Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65145.t1 | KEH22833.1 | 86.9 | 778 | 66 | 5 | 1 | 750 | 1 | 770 | 0.00E+00 | 1139.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65145.t1 | Q01593 | 40.6 | 754 | 339 | 18 | 19 | 736 | 32 | 712 | 5.1e-78 | 293.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65145.t1 | A0A072U0Z8 | 86.9 | 778 | 66 | 5 | 1 | 750 | 1 | 770 | 0.0e+00 | 1139.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene65145.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65145.t1 | MTR_7g059330 | 91.131 | 778 | 33 | 5 | 1 | 750 | 1 | 770 | 0.0 | 1401 |
| MS.gene65145.t1 | MTR_7g083700 | 52.212 | 113 | 52 | 1 | 596 | 708 | 121 | 231 | 1.23e-30 | 123 |
| MS.gene65145.t1 | MTR_8g470990 | 86.047 | 43 | 6 | 0 | 181 | 223 | 40 | 82 | 2.17e-18 | 81.6 |
| MS.gene65145.t1 | MTR_4g088605 | 43.299 | 97 | 52 | 2 | 596 | 692 | 100 | 193 | 3.55e-18 | 85.9 |
| MS.gene65145.t1 | MTR_7g073240 | 37.500 | 104 | 61 | 2 | 601 | 704 | 121 | 220 | 1.53e-15 | 79.3 |
| MS.gene65145.t1 | MTR_4g028130 | 34.641 | 153 | 87 | 5 | 601 | 748 | 314 | 458 | 3.61e-15 | 80.1 |
| MS.gene65145.t1 | MTR_3g467380 | 36.538 | 104 | 62 | 3 | 601 | 704 | 338 | 437 | 1.29e-14 | 78.6 |
| MS.gene65145.t1 | MTR_2g011940 | 33.784 | 148 | 84 | 5 | 601 | 741 | 352 | 492 | 2.56e-14 | 77.0 |
| MS.gene65145.t1 | MTR_2g011940 | 33.784 | 148 | 84 | 5 | 601 | 741 | 352 | 492 | 2.85e-14 | 77.0 |
| MS.gene65145.t1 | MTR_2g011940 | 33.784 | 148 | 84 | 5 | 601 | 741 | 343 | 483 | 6.45e-14 | 76.3 |
| MS.gene65145.t1 | MTR_5g075410 | 31.293 | 147 | 86 | 4 | 601 | 747 | 321 | 452 | 8.54e-14 | 75.9 |
| MS.gene65145.t1 | MTR_4g028130 | 35.000 | 100 | 62 | 2 | 601 | 700 | 314 | 410 | 2.07e-13 | 74.7 |
| MS.gene65145.t1 | MTR_4g028130 | 37.079 | 89 | 53 | 2 | 601 | 689 | 314 | 399 | 3.18e-13 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65145.t1 | AT3G24650 | 44.805 | 770 | 284 | 28 | 19 | 736 | 32 | 712 | 3.24e-153 | 463 |
| MS.gene65145.t1 | AT3G26790 | 53.846 | 130 | 55 | 3 | 579 | 708 | 72 | 196 | 3.79e-36 | 139 |
| MS.gene65145.t1 | AT1G28300 | 56.701 | 97 | 40 | 1 | 596 | 692 | 165 | 259 | 1.68e-29 | 121 |
| MS.gene65145.t1 | AT2G30470 | 39.815 | 108 | 61 | 3 | 597 | 704 | 290 | 393 | 7.13e-16 | 82.4 |
| MS.gene65145.t1 | AT4G32010 | 37.000 | 100 | 60 | 2 | 601 | 700 | 281 | 377 | 2.61e-14 | 77.4 |
| MS.gene65145.t1 | AT4G32010 | 37.000 | 100 | 60 | 2 | 601 | 700 | 285 | 381 | 2.67e-14 | 77.4 |
| MS.gene65145.t1 | AT4G21550 | 37.500 | 104 | 59 | 4 | 601 | 704 | 327 | 424 | 1.50e-13 | 74.3 |
| MS.gene65145.t1 | AT4G21550 | 37.500 | 104 | 59 | 4 | 601 | 704 | 327 | 424 | 1.96e-13 | 74.3 |
| MS.gene65145.t1 | AT4G21550 | 37.500 | 104 | 59 | 4 | 601 | 704 | 327 | 424 | 2.16e-13 | 73.9 |
Find 157 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACTCATGGTATGAATTT+TGG | 0.145459 | 7.1:+42106913 | MS.gene65145:CDS |
| CCATCTCTTGCCTCCAATTC+TGG | 0.191237 | 7.1:-42107947 | None:intergenic |
| GAAATTTAGCAGAAGAAAAT+TGG | 0.230877 | 7.1:+42105552 | MS.gene65145:CDS |
| GAAACAGAACAAGTTGGTTT+TGG | 0.246821 | 7.1:+42105530 | MS.gene65145:CDS |
| CATGGATGATGTTAACATTA+TGG | 0.261818 | 7.1:+42106003 | MS.gene65145:CDS |
| TCACTATGAAATCTCCTTCT+TGG | 0.299532 | 7.1:-42108306 | None:intergenic |
| TTTGTCATCAACTGCTTCTA+TGG | 0.302150 | 7.1:+42105910 | MS.gene65145:CDS |
| CTTCTTGGAGCATCAGATAT+TGG | 0.312901 | 7.1:+42108133 | MS.gene65145:intron |
| AATTCTTATCAGTTGTTTCC+TGG | 0.316637 | 7.1:+42106955 | MS.gene65145:CDS |
| TTGAAACACGCATTCGATTC+AGG | 0.324156 | 7.1:-42106631 | None:intergenic |
| CAAATGTGTTTGCTGTGTTT+TGG | 0.327910 | 7.1:-42106606 | None:intergenic |
| AGTATTCAAGGAGATGAATT+AGG | 0.332563 | 7.1:+42106280 | MS.gene65145:CDS |
| AGAAACACATTTGCCAGAAT+TGG | 0.333835 | 7.1:+42107934 | MS.gene65145:CDS |
| GTTAACATTATGGATACTTT+TGG | 0.334842 | 7.1:+42106013 | MS.gene65145:CDS |
| TGTTTCCTGGTCCTGGTGAT+AGG | 0.335577 | 7.1:+42106968 | MS.gene65145:CDS |
| ACATTGGAACTTCTCGTGTT+TGG | 0.336580 | 7.1:+42107990 | MS.gene65145:CDS |
| TGTTGAAGCTTATTCTTGAA+TGG | 0.344675 | 7.1:+42106470 | MS.gene65145:CDS |
| TTCCTTGGCTCCTGTTGTTC+CGG | 0.345785 | 7.1:+42107230 | MS.gene65145:CDS |
| TATCAGTTGTTTCCTGGTCC+TGG | 0.347158 | 7.1:+42106961 | MS.gene65145:CDS |
| TTTGTGTGTGACGGTGTAAA+TGG | 0.349561 | 7.1:+42106250 | MS.gene65145:CDS |
| GATCAAGATGGTGATCTCTT+AGG | 0.364087 | 7.1:+42105593 | MS.gene65145:CDS |
| CGATGATAGTGCATGATGAT+AGG | 0.368561 | 7.1:+42106179 | MS.gene65145:CDS |
| GCAAAGTGATGTGGGAAGTC+TGG | 0.373169 | 7.1:+42107794 | MS.gene65145:CDS |
| TGAAGATGAAAACCCTTTAG+TGG | 0.375000 | 7.1:+42106093 | MS.gene65145:CDS |
| TTGTGTGTGACGGTGTAAAT+GGG | 0.391434 | 7.1:+42106251 | MS.gene65145:CDS |
| CTCATACAAATCCAGGTAAC+TGG | 0.393758 | 7.1:+42107172 | MS.gene65145:CDS |
| TCTGATCCACTTGCAAGATT+AGG | 0.399738 | 7.1:+42107111 | MS.gene65145:CDS |
| GTCGGCTCAGCCGGAACAAC+AGG | 0.404834 | 7.1:-42107240 | None:intergenic |
| GGTGACTTTGTGAAGGCTAA+TGG | 0.405230 | 7.1:+42108280 | MS.gene65145:intron |
| TGGTGGGACAGCAGCTTCCT+TGG | 0.405884 | 7.1:+42107215 | MS.gene65145:CDS |
| GAAACAGAACCATTTGTGTA+AGG | 0.406123 | 7.1:-42106748 | None:intergenic |
| GTGTTTGGAATATGCGATAT+AGG | 0.406922 | 7.1:+42108005 | MS.gene65145:CDS |
| ATTTGTGATACAGATGATAA+GGG | 0.410493 | 7.1:+42108905 | MS.gene65145:intron |
| TATCGGGTGCACTTCGGCCC+TGG | 0.412632 | 7.1:-42107314 | None:intergenic |
| AATTTGTGATACAGATGATA+AGG | 0.416712 | 7.1:+42108904 | MS.gene65145:intron |
| GTTGAAGCTTATTCTTGAAT+GGG | 0.419608 | 7.1:+42106471 | MS.gene65145:CDS |
| TCGAATAATGATGTTGTTGT+TGG | 0.421700 | 7.1:+42105968 | MS.gene65145:CDS |
| GCAAATGATTGATTGTAGTT+TGG | 0.423245 | 7.1:-42106865 | None:intergenic |
| CTTGAGGTTCCTTCTACAAA+AGG | 0.425157 | 7.1:+42107764 | MS.gene65145:CDS |
| AACCTTGAATATTCTGATGA+TGG | 0.426625 | 7.1:-42107089 | None:intergenic |
| TTTGATCTAGCCATGATGTT+TGG | 0.427680 | 7.1:-42106654 | None:intergenic |
| GATGACATGCATGGAAAATC+AGG | 0.429831 | 7.1:-42105668 | None:intergenic |
| CAAAGTGATGTGGGAAGTCT+GGG | 0.435116 | 7.1:+42107795 | MS.gene65145:CDS |
| TGTTGGTGGTGGTGATTGCA+TGG | 0.439533 | 7.1:+42105985 | MS.gene65145:CDS |
| AACCATCATCAGAATATTCA+AGG | 0.441107 | 7.1:+42107087 | MS.gene65145:CDS |
| AGATTAGGTGGTGGAAAAGA+AGG | 0.441852 | 7.1:+42106436 | MS.gene65145:CDS |
| GTGAGAATTCTGTGTCTGTA+TGG | 0.443912 | 7.1:-42107292 | None:intergenic |
| GCAGGCTGCGTCGGCTCAGC+CGG | 0.444495 | 7.1:-42107249 | None:intergenic |
| GTTGCTGATCCTTACACAAA+TGG | 0.448875 | 7.1:+42106739 | MS.gene65145:CDS |
| TGTTGAGGAACAAGATTTGA+AGG | 0.450486 | 7.1:-42106556 | None:intergenic |
| CTTGTGTGAAATCCACTAAA+GGG | 0.453109 | 7.1:-42106105 | None:intergenic |
| CCAATGGTTGGAGTTGGAGT+TGG | 0.454100 | 7.1:+42106712 | MS.gene65145:CDS |
| CTAGTCATCTTCAAAACAAA+AGG | 0.455119 | 7.1:+42106500 | MS.gene65145:CDS |
| GCAGTTGATGACAAAGTTGT+TGG | 0.458355 | 7.1:-42105902 | None:intergenic |
| TTAGATCTTGTTATGGAGTG+TGG | 0.458680 | 7.1:+42105479 | None:intergenic |
| ATCCAGGTAACTGGATGTAT+TGG | 0.458694 | 7.1:+42107181 | MS.gene65145:CDS |
| GGAACTGCAGTGGATAATAA+TGG | 0.460105 | 7.1:+42109023 | MS.gene65145:CDS |
| CAACAACAGCAACAAGATCT+TGG | 0.467069 | 7.1:+42105941 | MS.gene65145:CDS |
| TTAGTAGCAGCAGGTTGGTA+AGG | 0.468267 | 7.1:-42106784 | None:intergenic |
| GAAAGTGCTGCTAAGAGATT+AGG | 0.469707 | 7.1:+42106421 | MS.gene65145:CDS |
| AATGGGGAAGAGAGTATTCA+AGG | 0.474011 | 7.1:+42106268 | MS.gene65145:CDS |
| AATGATGTTGTTGTTGGTGG+TGG | 0.475401 | 7.1:+42105974 | MS.gene65145:CDS |
| TGTAAGTGATGAAATGAGTA+TGG | 0.477564 | 7.1:+42106315 | MS.gene65145:CDS |
| AATAATGATGTTGTTGTTGG+TGG | 0.478444 | 7.1:+42105971 | MS.gene65145:CDS |
| GGTGATAGGTTGATGAGGTT+AGG | 0.481801 | 7.1:+42106982 | MS.gene65145:CDS |
| TTTAGATCTGCATGCAAAGT+TGG | 0.483324 | 7.1:+42105502 | MS.gene65145:CDS |
| TTGATGCATTATTCCCATGC+TGG | 0.484054 | 7.1:-42108992 | None:intergenic |
| AACACATTTGCCAGAATTGG+AGG | 0.485525 | 7.1:+42107937 | MS.gene65145:CDS |
| GGCGGTTTATGTCTCATCAT+AGG | 0.485732 | 7.1:+42107052 | MS.gene65145:CDS |
| TCCTCGATATTCACTTGTTG+CGG | 0.497932 | 7.1:-42106211 | None:intergenic |
| TCCACAAACCTGTCTCCTAT+CGG | 0.498147 | 7.1:-42107331 | None:intergenic |
| CCACAAACCTGTCTCCTATC+GGG | 0.499467 | 7.1:-42107330 | None:intergenic |
| GAATTCTGTGTCTGTATGGT+GGG | 0.500175 | 7.1:-42107288 | None:intergenic |
| TCAATTACAATGGAAGACAT+TGG | 0.500827 | 7.1:+42107974 | MS.gene65145:CDS |
| TCTTGTGTGAAATCCACTAA+AGG | 0.501764 | 7.1:-42106106 | None:intergenic |
| TCACAACCAATGGTTGGAGT+TGG | 0.514632 | 7.1:+42106706 | MS.gene65145:CDS |
| GGTGGTTCTCATACAAATCC+AGG | 0.515510 | 7.1:+42107165 | MS.gene65145:CDS |
| AATAATGCATCAAATTCAGT+TGG | 0.520321 | 7.1:+42109002 | MS.gene65145:CDS |
| CCAGAATTGGAGGCAAGAGA+TGG | 0.521085 | 7.1:+42107947 | MS.gene65145:CDS |
| TGCCAATACATCCAGTTACC+TGG | 0.522443 | 7.1:-42107183 | None:intergenic |
| TGATAGTCATTAGTAGCAGC+AGG | 0.526692 | 7.1:-42106793 | None:intergenic |
| CATGTATTAGATTATCATCA+TGG | 0.526970 | 7.1:+42105872 | MS.gene65145:CDS |
| GTGTCTCGGCAAATGATTTG+AGG | 0.530612 | 7.1:+42106371 | MS.gene65145:CDS |
| GATTAGGTGGTGGAAAAGAA+GGG | 0.531409 | 7.1:+42106437 | MS.gene65145:CDS |
| TGCACCAATGTTGCTGCTGG+TGG | 0.534906 | 7.1:+42107147 | MS.gene65145:CDS |
| AGAAGAGGATGGCTCGGCAA+CGG | 0.537506 | 7.1:+42107031 | MS.gene65145:CDS |
| GATGATAGTGCATGATGATA+GGG | 0.538792 | 7.1:+42106180 | MS.gene65145:CDS |
| AAGTGCACCCGATAGGAGAC+AGG | 0.539885 | 7.1:+42107323 | MS.gene65145:CDS |
| AGAATTCTGTGTCTGTATGG+TGG | 0.540584 | 7.1:-42107289 | None:intergenic |
| AGCCGGAACAACAGGAGCCA+AGG | 0.545036 | 7.1:-42107232 | None:intergenic |
| AGATGGAATTTCAATTACAA+TGG | 0.546108 | 7.1:+42107964 | MS.gene65145:CDS |
| AAACTACAATCAATCATTTG+CGG | 0.546590 | 7.1:+42106867 | MS.gene65145:CDS |
| GGGCGATCACGATCTACTGC+AGG | 0.549136 | 7.1:-42107267 | None:intergenic |
| GATGTTGAAGTAGATAATCA+AGG | 0.555651 | 7.1:+42105821 | MS.gene65145:intron |
| TAGTAGCAGCAGGTTGGTAA+GGG | 0.556194 | 7.1:-42106783 | None:intergenic |
| ATTGGTTGTGAAAATTGTTG+TGG | 0.556322 | 7.1:-42106694 | None:intergenic |
| AGGTAATATTGTGTTAATGT+TGG | 0.556564 | 7.1:-42106536 | None:intergenic |
| ATTGGCCAAACAACAAAAGC+AGG | 0.559048 | 7.1:+42108151 | MS.gene65145:CDS |
| AGAACCACCAGCAGCAACAT+TGG | 0.559637 | 7.1:-42107151 | None:intergenic |
| ATGCATGGAAAATCAGGTAA+AGG | 0.563307 | 7.1:-42105662 | None:intergenic |
| GATCCACTTGCAAGATTAGG+TGG | 0.564399 | 7.1:+42107114 | MS.gene65145:CDS |
| ACAGACACAGAATTCTCACC+AGG | 0.564460 | 7.1:+42107296 | MS.gene65145:CDS |
| TGTTGGAATCAAATCATTCG+TGG | 0.564755 | 7.1:+42106818 | MS.gene65145:CDS |
| CAAAAGAAGCTAGAAAGAAG+AGG | 0.568012 | 7.1:+42107016 | MS.gene65145:CDS |
| ATCTAACAAAGATAGTGTCT+CGG | 0.568134 | 7.1:+42106357 | MS.gene65145:CDS |
| GCAACAAGTTCAAGTGCAAG+AGG | 0.568536 | 7.1:+42106129 | MS.gene65145:CDS |
| CTATCATCATGCACTATCAT+CGG | 0.568658 | 7.1:-42106178 | None:intergenic |
| CGATCTACTGCAGGCTGCGT+CGG | 0.569097 | 7.1:-42107258 | None:intergenic |
| TCTTGAAACTGTTGTTGTTG+AGG | 0.572652 | 7.1:-42106571 | None:intergenic |
| CATGGAAAATCAGGTAAAGG+TGG | 0.574020 | 7.1:-42105659 | None:intergenic |
| ATGTATTGGCAGACTATGAC+TGG | 0.575203 | 7.1:+42107195 | MS.gene65145:CDS |
| CAACAAGTTCAAGTGCAAGA+GGG | 0.577061 | 7.1:+42106130 | MS.gene65145:CDS |
| CCACCACCTAATCTTGCAAG+TGG | 0.579510 | 7.1:-42107117 | None:intergenic |
| CTAGAAAGAAGAGGATGGCT+CGG | 0.580461 | 7.1:+42107025 | MS.gene65145:CDS |
| AATACTACAAATGATCAAGA+TGG | 0.586104 | 7.1:+42105581 | MS.gene65145:CDS |
| GTTGGAATCAAATCATTCGT+GGG | 0.586757 | 7.1:+42106819 | MS.gene65145:CDS |
| GTAAATGAAACAGAACAAGT+TGG | 0.588116 | 7.1:+42105524 | MS.gene65145:CDS |
| CGTGTTTCAACCAAACATCA+TGG | 0.589088 | 7.1:+42106644 | MS.gene65145:CDS |
| AATTGCACCAATGTTGCTGC+TGG | 0.589434 | 7.1:+42107144 | MS.gene65145:CDS |
| GTCTCCTATCGGGTGCACTT+CGG | 0.589557 | 7.1:-42107320 | None:intergenic |
| AGGGCCGAAGTGCACCCGAT+AGG | 0.592099 | 7.1:+42107316 | MS.gene65145:CDS |
| CCAACTCCAACTCCAACCAT+TGG | 0.593836 | 7.1:-42106712 | None:intergenic |
| TACTAATGACTATCACATGT+TGG | 0.596503 | 7.1:+42106801 | MS.gene65145:CDS |
| AAGGCTAATGGACTCCAAGA+AGG | 0.600158 | 7.1:+42108292 | MS.gene65145:CDS |
| AACCTCATCAACCTATCACC+AGG | 0.601661 | 7.1:-42106979 | None:intergenic |
| AGCAATGTGCTACAAACTCA+TGG | 0.604569 | 7.1:+42106901 | MS.gene65145:CDS |
| AAATTCAGTTGGAACTGCAG+TGG | 0.605678 | 7.1:+42109013 | MS.gene65145:CDS |
| GGAAGCCTGAAAAGAACTTG+AGG | 0.606267 | 7.1:+42107748 | MS.gene65145:CDS |
| GTTGATGACAAAGTTGTTGG+AGG | 0.610564 | 7.1:-42105899 | None:intergenic |
| AGAAGCTAGAAAGAAGAGGA+TGG | 0.610747 | 7.1:+42107020 | MS.gene65145:CDS |
| AACAAGTTCAAGTGCAAGAG+GGG | 0.612587 | 7.1:+42106131 | MS.gene65145:CDS |
| AGAGGATGGCTCGGCAACGG+CGG | 0.616260 | 7.1:+42107034 | MS.gene65145:CDS |
| GGTTGTGAAAATTGTTGTGG+AGG | 0.618026 | 7.1:-42106691 | None:intergenic |
| TGTAGTTGAAGTACATGCAA+TGG | 0.622529 | 7.1:-42105729 | None:intergenic |
| GGAGTTAAAGTGAGGCAACA+AGG | 0.623818 | 7.1:+42108927 | MS.gene65145:CDS |
| TGTGTGTGACGGTGTAAATG+GGG | 0.629065 | 7.1:+42106252 | MS.gene65145:CDS |
| AGTCATTAGTAGCAGCAGGT+TGG | 0.632190 | 7.1:-42106789 | None:intergenic |
| ATCAACCTATCACCAGGACC+AGG | 0.632824 | 7.1:-42106973 | None:intergenic |
| GAAGATGATGATGACATGCA+TGG | 0.637958 | 7.1:-42105677 | None:intergenic |
| TTTGTGATACAGATGATAAG+GGG | 0.638390 | 7.1:+42108906 | MS.gene65145:intron |
| AGTGCTGCTAAGAGATTAGG+TGG | 0.639649 | 7.1:+42106424 | MS.gene65145:CDS |
| TGTTGTGGAGGTACAATGAG+AGG | 0.642005 | 7.1:-42106679 | None:intergenic |
| GTCCTGGTGATAGGTTGATG+AGG | 0.656286 | 7.1:+42106977 | MS.gene65145:CDS |
| GCTGCTAAGAGATTAGGTGG+TGG | 0.661001 | 7.1:+42106427 | MS.gene65145:CDS |
| TGATAAGGGGAGTTAAAGTG+AGG | 0.663130 | 7.1:+42108919 | MS.gene65145:CDS |
| ATGTACTTGCTAGAGAACAC+TGG | 0.672784 | 7.1:+42108174 | MS.gene65145:CDS |
| AATTCTGTGTCTGTATGGTG+GGG | 0.675933 | 7.1:-42107287 | None:intergenic |
| TTGGAATCAAATCATTCGTG+GGG | 0.679978 | 7.1:+42106820 | MS.gene65145:CDS |
| GCAACAAGGAACAAAACCAG+AGG | 0.684606 | 7.1:+42108941 | MS.gene65145:CDS |
| GATGAATTAGGTGCATGTGA+TGG | 0.687203 | 7.1:+42106292 | MS.gene65145:CDS |
| ATTGGCAGACTATGACTGGT+GGG | 0.691493 | 7.1:+42107199 | MS.gene65145:CDS |
| CCACTTGCAAGATTAGGTGG+TGG | 0.698327 | 7.1:+42107117 | MS.gene65145:CDS |
| TATTGGCAGACTATGACTGG+TGG | 0.706224 | 7.1:+42107198 | MS.gene65145:CDS |
| ACCGCAACAAGTGAATATCG+AGG | 0.707077 | 7.1:+42106210 | MS.gene65145:CDS |
| ATATATTCTGATGTGAAGTG+TGG | 0.723007 | 7.1:+42108328 | MS.gene65145:CDS |
| AAAGTGATGTGGGAAGTCTG+GGG | 0.734540 | 7.1:+42107796 | MS.gene65145:CDS |
| CAGACACAGAATTCTCACCA+GGG | 0.761167 | 7.1:+42107297 | MS.gene65145:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTATAAGTTTTAAATTA+TGG | + | chr7.1:42107469-42107488 | MS.gene65145:intron | 10.0% |
| !!! | TTTTTCTTACTTAATTTTTA+TGG | + | chr7.1:42108382-42108401 | MS.gene65145:intron | 10.0% |
| !! | CATATGTTAAATATGAAAAT+CGG | - | chr7.1:42108559-42108578 | None:intergenic | 15.0% |
| !! | TTTATTTAATAATTGCTATC+TGG | + | chr7.1:42108597-42108616 | MS.gene65145:intron | 15.0% |
| !!! | AGAAAATCAATAATTACTTT+TGG | - | chr7.1:42107834-42107853 | None:intergenic | 15.0% |
| !!! | TATATTTCTTTTCATTTTGT+AGG | + | chr7.1:42108259-42108278 | MS.gene65145:intron | 15.0% |
| !! | GAAAAAAACATTATAAGAGA+AGG | - | chr7.1:42108368-42108387 | None:intergenic | 20.0% |
| !! | GACAATTATAATTGATTGAT+CGG | - | chr7.1:42107648-42107667 | None:intergenic | 20.0% |
| !!! | AAAAGTTGAGAATTAATTTG+TGG | + | chr7.1:42108875-42108894 | MS.gene65145:intron | 20.0% |
| !!! | AAAGTTGAGAATTAATTTGT+GGG | + | chr7.1:42108876-42108895 | MS.gene65145:intron | 20.0% |
| ! | AAACTACAATCAATCATTTG+CGG | + | chr7.1:42106867-42106886 | MS.gene65145:CDS | 25.0% |
| ! | AATAATGCATCAAATTCAGT+TGG | + | chr7.1:42109002-42109021 | MS.gene65145:CDS | 25.0% |
| ! | AATACTACAAATGATCAAGA+TGG | + | chr7.1:42105581-42105600 | MS.gene65145:CDS | 25.0% |
| ! | AATTTGTGATACAGATGATA+AGG | + | chr7.1:42108904-42108923 | MS.gene65145:intron | 25.0% |
| ! | AGATGGAATTTCAATTACAA+TGG | + | chr7.1:42107964-42107983 | MS.gene65145:CDS | 25.0% |
| ! | AGGTAATATTGTGTTAATGT+TGG | - | chr7.1:42106539-42106558 | None:intergenic | 25.0% |
| ! | AGTAACATGCTTCAAAAAAA+TGG | + | chr7.1:42105848-42105867 | MS.gene65145:CDS | 25.0% |
| ! | ATAATTGATTGATCGGATAA+TGG | - | chr7.1:42107641-42107660 | None:intergenic | 25.0% |
| ! | ATTTGTGATACAGATGATAA+GGG | + | chr7.1:42108905-42108924 | MS.gene65145:intron | 25.0% |
| ! | CATGTATTAGATTATCATCA+TGG | + | chr7.1:42105872-42105891 | MS.gene65145:CDS | 25.0% |
| ! | GAAATTTAGCAGAAGAAAAT+TGG | + | chr7.1:42105552-42105571 | MS.gene65145:CDS | 25.0% |
| !! | GTTAACATTATGGATACTTT+TGG | + | chr7.1:42106013-42106032 | MS.gene65145:CDS | 25.0% |
| !! | TGATTTTTAATACTTTTCCG+TGG | - | chr7.1:42108472-42108491 | None:intergenic | 25.0% |
| !!! | TCTTTTCGATTATTTCTTCT+TGG | + | chr7.1:42108118-42108137 | MS.gene65145:intron | 25.0% |
| AAAAATCATACCAAACCAAC+CGG | + | chr7.1:42108484-42108503 | MS.gene65145:intron | 30.0% | |
| AAATCATTACTTTGTTGCCA+CGG | + | chr7.1:42108452-42108471 | MS.gene65145:intron | 30.0% | |
| AACCATCATCAGAATATTCA+AGG | + | chr7.1:42107087-42107106 | MS.gene65145:CDS | 30.0% | |
| AACCTTGAATATTCTGATGA+TGG | - | chr7.1:42107092-42107111 | None:intergenic | 30.0% | |
| AGTATTCAAGGAGATGAATT+AGG | + | chr7.1:42106280-42106299 | MS.gene65145:CDS | 30.0% | |
| ATATATTCTGATGTGAAGTG+TGG | + | chr7.1:42108328-42108347 | MS.gene65145:CDS | 30.0% | |
| ATCTAACAAAGATAGTGTCT+CGG | + | chr7.1:42106357-42106376 | MS.gene65145:CDS | 30.0% | |
| ATTGCAAAAACATCAGAAAG+AGG | + | chr7.1:42107910-42107929 | MS.gene65145:intron | 30.0% | |
| ATTGGTTGTGAAAATTGTTG+TGG | - | chr7.1:42106697-42106716 | None:intergenic | 30.0% | |
| CACAATTCAATTAGTTGAAC+CGG | - | chr7.1:42108506-42108525 | None:intergenic | 30.0% | |
| CATATTTATCCATTTGTCTG+CGG | + | chr7.1:42107567-42107586 | MS.gene65145:intron | 30.0% | |
| CATGGATGATGTTAACATTA+TGG | + | chr7.1:42106003-42106022 | MS.gene65145:CDS | 30.0% | |
| CTAATTGAATTGTGAATCCT+CGG | + | chr7.1:42108512-42108531 | MS.gene65145:intron | 30.0% | |
| CTAGTCATCTTCAAAACAAA+AGG | + | chr7.1:42106500-42106519 | MS.gene65145:CDS | 30.0% | |
| GAGTCATTCTTCTTATTCAT+TGG | + | chr7.1:42108198-42108217 | MS.gene65145:intron | 30.0% | |
| GATAAATATGACCACAATTG+TGG | - | chr7.1:42107557-42107576 | None:intergenic | 30.0% | |
| GATGTTGAAGTAGATAATCA+AGG | + | chr7.1:42105821-42105840 | MS.gene65145:intron | 30.0% | |
| GCAAATGATTGATTGTAGTT+TGG | - | chr7.1:42106868-42106887 | None:intergenic | 30.0% | |
| GTAAATGAAACAGAACAAGT+TGG | + | chr7.1:42105524-42105543 | MS.gene65145:CDS | 30.0% | |
| GTTGAAGCTTATTCTTGAAT+GGG | + | chr7.1:42106471-42106490 | MS.gene65145:CDS | 30.0% | |
| GTTGATGCATTTGATTGATA+GGG | + | chr7.1:42107723-42107742 | MS.gene65145:intron | 30.0% | |
| TACTAATGACTATCACATGT+TGG | + | chr7.1:42106801-42106820 | MS.gene65145:CDS | 30.0% | |
| TCAATTACAATGGAAGACAT+TGG | + | chr7.1:42107974-42107993 | MS.gene65145:CDS | 30.0% | |
| TCGAATAATGATGTTGTTGT+TGG | + | chr7.1:42105968-42105987 | MS.gene65145:CDS | 30.0% | |
| TGTAAGTGATGAAATGAGTA+TGG | + | chr7.1:42106315-42106334 | MS.gene65145:CDS | 30.0% | |
| TGTTGAAGCTTATTCTTGAA+TGG | + | chr7.1:42106470-42106489 | MS.gene65145:CDS | 30.0% | |
| TGTTGATGCATTTGATTGAT+AGG | + | chr7.1:42107722-42107741 | MS.gene65145:intron | 30.0% | |
| TTTGTGATACAGATGATAAG+GGG | + | chr7.1:42108906-42108925 | MS.gene65145:intron | 30.0% | |
| ! | AATAATGATGTTGTTGTTGG+TGG | + | chr7.1:42105971-42105990 | MS.gene65145:CDS | 30.0% |
| ! | AATTCTTATCAGTTGTTTCC+TGG | + | chr7.1:42106955-42106974 | MS.gene65145:CDS | 30.0% |
| ! | ACAACAATTTTCACAACCAA+TGG | + | chr7.1:42106696-42106715 | MS.gene65145:CDS | 30.0% |
| ! | CAAACTCATGGTATGAATTT+TGG | + | chr7.1:42106913-42106932 | MS.gene65145:CDS | 30.0% |
| ! | TGAAATGAGTATGGTTTTCT+TGG | + | chr7.1:42106324-42106343 | MS.gene65145:CDS | 30.0% |
| !! | CATTTTGAAAAATCGAAGCA+GGG | - | chr7.1:42106075-42106094 | None:intergenic | 30.0% |
| !! | TATGGATACTTTTGGTTACA+TGG | + | chr7.1:42106021-42106040 | MS.gene65145:CDS | 30.0% |
| !! | TCATTTTGAAAAATCGAAGC+AGG | - | chr7.1:42106076-42106095 | None:intergenic | 30.0% |
| AAACCAGAGGCAAAAAAATC+AGG | + | chr7.1:42108954-42108973 | MS.gene65145:CDS | 35.0% | |
| AAATCACAGAAAAACCAGCA+TGG | + | chr7.1:42108978-42108997 | MS.gene65145:CDS | 35.0% | |
| AACCAATTAACCATTGCTTG+AGG | + | chr7.1:42108643-42108662 | MS.gene65145:intron | 35.0% | |
| AATCACAGAAAAACCAGCAT+GGG | + | chr7.1:42108979-42108998 | MS.gene65145:CDS | 35.0% | |
| AATCCAAGGGTCAATTTAGA+CGG | - | chr7.1:42108705-42108724 | None:intergenic | 35.0% | |
| AATTTCCTGAGAGATAAGCT+TGG | + | chr7.1:42108410-42108429 | MS.gene65145:intron | 35.0% | |
| AGAAACACATTTGCCAGAAT+TGG | + | chr7.1:42107934-42107953 | MS.gene65145:CDS | 35.0% | |
| ATCATGTTCATCATTCTCGA+GGG | + | chr7.1:42108735-42108754 | MS.gene65145:intron | 35.0% | |
| ATGCATGGAAAATCAGGTAA+AGG | - | chr7.1:42105665-42105684 | None:intergenic | 35.0% | |
| ATGCATTTGATTGATAGGGT+TGG | + | chr7.1:42107727-42107746 | MS.gene65145:intron | 35.0% | |
| ATTCAATTAGTTGAACCGGT+TGG | - | chr7.1:42108502-42108521 | None:intergenic | 35.0% | |
| CAAAAGAAGCTAGAAAGAAG+AGG | + | chr7.1:42107016-42107035 | MS.gene65145:CDS | 35.0% | |
| CAATTGTGGCTGCAATATAA+TGG | + | chr7.1:42107502-42107521 | MS.gene65145:intron | 35.0% | |
| CTATCATCATGCACTATCAT+CGG | - | chr7.1:42106181-42106200 | None:intergenic | 35.0% | |
| CTTGTGTGAAATCCACTAAA+GGG | - | chr7.1:42106108-42106127 | None:intergenic | 35.0% | |
| GAAACAGAACCATTTGTGTA+AGG | - | chr7.1:42106751-42106770 | None:intergenic | 35.0% | |
| GTTGGAATCAAATCATTCGT+GGG | + | chr7.1:42106819-42106838 | MS.gene65145:CDS | 35.0% | |
| TCACTATGAAATCTCCTTCT+TGG | - | chr7.1:42108309-42108328 | None:intergenic | 35.0% | |
| TCTTGTGTGAAATCCACTAA+AGG | - | chr7.1:42106109-42106128 | None:intergenic | 35.0% | |
| TGAAGATGAAAACCCTTTAG+TGG | + | chr7.1:42106093-42106112 | MS.gene65145:CDS | 35.0% | |
| TGTAGTTGAAGTACATGCAA+TGG | - | chr7.1:42105732-42105751 | None:intergenic | 35.0% | |
| TGTTGAGGAACAAGATTTGA+AGG | - | chr7.1:42106559-42106578 | None:intergenic | 35.0% | |
| TGTTGGAATCAAATCATTCG+TGG | + | chr7.1:42106818-42106837 | MS.gene65145:CDS | 35.0% | |
| TTGAGCAAATGCATCATCAT+TGG | + | chr7.1:42108801-42108820 | MS.gene65145:intron | 35.0% | |
| TTGGAATCAAATCATTCGTG+GGG | + | chr7.1:42106820-42106839 | MS.gene65145:CDS | 35.0% | |
| TTTAGATCTGCATGCAAAGT+TGG | + | chr7.1:42105502-42105521 | MS.gene65145:CDS | 35.0% | |
| TTTGATCTAGCCATGATGTT+TGG | - | chr7.1:42106657-42106676 | None:intergenic | 35.0% | |
| TTTGTCATCAACTGCTTCTA+TGG | + | chr7.1:42105910-42105929 | MS.gene65145:CDS | 35.0% | |
| ! | ACTCATGGTATGAATTTTGG+AGG | + | chr7.1:42106916-42106935 | MS.gene65145:CDS | 35.0% |
| ! | CAATTTTCACAACCAATGGT+TGG | + | chr7.1:42106700-42106719 | MS.gene65145:CDS | 35.0% |
| ! | GATGATAGTGCATGATGATA+GGG | + | chr7.1:42106180-42106199 | MS.gene65145:CDS | 35.0% |
| ! | GCTTCAAAACCTTTTGTAGA+AGG | - | chr7.1:42107776-42107795 | None:intergenic | 35.0% |
| ! | GTACATGCAATGGTTTTCAA+TGG | - | chr7.1:42105722-42105741 | None:intergenic | 35.0% |
| ! | GTGTTTGGAATATGCGATAT+AGG | + | chr7.1:42108005-42108024 | MS.gene65145:CDS | 35.0% |
| ! | TCTTGAAACTGTTGTTGTTG+AGG | - | chr7.1:42106574-42106593 | None:intergenic | 35.0% |
| ! | TTTTGTAGGTGACTTTGTGA+AGG | + | chr7.1:42108273-42108292 | MS.gene65145:intron | 35.0% |
| !! | GGTATGAATTTTGGAGGTTA+TGG | + | chr7.1:42106922-42106941 | MS.gene65145:CDS | 35.0% |
| !!! | CAAATGTGTTTGCTGTGTTT+TGG | - | chr7.1:42106609-42106628 | None:intergenic | 35.0% |
| !!! | GAAACAGAACAAGTTGGTTT+TGG | + | chr7.1:42105530-42105549 | MS.gene65145:CDS | 35.0% |
| !!! | GTTTTGAAGCAAAGTGATGT+GGG | + | chr7.1:42107786-42107805 | MS.gene65145:CDS | 35.0% |
| !!! | TACATCCTGCTTTTGTTGTT+TGG | - | chr7.1:42108159-42108178 | None:intergenic | 35.0% |
| !!! | TTTCCTGATTTTTTTGCCTC+TGG | - | chr7.1:42108960-42108979 | None:intergenic | 35.0% |
| !!! | TTTTTTCGCTTTGGTGAAGA+TGG | - | chr7.1:42109053-42109072 | None:intergenic | 35.0% |
| AAAATCGGTTGAACCAACCA+TGG | - | chr7.1:42108544-42108563 | None:intergenic | 40.0% | |
| AAATTCAGTTGGAACTGCAG+TGG | + | chr7.1:42109013-42109032 | MS.gene65145:CDS | 40.0% | |
| AACAAGTTCAAGTGCAAGAG+GGG | + | chr7.1:42106131-42106150 | MS.gene65145:CDS | 40.0% | |
| AACACATTTGCCAGAATTGG+AGG | + | chr7.1:42107937-42107956 | MS.gene65145:CDS | 40.0% | |
| AAGTTCCAAGCTTATCTCTC+AGG | - | chr7.1:42108418-42108437 | None:intergenic | 40.0% | |
| AATTCTGTGTCTGTATGGTG+GGG | - | chr7.1:42107290-42107309 | None:intergenic | 40.0% | |
| ACATTGGAACTTCTCGTGTT+TGG | + | chr7.1:42107990-42108009 | MS.gene65145:CDS | 40.0% | |
| AGAAGCTAGAAAGAAGAGGA+TGG | + | chr7.1:42107020-42107039 | MS.gene65145:CDS | 40.0% | |
| AGAATTCTGTGTCTGTATGG+TGG | - | chr7.1:42107292-42107311 | None:intergenic | 40.0% | |
| AGCAATGTGCTACAAACTCA+TGG | + | chr7.1:42106901-42106920 | MS.gene65145:CDS | 40.0% | |
| ATCCAGGTAACTGGATGTAT+TGG | + | chr7.1:42107181-42107200 | MS.gene65145:CDS | 40.0% | |
| ATGGTCAACAACTGCAATTG+TGG | + | chr7.1:42107488-42107507 | MS.gene65145:intron | 40.0% | |
| ATTGGCCAAACAACAAAAGC+AGG | + | chr7.1:42108151-42108170 | MS.gene65145:CDS | 40.0% | |
| CAACAACAGCAACAAGATCT+TGG | + | chr7.1:42105941-42105960 | MS.gene65145:CDS | 40.0% | |
| CAACAAGTTCAAGTGCAAGA+GGG | + | chr7.1:42106130-42106149 | MS.gene65145:CDS | 40.0% | |
| CATCATGTTCATCATTCTCG+AGG | + | chr7.1:42108734-42108753 | MS.gene65145:intron | 40.0% | |
| CATGGAAAATCAGGTAAAGG+TGG | - | chr7.1:42105662-42105681 | None:intergenic | 40.0% | |
| CGTGTTTCAACCAAACATCA+TGG | + | chr7.1:42106644-42106663 | MS.gene65145:CDS | 40.0% | |
| CTCATACAAATCCAGGTAAC+TGG | + | chr7.1:42107172-42107191 | MS.gene65145:CDS | 40.0% | |
| CTGCGGATATCGTAGTATAA+TGG | + | chr7.1:42107584-42107603 | MS.gene65145:intron | 40.0% | |
| CTTGAGGTTCCTTCTACAAA+AGG | + | chr7.1:42107764-42107783 | MS.gene65145:CDS | 40.0% | |
| GAATTCTGTGTCTGTATGGT+GGG | - | chr7.1:42107291-42107310 | None:intergenic | 40.0% | |
| GACCTCAAGCAATGGTTAAT+TGG | - | chr7.1:42108648-42108667 | None:intergenic | 40.0% | |
| GATCAAGATGGTGATCTCTT+AGG | + | chr7.1:42105593-42105612 | MS.gene65145:CDS | 40.0% | |
| GATGAATTAGGTGCATGTGA+TGG | + | chr7.1:42106292-42106311 | MS.gene65145:CDS | 40.0% | |
| GATGACATGCATGGAAAATC+AGG | - | chr7.1:42105671-42105690 | None:intergenic | 40.0% | |
| GCAAATGCATCATCATTGGA+TGG | + | chr7.1:42108805-42108824 | MS.gene65145:intron | 40.0% | |
| GGAACTGCAGTGGATAATAA+TGG | + | chr7.1:42109023-42109042 | MS.gene65145:CDS | 40.0% | |
| GGTTGTGAAAATTGTTGTGG+AGG | - | chr7.1:42106694-42106713 | None:intergenic | 40.0% | |
| GTGAGAATTCTGTGTCTGTA+TGG | - | chr7.1:42107295-42107314 | None:intergenic | 40.0% | |
| GTTGCTGATCCTTACACAAA+TGG | + | chr7.1:42106739-42106758 | MS.gene65145:CDS | 40.0% | |
| TCTGATCCACTTGCAAGATT+AGG | + | chr7.1:42107111-42107130 | MS.gene65145:CDS | 40.0% | |
| TGAATCCTCGGATTAAACCA+TGG | + | chr7.1:42108524-42108543 | MS.gene65145:intron | 40.0% | |
| TGATAAGGGGAGTTAAAGTG+AGG | + | chr7.1:42108919-42108938 | MS.gene65145:CDS | 40.0% | |
| TGATAGTCATTAGTAGCAGC+AGG | - | chr7.1:42106796-42106815 | None:intergenic | 40.0% | |
| TTCTTCATCTGCAGCTTCTT+GGG | + | chr7.1:42105784-42105803 | MS.gene65145:intron | 40.0% | |
| TTGAAACACGCATTCGATTC+AGG | - | chr7.1:42106634-42106653 | None:intergenic | 40.0% | |
| TTGATGCATTATTCCCATGC+TGG | - | chr7.1:42108995-42109014 | None:intergenic | 40.0% | |
| TTGTGTGTGACGGTGTAAAT+GGG | + | chr7.1:42106251-42106270 | MS.gene65145:CDS | 40.0% | |
| TTTGTGTGTGACGGTGTAAA+TGG | + | chr7.1:42106250-42106269 | MS.gene65145:CDS | 40.0% | |
| ! | AATGATGTTGTTGTTGGTGG+TGG | + | chr7.1:42105974-42105993 | MS.gene65145:CDS | 40.0% |
| ! | AGGAACCTCAAGTTCTTTTC+AGG | - | chr7.1:42107756-42107775 | None:intergenic | 40.0% |
| ! | ATGTACTTGCTAGAGAACAC+TGG | + | chr7.1:42108174-42108193 | MS.gene65145:CDS | 40.0% |
| ! | ATGTATTGGCAGACTATGAC+TGG | + | chr7.1:42107195-42107214 | MS.gene65145:CDS | 40.0% |
| ! | ATTAGTTGAACCGGTTGGTT+TGG | - | chr7.1:42108497-42108516 | None:intergenic | 40.0% |
| ! | CGATGATAGTGCATGATGAT+AGG | + | chr7.1:42106179-42106198 | MS.gene65145:CDS | 40.0% |
| ! | CTAGCTTCTTTTGTAGCAGA+AGG | - | chr7.1:42107009-42107028 | None:intergenic | 40.0% |
| ! | CTTCTTGGAGCATCAGATAT+TGG | + | chr7.1:42108133-42108152 | MS.gene65145:intron | 40.0% |
| ! | GAAGATGATGATGACATGCA+TGG | - | chr7.1:42105680-42105699 | None:intergenic | 40.0% |
| ! | TCCTCGATATTCACTTGTTG+CGG | - | chr7.1:42106214-42106233 | None:intergenic | 40.0% |
| ! | TGAGTATGGTTTTCTTGGAG+TGG | + | chr7.1:42106329-42106348 | MS.gene65145:CDS | 40.0% |
| ! | TGGTTCAATCGATTCAGCAA+TGG | - | chr7.1:42108628-42108647 | None:intergenic | 40.0% |
| !! | AATGGGGAAGAGAGTATTCA+AGG | + | chr7.1:42106268-42106287 | MS.gene65145:CDS | 40.0% |
| !! | AGATTAGGTGGTGGAAAAGA+AGG | + | chr7.1:42106436-42106455 | MS.gene65145:CDS | 40.0% |
| !! | GAAAGTGCTGCTAAGAGATT+AGG | + | chr7.1:42106421-42106440 | MS.gene65145:CDS | 40.0% |
| !! | GACGATGTTTTTGTGTGTGA+CGG | + | chr7.1:42106241-42106260 | MS.gene65145:CDS | 40.0% |
| !! | GATTAGGTGGTGGAAAAGAA+GGG | + | chr7.1:42106437-42106456 | MS.gene65145:CDS | 40.0% |
| !! | GCAGTTGATGACAAAGTTGT+TGG | - | chr7.1:42105905-42105924 | None:intergenic | 40.0% |
| !! | GTTGATGACAAAGTTGTTGG+AGG | - | chr7.1:42105902-42105921 | None:intergenic | 40.0% |
| !!! | GGTTTTGAAGCAAAGTGATG+TGG | + | chr7.1:42107785-42107804 | MS.gene65145:CDS | 40.0% |
| AAAGTGATGTGGGAAGTCTG+GGG | + | chr7.1:42107796-42107815 | MS.gene65145:CDS | 45.0% | |
| AACCTCATCAACCTATCACC+AGG | - | chr7.1:42106982-42107001 | None:intergenic | 45.0% | |
| AATTGCACCAATGTTGCTGC+TGG | + | chr7.1:42107144-42107163 | MS.gene65145:CDS | 45.0% | |
| ACAGACACAGAATTCTCACC+AGG | + | chr7.1:42107296-42107315 | MS.gene65145:CDS | 45.0% | |
| ACCAACCATGGTTTAATCCG+AGG | - | chr7.1:42108532-42108551 | None:intergenic | 45.0% | |
| ACCGCAACAAGTGAATATCG+AGG | + | chr7.1:42106210-42106229 | MS.gene65145:CDS | 45.0% | |
| ACTAGCAGAGGAAGAAGAAG+AGG | - | chr7.1:42105765-42105784 | None:intergenic | 45.0% | |
| AGTCATTAGTAGCAGCAGGT+TGG | - | chr7.1:42106792-42106811 | None:intergenic | 45.0% | |
| ATCCAACCGTCTGAATTGCT+TGG | + | chr7.1:42108777-42108796 | MS.gene65145:intron | 45.0% | |
| ATTGGCAGACTATGACTGGT+GGG | + | chr7.1:42107199-42107218 | MS.gene65145:CDS | 45.0% | |
| CAAAGTGATGTGGGAAGTCT+GGG | + | chr7.1:42107795-42107814 | MS.gene65145:CDS | 45.0% | |
| CAACCGTCTAAATTGACCCT+TGG | + | chr7.1:42108699-42108718 | MS.gene65145:intron | 45.0% | |
| CAAGGGTCAATTTAGACGGT+TGG | - | chr7.1:42108701-42108720 | None:intergenic | 45.0% | |
| CAGACACAGAATTCTCACCA+GGG | + | chr7.1:42107297-42107316 | MS.gene65145:CDS | 45.0% | |
| CTACGATATCCGCAGACAAA+TGG | - | chr7.1:42107579-42107598 | None:intergenic | 45.0% | |
| CTAGAAAGAAGAGGATGGCT+CGG | + | chr7.1:42107025-42107044 | MS.gene65145:CDS | 45.0% | |
| CTCAAGCCAAGCAATTCAGA+CGG | - | chr7.1:42108786-42108805 | None:intergenic | 45.0% | |
| GATCCACTTGCAAGATTAGG+TGG | + | chr7.1:42107114-42107133 | MS.gene65145:CDS | 45.0% | |
| GATGCCTTGTCTCAATCCAA+GGG | - | chr7.1:42108718-42108737 | None:intergenic | 45.0% | |
| GCAACAAGGAACAAAACCAG+AGG | + | chr7.1:42108941-42108960 | MS.gene65145:CDS | 45.0% | |
| GCAACAAGTTCAAGTGCAAG+AGG | + | chr7.1:42106129-42106148 | MS.gene65145:CDS | 45.0% | |
| GGAAGCCTGAAAAGAACTTG+AGG | + | chr7.1:42107748-42107767 | MS.gene65145:CDS | 45.0% | |
| GGAGTTAAAGTGAGGCAACA+AGG | + | chr7.1:42108927-42108946 | MS.gene65145:CDS | 45.0% | |
| GGCGGTTTATGTCTCATCAT+AGG | + | chr7.1:42107052-42107071 | MS.gene65145:CDS | 45.0% | |
| GGTGACTTTGTGAAGGCTAA+TGG | + | chr7.1:42108280-42108299 | MS.gene65145:intron | 45.0% | |
| GGTGGTTCTCATACAAATCC+AGG | + | chr7.1:42107165-42107184 | MS.gene65145:CDS | 45.0% | |
| GTGTCTCGGCAAATGATTTG+AGG | + | chr7.1:42106371-42106390 | MS.gene65145:CDS | 45.0% | |
| GTTCTTCATCTGCAGCTTCT+TGG | + | chr7.1:42105783-42105802 | MS.gene65145:intron | 45.0% | |
| TATTGGCAGACTATGACTGG+TGG | + | chr7.1:42107198-42107217 | MS.gene65145:CDS | 45.0% | |
| TCACAACCAATGGTTGGAGT+TGG | + | chr7.1:42106706-42106725 | MS.gene65145:CDS | 45.0% | |
| TCCACAAACCTGTCTCCTAT+CGG | - | chr7.1:42107334-42107353 | None:intergenic | 45.0% | |
| TCCTCGGATTAAACCATGGT+TGG | + | chr7.1:42108528-42108547 | MS.gene65145:intron | 45.0% | |
| TCTAGTGAGACCTCAAGCAA+TGG | - | chr7.1:42108656-42108675 | None:intergenic | 45.0% | |
| TGATGCCTTGTCTCAATCCA+AGG | - | chr7.1:42108719-42108738 | None:intergenic | 45.0% | |
| TGCAGATGAAGAACTAGCAG+AGG | - | chr7.1:42105777-42105796 | None:intergenic | 45.0% | |
| TGCCAATACATCCAGTTACC+TGG | - | chr7.1:42107186-42107205 | None:intergenic | 45.0% | |
| TGTGTGTGACGGTGTAAATG+GGG | + | chr7.1:42106252-42106271 | MS.gene65145:CDS | 45.0% | |
| TTGACCCTTGGATTGAGACA+AGG | + | chr7.1:42108711-42108730 | MS.gene65145:intron | 45.0% | |
| ! | AGTGCTGCTAAGAGATTAGG+TGG | + | chr7.1:42106424-42106443 | MS.gene65145:CDS | 45.0% |
| ! | TATCAGTTGTTTCCTGGTCC+TGG | + | chr7.1:42106961-42106980 | MS.gene65145:CDS | 45.0% |
| ! | TGTTGTGGAGGTACAATGAG+AGG | - | chr7.1:42106682-42106701 | None:intergenic | 45.0% |
| !! | AAGGCTAATGGACTCCAAGA+AGG | + | chr7.1:42108292-42108311 | MS.gene65145:CDS | 45.0% |
| !! | GGCTTTAGAAGTCTCTGCAA+GGG | + | chr7.1:42107523-42107542 | MS.gene65145:intron | 45.0% |
| !! | GGTGATAGGTTGATGAGGTT+AGG | + | chr7.1:42106982-42107001 | MS.gene65145:CDS | 45.0% |
| !! | TAGTAGCAGCAGGTTGGTAA+GGG | - | chr7.1:42106786-42106805 | None:intergenic | 45.0% |
| !! | TGGCTTTAGAAGTCTCTGCA+AGG | + | chr7.1:42107522-42107541 | MS.gene65145:intron | 45.0% |
| !! | TTAGTAGCAGCAGGTTGGTA+AGG | - | chr7.1:42106787-42106806 | None:intergenic | 45.0% |
| !!! | GCTGTGTTTTGGTTCTGACA+TGG | - | chr7.1:42106598-42106617 | None:intergenic | 45.0% |
| AGAACCACCAGCAGCAACAT+TGG | - | chr7.1:42107154-42107173 | None:intergenic | 50.0% | |
| AGCCAAGCAATTCAGACGGT+TGG | - | chr7.1:42108782-42108801 | None:intergenic | 50.0% | |
| ATCAACCTATCACCAGGACC+AGG | - | chr7.1:42106976-42106995 | None:intergenic | 50.0% | |
| CCAACTCCAACTCCAACCAT+TGG | - | chr7.1:42106715-42106734 | None:intergenic | 50.0% | |
| CCAATGGTTGGAGTTGGAGT+TGG | + | chr7.1:42106712-42106731 | MS.gene65145:CDS | 50.0% | |
| CCACAAACCTGTCTCCTATC+GGG | - | chr7.1:42107333-42107352 | None:intergenic | 50.0% | |
| CCACCACCTAATCTTGCAAG+TGG | - | chr7.1:42107120-42107139 | None:intergenic | 50.0% | |
| CCACTTGCAAGATTAGGTGG+TGG | + | chr7.1:42107117-42107136 | MS.gene65145:CDS | 50.0% | |
| CCAGAATTGGAGGCAAGAGA+TGG | + | chr7.1:42107947-42107966 | MS.gene65145:CDS | 50.0% | |
| CCATCTCTTGCCTCCAATTC+TGG | - | chr7.1:42107950-42107969 | None:intergenic | 50.0% | |
| GCAAAGTGATGTGGGAAGTC+TGG | + | chr7.1:42107794-42107813 | MS.gene65145:CDS | 50.0% | |
| GCTGCTAAGAGATTAGGTGG+TGG | + | chr7.1:42106427-42106446 | MS.gene65145:CDS | 50.0% | |
| GGGCATAGCAACCACAATTG+TGG | + | chr7.1:42107543-42107562 | MS.gene65145:intron | 50.0% | |
| TGTTTCCTGGTCCTGGTGAT+AGG | + | chr7.1:42106968-42106987 | MS.gene65145:CDS | 50.0% | |
| TTCCTTGGCTCCTGTTGTTC+CGG | + | chr7.1:42107230-42107249 | MS.gene65145:CDS | 50.0% | |
| !! | GTCCTGGTGATAGGTTGATG+AGG | + | chr7.1:42106977-42106996 | MS.gene65145:CDS | 50.0% |
| !! | TGTTGGTGGTGGTGATTGCA+TGG | + | chr7.1:42105985-42106004 | MS.gene65145:CDS | 50.0% |
| AAGTGCACCCGATAGGAGAC+AGG | + | chr7.1:42107323-42107342 | MS.gene65145:CDS | 55.0% | |
| CCCGATAGGAGACAGGTTTG+TGG | + | chr7.1:42107330-42107349 | MS.gene65145:intron | 55.0% | |
| GTCTCCTATCGGGTGCACTT+CGG | - | chr7.1:42107323-42107342 | None:intergenic | 55.0% | |
| TGCACCAATGTTGCTGCTGG+TGG | + | chr7.1:42107147-42107166 | MS.gene65145:CDS | 55.0% | |
| ! | AGAAGAGGATGGCTCGGCAA+CGG | + | chr7.1:42107031-42107050 | MS.gene65145:CDS | 55.0% |
| AGCCGGAACAACAGGAGCCA+AGG | - | chr7.1:42107235-42107254 | None:intergenic | 60.0% | |
| CGATCTACTGCAGGCTGCGT+CGG | - | chr7.1:42107261-42107280 | None:intergenic | 60.0% | |
| GGGCGATCACGATCTACTGC+AGG | - | chr7.1:42107270-42107289 | None:intergenic | 60.0% | |
| TGGTGGGACAGCAGCTTCCT+TGG | + | chr7.1:42107215-42107234 | MS.gene65145:CDS | 60.0% | |
| AGGGCCGAAGTGCACCCGAT+AGG | + | chr7.1:42107316-42107335 | MS.gene65145:CDS | 65.0% | |
| TATCGGGTGCACTTCGGCCC+TGG | - | chr7.1:42107317-42107336 | None:intergenic | 65.0% | |
| ! | AGAGGATGGCTCGGCAACGG+CGG | + | chr7.1:42107034-42107053 | MS.gene65145:CDS | 65.0% |
| ! | GTCGGCTCAGCCGGAACAAC+AGG | - | chr7.1:42107243-42107262 | None:intergenic | 65.0% |
| !! | GCAGGCTGCGTCGGCTCAGC+CGG | - | chr7.1:42107252-42107271 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 42105491 | 42109076 | 42105491 | ID=MS.gene65145 |
| chr7.1 | mRNA | 42105491 | 42109076 | 42105491 | ID=MS.gene65145.t1;Parent=MS.gene65145 |
| chr7.1 | exon | 42105491 | 42105737 | 42105491 | ID=MS.gene65145.t1.exon1;Parent=MS.gene65145.t1 |
| chr7.1 | CDS | 42105491 | 42105737 | 42105491 | ID=cds.MS.gene65145.t1;Parent=MS.gene65145.t1 |
| chr7.1 | exon | 42105822 | 42107344 | 42105822 | ID=MS.gene65145.t1.exon2;Parent=MS.gene65145.t1 |
| chr7.1 | CDS | 42105822 | 42107344 | 42105822 | ID=cds.MS.gene65145.t1;Parent=MS.gene65145.t1 |
| chr7.1 | exon | 42107744 | 42107836 | 42107744 | ID=MS.gene65145.t1.exon3;Parent=MS.gene65145.t1 |
| chr7.1 | CDS | 42107744 | 42107836 | 42107744 | ID=cds.MS.gene65145.t1;Parent=MS.gene65145.t1 |
| chr7.1 | exon | 42107926 | 42108026 | 42107926 | ID=MS.gene65145.t1.exon4;Parent=MS.gene65145.t1 |
| chr7.1 | CDS | 42107926 | 42108026 | 42107926 | ID=cds.MS.gene65145.t1;Parent=MS.gene65145.t1 |
| chr7.1 | exon | 42108143 | 42108195 | 42108143 | ID=MS.gene65145.t1.exon5;Parent=MS.gene65145.t1 |
| chr7.1 | CDS | 42108143 | 42108195 | 42108143 | ID=cds.MS.gene65145.t1;Parent=MS.gene65145.t1 |
| chr7.1 | exon | 42108281 | 42108357 | 42108281 | ID=MS.gene65145.t1.exon6;Parent=MS.gene65145.t1 |
| chr7.1 | CDS | 42108281 | 42108357 | 42108281 | ID=cds.MS.gene65145.t1;Parent=MS.gene65145.t1 |
| chr7.1 | exon | 42108918 | 42109076 | 42108918 | ID=MS.gene65145.t1.exon7;Parent=MS.gene65145.t1 |
| chr7.1 | CDS | 42108918 | 42109076 | 42108918 | ID=cds.MS.gene65145.t1;Parent=MS.gene65145.t1 |
| Gene Sequence |
| Protein sequence |
