Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65017.t1 | XP_024636633.1 | 78.8 | 736 | 18 | 1 | 1 | 598 | 1 | 736 | 0.00E+00 | 1135.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65017.t1 | Q9SWG3 | 36.1 | 710 | 287 | 7 | 3 | 560 | 8 | 702 | 7.3e-120 | 432.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65017.t1 | A0A2K3NBU0 | 63.0 | 702 | 118 | 3 | 4 | 567 | 3 | 700 | 1.2e-245 | 858.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene65017.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65017.t1 | MTR_1g008290 | 69.286 | 140 | 40 | 1 | 94 | 233 | 8 | 144 | 7.58e-67 | 214 |
MS.gene65017.t1 | MTR_5g032260 | 64.486 | 107 | 38 | 0 | 68 | 174 | 299 | 405 | 5.49e-39 | 148 |
MS.gene65017.t1 | MTR_4g035820 | 27.960 | 397 | 257 | 10 | 2 | 374 | 33 | 424 | 7.71e-31 | 128 |
MS.gene65017.t1 | MTR_1g070355 | 27.413 | 259 | 166 | 8 | 4 | 248 | 36 | 286 | 4.00e-22 | 100 |
MS.gene65017.t1 | MTR_5g076070 | 27.237 | 257 | 157 | 10 | 25 | 264 | 33 | 276 | 2.91e-21 | 94.7 |
MS.gene65017.t1 | MTR_6g051425 | 24.576 | 236 | 154 | 5 | 43 | 264 | 19 | 244 | 3.35e-21 | 95.5 |
MS.gene65017.t1 | MTR_0402s0040 | 24.906 | 265 | 142 | 5 | 41 | 298 | 26 | 240 | 9.37e-21 | 96.3 |
MS.gene65017.t1 | MTR_7g446520 | 28.685 | 251 | 149 | 7 | 10 | 251 | 58 | 287 | 1.78e-20 | 93.6 |
MS.gene65017.t1 | MTR_2g098880 | 35.849 | 106 | 62 | 1 | 40 | 139 | 60 | 165 | 3.75e-18 | 84.7 |
MS.gene65017.t1 | MTR_2g098880 | 35.849 | 106 | 62 | 1 | 40 | 139 | 72 | 177 | 4.30e-18 | 85.1 |
MS.gene65017.t1 | MTR_1g013060 | 29.808 | 208 | 135 | 6 | 40 | 237 | 23 | 229 | 1.71e-16 | 79.3 |
MS.gene65017.t1 | MTR_7g446480 | 33.858 | 127 | 83 | 1 | 123 | 248 | 151 | 277 | 2.89e-16 | 80.5 |
MS.gene65017.t1 | MTR_7g446510 | 32.308 | 130 | 87 | 1 | 123 | 251 | 166 | 295 | 1.41e-15 | 78.6 |
MS.gene65017.t1 | MTR_4g067290 | 34.513 | 113 | 69 | 2 | 33 | 141 | 48 | 159 | 7.81e-15 | 74.7 |
MS.gene65017.t1 | MTR_4g067290 | 34.513 | 113 | 69 | 2 | 33 | 141 | 48 | 159 | 7.93e-15 | 74.7 |
MS.gene65017.t1 | MTR_4g067290 | 34.513 | 113 | 69 | 2 | 33 | 141 | 68 | 179 | 9.32e-15 | 75.1 |
MS.gene65017.t1 | MTR_4g067290 | 34.513 | 113 | 69 | 2 | 33 | 141 | 66 | 177 | 9.65e-15 | 74.7 |
MS.gene65017.t1 | MTR_4g067290 | 34.513 | 113 | 69 | 2 | 33 | 141 | 68 | 179 | 1.01e-14 | 74.7 |
MS.gene65017.t1 | MTR_4g067290 | 34.513 | 113 | 69 | 2 | 33 | 141 | 108 | 219 | 1.73e-14 | 74.7 |
MS.gene65017.t1 | MTR_3g006370 | 33.945 | 109 | 67 | 1 | 36 | 139 | 45 | 153 | 3.31e-14 | 72.8 |
MS.gene65017.t1 | MTR_2g098920 | 32.639 | 144 | 83 | 3 | 11 | 141 | 41 | 183 | 4.78e-13 | 70.1 |
MS.gene65017.t1 | MTR_7g446060 | 35.294 | 85 | 55 | 0 | 122 | 206 | 6 | 90 | 1.62e-11 | 62.8 |
MS.gene65017.t1 | MTR_5g015480 | 32.000 | 125 | 79 | 3 | 41 | 159 | 56 | 180 | 3.94e-11 | 64.3 |
MS.gene65017.t1 | MTR_8g465780 | 33.981 | 103 | 67 | 1 | 270 | 371 | 1 | 103 | 7.06e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene65017.t1 | AT4G15090 | 41.899 | 358 | 179 | 8 | 217 | 560 | 360 | 702 | 2.20e-83 | 278 |
MS.gene65017.t1 | AT4G15090 | 44.487 | 263 | 128 | 4 | 3 | 251 | 8 | 266 | 1.28e-62 | 221 |
MS.gene65017.t1 | AT4G15090 | 41.899 | 358 | 179 | 8 | 217 | 560 | 360 | 702 | 2.20e-83 | 278 |
MS.gene65017.t1 | AT4G15090 | 44.487 | 263 | 128 | 4 | 3 | 251 | 8 | 266 | 1.28e-62 | 221 |
MS.gene65017.t1 | AT4G15090 | 41.899 | 358 | 179 | 8 | 217 | 560 | 360 | 702 | 2.20e-83 | 278 |
MS.gene65017.t1 | AT4G15090 | 44.487 | 263 | 128 | 4 | 3 | 251 | 8 | 266 | 1.28e-62 | 221 |
MS.gene65017.t1 | AT4G15090 | 41.899 | 358 | 179 | 8 | 217 | 560 | 360 | 702 | 2.20e-83 | 278 |
MS.gene65017.t1 | AT4G15090 | 44.487 | 263 | 128 | 4 | 3 | 251 | 8 | 266 | 1.28e-62 | 221 |
MS.gene65017.t1 | AT4G15090 | 41.899 | 358 | 179 | 8 | 217 | 560 | 360 | 702 | 2.20e-83 | 278 |
MS.gene65017.t1 | AT4G15090 | 44.487 | 263 | 128 | 4 | 3 | 251 | 8 | 266 | 1.28e-62 | 221 |
MS.gene65017.t1 | AT3G22170 | 46.043 | 278 | 133 | 2 | 247 | 516 | 409 | 677 | 2.78e-80 | 270 |
MS.gene65017.t1 | AT3G22170 | 40.684 | 263 | 109 | 4 | 14 | 251 | 35 | 275 | 1.18e-53 | 196 |
MS.gene65017.t1 | AT3G22170 | 46.043 | 278 | 133 | 2 | 247 | 516 | 409 | 677 | 2.78e-80 | 270 |
MS.gene65017.t1 | AT3G22170 | 40.684 | 263 | 109 | 4 | 14 | 251 | 35 | 275 | 1.18e-53 | 196 |
MS.gene65017.t1 | AT1G76320 | 45.149 | 268 | 145 | 1 | 251 | 518 | 341 | 606 | 2.14e-76 | 256 |
MS.gene65017.t1 | AT1G76320 | 43.891 | 221 | 113 | 3 | 45 | 264 | 1 | 211 | 1.56e-52 | 191 |
MS.gene65017.t1 | AT1G76320 | 45.149 | 268 | 145 | 1 | 251 | 518 | 341 | 606 | 2.43e-76 | 257 |
MS.gene65017.t1 | AT1G76320 | 43.891 | 221 | 113 | 3 | 45 | 264 | 1 | 211 | 1.87e-52 | 192 |
MS.gene65017.t1 | AT1G76320 | 45.149 | 268 | 145 | 1 | 251 | 518 | 341 | 606 | 2.76e-76 | 257 |
MS.gene65017.t1 | AT1G76320 | 43.891 | 221 | 113 | 3 | 45 | 264 | 1 | 211 | 2.07e-52 | 192 |
MS.gene65017.t1 | AT1G76320 | 45.149 | 268 | 145 | 1 | 251 | 518 | 341 | 606 | 2.76e-76 | 257 |
MS.gene65017.t1 | AT1G76320 | 43.891 | 221 | 113 | 3 | 45 | 264 | 1 | 211 | 2.07e-52 | 192 |
MS.gene65017.t1 | AT4G19990 | 43.985 | 266 | 146 | 2 | 247 | 509 | 291 | 556 | 6.71e-61 | 214 |
MS.gene65017.t1 | AT4G19990 | 30.729 | 192 | 81 | 3 | 78 | 252 | 1 | 157 | 7.52e-20 | 94.4 |
MS.gene65017.t1 | AT4G19990 | 43.985 | 266 | 146 | 2 | 247 | 509 | 348 | 613 | 1.14e-60 | 215 |
MS.gene65017.t1 | AT4G19990 | 34.783 | 230 | 98 | 3 | 40 | 252 | 20 | 214 | 2.40e-32 | 133 |
MS.gene65017.t1 | AT4G19990 | 43.985 | 266 | 146 | 2 | 247 | 509 | 348 | 613 | 1.14e-60 | 215 |
MS.gene65017.t1 | AT4G19990 | 34.783 | 230 | 98 | 3 | 40 | 252 | 20 | 214 | 2.40e-32 | 133 |
MS.gene65017.t1 | AT4G19990 | 43.985 | 266 | 146 | 2 | 247 | 509 | 348 | 613 | 1.31e-60 | 215 |
MS.gene65017.t1 | AT4G19990 | 34.783 | 230 | 98 | 3 | 40 | 252 | 20 | 214 | 3.08e-32 | 132 |
MS.gene65017.t1 | AT4G19990 | 43.985 | 266 | 146 | 2 | 247 | 509 | 348 | 613 | 1.89e-60 | 215 |
MS.gene65017.t1 | AT4G19990 | 34.783 | 230 | 98 | 3 | 40 | 252 | 20 | 214 | 3.60e-32 | 132 |
MS.gene65017.t1 | AT4G19990 | 43.985 | 266 | 146 | 2 | 247 | 509 | 348 | 613 | 1.89e-60 | 215 |
MS.gene65017.t1 | AT4G19990 | 34.783 | 230 | 98 | 3 | 40 | 252 | 20 | 214 | 3.60e-32 | 132 |
MS.gene65017.t1 | AT4G19990 | 43.985 | 266 | 146 | 2 | 247 | 509 | 362 | 627 | 2.15e-60 | 214 |
MS.gene65017.t1 | AT4G19990 | 34.783 | 230 | 98 | 3 | 40 | 252 | 34 | 228 | 2.51e-32 | 133 |
MS.gene65017.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 317 | 619 | 7.17e-55 | 199 |
MS.gene65017.t1 | AT2G32250 | 43.541 | 209 | 78 | 4 | 44 | 251 | 41 | 210 | 1.18e-37 | 149 |
MS.gene65017.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 317 | 619 | 7.17e-55 | 199 |
MS.gene65017.t1 | AT2G32250 | 43.541 | 209 | 78 | 4 | 44 | 251 | 41 | 210 | 1.18e-37 | 149 |
MS.gene65017.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 317 | 619 | 8.40e-55 | 199 |
MS.gene65017.t1 | AT2G32250 | 43.541 | 209 | 78 | 4 | 44 | 251 | 41 | 210 | 1.19e-37 | 149 |
MS.gene65017.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 317 | 619 | 8.54e-55 | 199 |
MS.gene65017.t1 | AT2G32250 | 43.541 | 209 | 78 | 4 | 44 | 251 | 41 | 210 | 1.29e-37 | 149 |
MS.gene65017.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 317 | 619 | 8.54e-55 | 199 |
MS.gene65017.t1 | AT2G32250 | 43.541 | 209 | 78 | 4 | 44 | 251 | 41 | 210 | 1.29e-37 | 149 |
MS.gene65017.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 317 | 619 | 8.54e-55 | 199 |
MS.gene65017.t1 | AT2G32250 | 43.541 | 209 | 78 | 4 | 44 | 251 | 41 | 210 | 1.29e-37 | 149 |
MS.gene65017.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 276 | 578 | 8.84e-55 | 199 |
MS.gene65017.t1 | AT2G32250 | 43.269 | 208 | 78 | 4 | 45 | 251 | 1 | 169 | 8.81e-37 | 146 |
MS.gene65017.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 276 | 578 | 9.48e-55 | 199 |
MS.gene65017.t1 | AT2G32250 | 43.269 | 208 | 78 | 4 | 45 | 251 | 1 | 169 | 8.32e-37 | 146 |
MS.gene65017.t1 | AT4G38180 | 35.018 | 277 | 169 | 3 | 252 | 522 | 429 | 700 | 2.60e-51 | 189 |
MS.gene65017.t1 | AT4G38180 | 36.481 | 233 | 134 | 4 | 40 | 264 | 72 | 298 | 9.99e-37 | 146 |
MS.gene65017.t1 | AT2G27110 | 36.029 | 272 | 169 | 4 | 249 | 517 | 228 | 497 | 3.30e-50 | 185 |
MS.gene65017.t1 | AT2G27110 | 36.431 | 269 | 166 | 4 | 252 | 517 | 376 | 642 | 9.04e-50 | 185 |
MS.gene65017.t1 | AT2G27110 | 28.571 | 217 | 129 | 6 | 37 | 251 | 45 | 237 | 2.54e-19 | 92.8 |
MS.gene65017.t1 | AT2G27110 | 36.431 | 269 | 166 | 4 | 252 | 517 | 376 | 642 | 9.04e-50 | 185 |
MS.gene65017.t1 | AT2G27110 | 28.571 | 217 | 129 | 6 | 37 | 251 | 45 | 237 | 2.54e-19 | 92.8 |
MS.gene65017.t1 | AT1G52520 | 35.357 | 280 | 169 | 4 | 246 | 513 | 419 | 698 | 4.80e-49 | 182 |
MS.gene65017.t1 | AT1G52520 | 30.385 | 260 | 162 | 4 | 2 | 251 | 38 | 288 | 1.30e-26 | 115 |
MS.gene65017.t1 | AT4G38170 | 34.831 | 267 | 164 | 6 | 252 | 511 | 194 | 457 | 1.51e-46 | 172 |
MS.gene65017.t1 | AT1G80010 | 32.342 | 269 | 169 | 5 | 252 | 511 | 450 | 714 | 4.08e-36 | 144 |
MS.gene65017.t1 | AT1G80010 | 32.759 | 232 | 142 | 4 | 41 | 264 | 95 | 320 | 3.25e-27 | 117 |
MS.gene65017.t1 | AT3G06250 | 31.970 | 269 | 173 | 4 | 246 | 509 | 496 | 759 | 6.60e-34 | 138 |
MS.gene65017.t1 | AT3G06250 | 27.888 | 251 | 130 | 5 | 18 | 252 | 152 | 367 | 7.97e-21 | 97.4 |
MS.gene65017.t1 | AT3G06250 | 32.381 | 105 | 62 | 1 | 34 | 138 | 21 | 116 | 4.01e-11 | 66.6 |
MS.gene65017.t1 | AT3G06250 | 31.970 | 269 | 173 | 4 | 246 | 509 | 496 | 759 | 6.60e-34 | 138 |
MS.gene65017.t1 | AT3G06250 | 27.888 | 251 | 130 | 5 | 18 | 252 | 152 | 367 | 7.97e-21 | 97.4 |
MS.gene65017.t1 | AT3G06250 | 32.381 | 105 | 62 | 1 | 34 | 138 | 21 | 116 | 4.01e-11 | 66.6 |
MS.gene65017.t1 | AT3G06250 | 31.970 | 269 | 173 | 4 | 246 | 509 | 496 | 759 | 6.60e-34 | 138 |
MS.gene65017.t1 | AT3G06250 | 27.888 | 251 | 130 | 5 | 18 | 252 | 152 | 367 | 7.97e-21 | 97.4 |
MS.gene65017.t1 | AT3G06250 | 32.381 | 105 | 62 | 1 | 34 | 138 | 21 | 116 | 4.01e-11 | 66.6 |
MS.gene65017.t1 | AT5G18960 | 32.342 | 269 | 172 | 5 | 246 | 509 | 520 | 783 | 1.52e-33 | 137 |
MS.gene65017.t1 | AT5G18960 | 28.632 | 234 | 130 | 5 | 22 | 252 | 192 | 391 | 5.74e-20 | 94.7 |
MS.gene65017.t1 | AT5G18960 | 32.773 | 119 | 71 | 1 | 20 | 138 | 22 | 131 | 5.97e-13 | 72.4 |
MS.gene65017.t1 | AT5G18960 | 32.342 | 269 | 172 | 5 | 246 | 509 | 520 | 783 | 1.52e-33 | 137 |
MS.gene65017.t1 | AT5G18960 | 28.632 | 234 | 130 | 5 | 22 | 252 | 192 | 391 | 5.74e-20 | 94.7 |
MS.gene65017.t1 | AT5G18960 | 32.773 | 119 | 71 | 1 | 20 | 138 | 22 | 131 | 5.97e-13 | 72.4 |
MS.gene65017.t1 | AT1G10240 | 27.723 | 202 | 142 | 1 | 252 | 453 | 407 | 604 | 1.46e-21 | 99.8 |
MS.gene65017.t1 | AT1G10240 | 25.641 | 273 | 180 | 9 | 5 | 264 | 14 | 276 | 2.03e-19 | 92.8 |
MS.gene65017.t1 | AT1G10240 | 27.723 | 202 | 142 | 1 | 252 | 453 | 407 | 604 | 1.46e-21 | 99.8 |
MS.gene65017.t1 | AT1G10240 | 25.641 | 273 | 180 | 9 | 5 | 264 | 14 | 276 | 2.03e-19 | 92.8 |
MS.gene65017.t1 | AT3G07500 | 38.235 | 136 | 77 | 3 | 12 | 140 | 1 | 136 | 4.37e-16 | 78.2 |
MS.gene65017.t1 | AT3G59470 | 32.117 | 137 | 87 | 3 | 8 | 141 | 40 | 173 | 1.07e-15 | 77.8 |
MS.gene65017.t1 | AT3G59470 | 32.117 | 137 | 87 | 3 | 8 | 141 | 40 | 173 | 1.07e-15 | 77.8 |
MS.gene65017.t1 | AT3G59470 | 32.117 | 137 | 87 | 3 | 8 | 141 | 52 | 185 | 1.36e-15 | 77.8 |
MS.gene65017.t1 | AT5G28530 | 25.101 | 247 | 152 | 10 | 41 | 264 | 55 | 291 | 7.82e-14 | 75.1 |
MS.gene65017.t1 | AT5G28530 | 27.064 | 218 | 130 | 5 | 249 | 454 | 419 | 619 | 1.93e-13 | 73.9 |
MS.gene65017.t1 | AT5G28530 | 25.101 | 247 | 152 | 10 | 41 | 264 | 55 | 291 | 8.87e-14 | 75.1 |
MS.gene65017.t1 | AT5G28530 | 25.688 | 218 | 129 | 5 | 249 | 454 | 419 | 615 | 1.75e-12 | 70.9 |
MS.gene65017.t1 | AT5G28530 | 25.101 | 247 | 152 | 10 | 41 | 264 | 55 | 291 | 8.87e-14 | 75.1 |
MS.gene65017.t1 | AT5G28530 | 25.688 | 218 | 129 | 5 | 249 | 454 | 419 | 615 | 1.75e-12 | 70.9 |
MS.gene65017.t1 | AT2G43280 | 32.692 | 104 | 65 | 1 | 40 | 138 | 21 | 124 | 1.23e-13 | 70.5 |
MS.gene65017.t1 | AT5G28530 | 27.064 | 218 | 130 | 5 | 249 | 454 | 356 | 556 | 1.42e-13 | 74.3 |
MS.gene65017.t1 | AT4G12850 | 35.455 | 110 | 67 | 2 | 30 | 138 | 3 | 109 | 1.59e-13 | 68.6 |
MS.gene65017.t1 | AT4G12850 | 36.000 | 100 | 63 | 1 | 40 | 138 | 10 | 109 | 2.59e-13 | 67.8 |
MS.gene65017.t1 | AT4G12850 | 36.000 | 100 | 63 | 1 | 40 | 138 | 10 | 109 | 3.60e-13 | 68.9 |
MS.gene65017.t1 | AT5G28530 | 25.688 | 218 | 129 | 5 | 249 | 454 | 356 | 552 | 1.11e-12 | 71.2 |
Find 91 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCCACTCTTTATTCTTCT+TGG | 0.122394 | 8.4:-40065730 | None:intergenic |
AAAATATAAAGTTGCTTTAC+AGG | 0.207491 | 8.4:+40065048 | MS.gene65017:CDS |
AACGCCGATCTTTATCTAAA+TGG | 0.218779 | 8.4:-40064268 | None:intergenic |
GAAATTTCAAGTTGAAGTTT+TGG | 0.239158 | 8.4:+40065189 | MS.gene65017:CDS |
TTCATATCCTCCATATTCTT+TGG | 0.259642 | 8.4:-40064213 | None:intergenic |
AAAGAATCTGTGATGGAAAA+TGG | 0.261591 | 8.4:+40064033 | MS.gene65017:CDS |
TATGCTAAGTCAGTTGGATT+TGG | 0.280799 | 8.4:+40063858 | MS.gene65017:CDS |
TTCATGTACCGTTGATTTAG+AGG | 0.293148 | 8.4:+40063761 | MS.gene65017:CDS |
CGGCGTTTGGCTTTAGAATC+AGG | 0.298007 | 8.4:+40064284 | MS.gene65017:CDS |
GCCACAATGGCCAAAGAATA+TGG | 0.298617 | 8.4:+40064203 | MS.gene65017:CDS |
GAGCTTTATTGATTCCTCTA+TGG | 0.299611 | 8.4:-40064124 | None:intergenic |
ATGTAAGAAAACTACATTAA+AGG | 0.307863 | 8.4:+40065015 | MS.gene65017:CDS |
TTGATCTATTTGGAGATGAT+TGG | 0.321918 | 8.4:+40064870 | MS.gene65017:CDS |
ATAATGTGTCATACCATTCT+TGG | 0.328571 | 8.4:-40065957 | None:intergenic |
TCAAACTCCATTCCAATGTT+AGG | 0.334083 | 8.4:-40063801 | None:intergenic |
TTGATGGCATTCCAAGCTAT+TGG | 0.348151 | 8.4:+40065385 | MS.gene65017:CDS |
ATGCTAAGTCAGTTGGATTT+GGG | 0.354359 | 8.4:+40063859 | MS.gene65017:CDS |
AGGTATTTACTGCTTCTCTT+TGG | 0.367389 | 8.4:-40065899 | None:intergenic |
AATGTATCATTCATGTAAAC+AGG | 0.389787 | 8.4:-40064929 | None:intergenic |
GGCACAAGCAACCTGTTCTT+AGG | 0.392197 | 8.4:+40065110 | MS.gene65017:CDS |
GCTATTGAATTTCTCGAAGA+AGG | 0.413131 | 8.4:+40065538 | MS.gene65017:CDS |
AGAAGATGGGTGTTCTAGTA+AGG | 0.420507 | 8.4:+40065489 | MS.gene65017:CDS |
CCTAAAAGAGCAAATACAAA+AGG | 0.426549 | 8.4:+40065703 | MS.gene65017:CDS |
AATGGAGAACATTCTATTGA+TGG | 0.437522 | 8.4:+40063699 | MS.gene65017:CDS |
ATGCTTGCTTCTAACATCCT+TGG | 0.437672 | 8.4:-40065449 | None:intergenic |
ATTGACATTTGCTTCTCAAA+AGG | 0.437914 | 8.4:-40065142 | None:intergenic |
TTTAGATAAAGATCGGCGTT+TGG | 0.438381 | 8.4:+40064271 | MS.gene65017:CDS |
ACAAGGATAATGAAAGAAGA+TGG | 0.442886 | 8.4:+40065475 | MS.gene65017:CDS |
ATATGATTCTTTATATCAAA+AGG | 0.443423 | 8.4:+40065516 | MS.gene65017:CDS |
TCTTTGTAGACATTCATTGA+TGG | 0.446762 | 8.4:+40065369 | MS.gene65017:CDS |
ATATGAAGAACGTGAACATT+GGG | 0.447625 | 8.4:+40064904 | MS.gene65017:CDS |
GGAAAATAATGTGCATATGC+TGG | 0.447627 | 8.4:-40064098 | None:intergenic |
GAATTAATGGAAGTTGTTGA+TGG | 0.448629 | 8.4:+40063675 | None:intergenic |
ATATGAAAACATTGGTTGCT+TGG | 0.449564 | 8.4:+40064229 | MS.gene65017:CDS |
TTCACCATTGAGAACATTTG+AGG | 0.450893 | 8.4:-40065919 | None:intergenic |
AACAACAATTTGAAGATAAG+TGG | 0.469819 | 8.4:+40064828 | MS.gene65017:intron |
TCCATATTCTTTGGCCATTG+TGG | 0.472191 | 8.4:-40064204 | None:intergenic |
AGGAAAGTCATCAGGGTTGA+AGG | 0.473626 | 8.4:+40066058 | MS.gene65017:intron |
TCAATTGCATAAAAGAATCC+TGG | 0.481905 | 8.4:-40064356 | None:intergenic |
AACAGCTGCATTGCCAAGAA+TGG | 0.484562 | 8.4:+40065944 | MS.gene65017:CDS |
AACAATGTGCAACTATCAAC+CGG | 0.485541 | 8.4:+40065617 | MS.gene65017:CDS |
TTCTTAAAATATAGTGTGAT+GGG | 0.486629 | 8.4:-40065420 | None:intergenic |
GGTGATGGAGTCCTAAGAAC+AGG | 0.491171 | 8.4:-40065121 | None:intergenic |
CTAAAAGAGCAAATACAAAA+GGG | 0.494734 | 8.4:+40065704 | MS.gene65017:CDS |
ACTCATTATGCTAAGTCAGT+TGG | 0.500199 | 8.4:+40063852 | MS.gene65017:CDS |
AGGAGATGCAAATGCAATGT+TGG | 0.501317 | 8.4:+40064304 | MS.gene65017:CDS |
ATGGAAGTTGTTGATGGGAA+TGG | 0.507690 | 8.4:+40063681 | MS.gene65017:CDS |
AATACCTCAAATGTTCTCAA+TGG | 0.509038 | 8.4:+40065915 | MS.gene65017:CDS |
TGAAGATAAGTGGCATGAAA+TGG | 0.513482 | 8.4:+40064838 | MS.gene65017:intron |
AGTTATGCTTGCACAAGATA+CGG | 0.514711 | 8.4:+40063936 | MS.gene65017:CDS |
TCAAAGTTTCTTCAAGTGCA+TGG | 0.515683 | 8.4:-40065594 | None:intergenic |
TATATGAAGAACGTGAACAT+TGG | 0.518179 | 8.4:+40064903 | MS.gene65017:CDS |
AAATCCACGTCCTTGTTTGA+AGG | 0.523815 | 8.4:+40063983 | MS.gene65017:CDS |
CTTCTTAAAATATAGTGTGA+TGG | 0.527660 | 8.4:-40065421 | None:intergenic |
ATTGAAACTTTGCACCATGT+TGG | 0.528985 | 8.4:+40064158 | MS.gene65017:CDS |
CGTGTTAAAAGAATCTGTGA+TGG | 0.532867 | 8.4:+40064026 | MS.gene65017:CDS |
TGCTTGTTCTCACTCCAACA+TGG | 0.537475 | 8.4:-40064172 | None:intergenic |
ATTTGCTTCTCAAAAGGTGA+TGG | 0.540522 | 8.4:-40065136 | None:intergenic |
CAACACAGACACCAATAGCT+TGG | 0.542350 | 8.4:-40065396 | None:intergenic |
TCCACGTCCTTGTTTGAAGG+TGG | 0.544839 | 8.4:+40063986 | MS.gene65017:CDS |
AATTAATGGAAGTTGTTGAT+GGG | 0.547188 | 8.4:+40063676 | None:intergenic |
GAAACCATTTAGATAAAGAT+CGG | 0.550718 | 8.4:+40064264 | MS.gene65017:CDS |
TTATTGATTCCTCTATGGCA+AGG | 0.554774 | 8.4:-40064119 | None:intergenic |
ATGGAGAACATTCTATTGAT+GGG | 0.556834 | 8.4:+40063700 | MS.gene65017:CDS |
TATGGAGGATATGAAAACAT+TGG | 0.557417 | 8.4:+40064221 | MS.gene65017:CDS |
CAAGGATAATGAAAGAAGAT+GGG | 0.559117 | 8.4:+40065476 | MS.gene65017:CDS |
CCACGTCCTTGTTTGAAGGT+GGG | 0.564321 | 8.4:+40063987 | MS.gene65017:CDS |
AGGATAGAGAAGAGGCGGAA+AGG | 0.566665 | 8.4:+40065068 | MS.gene65017:CDS |
AGAGTGTGATGTCTCGAAGA+AGG | 0.573703 | 8.4:+40065306 | MS.gene65017:CDS |
TGCTTTACAGGATAGAGAAG+AGG | 0.576377 | 8.4:+40065060 | MS.gene65017:CDS |
TGCAATTGATATGGATGATG+AGG | 0.581691 | 8.4:+40064370 | MS.gene65017:CDS |
TTGTTTGAAGGTGGGATGTG+AGG | 0.585943 | 8.4:+40063995 | MS.gene65017:CDS |
CCCACCTTCAAACAAGGACG+TGG | 0.589716 | 8.4:-40063987 | None:intergenic |
TCACATCCCACCTTCAAACA+AGG | 0.596792 | 8.4:-40063993 | None:intergenic |
TCAAGAACCTAACATTGGAA+TGG | 0.600467 | 8.4:+40063794 | MS.gene65017:CDS |
ATAAAGAGTGGGATCGAGAG+AGG | 0.602973 | 8.4:+40065739 | MS.gene65017:CDS |
GGTGGTCAAGAACCTAACAT+TGG | 0.606305 | 8.4:+40063789 | MS.gene65017:CDS |
AGATAAGTGGCATGAAATGG+TGG | 0.607920 | 8.4:+40064841 | MS.gene65017:intron |
GAATGAAGAGCAAGTTGTCA+AGG | 0.614810 | 8.4:+40063722 | MS.gene65017:CDS |
ACCGTTAGCCTCTAAATCAA+CGG | 0.614838 | 8.4:-40063769 | None:intergenic |
TTAGAAGCAAGCATCATACA+AGG | 0.616240 | 8.4:+40065458 | MS.gene65017:CDS |
AAAATCGACAAGGAAAACGT+TGG | 0.622612 | 8.4:+40065646 | MS.gene65017:CDS |
TAAAAGAGCAAATACAAAAG+GGG | 0.623948 | 8.4:+40065705 | MS.gene65017:CDS |
ACCGTTGATTTAGAGGCTAA+CGG | 0.628314 | 8.4:+40063768 | MS.gene65017:CDS |
CTCCAAGAAGAATAAAGAGT+GGG | 0.644223 | 8.4:+40065728 | MS.gene65017:CDS |
CCGGTCTTTGAAAATCGACA+AGG | 0.646121 | 8.4:+40065636 | MS.gene65017:CDS |
TTTACAGGATAGAGAAGAGG+CGG | 0.651231 | 8.4:+40065063 | MS.gene65017:CDS |
GCAATTGATATGGATGATGA+GGG | 0.673224 | 8.4:+40064371 | MS.gene65017:CDS |
GCTCCAAGAAGAATAAAGAG+TGG | 0.689620 | 8.4:+40065727 | MS.gene65017:CDS |
ACAATGGCCAAAGAATATGG+AGG | 0.745699 | 8.4:+40064206 | MS.gene65017:CDS |
GTTGATTTAGAGGCTAACGG+TGG | 0.762259 | 8.4:+40063771 | MS.gene65017:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATGATTCTTTATATCAAA+AGG | + | chr8.4:40065516-40065535 | MS.gene65017:CDS | 15.0% |
!! | ATCTAGTTGTAAAGTAAAAA+AGG | + | chr8.4:40065774-40065793 | MS.gene65017:CDS | 20.0% |
!! | ATGTAAGAAAACTACATTAA+AGG | + | chr8.4:40065015-40065034 | MS.gene65017:CDS | 20.0% |
!! | TTCTTAAAATATAGTGTGAT+GGG | - | chr8.4:40065423-40065442 | None:intergenic | 20.0% |
!!! | AAAATATAAAGTTGCTTTAC+AGG | + | chr8.4:40065048-40065067 | MS.gene65017:CDS | 20.0% |
!!! | AAATTTCAAGTTGAAGTTTT+GGG | + | chr8.4:40065190-40065209 | MS.gene65017:CDS | 20.0% |
!!! | ATTCTTTTATGCAATTGATA+TGG | + | chr8.4:40064361-40064380 | MS.gene65017:CDS | 20.0% |
!!! | TACATGAATGATACATTTTT+TGG | + | chr8.4:40064935-40064954 | MS.gene65017:CDS | 20.0% |
!!! | TTTGTTTTCTTATTTTTCAC+AGG | + | chr8.4:40066038-40066057 | MS.gene65017:intron | 20.0% |
! | AACAACAATTTGAAGATAAG+TGG | + | chr8.4:40064828-40064847 | MS.gene65017:intron | 25.0% |
! | AATGTATCATTCATGTAAAC+AGG | - | chr8.4:40064932-40064951 | None:intergenic | 25.0% |
! | ACATATGCATATATAAGTCT+TGG | + | chr8.4:40064801-40064820 | MS.gene65017:intron | 25.0% |
! | CTAAAAGAGCAAATACAAAA+GGG | + | chr8.4:40065704-40065723 | MS.gene65017:CDS | 25.0% |
! | CTTCTTAAAATATAGTGTGA+TGG | - | chr8.4:40065424-40065443 | None:intergenic | 25.0% |
! | GAAACCATTTAGATAAAGAT+CGG | + | chr8.4:40064264-40064283 | MS.gene65017:CDS | 25.0% |
! | GTGGAAAAATTTGATCTATT+TGG | + | chr8.4:40064860-40064879 | MS.gene65017:CDS | 25.0% |
! | TAAAAGAGCAAATACAAAAG+GGG | + | chr8.4:40065705-40065724 | MS.gene65017:CDS | 25.0% |
! | TAAACAATCACTTTCAATCA+AGG | + | chr8.4:40064525-40064544 | MS.gene65017:intron | 25.0% |
! | TGATTGTTTACACCAATAAA+AGG | - | chr8.4:40064515-40064534 | None:intergenic | 25.0% |
!! | TCGCATGAAAAATGTATTTT+GGG | + | chr8.4:40064394-40064413 | MS.gene65017:CDS | 25.0% |
!!! | ATGAATGATACATTTTTTGG+TGG | + | chr8.4:40064938-40064957 | MS.gene65017:CDS | 25.0% |
!!! | CACACTATATTTTAAGAAGA+TGG | + | chr8.4:40065425-40065444 | MS.gene65017:CDS | 25.0% |
!!! | GAAATTTCAAGTTGAAGTTT+TGG | + | chr8.4:40065189-40065208 | MS.gene65017:CDS | 25.0% |
!!! | TCATATGGTTGATGAAAATA+TGG | + | chr8.4:40064591-40064610 | MS.gene65017:intron | 25.0% |
AAAATATGGCTTAGAGCAAT+GGG | + | chr8.4:40064605-40064624 | MS.gene65017:intron | 30.0% | |
AATACCTCAAATGTTCTCAA+TGG | + | chr8.4:40065915-40065934 | MS.gene65017:CDS | 30.0% | |
AATGAAAGAGGCTATTAAAG+AGG | + | chr8.4:40064670-40064689 | MS.gene65017:intron | 30.0% | |
AATGGAGAACATTCTATTGA+TGG | + | chr8.4:40063699-40063718 | MS.gene65017:CDS | 30.0% | |
ACAAGGATAATGAAAGAAGA+TGG | + | chr8.4:40065475-40065494 | MS.gene65017:CDS | 30.0% | |
ATAATGTGTCATACCATTCT+TGG | - | chr8.4:40065960-40065979 | None:intergenic | 30.0% | |
ATATGAAGAACGTGAACATT+GGG | + | chr8.4:40064904-40064923 | MS.gene65017:CDS | 30.0% | |
ATGGAGAACATTCTATTGAT+GGG | + | chr8.4:40063700-40063719 | MS.gene65017:CDS | 30.0% | |
ATTGACATTTGCTTCTCAAA+AGG | - | chr8.4:40065145-40065164 | None:intergenic | 30.0% | |
CAAGGATAATGAAAGAAGAT+GGG | + | chr8.4:40065476-40065495 | MS.gene65017:CDS | 30.0% | |
CCTAAAAGAGCAAATACAAA+AGG | + | chr8.4:40065703-40065722 | MS.gene65017:CDS | 30.0% | |
TATATGAAGAACGTGAACAT+TGG | + | chr8.4:40064903-40064922 | MS.gene65017:CDS | 30.0% | |
TATGGAGGATATGAAAACAT+TGG | + | chr8.4:40064221-40064240 | MS.gene65017:CDS | 30.0% | |
TCAATTGCATAAAAGAATCC+TGG | - | chr8.4:40064359-40064378 | None:intergenic | 30.0% | |
TCTTTGGCATATACTTAGAA+AGG | + | chr8.4:40064721-40064740 | MS.gene65017:intron | 30.0% | |
TCTTTGTAGACATTCATTGA+TGG | + | chr8.4:40065369-40065388 | MS.gene65017:CDS | 30.0% | |
TGATCAGTTATGATTGCATT+TGG | - | chr8.4:40064641-40064660 | None:intergenic | 30.0% | |
TGGTATGACACATTATTCTT+AGG | + | chr8.4:40065964-40065983 | MS.gene65017:intron | 30.0% | |
TTCATATCCTCCATATTCTT+TGG | - | chr8.4:40064216-40064235 | None:intergenic | 30.0% | |
TTGATCTATTTGGAGATGAT+TGG | + | chr8.4:40064870-40064889 | MS.gene65017:CDS | 30.0% | |
! | AAAGAATCTGTGATGGAAAA+TGG | + | chr8.4:40064033-40064052 | MS.gene65017:CDS | 30.0% |
! | AAGCAAAATTTTTGCCACAA+TGG | + | chr8.4:40064190-40064209 | MS.gene65017:CDS | 30.0% |
! | AGAAGCTTAGTCATGTTTTA+AGG | + | chr8.4:40064750-40064769 | MS.gene65017:intron | 30.0% |
! | ATATGAAAACATTGGTTGCT+TGG | + | chr8.4:40064229-40064248 | MS.gene65017:CDS | 30.0% |
! | CCTTTTGTATTTGCTCTTTT+AGG | - | chr8.4:40065706-40065725 | None:intergenic | 30.0% |
! | GTCGCATGAAAAATGTATTT+TGG | + | chr8.4:40064393-40064412 | MS.gene65017:CDS | 30.0% |
!! | CATGAAAAATGTATTTTGGG+TGG | + | chr8.4:40064397-40064416 | MS.gene65017:CDS | 30.0% |
!! | GAAGCTTAGTCATGTTTTAA+GGG | + | chr8.4:40064751-40064770 | MS.gene65017:intron | 30.0% |
!! | TATTTTAAGAAGATGGACCA+AGG | + | chr8.4:40065432-40065451 | MS.gene65017:CDS | 30.0% |
!!! | GTCGCTTTTTTGAGTATAAT+GGG | + | chr8.4:40065344-40065363 | MS.gene65017:CDS | 30.0% |
!!! | TGTCGCTTTTTTGAGTATAA+TGG | + | chr8.4:40065343-40065362 | MS.gene65017:CDS | 30.0% |
AAAACATGACTAAGCTTCTC+AGG | - | chr8.4:40064749-40064768 | None:intergenic | 35.0% | |
AAAATCGACAAGGAAAACGT+TGG | + | chr8.4:40065646-40065665 | MS.gene65017:CDS | 35.0% | |
AACAATGTGCAACTATCAAC+CGG | + | chr8.4:40065617-40065636 | MS.gene65017:CDS | 35.0% | |
AACGCCGATCTTTATCTAAA+TGG | - | chr8.4:40064271-40064290 | None:intergenic | 35.0% | |
ACACCAATAAAAGGAGCAAA+TGG | - | chr8.4:40064506-40064525 | None:intergenic | 35.0% | |
ACTCATTATGCTAAGTCAGT+TGG | + | chr8.4:40063852-40063871 | MS.gene65017:CDS | 35.0% | |
AGACCAAGAACACTTTCATA+TGG | + | chr8.4:40064576-40064595 | MS.gene65017:intron | 35.0% | |
AGAGAAGACTATCAAGAGTT+TGG | + | chr8.4:40064431-40064450 | MS.gene65017:intron | 35.0% | |
AGGTATTTACTGCTTCTCTT+TGG | - | chr8.4:40065902-40065921 | None:intergenic | 35.0% | |
AGTTATGCTTGCACAAGATA+CGG | + | chr8.4:40063936-40063955 | MS.gene65017:CDS | 35.0% | |
ATCCCACTCTTTATTCTTCT+TGG | - | chr8.4:40065733-40065752 | None:intergenic | 35.0% | |
ATGCTAAGTCAGTTGGATTT+GGG | + | chr8.4:40063859-40063878 | MS.gene65017:CDS | 35.0% | |
ATTGAAACTTTGCACCATGT+TGG | + | chr8.4:40064158-40064177 | MS.gene65017:CDS | 35.0% | |
ATTTGCTTCTCAAAAGGTGA+TGG | - | chr8.4:40065139-40065158 | None:intergenic | 35.0% | |
CAAAATCGATGTCGAGAATT+TGG | - | chr8.4:40064701-40064720 | None:intergenic | 35.0% | |
CACTTTCAATCAAGGTTACT+TGG | + | chr8.4:40064533-40064552 | MS.gene65017:intron | 35.0% | |
CGTGTTAAAAGAATCTGTGA+TGG | + | chr8.4:40064026-40064045 | MS.gene65017:CDS | 35.0% | |
CTCATGCAAGAAAAAAATCC+AGG | + | chr8.4:40064338-40064357 | MS.gene65017:CDS | 35.0% | |
CTCCAAGAAGAATAAAGAGT+GGG | + | chr8.4:40065728-40065747 | MS.gene65017:CDS | 35.0% | |
GAAAATATGGCTTAGAGCAA+TGG | + | chr8.4:40064604-40064623 | MS.gene65017:intron | 35.0% | |
GCAATTGATATGGATGATGA+GGG | + | chr8.4:40064371-40064390 | MS.gene65017:CDS | 35.0% | |
GCTATTGAATTTCTCGAAGA+AGG | + | chr8.4:40065538-40065557 | MS.gene65017:CDS | 35.0% | |
GGAAAATAATGTGCATATGC+TGG | - | chr8.4:40064101-40064120 | None:intergenic | 35.0% | |
TATGCTAAGTCAGTTGGATT+TGG | + | chr8.4:40063858-40063877 | MS.gene65017:CDS | 35.0% | |
TCAAACTCCATTCCAATGTT+AGG | - | chr8.4:40063804-40063823 | None:intergenic | 35.0% | |
TCAAAGTTTCTTCAAGTGCA+TGG | - | chr8.4:40065597-40065616 | None:intergenic | 35.0% | |
TCAAGAACCTAACATTGGAA+TGG | + | chr8.4:40063794-40063813 | MS.gene65017:CDS | 35.0% | |
TCAAGATAGAGCAATGAAAG+AGG | + | chr8.4:40064658-40064677 | MS.gene65017:intron | 35.0% | |
TCAGTTATGATTGCATTTGG+AGG | - | chr8.4:40064638-40064657 | None:intergenic | 35.0% | |
TGAAGATAAGTGGCATGAAA+TGG | + | chr8.4:40064838-40064857 | MS.gene65017:intron | 35.0% | |
TGCAATTGATATGGATGATG+AGG | + | chr8.4:40064370-40064389 | MS.gene65017:CDS | 35.0% | |
TTAGAAGCAAGCATCATACA+AGG | + | chr8.4:40065458-40065477 | MS.gene65017:CDS | 35.0% | |
TTCACCATTGAGAACATTTG+AGG | - | chr8.4:40065922-40065941 | None:intergenic | 35.0% | |
TTTAGATAAAGATCGGCGTT+TGG | + | chr8.4:40064271-40064290 | MS.gene65017:CDS | 35.0% | |
! | CATTATTTTCCTTGCCATAG+AGG | + | chr8.4:40064110-40064129 | MS.gene65017:CDS | 35.0% |
! | TTTTCACAGGAAAGTCATCA+GGG | + | chr8.4:40066051-40066070 | MS.gene65017:intron | 35.0% |
! | TTTTTCACAGGAAAGTCATC+AGG | + | chr8.4:40066050-40066069 | MS.gene65017:intron | 35.0% |
!! | ATGCCATTTGCTCCTTTTAT+TGG | + | chr8.4:40064500-40064519 | MS.gene65017:intron | 35.0% |
!! | CAACCATATGAAAGTGTTCT+TGG | - | chr8.4:40064582-40064601 | None:intergenic | 35.0% |
!! | GAGCTTTATTGATTCCTCTA+TGG | - | chr8.4:40064127-40064146 | None:intergenic | 35.0% |
!! | TTATTGATTCCTCTATGGCA+AGG | - | chr8.4:40064122-40064141 | None:intergenic | 35.0% |
!! | TTCATGTACCGTTGATTTAG+AGG | + | chr8.4:40063761-40063780 | MS.gene65017:CDS | 35.0% |
!!! | GTTGAAGTTTTGGGATTATC+TGG | + | chr8.4:40065199-40065218 | MS.gene65017:CDS | 35.0% |
ACAATGGCCAAAGAATATGG+AGG | + | chr8.4:40064206-40064225 | MS.gene65017:CDS | 40.0% | |
AGAAGATGGGTGTTCTAGTA+AGG | + | chr8.4:40065489-40065508 | MS.gene65017:CDS | 40.0% | |
AGATAAGTGGCATGAAATGG+TGG | + | chr8.4:40064841-40064860 | MS.gene65017:intron | 40.0% | |
AGGAGATGCAAATGCAATGT+TGG | + | chr8.4:40064304-40064323 | MS.gene65017:CDS | 40.0% | |
ATGCTTGCTTCTAACATCCT+TGG | - | chr8.4:40065452-40065471 | None:intergenic | 40.0% | |
CTGGAAAAAGTTCGTGATTG+TGG | - | chr8.4:40064082-40064101 | None:intergenic | 40.0% | |
GAATGAAGAGCAAGTTGTCA+AGG | + | chr8.4:40063722-40063741 | MS.gene65017:CDS | 40.0% | |
GCTCCAAGAAGAATAAAGAG+TGG | + | chr8.4:40065727-40065746 | MS.gene65017:CDS | 40.0% | |
TCCATATTCTTTGGCCATTG+TGG | - | chr8.4:40064207-40064226 | None:intergenic | 40.0% | |
TGCTTTACAGGATAGAGAAG+AGG | + | chr8.4:40065060-40065079 | MS.gene65017:CDS | 40.0% | |
TTTACAGGATAGAGAAGAGG+CGG | + | chr8.4:40065063-40065082 | MS.gene65017:CDS | 40.0% | |
! | AAATCCACGTCCTTGTTTGA+AGG | + | chr8.4:40063983-40064002 | MS.gene65017:CDS | 40.0% |
! | ACCGTTAGCCTCTAAATCAA+CGG | - | chr8.4:40063772-40063791 | None:intergenic | 40.0% |
! | ATGGAAGTTGTTGATGGGAA+TGG | + | chr8.4:40063681-40063700 | MS.gene65017:CDS | 40.0% |
! | TTGATGGCATTCCAAGCTAT+TGG | + | chr8.4:40065385-40065404 | MS.gene65017:CDS | 40.0% |
!! | ACCGTTGATTTAGAGGCTAA+CGG | + | chr8.4:40063768-40063787 | MS.gene65017:CDS | 40.0% |
!! | GTATTTTGGGTGGATGCAAA+AGG | + | chr8.4:40064407-40064426 | MS.gene65017:CDS | 40.0% |
!!! | CCTTGTCGATTTTCAAAGAC+CGG | - | chr8.4:40065639-40065658 | None:intergenic | 40.0% |
!!! | CTCGACATCGATTTTGTCTT+TGG | + | chr8.4:40064705-40064724 | MS.gene65017:intron | 40.0% |
!!! | GGCAAGCTGATTTTAAGACA+TGG | + | chr8.4:40065089-40065108 | MS.gene65017:CDS | 40.0% |
AACAGCTGCATTGCCAAGAA+TGG | + | chr8.4:40065944-40065963 | MS.gene65017:CDS | 45.0% | |
AGAGTGTGATGTCTCGAAGA+AGG | + | chr8.4:40065306-40065325 | MS.gene65017:CDS | 45.0% | |
ATAAAGAGTGGGATCGAGAG+AGG | + | chr8.4:40065739-40065758 | MS.gene65017:CDS | 45.0% | |
ATATGGCTTAGAGCAATGGG+TGG | + | chr8.4:40064608-40064627 | MS.gene65017:intron | 45.0% | |
CAACACAGACACCAATAGCT+TGG | - | chr8.4:40065399-40065418 | None:intergenic | 45.0% | |
GCCACAATGGCCAAAGAATA+TGG | + | chr8.4:40064203-40064222 | MS.gene65017:CDS | 45.0% | |
GGTGGTCAAGAACCTAACAT+TGG | + | chr8.4:40063789-40063808 | MS.gene65017:CDS | 45.0% | |
TCACATCCCACCTTCAAACA+AGG | - | chr8.4:40063996-40064015 | None:intergenic | 45.0% | |
TGCTTGTTCTCACTCCAACA+TGG | - | chr8.4:40064175-40064194 | None:intergenic | 45.0% | |
TTGTTTGAAGGTGGGATGTG+AGG | + | chr8.4:40063995-40064014 | MS.gene65017:CDS | 45.0% | |
! | AGGACGTGGATTTTGTGAAC+TGG | - | chr8.4:40063976-40063995 | None:intergenic | 45.0% |
! | CCGGTCTTTGAAAATCGACA+AGG | + | chr8.4:40065636-40065655 | MS.gene65017:CDS | 45.0% |
! | GTTGATTTAGAGGCTAACGG+TGG | + | chr8.4:40063771-40063790 | MS.gene65017:CDS | 45.0% |
AGGATAGAGAAGAGGCGGAA+AGG | + | chr8.4:40065068-40065087 | MS.gene65017:CDS | 50.0% | |
GGCACAAGCAACCTGTTCTT+AGG | + | chr8.4:40065110-40065129 | MS.gene65017:CDS | 50.0% | |
! | CCACGTCCTTGTTTGAAGGT+GGG | + | chr8.4:40063987-40064006 | MS.gene65017:CDS | 50.0% |
! | TCCACGTCCTTGTTTGAAGG+TGG | + | chr8.4:40063986-40064005 | MS.gene65017:CDS | 50.0% |
!! | CGGCGTTTGGCTTTAGAATC+AGG | + | chr8.4:40064284-40064303 | MS.gene65017:CDS | 50.0% |
!! | GGTGATGGAGTCCTAAGAAC+AGG | - | chr8.4:40065124-40065143 | None:intergenic | 50.0% |
CCCACCTTCAAACAAGGACG+TGG | - | chr8.4:40063990-40064009 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 40063681 | 40066077 | 40063681 | ID=MS.gene65017 |
chr8.4 | mRNA | 40063681 | 40066077 | 40063681 | ID=MS.gene65017.t1;Parent=MS.gene65017 |
chr8.4 | exon | 40063681 | 40064428 | 40063681 | ID=MS.gene65017.t1.exon1;Parent=MS.gene65017.t1 |
chr8.4 | CDS | 40063681 | 40064428 | 40063681 | ID=cds.MS.gene65017.t1;Parent=MS.gene65017.t1 |
chr8.4 | exon | 40064843 | 40065795 | 40064843 | ID=MS.gene65017.t1.exon2;Parent=MS.gene65017.t1 |
chr8.4 | CDS | 40064843 | 40065795 | 40064843 | ID=cds.MS.gene65017.t1;Parent=MS.gene65017.t1 |
chr8.4 | exon | 40065888 | 40065965 | 40065888 | ID=MS.gene65017.t1.exon3;Parent=MS.gene65017.t1 |
chr8.4 | CDS | 40065888 | 40065965 | 40065888 | ID=cds.MS.gene65017.t1;Parent=MS.gene65017.t1 |
chr8.4 | exon | 40066060 | 40066077 | 40066060 | ID=MS.gene65017.t1.exon4;Parent=MS.gene65017.t1 |
chr8.4 | CDS | 40066060 | 40066077 | 40066060 | ID=cds.MS.gene65017.t1;Parent=MS.gene65017.t1 |
Gene Sequence |
Protein sequence |