586910 | 5.3:+76236716 | None:intergenic |
| GATGCAACCGTATCAAGGGC+AGG | 0.587331 | 5.3:-76238960 | MS.gene64593:CDS |
| GCAGCTTGTAGTGCTTCCAC+TGG | 0.588290 | 5.3:-76238240 | MS.gene64593:CDS |
| CCGGAGATTGAAAACGGAGG+AGG | 0.589231 | 5.3:-76241331 | MS.gene64593:CDS |
| ATGCTAAGGTTGTGGATCAG+AGG | 0.590563 | 5.3:-76241045 | MS.gene64593:CDS |
| ACTATGCACCAGCCGTTGCA+GGG | 0.591052 | 5.3:-76238870 | MS.gene64593:CDS |
| GACACAGGCACGTCCTCCAT+CGG | 0.592581 | 5.3:+76241376 | None:intergenic |
| GCATTGATGGAGTAACATAT+AGG | 0.592756 | 5.3:-76237795 | MS.gene64593:CDS |
| GCTCCGAAGGATATTGTTGG+TGG | 0.596231 | 5.3:-76241106 | MS.gene64593:CDS |
| CGGAGGAGGAGAGCAACAAG+AGG | 0.597896 | 5.3:-76241317 | MS.gene64593:CDS |
| GGAGAATGAGAATTCGGAGG+CGG | 0.597927 | 5.3:-76241266 | MS.gene64593:CDS |
| TGTGGGAAGATTCCAAAACT+GGG | 0.603012 | 5.3:-76237305 | MS.gene64593:CDS |
| CAAGGATGACCAATATTCCC+CGG | 0.605167 | 5.3:+76237237 | None:intergenic |
| GGTCCCGTTTGAGTAATGAA+TGG | 0.605708 | 5.3:+76238906 | None:intergenic |
| GATCCTGCAGCAAGATGGGG+AGG | 0.607645 | 5.3:+76239909 | None:intergenic |
| AGTGCTTCCACTGGCGTGCA+GGG | 0.607648 | 5.3:-76238231 | MS.gene64593:CDS |
| TGAATACCAGCTGAATTAGA+GGG | 0.607918 | 5.3:+76238486 | None:intergenic |
| CTGGTTGATTGATATTGCGA+TGG | 0.607966 | 5.3:+76239879 | None:intergenic |
| GGTTCTGGAACTAATACTGA+AGG | 0.611301 | 5.3:-76237919 | MS.gene64593:CDS |
| GGAGTAACATATAGGCTGCA+AGG | 0.611649 | 5.3:-76237787 | MS.gene64593:CDS |
| TCACATGCTGTAGAATGGAT+TGG | 0.614992 | 5.3:-76237865 | MS.gene64593:CDS |
| GCCTGCTCATAACTCTGTCA+AGG | 0.615629 | 5.3:-76238997 | MS.gene64593:CDS |
| TGATCTTGGATTGAATGCTA+AGG | 0.619045 | 5.3:-76241059 | MS.gene64593:CDS |
| ACGATTGTCAACCATTCCAC+CGG | 0.621253 | 5.3:+76240016 | None:intergenic |
| GGGGTATTTGAGTCAAATGA+CGG | 0.622951 | 5.3:+76238351 | None:intergenic |
| CCCTTTCAAACAAACACCGG+TGG | 0.624793 | 5.3:-76240032 | MS.gene64593:CDS |
| AGCTGGCGGTACTATGTCAA+GGG | 0.626107 | 5.3:-76241132 | MS.gene64593:CDS |
| GGAAATTACCTTGAACCTGA+AGG | 0.627294 | 5.3:+76239718 | None:intergenic |
| AGCTTCCTGATCATCCCACA+TGG | 0.628655 | 5.3:-76238770 | MS.gene64593:CDS |
| TAGTCACTCTGATATTGCAA+AGG | 0.630150 | 5.3:-76238817 | MS.gene64593:CDS |
| ACGATGGCGACGATGCGAAG+TGG | 0.630685 | 5.3:-76241205 | MS.gene64593:CDS |
| GAAGATCCTGCAGCAAGATG+GGG | 0.631370 | 5.3:+76239906 | None:intergenic |
| TTGTATATCTCTCGTATCTG+GGG | 0.631520 | 5.3:+76238332 | None:intergenic |
| TAGAAATGTATCAGAAAACA+AGG | 0.631821 | 5.3:-76239021 | MS.gene64593:CDS |
| CCAGATACGAGAGATATACA+AGG | 0.639717 | 5.3:-76238330 | MS.gene64593:CDS |
| CAACCCTTTCAAACAAACAC+CGG | 0.644891 | 5.3:-76240035 | MS.gene64593:CDS |
| ATGCACCAGCCGTTGCAGGG+TGG | 0.646972 | 5.3:-76238867 | MS.gene64593:CDS |
| GAGGAGAGCAACAAGAGGAG+CGG | 0.647384 | 5.3:-76241312 | MS.gene64593:CDS |
| TTGAGCTGATGAGAGAAGCG+AGG | 0.651450 | 5.3:-76241159 | MS.gene64593:CDS |
| GGAAATTTACAATCATCACC+AGG | 0.653794 | 5.3:-76238111 | MS.gene64593:CDS |
| AAAGAAGCCAACTGATGTTG+AGG | 0.654128 | 5.3:-76241182 | MS.gene64593:CDS |
| TTGTATATCTGAAGTCAATG+AGG | 0.654755 | 5.3:-76237217 | MS.gene64593:intron |
| ACATTTCTACCTAATGACAC+AGG | 0.655198 | 5.3:+76239035 | None:intergenic |
| TAATTGAGGATCGCATCACA+CGG | 0.655580 | 5.3:+76238523 | None:intergenic |
| CTGTAGAAGGCATTGATGTG+TGG | 0.656663 | 5.3:+76239949 | None:intergenic |
| ATGAAGTGCTTGGGTTTAAG+CGG | 0.659398 | 5.3:-76238573 | MS.gene64593:CDS |
| ACTTTCCTGATGATTTGCCG+GGG | 0.664009 | 5.3:-76237254 | MS.gene64593:CDS |
| TGAGTCTGTACTGACCATGA+AGG | 0.666230 | 5.3:+76239059 | None:intergenic |
| CTTGACGGAGGAGTCCATGT+GGG | 0.667564 | 5.3:+76238756 | None:intergenic |
| GGCGGAATTGAAACGAGTGG+CGG | 0.668581 | 5.3:-76241248 | MS.gene64593:CDS |
| AGTTACTGCAGGATTGAGTG+GGG | 0.674228 | 5.3:-76239751 | MS.gene64593:CDS |
| TCTTGACGGAGGAGTCCATG+TGG | 0.677184 | 5.3:+76238755 | None:intergenic |
| GTAATGCCTAGCAGTCACAT+GGG | 0.677357 | 5.3:-76239825 | MS.gene64593:CDS |
| GTTGGGTTCAAAGCTCACAT+CGG | 0.677716 | 5.3:-76236779 | MS.gene64593:CDS |
| CTCATATAATCTCTTGACGG+AGG | 0.678019 | 5.3:+76238744 | None:intergenic |
| TCATTGACTTCAGATATACA+AGG | 0.680138 | 5.3:+76237219 | None:intergenic |
| TTTGCAATATCAGAGTGACT+AGG | 0.684493 | 5.3:+76238819 | None:intergenic |
| GGAGGCGGAATTGAAACGAG+TGG | 0.684533 | 5.3:-76241251 | MS.gene64593:CDS |
| GCATTACACCAGAAACAATG+GGG | 0.686510 | 5.3:+76239841 | None:intergenic |
| TCCCAAACCAGAAACGACCA+AGG | 0.689587 | 5.3:-76236733 | MS.gene64593:CDS |
| GGAGGAGAATGAGAATTCGG+AGG | 0.690570 | 5.3:-76241269 | MS.gene64593:CDS |
| AGAAGCGAGGACGAAGCTGG+CGG | 0.699972 | 5.3:-76241146 | MS.gene64593:CDS |
| TAATGCCTAGCAGTCACATG+GGG | 0.703271 | 5.3:-76239824 | MS.gene64593:CDS |
| GAGTGACTAGGTATCAAAGG+AGG | 0.704439 | 5.3:+76238831 | None:intergenic |
| CATTACACCAGAAACAATGG+GGG | 0.706770 | 5.3:+76239842 | None:intergenic |
| GTGGGAAGATTCCAAAACTG+GGG | 0.708638 | 5.3:-76237304 | MS.gene64593:CDS |
| CCACCGGAGATTGAAAACGG+AGG | 0.714102 | 5.3:-76241334 | MS.gene64593:CDS |
| TGATTGGTACTGGAACCAGT+TGG | 0.722677 | 5.3:+76238384 | None:intergenic |
| GTGTGAGCTCACTGTCAGTG+AGG | 0.735809 | 5.3:-76238700 | MS.gene64593:CDS |
| ATTACACCAGAAACAATGGG+GGG | 0.773168 | 5.3:+76239843 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTAATGATTAATGAT+TGG | - | chr5.3:76240429-76240448 | MS.gene64593:intron | 10.0% |
| !! | TTTATATCTATAAATTCATA+TGG | - | chr5.3:76241291-76241310 | MS.gene64593:CDS | 10.0% |
| !! | CTACAAATAATATAAAATGA+AGG | + | chr5.3:76238533-76238552 | None:intergenic | 15.0% |
| !! | CTTTATTATTAGTAATCAAA+AGG | - | chr5.3:76239822-76239841 | MS.gene64593:CDS | 15.0% |
| !! | TAATCTTAAATTACCTTATT+GGG | - | chr5.3:76237556-76237575 | MS.gene64593:intron | 15.0% |
| !! | TTAATCTTAAATTACCTTAT+TGG | - | chr5.3:76237555-76237574 | MS.gene64593:intron | 15.0% |
| !!! | CTTCATTTTATATTATTTGT+AGG | - | chr5.3:76238531-76238550 | MS.gene64593:CDS | 15.0% |
| !!! | GTAGTTTTTTCTTTTTAATT+GGG | - | chr5.3:76237279-76237298 | MS.gene64593:CDS | 15.0% |
| !!! | TAATTTAAGATTAAAATGAG+TGG | + | chr5.3:76237549-76237568 | None:intergenic | 15.0% |
| !!! | TAGTTTTTTCTTTTTAATTG+GGG | - | chr5.3:76237280-76237299 | MS.gene64593:CDS | 15.0% |
| !!! | TATCTTTTTTTATTTCTAGA+TGG | - | chr5.3:76237739-76237758 | MS.gene64593:CDS | 15.0% |
| !!! | TGTAGTTTTTTCTTTTTAAT+TGG | - | chr5.3:76237278-76237297 | MS.gene64593:CDS | 15.0% |
| !!! | TTTTTAGTTAATAGTGTATT+GGG | - | chr5.3:76237107-76237126 | MS.gene64593:intron | 15.0% |
| !!! | TTTTTTAGTTAATAGTGTAT+TGG | - | chr5.3:76237106-76237125 | MS.gene64593:intron | 15.0% |
| !! | AAATCACAATAGTAATTGTA+AGG | + | chr5.3:76240406-76240425 | None:intergenic | 20.0% |
| !! | AATATATCATCGTATGATTT+GGG | + | chr5.3:76241153-76241172 | None:intergenic | 20.0% |
| !! | ATGTATGTAGTCTTTATTAT+AGG | + | chr5.3:76240251-76240270 | None:intergenic | 20.0% |
| !! | TATTTACATAGATGACATAT+GGG | + | chr5.3:76240883-76240902 | None:intergenic | 20.0% |
| !!! | AATATTTTGTGTTAAATAGG+CGG | - | chr5.3:76237390-76237409 | MS.gene64593:intron | 20.0% |
| !!! | AATTTTAATCCCTTGATTAT+AGG | + | chr5.3:76241264-76241283 | None:intergenic | 20.0% |
| !!! | ACCAAAATCAATGTAATTTT+AGG | + | chr5.3:76240784-76240803 | None:intergenic | 20.0% |
| !!! | AGTTTTTTCTTTTTAATTGG+GGG | - | chr5.3:76237281-76237300 | MS.gene64593:CDS | 20.0% |
| !!! | ATTTTAATCCCTTGATTATA+GGG | + | chr5.3:76241263-76241282 | None:intergenic | 20.0% |
| !!! | CACAATATTTTGTGTTAAAT+AGG | - | chr5.3:76237387-76237406 | MS.gene64593:intron | 20.0% |
| !!! | CCAAAATCAATGTAATTTTA+GGG | + | chr5.3:76240783-76240802 | None:intergenic | 20.0% |
| !!! | TGTAAATCTTCATTTAAAAC+TGG | - | chr5.3:76240667-76240686 | MS.gene64593:intron | 20.0% |
| !!! | TTTTAGTTAATAGTGTATTG+GGG | - | chr5.3:76237108-76237127 | MS.gene64593:intron | 20.0% |
| ! | AAAAAAGATAGCAGAAGAAA+CGG | + | chr5.3:76237729-76237748 | None:intergenic | 25.0% |
| ! | AATTGAATGAACCTAGAAAT+TGG | - | chr5.3:76240275-76240294 | MS.gene64593:intron | 25.0% |
| ! | AGATTTAATCCCTATAATCA+AGG | - | chr5.3:76241251-76241270 | MS.gene64593:CDS | 25.0% |
| ! | AGTTATAATCCCTTGATTAT+AGG | + | chr5.3:76240968-76240987 | None:intergenic | 25.0% |
| ! | ATATACAATGTTGTCAATTG+CGG | - | chr5.3:76237028-76237047 | MS.gene64593:intron | 25.0% |
| ! | ATTCAATAACAAATTCCAGT+TGG | - | chr5.3:76241044-76241063 | MS.gene64593:CDS | 25.0% |
| ! | CACAAAATATTGTGAAATAC+CGG | + | chr5.3:76237381-76237400 | None:intergenic | 25.0% |
| ! | CTATTTACATAGATGACATA+TGG | + | chr5.3:76240884-76240903 | None:intergenic | 25.0% |
| ! | GAATATATCATCGTATGATT+TGG | + | chr5.3:76241154-76241173 | None:intergenic | 25.0% |
| ! | GATTTAATCCCTATAATCAA+GGG | - | chr5.3:76241252-76241271 | MS.gene64593:CDS | 25.0% |
| ! | GTAACAAGAAATAAACTGAA+AGG | + | chr5.3:76237527-76237546 | None:intergenic | 25.0% |
| ! | GTTATAATCCCTTGATTATA+GGG | + | chr5.3:76240967-76240986 | None:intergenic | 25.0% |
| ! | TAAGCAAAAATCCAATTTCT+AGG | + | chr5.3:76240289-76240308 | None:intergenic | 25.0% |
| ! | TAGAAATGTATCAGAAAACA+AGG | - | chr5.3:76238820-76238839 | MS.gene64593:CDS | 25.0% |
| ! | TATACACTGTTGTTAAATAG+AGG | + | chr5.3:76237179-76237198 | None:intergenic | 25.0% |
| ! | TTAAATAGGAACAAATCTCT+TGG | + | chr5.3:76240505-76240524 | None:intergenic | 25.0% |
| ! | TTACTCATATAATCTCTTGA+CGG | + | chr5.3:76239103-76239122 | None:intergenic | 25.0% |
| ! | TTCAATAACAAATTCCAGTT+GGG | - | chr5.3:76241045-76241064 | MS.gene64593:CDS | 25.0% |
| ! | TTTAGTTAATAGTGTATTGG+GGG | - | chr5.3:76237109-76237128 | MS.gene64593:intron | 25.0% |
| !! | ACATGGACTGAAAATTAAAT+AGG | + | chr5.3:76240519-76240538 | None:intergenic | 25.0% |
| !! | GAATTCATAATAGAGTTGAT+TGG | - | chr5.3:76239239-76239258 | MS.gene64593:intron | 25.0% |
| !! | TTCATTTCCTTATTTCATCT+AGG | - | chr5.3:76241171-76241190 | MS.gene64593:CDS | 25.0% |
| !! | TTTTTGCTTATATTAGTGAC+CGG | - | chr5.3:76240299-76240318 | MS.gene64593:intron | 25.0% |
| !!! | AAAATTTGGTGATGTAATTG+AGG | + | chr5.3:76239335-76239354 | None:intergenic | 25.0% |
| !!! | ATTTAATTTTCAGTCCATGT+GGG | - | chr5.3:76240519-76240538 | MS.gene64593:intron | 25.0% |
| !!! | CCCTAAAATTACATTGATTT+TGG | - | chr5.3:76240780-76240799 | MS.gene64593:intron | 25.0% |
| !!! | CTTTTTTTATTTCTAGATGG+AGG | - | chr5.3:76237742-76237761 | MS.gene64593:CDS | 25.0% |
| !!! | GTTTTTTCTTTTTAATTGGG+GGG | - | chr5.3:76237282-76237301 | MS.gene64593:CDS | 25.0% |
| !!! | TATTTAATTTTCAGTCCATG+TGG | - | chr5.3:76240518-76240537 | MS.gene64593:intron | 25.0% |
| AACCTGAAAGTTCAATACAT+TGG | - | chr5.3:76238389-76238408 | MS.gene64593:CDS | 30.0% | |
| AAGGAGAAAATACAACTGAA+GGG | + | chr5.3:76238514-76238533 | None:intergenic | 30.0% | |
| AATCAAAAGGAATCTCATGA+AGG | - | chr5.3:76239835-76239854 | MS.gene64593:CDS | 30.0% | |
| AATTGCATAAGAAGTAGCAA+AGG | + | chr5.3:76237255-76237274 | None:intergenic | 30.0% | |
| AGTTGAATCCCTATAATCAA+GGG | - | chr5.3:76240956-76240975 | MS.gene64593:intron | 30.0% | |
| ATCATCTACAGTAGTTTGAT+TGG | - | chr5.3:76241357-76241376 | MS.gene64593:CDS | 30.0% | |
| ATTCACCTATGAAATTGCAA+AGG | - | chr5.3:76240339-76240358 | MS.gene64593:intron | 30.0% | |
| CAAGTGTGAAAATTTGTCAT+TGG | - | chr5.3:76240737-76240756 | MS.gene64593:intron | 30.0% | |
| CCAACAATGTTGTTAAATAG+CGG | + | chr5.3:76237452-76237471 | None:intergenic | 30.0% | |
| CGCTATTTAACAACATTGTT+GGG | - | chr5.3:76237450-76237469 | MS.gene64593:intron | 30.0% | |
| CTAAACTGTAGCAAATTCAT+TGG | - | chr5.3:76238736-76238755 | MS.gene64593:CDS | 30.0% | |
| CTATAAATTCATATGGCTGA+AGG | - | chr5.3:76241298-76241317 | MS.gene64593:CDS | 30.0% | |
| CTATTTAACAACATTGTTGG+GGG | - | chr5.3:76237452-76237471 | MS.gene64593:intron | 30.0% | |
| GCTATTTAACAACATTGTTG+GGG | - | chr5.3:76237451-76237470 | MS.gene64593:intron | 30.0% | |
| GTATTTGTTCGCAAAATCAA+AGG | - | chr5.3:76236857-76236876 | MS.gene64593:intron | 30.0% | |
| TAAGCAAAAATCCACTTTCT+AGG | - | chr5.3:76240200-76240219 | MS.gene64593:intron | 30.0% | |
| TAATTGCTTGCGTTAAGTAT+TGG | - | chr5.3:76237493-76237512 | MS.gene64593:intron | 30.0% | |
| TACTCTAAACAACTGTTGAT+TGG | - | chr5.3:76240818-76240837 | MS.gene64593:intron | 30.0% | |
| TATATAATTCTGATGCCATC+AGG | - | chr5.3:76240918-76240937 | MS.gene64593:intron | 30.0% | |
| TATTGAATGAACCTAGAAAG+TGG | + | chr5.3:76240214-76240233 | None:intergenic | 30.0% | |
| TATTTAACAACATTGTTGGG+GGG | - | chr5.3:76237453-76237472 | MS.gene64593:intron | 30.0% | |
| TCATCAATTCCATATTCCAA+GGG | - | chr5.3:76238156-76238175 | MS.gene64593:CDS | 30.0% | |
| TGAGATGTATATGTTGTAGA+AGG | + | chr5.3:76237788-76237807 | None:intergenic | 30.0% | |
| TGCTGAACAAATAGATTCTA+AGG | - | chr5.3:76239642-76239661 | MS.gene64593:intron | 30.0% | |
| TGGCATCAGAATTATATACA+AGG | + | chr5.3:76240916-76240935 | None:intergenic | 30.0% | |
| TTACTTGCCTAGATGAAATA+AGG | + | chr5.3:76241181-76241200 | None:intergenic | 30.0% | |
| TTCAATACATTGGTGTATCT+AGG | - | chr5.3:76238399-76238418 | MS.gene64593:CDS | 30.0% | |
| TTCAATGCTAGATGAAATGT+TGG | + | chr5.3:76239539-76239558 | None:intergenic | 30.0% | |
| TTCACCTATGAAATTGCAAA+GGG | - | chr5.3:76240340-76240359 | MS.gene64593:intron | 30.0% | |
| TTTCAGACTCTTGAAAAACA+AGG | + | chr5.3:76238473-76238492 | None:intergenic | 30.0% | |
| ! | TGCGGATTGTAGAAAAATAA+TGG | - | chr5.3:76237046-76237065 | MS.gene64593:intron | 30.0% |
| ! | TTGTATATCTGAAGTCAATG+AGG | - | chr5.3:76240624-76240643 | MS.gene64593:intron | 30.0% |
| !! | AGATTCAGAAGTATCTTTAC+AGG | + | chr5.3:76239674-76239693 | None:intergenic | 30.0% |
| !! | CATTTGTTGTTAACATCTGT+GGG | + | chr5.3:76239426-76239445 | None:intergenic | 30.0% |
| !! | GAGCATTTGTTTGTTGTTTA+TGG | - | chr5.3:76237663-76237682 | MS.gene64593:intron | 30.0% |
| !! | TCATTGACTTCAGATATACA+AGG | + | chr5.3:76240625-76240644 | None:intergenic | 30.0% |
| !!! | ATGGGTTTTTAACTTTCTAC+TGG | - | chr5.3:76238580-76238599 | MS.gene64593:CDS | 30.0% |
| !!! | TGGGTTTTTAACTTTCTACT+GGG | - | chr5.3:76238581-76238600 | MS.gene64593:CDS | 30.0% |
| AAAATACAACTGAAGGGAGA+GGG | + | chr5.3:76238508-76238527 | None:intergenic | 35.0% | |
| ACATTTCTACCTAATGACAC+AGG | + | chr5.3:76238809-76238828 | None:intergenic | 35.0% | |
| ACTAACACCTTCTAAACTTC+AGG | - | chr5.3:76240107-76240126 | MS.gene64593:intron | 35.0% | |
| ATCAAAATGTTCCCACTGTA+TGG | - | chr5.3:76238225-76238244 | MS.gene64593:CDS | 35.0% | |
| ATGTTCAAAACACCATACAG+TGG | + | chr5.3:76238240-76238259 | None:intergenic | 35.0% | |
| ATTTATACAAGTACACCCTC+CGG | + | chr5.3:76240321-76240340 | None:intergenic | 35.0% | |
| CACCAATGTATTGAACTTTC+AGG | + | chr5.3:76238394-76238413 | None:intergenic | 35.0% | |
| CATCAATTCCATATTCCAAG+GGG | - | chr5.3:76238157-76238176 | MS.gene64593:CDS | 35.0% | |
| CATTCTATAATCTCTCCTGA+TGG | + | chr5.3:76240936-76240955 | None:intergenic | 35.0% | |
| CCACAGATGTTAACAACAAA+TGG | - | chr5.3:76239424-76239443 | MS.gene64593:intron | 35.0% | |
| CCGCTATTTAACAACATTGT+TGG | - | chr5.3:76237449-76237468 | MS.gene64593:intron | 35.0% | |
| CTCATCAATTCCATATTCCA+AGG | - | chr5.3:76238155-76238174 | MS.gene64593:CDS | 35.0% | |
| CTGCAGTAACTTTAAACTGT+GGG | + | chr5.3:76238081-76238100 | None:intergenic | 35.0% | |
| CTTGTATATCTCTCGTATCT+GGG | + | chr5.3:76239513-76239532 | None:intergenic | 35.0% | |
| GAAGGAGAAAATACAACTGA+AGG | + | chr5.3:76238515-76238534 | None:intergenic | 35.0% | |
| GAGTTGAATCCCTATAATCA+AGG | - | chr5.3:76240955-76240974 | MS.gene64593:intron | 35.0% | |
| GCAGATTTCACACATATGTT+TGG | + | chr5.3:76239583-76239602 | None:intergenic | 35.0% | |
| GCTGAATTAGAGGGAAAATT+TGG | + | chr5.3:76239349-76239368 | None:intergenic | 35.0% | |
| GCTTTGGTATTAACAACTTC+TGG | + | chr5.3:76239054-76239073 | None:intergenic | 35.0% | |
| GGAAATTTACAATCATCACC+AGG | - | chr5.3:76239730-76239749 | MS.gene64593:CDS | 35.0% | |
| TAGGCCATTCATTACTCAAA+CGG | - | chr5.3:76238931-76238950 | MS.gene64593:CDS | 35.0% | |
| TAGTCACTCTGATATTGCAA+AGG | - | chr5.3:76239024-76239043 | MS.gene64593:CDS | 35.0% | |
| TATGCCCTTTGCAATTTCAT+AGG | + | chr5.3:76240347-76240366 | None:intergenic | 35.0% | |
| TATGGAATTGATGAGAAGCT+TGG | + | chr5.3:76238150-76238169 | None:intergenic | 35.0% | |
| TGAATACCAGCTGAATTAGA+GGG | + | chr5.3:76239358-76239377 | None:intergenic | 35.0% | |
| TGAATTCCTCTAATGACTGA+TGG | + | chr5.3:76239226-76239245 | None:intergenic | 35.0% | |
| TGACATTTCAGTCATAGAAG+TGG | - | chr5.3:76238692-76238711 | MS.gene64593:CDS | 35.0% | |
| TGATCTTGGATTGAATGCTA+AGG | - | chr5.3:76236782-76236801 | MS.gene64593:intron | 35.0% | |
| TGCATAGTAGACATATTTCC+AGG | + | chr5.3:76238959-76238978 | None:intergenic | 35.0% | |
| TGTGAGTTGCGATAATGAAT+TGG | + | chr5.3:76240719-76240738 | None:intergenic | 35.0% | |
| TGTGGAAATTGGAGAAAGTA+TGG | - | chr5.3:76238561-76238580 | MS.gene64593:CDS | 35.0% | |
| TGTTCAAAACACCATACAGT+GGG | + | chr5.3:76238239-76238258 | None:intergenic | 35.0% | |
| TTATTTGTAGGTGAACGTTG+TGG | - | chr5.3:76238543-76238562 | MS.gene64593:CDS | 35.0% | |
| TTCACACATATGTTTGGATC+AGG | + | chr5.3:76239577-76239596 | None:intergenic | 35.0% | |
| TTCTTTCGTAATCTAGCAGT+TGG | - | chr5.3:76240148-76240167 | MS.gene64593:intron | 35.0% | |
| TTGAATACCAGCTGAATTAG+AGG | + | chr5.3:76239359-76239378 | None:intergenic | 35.0% | |
| TTGTATATCTCTCGTATCTG+GGG | + | chr5.3:76239512-76239531 | None:intergenic | 35.0% | |
| TTTGCAATATCAGAGTGACT+AGG | + | chr5.3:76239025-76239044 | None:intergenic | 35.0% | |
| ! | AATTTTCCCTCTAATTCAGC+TGG | - | chr5.3:76239349-76239368 | MS.gene64593:intron | 35.0% |
| ! | CGCGTCTTTTTCTTCTTAAA+TGG | - | chr5.3:76240690-76240709 | MS.gene64593:intron | 35.0% |
| ! | CTAAACAACTGTTGATTGGT+TGG | - | chr5.3:76240822-76240841 | MS.gene64593:intron | 35.0% |
| ! | GCATTGATGGAGTAACATAT+AGG | - | chr5.3:76240046-76240065 | MS.gene64593:CDS | 35.0% |
| ! | GTGGAAATTGGAGAAAGTAT+GGG | - | chr5.3:76238562-76238581 | MS.gene64593:CDS | 35.0% |
| !! | AAGATGAGGATAAGAGTGTT+AGG | - | chr5.3:76237228-76237247 | MS.gene64593:CDS | 35.0% |
| !! | CCATTTGTTGTTAACATCTG+TGG | + | chr5.3:76239427-76239446 | None:intergenic | 35.0% |
| !! | TGTATGGTGTTTTGAACATG+TGG | - | chr5.3:76238241-76238260 | MS.gene64593:CDS | 35.0% |
| !! | TGTTTGTTGTTTATGGCATG+TGG | - | chr5.3:76237670-76237689 | MS.gene64593:intron | 35.0% |
| AAAGAAGCCAACTGATGTTG+AGG | - | chr5.3:76236659-76236678 | MS.gene64593:intron | 40.0% | |
| AAAGTTACTGCAGGATTGAG+TGG | - | chr5.3:76238088-76238107 | MS.gene64593:CDS | 40.0% | |
| AACATTCGAACAGCAGTTGT+TGG | + | chr5.3:76237854-76237873 | None:intergenic | 40.0% | |
| AAGCCTTTGCCTCCAAAATA+TGG | - | chr5.3:76239295-76239314 | MS.gene64593:intron | 40.0% | |
| AAGTTACTGCAGGATTGAGT+GGG | - | chr5.3:76238089-76238108 | MS.gene64593:CDS | 40.0% | |
| AATGCCTTCTACAGTTTCCA+TGG | - | chr5.3:76237901-76237920 | MS.gene64593:CDS | 40.0% | |
| AATGGAAACTCTGTTCCAAC+TGG | - | chr5.3:76239442-76239461 | MS.gene64593:intron | 40.0% | |
| AATTGCAGTGTATGTGTTGC+TGG | - | chr5.3:76236940-76236959 | MS.gene64593:intron | 40.0% | |
| ACAACTTGCGTTTCCTGTTT+AGG | - | chr5.3:76240376-76240395 | MS.gene64593:intron | 40.0% | |
| ACCAGATAACTTAGATCCGA+AGG | - | chr5.3:76239396-76239415 | MS.gene64593:intron | 40.0% | |
| ACCTTCGGATCTAAGTTATC+TGG | + | chr5.3:76239400-76239419 | None:intergenic | 40.0% | |
| AGGCATTACACCAGAAACAA+TGG | + | chr5.3:76238005-76238024 | None:intergenic | 40.0% | |
| AGGCCATTCATTACTCAAAC+GGG | - | chr5.3:76238932-76238951 | MS.gene64593:CDS | 40.0% | |
| ATAGCTCACATGCTGTAGAA+TGG | - | chr5.3:76239971-76239990 | MS.gene64593:CDS | 40.0% | |
| ATATCTGAGCTGGCTAAAAG+TGG | - | chr5.3:76239709-76239728 | MS.gene64593:intron | 40.0% | |
| ATGTGGGAAGATTCCAAAAC+TGG | - | chr5.3:76240535-76240554 | MS.gene64593:intron | 40.0% | |
| ATTACACCAGAAACAATGGG+GGG | + | chr5.3:76238001-76238020 | None:intergenic | 40.0% | |
| ATTGCTCCGAAGGATATTGT+TGG | - | chr5.3:76236732-76236751 | MS.gene64593:CDS | 40.0% | |
| ATTGTAAGGTTCGCCTAAAC+AGG | + | chr5.3:76240392-76240411 | None:intergenic | 40.0% | |
| CAACCCTTTCAAACAAACAC+CGG | - | chr5.3:76237806-76237825 | MS.gene64593:CDS | 40.0% | |
| CATAACTCTGTCAAGGTTGA+AGG | - | chr5.3:76238851-76238870 | MS.gene64593:CDS | 40.0% | |
| CATTACACCAGAAACAATGG+GGG | + | chr5.3:76238002-76238021 | None:intergenic | 40.0% | |
| CCAGAACCTCTAACAGAATT+CGG | + | chr5.3:76239910-76239929 | None:intergenic | 40.0% | |
| CCAGATACGAGAGATATACA+AGG | - | chr5.3:76239511-76239530 | MS.gene64593:intron | 40.0% | |
| CCTGCAGTAACTTTAAACTG+TGG | + | chr5.3:76238082-76238101 | None:intergenic | 40.0% | |
| CCTTGTATATCTCTCGTATC+TGG | + | chr5.3:76239514-76239533 | None:intergenic | 40.0% | |
| CTCAGTATTGTGATTGGTAC+TGG | + | chr5.3:76239470-76239489 | None:intergenic | 40.0% | |
| CTCATATAATCTCTTGACGG+AGG | + | chr5.3:76239100-76239119 | None:intergenic | 40.0% | |
| CTGGTTGATTGATATTGCGA+TGG | + | chr5.3:76237965-76237984 | None:intergenic | 40.0% | |
| CTTATTGGGAATGCACTTTG+CGG | - | chr5.3:76237570-76237589 | MS.gene64593:intron | 40.0% | |
| GAAAATACAACTGAAGGGAG+AGG | + | chr5.3:76238509-76238528 | None:intergenic | 40.0% | |
| GAGTATGTGTTCAGAAGATG+AGG | - | chr5.3:76237214-76237233 | MS.gene64593:intron | 40.0% | |
| GCATTACACCAGAAACAATG+GGG | + | chr5.3:76238003-76238022 | None:intergenic | 40.0% | |
| GCTATAGCGCAACAGAATAA+CGG | + | chr5.3:76237157-76237176 | None:intergenic | 40.0% | |
| GGAAATTACCTTGAACCTGA+AGG | + | chr5.3:76238126-76238145 | None:intergenic | 40.0% | |
| GGCATTACACCAGAAACAAT+GGG | + | chr5.3:76238004-76238023 | None:intergenic | 40.0% | |
| TAACAGCAGCTCAGAACATT+AGG | - | chr5.3:76238912-76238931 | MS.gene64593:CDS | 40.0% | |
| TAATTGAGGATCGCATCACA+CGG | + | chr5.3:76239321-76239340 | None:intergenic | 40.0% | |
| TACCAATCTTGCTGCATTGA+TGG | - | chr5.3:76240033-76240052 | MS.gene64593:CDS | 40.0% | |
| TAGGTGAACGTTGTGGAAAT+TGG | - | chr5.3:76238550-76238569 | MS.gene64593:CDS | 40.0% | |
| TCACATGCTGTAGAATGGAT+TGG | - | chr5.3:76239976-76239995 | MS.gene64593:CDS | 40.0% | |
| TCACCACCAACAATATCCTT+CGG | + | chr5.3:76236741-76236760 | None:intergenic | 40.0% | |
| TCAGAGTGACTAGGTATCAA+AGG | + | chr5.3:76239016-76239035 | None:intergenic | 40.0% | |
| TCATCTAGGCAAGTAATTCG+TGG | - | chr5.3:76241185-76241204 | MS.gene64593:CDS | 40.0% | |
| TCTTCCTAACATATCTGAGC+TGG | - | chr5.3:76239699-76239718 | MS.gene64593:intron | 40.0% | |
| TGCTTATATTAGTGACCGCA+GGG | + | chr5.3:76240186-76240205 | None:intergenic | 40.0% | |
| TGCTTATATTAGTGACCGGA+GGG | - | chr5.3:76240303-76240322 | MS.gene64593:intron | 40.0% | |
| TGGATTGAATGCTAAGGTTG+TGG | - | chr5.3:76236788-76236807 | MS.gene64593:intron | 40.0% | |
| TGGTTATATCATACACCCTG+CGG | - | chr5.3:76240168-76240187 | MS.gene64593:intron | 40.0% | |
| TGTGGGAAGATTCCAAAACT+GGG | - | chr5.3:76240536-76240555 | MS.gene64593:intron | 40.0% | |
| TTAGCCAGCTCAGATATGTT+AGG | + | chr5.3:76239706-76239725 | None:intergenic | 40.0% | |
| TTCTCAGCAATCGACATCTT+GGG | + | chr5.3:76236837-76236856 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGC+AGG | + | chr5.3:76240187-76240206 | None:intergenic | 40.0% | |
| TTGCTTATATTAGTGACCGG+AGG | - | chr5.3:76240302-76240321 | MS.gene64593:intron | 40.0% | |
| TTGCTTGCCTGAAGTTTAGA+AGG | + | chr5.3:76240117-76240136 | None:intergenic | 40.0% | |
| ! | AACTGTGGGTTTTCAACTCT+AGG | + | chr5.3:76238067-76238086 | None:intergenic | 40.0% |
| ! | ATGAAGTGCTTGGGTTTAAG+CGG | - | chr5.3:76239268-76239287 | MS.gene64593:intron | 40.0% |
| ! | CAAGTGAAATCCCTTTTCAC+AGG | + | chr5.3:76239191-76239210 | None:intergenic | 40.0% |
| ! | CCACAGTTTAAAGTTACTGC+AGG | - | chr5.3:76238079-76238098 | MS.gene64593:CDS | 40.0% |
| ! | CTACTTTCCTGATGATTTGC+CGG | - | chr5.3:76240585-76240604 | MS.gene64593:intron | 40.0% |
| ! | GGGGTATTTGAGTCAAATGA+CGG | + | chr5.3:76239493-76239512 | None:intergenic | 40.0% |
| ! | GGTAGTGTGATTGATGATCT+TGG | - | chr5.3:76236768-76236787 | MS.gene64593:CDS | 40.0% |
| ! | TACTTTCCTGATGATTTGCC+GGG | - | chr5.3:76240586-76240605 | MS.gene64593:intron | 40.0% |
| ! | TCTGGTTTCTTCTCTGAAGA+TGG | + | chr5.3:76239382-76239401 | None:intergenic | 40.0% |
| !! | AAGGAGCATTCACTGATGAT+TGG | + | chr5.3:76238766-76238785 | None:intergenic | 40.0% |
| !! | ATTGTTGGTGGTGAAGCTAT+TGG | - | chr5.3:76236747-76236766 | MS.gene64593:CDS | 40.0% |
| !! | GGTTCTGGAACTAATACTGA+AGG | - | chr5.3:76239922-76239941 | MS.gene64593:CDS | 40.0% |
| !! | TAGAAGGTGTTAGTTTGCCA+TGG | + | chr5.3:76240101-76240120 | None:intergenic | 40.0% |
| !!! | AGGTGCTTTTGAGGTTATTG+AGG | - | chr5.3:76238419-76238438 | MS.gene64593:CDS | 40.0% |
| !!! | AGTTTTGGAATCTTCCCACA+TGG | + | chr5.3:76240536-76240555 | None:intergenic | 40.0% |
| !!! | TGCTTTTGAGGTTATTGAGG+TGG | - | chr5.3:76238422-76238441 | MS.gene64593:CDS | 40.0% |
| !!! | TGTTTTGGTGTTATCGACGA+TGG | - | chr5.3:76236620-76236639 | MS.gene64593:intron | 40.0% |
| AAACCAGAAACGACCAAGGT+CGG | - | chr5.3:76241112-76241131 | MS.gene64593:CDS | 45.0% | |
| AAGGTTGTGGATCAGAGGTT+AGG | - | chr5.3:76236801-76236820 | MS.gene64593:intron | 45.0% | |
| AATTCGGTTGTGCAGCATCT+AGG | + | chr5.3:76239894-76239913 | None:intergenic | 45.0% | |
| ACCTTGACAGAGTTATGAGC+AGG | + | chr5.3:76238848-76238867 | None:intergenic | 45.0% | |
| ACGATTGTCAACCATTCCAC+CGG | + | chr5.3:76237828-76237847 | None:intergenic | 45.0% | |
| AGAAGATCCTGCAGCAAGAT+GGG | + | chr5.3:76237939-76237958 | None:intergenic | 45.0% | |
| AGCTCAACCTCAACATCAGT+TGG | + | chr5.3:76236669-76236688 | None:intergenic | 45.0% | |
| AGGTTGTGGATCAGAGGTTA+GGG | - | chr5.3:76236802-76236821 | MS.gene64593:intron | 45.0% | |
| AGTTACTGCAGGATTGAGTG+GGG | - | chr5.3:76238090-76238109 | MS.gene64593:CDS | 45.0% | |
| AGTTGAGAATGCAGTGTCAC+AGG | - | chr5.3:76239759-76239778 | MS.gene64593:CDS | 45.0% | |
| ATATTCCCCGGCAAATCATC+AGG | + | chr5.3:76240595-76240614 | None:intergenic | 45.0% | |
| ATGCACTTTGCGGAGTTTGT+TGG | - | chr5.3:76237580-76237599 | MS.gene64593:intron | 45.0% | |
| ATGCTAAGGTTGTGGATCAG+AGG | - | chr5.3:76236796-76236815 | MS.gene64593:intron | 45.0% | |
| ATTCCAAAACTGGGGTGAAG+TGG | - | chr5.3:76240545-76240564 | MS.gene64593:intron | 45.0% | |
| CAAATTCAGCTACGCAACAG+TGG | - | chr5.3:76237347-76237366 | MS.gene64593:intron | 45.0% | |
| CAAGGATGACCAATATTCCC+CGG | + | chr5.3:76240607-76240626 | None:intergenic | 45.0% | |
| CAATTCCATATTCCAAGGGG+TGG | - | chr5.3:76238160-76238179 | MS.gene64593:CDS | 45.0% | |
| CATCAGTGAATGCTCCTTCA+TGG | - | chr5.3:76238768-76238787 | MS.gene64593:CDS | 45.0% | |
| CCACCGGTGTTTGTTTGAAA+GGG | + | chr5.3:76237812-76237831 | None:intergenic | 45.0% | |
| CCGAATTCTGTTAGAGGTTC+TGG | - | chr5.3:76239907-76239926 | MS.gene64593:CDS | 45.0% | |
| CCTTGAACCTGAAGGACATA+AGG | + | chr5.3:76238118-76238137 | None:intergenic | 45.0% | |
| CGCAAAGTGCATTCCCAATA+AGG | + | chr5.3:76237572-76237591 | None:intergenic | 45.0% | |
| CTAGGCAATGCTACAGAAGA+TGG | + | chr5.3:76238049-76238068 | None:intergenic | 45.0% | |
| CTCCATCAATGCAGCAAGAT+TGG | + | chr5.3:76240038-76240057 | None:intergenic | 45.0% | |
| CTCTGTGATGCCTGTGAAAA+GGG | - | chr5.3:76239178-76239197 | MS.gene64593:intron | 45.0% | |
| CTTCTCAGCAATCGACATCT+TGG | + | chr5.3:76236838-76236857 | None:intergenic | 45.0% | |
| GAGTGACTAGGTATCAAAGG+AGG | + | chr5.3:76239013-76239032 | None:intergenic | 45.0% | |
| GCACAACCGAATTCTGTTAG+AGG | - | chr5.3:76239901-76239920 | MS.gene64593:CDS | 45.0% | |
| GCATTCTCAACTTGAGAACC+TGG | + | chr5.3:76239751-76239770 | None:intergenic | 45.0% | |
| GGAATTGATGAGAAGCTTGG+TGG | + | chr5.3:76238147-76238166 | None:intergenic | 45.0% | |
| GGAGTAACATATAGGCTGCA+AGG | - | chr5.3:76240054-76240073 | MS.gene64593:CDS | 45.0% | |
| GGTCCCGTTTGAGTAATGAA+TGG | + | chr5.3:76238938-76238957 | None:intergenic | 45.0% | |
| GGTGGAGGAGAATGAGAATT+CGG | - | chr5.3:76236569-76236588 | MS.gene64593:intron | 45.0% | |
| GTAATGCCTAGCAGTCACAT+GGG | - | chr5.3:76238016-76238035 | MS.gene64593:CDS | 45.0% | |
| GTGGGAAGATTCCAAAACTG+GGG | - | chr5.3:76240537-76240556 | MS.gene64593:intron | 45.0% | |
| GTTGGGTTCAAAGCTCACAT+CGG | - | chr5.3:76241062-76241081 | MS.gene64593:CDS | 45.0% | |
| TAATGCCTAGCAGTCACATG+GGG | - | chr5.3:76238017-76238036 | MS.gene64593:CDS | 45.0% | |
| TCAAACAAACACCGGTGGAA+TGG | - | chr5.3:76237814-76237833 | MS.gene64593:CDS | 45.0% | |
| TCCACCGGTGTTTGTTTGAA+AGG | + | chr5.3:76237813-76237832 | None:intergenic | 45.0% | |
| TCTCTGTGATGCCTGTGAAA+AGG | - | chr5.3:76239177-76239196 | MS.gene64593:intron | 45.0% | |
| TGACGGCTCAGTATTGTGAT+TGG | + | chr5.3:76239476-76239495 | None:intergenic | 45.0% | |
| TGCTGATGCAACCGTATCAA+GGG | - | chr5.3:76238877-76238896 | MS.gene64593:CDS | 45.0% | |
| TGTAATGCCTAGCAGTCACA+TGG | - | chr5.3:76238015-76238034 | MS.gene64593:CDS | 45.0% | |
| TTCATTACTCAAACGGGACC+TGG | - | chr5.3:76238938-76238957 | MS.gene64593:CDS | 45.0% | |
| TTCCAAAACTGGGGTGAAGT+GGG | - | chr5.3:76240546-76240565 | MS.gene64593:intron | 45.0% | |
| ! | ACTTTCCTGATGATTTGCCG+GGG | - | chr5.3:76240587-76240606 | MS.gene64593:intron | 45.0% |
| ! | CAGACTCAACCTGTGTCATT+AGG | - | chr5.3:76238797-76238816 | MS.gene64593:CDS | 45.0% |
| ! | CCTTATGTCCTTCAGGTTCA+AGG | - | chr5.3:76238115-76238134 | MS.gene64593:CDS | 45.0% |
| ! | GATGATTTGCCGGGGAATAT+TGG | - | chr5.3:76240595-76240614 | MS.gene64593:intron | 45.0% |
| ! | GGTGTATCTAGGTGCTTTTG+AGG | - | chr5.3:76238410-76238429 | MS.gene64593:CDS | 45.0% |
| ! | TGAGTCTGTACTGACCATGA+AGG | + | chr5.3:76238785-76238804 | None:intergenic | 45.0% |
| ! | TGATTGGTACTGGAACCAGT+TGG | + | chr5.3:76239460-76239479 | None:intergenic | 45.0% |
| ! | TGTTGTCGATTGTGGATGGT+GGG | - | chr5.3:76237308-76237327 | MS.gene64593:CDS | 45.0% |
| ! | TTCTGAGCTGCTGTTACTTG+TGG | + | chr5.3:76238908-76238927 | None:intergenic | 45.0% |
| !! | ACCTTGGTCGTTTCTGGTTT+GGG | + | chr5.3:76241112-76241131 | None:intergenic | 45.0% |
| !! | ATCACACGGCCATATTTTGG+AGG | + | chr5.3:76239307-76239326 | None:intergenic | 45.0% |
| !! | ATGTGAGCTTTGAACCCAAC+TGG | + | chr5.3:76241062-76241081 | None:intergenic | 45.0% |
| !! | CTGTAGAAGGCATTGATGTG+TGG | + | chr5.3:76237895-76237914 | None:intergenic | 45.0% |
| !! | GGGACACTAGGGTTTTATCA+GGG | + | chr5.3:76241092-76241111 | None:intergenic | 45.0% |
| !! | GGTGTTTTGAACATGTGGTG+TGG | - | chr5.3:76238246-76238265 | MS.gene64593:CDS | 45.0% |
| !! | GTTTCTGGTTTGGGACACTA+GGG | + | chr5.3:76241103-76241122 | None:intergenic | 45.0% |
| !! | TGGGACACTAGGGTTTTATC+AGG | + | chr5.3:76241093-76241112 | None:intergenic | 45.0% |
| !! | TGTGGATGGTGGGAAAATAG+CGG | - | chr5.3:76237318-76237337 | MS.gene64593:intron | 45.0% |
| AACCAGAAACGACCAAGGTC+GGG | - | chr5.3:76241113-76241132 | MS.gene64593:CDS | 50.0% | |
| AAGCTGGCGGTACTATGTCA+AGG | - | chr5.3:76236708-76236727 | MS.gene64593:CDS | 50.0% | |
| AAGTGCTTGGGTTTAAGCGG+TGG | - | chr5.3:76239271-76239290 | MS.gene64593:intron | 50.0% | |
| ACCATATTCCCACCCTGCAA+CGG | + | chr5.3:76238986-76239005 | None:intergenic | 50.0% | |
| AGCTGGCGGTACTATGTCAA+GGG | - | chr5.3:76236709-76236728 | MS.gene64593:CDS | 50.0% | |
| AGCTTCCTGATCATCCCACA+TGG | - | chr5.3:76239071-76239090 | MS.gene64593:CDS | 50.0% | |
| ATGTCAAGGGATTGCTCCGA+AGG | - | chr5.3:76236722-76236741 | MS.gene64593:CDS | 50.0% | |
| CAGAAGATCCTGCAGCAAGA+TGG | + | chr5.3:76237940-76237959 | None:intergenic | 50.0% | |
| CCCTTTCAAACAAACACCGG+TGG | - | chr5.3:76237809-76237828 | MS.gene64593:CDS | 50.0% | |
| CTCTAATGACTGATGGCTGC+AGG | + | chr5.3:76239219-76239238 | None:intergenic | 50.0% | |
| CTGCAGCCATCAGTCATTAG+AGG | - | chr5.3:76239217-76239236 | MS.gene64593:intron | 50.0% | |
| CTGCTGATGCAACCGTATCA+AGG | - | chr5.3:76238876-76238895 | MS.gene64593:CDS | 50.0% | |
| GAAGATCCTGCAGCAAGATG+GGG | + | chr5.3:76237938-76237957 | None:intergenic | 50.0% | |
| GACGCCATGGAAACTGTAGA+AGG | + | chr5.3:76237908-76237927 | None:intergenic | 50.0% | |
| GCCTGCTCATAACTCTGTCA+AGG | - | chr5.3:76238844-76238863 | MS.gene64593:CDS | 50.0% | |
| GCTCCGAAGGATATTGTTGG+TGG | - | chr5.3:76236735-76236754 | MS.gene64593:CDS | 50.0% | |
| GGAGAATGAGAATTCGGAGG+CGG | - | chr5.3:76236575-76236594 | MS.gene64593:intron | 50.0% | |
| GGAGGAGAATGAGAATTCGG+AGG | - | chr5.3:76236572-76236591 | MS.gene64593:intron | 50.0% | |
| GGTTCAAAGCTCACATCGGT+TGG | - | chr5.3:76241066-76241085 | MS.gene64593:CDS | 50.0% | |
| GTGGGATGATCAGGAAGCTT+TGG | + | chr5.3:76239070-76239089 | None:intergenic | 50.0% | |
| TCCCAAACCAGAAACGACCA+AGG | - | chr5.3:76241108-76241127 | MS.gene64593:CDS | 50.0% | |
| TGCAGGGTGGGAATATGGTT+CGG | - | chr5.3:76238987-76239006 | MS.gene64593:CDS | 50.0% | |
| TGGATCAGGCTTCTCGTCAA+TGG | + | chr5.3:76239563-76239582 | None:intergenic | 50.0% | |
| TTCCATATTCCAAGGGGTGG+TGG | - | chr5.3:76238163-76238182 | MS.gene64593:CDS | 50.0% | |
| TTGAGCTGATGAGAGAAGCG+AGG | - | chr5.3:76236682-76236701 | MS.gene64593:CDS | 50.0% | |
| TTGTGGACCTGCCCTTGATA+CGG | + | chr5.3:76238891-76238910 | None:intergenic | 50.0% | |
| TTTCTCCCCATGTGACTGCT+AGG | + | chr5.3:76238025-76238044 | None:intergenic | 50.0% | |
| ! | AACATCTGTGGGCTGACCTT+CGG | + | chr5.3:76239415-76239434 | None:intergenic | 50.0% |
| ! | AACCCACTTCACCCCAGTTT+TGG | + | chr5.3:76240551-76240570 | None:intergenic | 50.0% |
| ! | CCTCCTCCGTTTTCAATCTC+CGG | + | chr5.3:76236513-76236532 | None:intergenic | 50.0% |
| ! | CGCAACAGTGGTTCTATTGC+CGG | - | chr5.3:76237359-76237378 | MS.gene64593:intron | 50.0% |
| ! | CGCATCACACGGCCATATTT+TGG | + | chr5.3:76239310-76239329 | None:intergenic | 50.0% |
| ! | GCAGTGTTGTCGATTGTGGA+TGG | - | chr5.3:76237304-76237323 | MS.gene64593:CDS | 50.0% |
| ! | GCATTTTTCACGTCCAGCCA+TGG | - | chr5.3:76240081-76240100 | MS.gene64593:CDS | 50.0% |
| ! | GTGTTGTCGATTGTGGATGG+TGG | - | chr5.3:76237307-76237326 | MS.gene64593:CDS | 50.0% |
| ! | TGGCACTGCATGAAGTGCTT+GGG | - | chr5.3:76239259-76239278 | MS.gene64593:intron | 50.0% |
| ! | TTGGCACTGCATGAAGTGCT+TGG | - | chr5.3:76239258-76239277 | MS.gene64593:intron | 50.0% |
| !! | AACTGGGGTGAAGTGGGTTA+AGG | - | chr5.3:76240552-76240571 | MS.gene64593:intron | 50.0% |
| !! | ACGAGTGGCGGAGATTGTTT+TGG | - | chr5.3:76236605-76236624 | MS.gene64593:intron | 50.0% |
| !! | AGGTGTTAGTTTGCCATGGC+TGG | + | chr5.3:76240097-76240116 | None:intergenic | 50.0% |
| !! | CGGCCATATTTTGGAGGCAA+AGG | + | chr5.3:76239301-76239320 | None:intergenic | 50.0% |
| !! | CGTTTCTGGTTTGGGACACT+AGG | + | chr5.3:76241104-76241123 | None:intergenic | 50.0% |
| !! | GACCTTGGTCGTTTCTGGTT+TGG | + | chr5.3:76241113-76241132 | None:intergenic | 50.0% |
| !! | GTGGATGGTGGGAAAATAGC+GGG | - | chr5.3:76237319-76237338 | MS.gene64593:intron | 50.0% |
| AATGTACCTCCACCACCCCT+TGG | + | chr5.3:76238175-76238194 | None:intergenic | 55.0% | |
| ACTATGCACCAGCCGTTGCA+GGG | - | chr5.3:76238971-76238990 | MS.gene64593:CDS | 55.0% | |
| AGAGGAGCGGTTGAGCAAGA+AGG | - | chr5.3:76236542-76236561 | MS.gene64593:intron | 55.0% | |
| CCACCGGAGATTGAAAACGG+AGG | - | chr5.3:76236507-76236526 | MS.gene64593:CDS | 55.0% | |
| CCGCCACCGGAGATTGAAAA+CGG | - | chr5.3:76236504-76236523 | MS.gene64593:CDS | 55.0% | |
| CCGGAGATTGAAAACGGAGG+AGG | - | chr5.3:76236510-76236529 | MS.gene64593:CDS | 55.0% | |
| CTCCACCACCCCTTGGAATA+TGG | + | chr5.3:76238168-76238187 | None:intergenic | 55.0% | |
| CTTGACGGAGGAGTCCATGT+GGG | + | chr5.3:76239088-76239107 | None:intergenic | 55.0% | |
| GAGGAGAGCAACAAGAGGAG+CGG | - | chr5.3:76236529-76236548 | MS.gene64593:intron | 55.0% | |
| GATGCAACCGTATCAAGGGC+AGG | - | chr5.3:76238881-76238900 | MS.gene64593:CDS | 55.0% | |
| GCAGCTTGTAGTGCTTCCAC+TGG | - | chr5.3:76239601-76239620 | MS.gene64593:intron | 55.0% | |
| GGAGGCGGAATTGAAACGAG+TGG | - | chr5.3:76236590-76236609 | MS.gene64593:intron | 55.0% | |
| GGAGTCCATGTGGGATGATC+AGG | + | chr5.3:76239079-76239098 | None:intergenic | 55.0% | |
| GGCGGAATTGAAACGAGTGG+CGG | - | chr5.3:76236593-76236612 | MS.gene64593:intron | 55.0% | |
| GTGAGACCCCCCATTGTTTC+TGG | - | chr5.3:76237992-76238011 | MS.gene64593:CDS | 55.0% | |
| GTGTGAGCTCACTGTCAGTG+AGG | - | chr5.3:76239141-76239160 | MS.gene64593:intron | 55.0% | |
| GTTGAGCAAGAAGGCGAAGG+TGG | - | chr5.3:76236551-76236570 | MS.gene64593:intron | 55.0% | |
| TACTATGCACCAGCCGTTGC+AGG | - | chr5.3:76238970-76238989 | MS.gene64593:CDS | 55.0% | |
| TCTTGACGGAGGAGTCCATG+TGG | + | chr5.3:76239089-76239108 | None:intergenic | 55.0% | |
| TGGGGCTCCTTATGTCCTTC+AGG | - | chr5.3:76238108-76238127 | MS.gene64593:CDS | 55.0% | |
| ! | CATATTCCAAGGGGTGGTGG+AGG | - | chr5.3:76238166-76238185 | MS.gene64593:CDS | 55.0% |
| ! | CCGTTTTCAATCTCCGGTGG+CGG | + | chr5.3:76236507-76236526 | None:intergenic | 55.0% |
| ! | CCTCCGTTTTCAATCTCCGG+TGG | + | chr5.3:76236510-76236529 | None:intergenic | 55.0% |
| ACGATGGCGACGATGCGAAG+TGG | - | chr5.3:76236636-76236655 | MS.gene64593:intron | 60.0% | |
| AGAAGCGAGGACGAAGCTGG+CGG | - | chr5.3:76236695-76236714 | MS.gene64593:CDS | 60.0% | |
| AGTGCTTCCACTGGCGTGCA+GGG | - | chr5.3:76239610-76239629 | MS.gene64593:intron | 60.0% | |
| ATGCCTCCCCATCTTGCTGC+AGG | - | chr5.3:76237929-76237948 | MS.gene64593:CDS | 60.0% | |
| CGGAGGAGGAGAGCAACAAG+AGG | - | chr5.3:76236524-76236543 | MS.gene64593:CDS | 60.0% | |
| GAGAGAAGCGAGGACGAAGC+TGG | - | chr5.3:76236692-76236711 | MS.gene64593:CDS | 60.0% | |
| GAGCAAGAAGGCGAAGGTGG+AGG | - | chr5.3:76236554-76236573 | MS.gene64593:intron | 60.0% | |
| GATCCTGCAGCAAGATGGGG+AGG | + | chr5.3:76237935-76237954 | None:intergenic | 60.0% | |
| GCCGTTGCAGGGTGGGAATA+TGG | - | chr5.3:76238982-76239001 | MS.gene64593:CDS | 60.0% | |
| GCGGTTGAGCAAGAAGGCGA+AGG | - | chr5.3:76236548-76236567 | MS.gene64593:intron | 60.0% | |
| GGGGGGTCTCACTTCATTGC+TGG | + | chr5.3:76237984-76238003 | None:intergenic | 60.0% | |
| GTCCCGACCTTGGTCGTTTC+TGG | + | chr5.3:76241118-76241137 | None:intergenic | 60.0% | |
| TAGTGCTTCCACTGGCGTGC+AGG | - | chr5.3:76239609-76239628 | MS.gene64593:intron | 60.0% | |
| TATTCCCACCCTGCAACGGC+TGG | + | chr5.3:76238982-76239001 | None:intergenic | 60.0% | |
| ! | ATGGGGAGGCATAGACGCCA+TGG | + | chr5.3:76237921-76237940 | None:intergenic | 60.0% |
| ! | GGGGGCAGTGTTGTCGATTG+TGG | - | chr5.3:76237300-76237319 | MS.gene64593:CDS | 60.0% |
| !! | TAGTGCTGACGTCCCGACCT+TGG | + | chr5.3:76241128-76241147 | None:intergenic | 60.0% |
| !! | TCCAGCATCGGTTCCGACAC+AGG | + | chr5.3:76236483-76236502 | None:intergenic | 60.0% |
| ACCGATGCTGGATCCGCCAC+CGG | - | chr5.3:76236491-76236510 | MS.gene64593:CDS | 65.0% | |
| ACCTTCACCCTGCACGCCAG+TGG | + | chr5.3:76239620-76239639 | None:intergenic | 65.0% | |
| ATGCACCAGCCGTTGCAGGG+TGG | - | chr5.3:76238974-76238993 | MS.gene64593:CDS | 65.0% | |
| GCCTGTGTCGGAACCGATGC+TGG | - | chr5.3:76236479-76236498 | MS.gene64593:CDS | 65.0% | |
| TCCACTGGCGTGCAGGGTGA+AGG | - | chr5.3:76239616-76239635 | MS.gene64593:intron | 65.0% | |
| TGCACCAGCCGTTGCAGGGT+GGG | - | chr5.3:76238975-76238994 | MS.gene64593:CDS | 65.0% | |
| !! | TCCGGTGGCGGATCCAGCAT+CGG | + | chr5.3:76236495-76236514 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 76236468 | 76241395 | 76236468 | ID=MS.gene64593 |
| chr5.3 | mRNA | 76236468 | 76241395 | 76236468 | ID=MS.gene64593.t1;Parent=MS.gene64593 |
| chr5.3 | exon | 76240985 | 76241395 | 76240985 | ID=MS.gene64593.t1.exon1;Parent=MS.gene64593.t1 |
| chr5.3 | CDS | 76240985 | 76241395 | 76240985 | ID=cds.MS.gene64593.t1;Parent=MS.gene64593.t1 |
| chr5.3 | exon | 76239727 | 76240105 | 76239727 | ID=MS.gene64593.t1.exon2;Parent=MS.gene64593.t1 |
| chr5.3 | CDS | 76239727 | 76240105 | 76239727 | ID=cds.MS.gene64593.t1;Parent=MS.gene64593.t1 |
| chr5.3 | exon | 76237735 | 76239116 | 76237735 | ID=MS.gene64593.t1.exon3;Parent=MS.gene64593.t1 |
| chr5.3 | CDS | 76237735 | 76239116 | 76237735 | ID=cds.MS.gene64593.t1;Parent=MS.gene64593.t1 |
| chr5.3 | exon | 76237218 | 76237331 | 76237218 | ID=MS.gene64593.t1.exon4;Parent=MS.gene64593.t1 |
| chr5.3 | CDS | 76237218 | 76237331 | 76237218 | ID=cds.MS.gene64593.t1;Parent=MS.gene64593.t1 |
| chr5.3 | exon | 76236667 | 76236800 | 76236667 | ID=MS.gene64593.t1.exon5;Parent=MS.gene64593.t1 |
| chr5.3 | CDS | 76236667 | 76236800 | 76236667 | ID=cds.MS.gene64593.t1;Parent=MS.gene64593.t1 |
| chr5.3 | exon | 76236468 | 76236543 | 76236468 | ID=MS.gene64593.t1.exon6;Parent=MS.gene64593.t1 |
| chr5.3 | CDS | 76236468 | 76236543 | 76236468 | ID=cds.MS.gene64593.t1;Parent=MS.gene64593.t1 |
| Gene Sequence |
| Protein sequence |
