AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene65540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65540.t1 MTR_6g033340 91.281 734 51 2 1 722 1 733 0.0 1370
MS.gene65540.t1 MTR_6g033350 89.754 771 72 3 723 1490 9 775 0.0 1361
MS.gene65540.t1 MTR_1g095570 49.590 1343 577 30 1 1310 1 1276 0.0 1087
MS.gene65540.t1 MTR_1g095570 43.478 161 56 7 1320 1464 1361 1502 3.32e-20 98.6
MS.gene65540.t1 MTR_1g095570 47.884 898 389 19 438 1310 1 844 0.0 701
MS.gene65540.t1 MTR_1g095570 43.478 161 56 7 1320 1464 929 1070 2.26e-20 99.0
MS.gene65540.t1 MTR_6g033345 70.539 241 70 1 889 1129 2 241 1.67e-97 313
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65540.t1 AT3G52250 34.059 1057 604 25 142 1158 238 1241 7.55e-129 439
MS.gene65540.t1 AT3G52250 41.509 159 84 6 9 162 9 163 7.05e-18 90.9
MS.gene65540.t1 AT3G52250 34.059 1057 604 25 142 1158 238 1241 7.55e-129 439
MS.gene65540.t1 AT3G52250 41.509 159 84 6 9 162 9 163 7.05e-18 90.9

Find 347 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGTTTCTTGTGAGATTT+TGG 0.134420 6.4:+6017781 None:intergenic
GTATTTACTACGTCGGAATT+TGG 0.141403 6.4:+6019666 None:intergenic
GTTTGGAAAAGCTGCAAATT+TGG 0.153589 6.4:-6018805 MS.gene65540:CDS
GCTTAATTCCCTGTACTTAT+AGG 0.155919 6.4:-6018182 MS.gene65540:CDS
GAAGATGCCAGCATTAATTT+TGG 0.173904 6.4:-6012792 MS.gene65540:CDS
TTGGGTGTATCTTCTGAATT+TGG 0.181231 6.4:+6011009 None:intergenic
CTAAGAAGCCTAGGTTAAAT+TGG 0.191299 6.4:-6019326 MS.gene65540:CDS
TGGCACTTGAATTAGGCTTC+TGG 0.217500 6.4:+6010944 None:intergenic
CCTGCGCCTCCTGAAACTTT+TGG 0.237189 6.4:+6019168 None:intergenic
CTTCTTCTGATGACTATTAT+TGG 0.246970 6.4:+6017741 None:intergenic
TTTCTCTTGGCACTTGAATT+AGG 0.251600 6.4:+6010937 None:intergenic
GATAAAAGCCCAAAAGTTTC+AGG 0.253799 6.4:-6019177 MS.gene65540:CDS
ATTTCGGATAGCACAGAAAT+TGG 0.255523 6.4:-6011492 MS.gene65540:CDS
TTACTGGATTCCATATTAAA+AGG 0.266342 6.4:+6019222 None:intergenic
TGATGGTTCTTCTGAGCTTC+GGG 0.268992 6.4:-6011361 MS.gene65540:CDS
CGCATGTCGTCATCTATAAA+TGG 0.276143 6.4:+6010649 None:intergenic
CTCCATGCTCTATCATCTTT+CGG 0.288539 6.4:-6011996 MS.gene65540:CDS
AAAATGCCCTGCACTGGAAT+TGG 0.292910 6.4:+6011931 None:intergenic
ACACCCAATGTGAAAATATT+CGG 0.296339 6.4:-6010994 MS.gene65540:CDS
CCAGAGTGCTATAGTTATTT+CGG 0.297884 6.4:-6011508 MS.gene65540:CDS
ATTTCATACTTGACGGTATC+AGG 0.298242 6.4:+6012471 None:intergenic
CTGATGGTTCTTCTGAGCTT+CGG 0.299024 6.4:-6011362 MS.gene65540:CDS
GGCACTTGAATTAGGCTTCT+GGG 0.305345 6.4:+6010945 None:intergenic
TCATGATGGCACATTCATTA+TGG 0.306095 6.4:-6017926 MS.gene65540:CDS
GCCTGCATTCTCACCACTTC+CGG 0.312753 6.4:-6010788 MS.gene65540:CDS
GCCAGGATTGAGGAAATTAC+TGG 0.313227 6.4:+6019206 None:intergenic
CATGGGAGTTCGGAGTCTTT+AGG 0.319006 6.4:-6020697 MS.gene65540:CDS
TCATCGAAGTTCTTGAATCT+TGG 0.319044 6.4:+6011253 None:intergenic
GGACTGCGATGTTGAAAATT+CGG 0.328924 6.4:-6018784 MS.gene65540:CDS
TACAGAATTGGTGTCTGATA+TGG 0.335594 6.4:-6011436 MS.gene65540:CDS
CGGTGATAATAATTCATCTT+TGG 0.339436 6.4:-6018136 MS.gene65540:CDS
TTGACTGGAAGCCACTTAAA+TGG 0.341863 6.4:-6019542 MS.gene65540:CDS
GGATTTCAATGCTCCCTATA+CGG 0.343004 6.4:-6010767 MS.gene65540:CDS
AAAGTATGAAAGGGGAAATA+AGG 0.343807 6.4:-6019832 MS.gene65540:CDS
TAAGAAGCCTAGGTTAAATT+GGG 0.345550 6.4:-6019325 MS.gene65540:CDS
TGTCTCAAGAACAATAATAT+TGG 0.345719 6.4:-6017970 MS.gene65540:CDS
GGTGCAGATGATAAATTGTT+TGG 0.345931 6.4:-6018822 MS.gene65540:CDS
AAATGAAAGACCAACATAAT+AGG 0.346313 6.4:-6019629 MS.gene65540:CDS
TCGGGTCGTTCACCTGGTCC+TGG 0.348043 6.4:-6018765 MS.gene65540:CDS
GATCGGCAGTGAATCTAAAC+TGG 0.349783 6.4:-6011589 MS.gene65540:CDS
TGAGCTTCGGGGACATGAAT+TGG 0.357321 6.4:-6011349 MS.gene65540:CDS
ATGGAGGGGTTATGATAATA+AGG 0.360054 6.4:-6012345 MS.gene65540:CDS
GCCAAGAGAAATGAAGAAAA+TGG 0.367721 6.4:-6010925 MS.gene65540:CDS
ATGTGATAGGGATAGTTCTC+TGG 0.368355 6.4:-6019571 MS.gene65540:CDS
AAGTGAATCAATTTCAGTTT+CGG 0.370982 6.4:+6018542 None:intergenic
AAGTTTCTTGGTCCATATCT+TGG 0.374194 6.4:+6012084 None:intergenic
TGAATAATAGCATGACTGTT+TGG 0.377217 6.4:+6012287 None:intergenic
CTGAATTTGGCAAACACTGC+GGG 0.378250 6.4:+6011022 None:intergenic
TTAGAATTTGTCTCTTCAAA+TGG 0.378773 6.4:+6019345 None:intergenic
GGTTTATGACAATGATTTCC+AGG 0.380130 6.4:-6010863 MS.gene65540:CDS
ATTGATTCATTGACTAGGTT+GGG 0.384484 6.4:-6018693 MS.gene65540:CDS
ATCTGATAAGAAGCTGTATC+AGG 0.384799 6.4:-6011724 MS.gene65540:CDS
GACTGCGATGTTGAAAATTC+GGG 0.385656 6.4:-6018783 MS.gene65540:CDS
CAGATGGCATTGCGCTTAAT+CGG 0.386249 6.4:-6012391 MS.gene65540:CDS
GCCAGTCACCACCCAAGATA+TGG 0.387128 6.4:-6012096 MS.gene65540:CDS
TTCTGCTGCTGAGGGTAGAC+TGG 0.387774 6.4:-6011388 MS.gene65540:CDS
GTGTTCCCATCACCCGTATA+GGG 0.391328 6.4:+6010754 None:intergenic
TCTCGTCGGAACAAGTTTCT+TGG 0.392946 6.4:+6012072 None:intergenic
TCTACAAATTTAGATCTTGT+AGG 0.395415 6.4:+6018303 None:intergenic
AAATGCCCTGCACTGGAATT+GGG 0.398425 6.4:+6011932 None:intergenic
GTTTGGATTCTGAGAGTAGT+TGG 0.400865 6.4:+6012837 None:intergenic
GTACAGGTCAAAGATGTGAT+AGG 0.405139 6.4:-6019584 MS.gene65540:CDS
CACCCAATGTGAAAATATTC+GGG 0.406635 6.4:-6010993 MS.gene65540:CDS
AGACGTGACGTGGGGAGATA+TGG 0.406882 6.4:-6018252 MS.gene65540:CDS
TACAGATGTTGTAATTGAAT+TGG 0.409060 6.4:-6011286 MS.gene65540:CDS
CGACGAGAGCTGTGGTGAAA+TGG 0.409152 6.4:-6012057 MS.gene65540:CDS
AGGATACTTCGCGAGCAATA+TGG 0.409931 6.4:+6010696 None:intergenic
CTTAGGAGGGACAAATTTGT+TGG 0.411409 6.4:-6019463 MS.gene65540:CDS
TCTAACTTGCTTGACAATCC+TGG 0.412138 6.4:-6018327 MS.gene65540:CDS
GAATTCCATTTCATACTTGA+CGG 0.413629 6.4:+6012464 None:intergenic
AGAGAGGAAGCATGGGAGTT+CGG 0.413657 6.4:-6020707 MS.gene65540:CDS
TTCGACAGCGGTTGGCTCTC+TGG 0.415388 6.4:-6018469 MS.gene65540:CDS
GCGAAGTATCCTGCTGCATT+TGG 0.415607 6.4:-6010685 MS.gene65540:CDS
AGTTTCTTGGTCCATATCTT+GGG 0.416087 6.4:+6012085 None:intergenic
AACATGTGCTCACGTTCTAC+TGG 0.416666 6.4:+6019921 None:intergenic
CTAGAGACTGCATTAATCAT+AGG 0.419249 6.4:+6018273 None:intergenic
TCAGGAAGAATCTAATCCTT+TGG 0.421416 6.4:-6011706 MS.gene65540:CDS
TACACCTTGCAGCTCTTCAC+CGG 0.423552 6.4:-6019118 MS.gene65540:CDS
AGCTGCAAACAAACTAAGAT+TGG 0.424695 6.4:-6012891 MS.gene65540:CDS
GCTTCTGAGAATGTCATGTT+TGG 0.426105 6.4:+6012820 None:intergenic
TTGGAGAAATTTGCTGCCAT+TGG 0.427892 6.4:-6012647 MS.gene65540:CDS
AATCTAATCCTTTGGAAGCT+AGG 0.427906 6.4:-6011698 MS.gene65540:CDS
CCATTGGCTGAACCTGTCTC+TGG 0.430558 6.4:+6011789 None:intergenic
TGGTAATTGCTTTGAAGACT+TGG 0.433361 6.4:-6018232 MS.gene65540:CDS
ATGGATAGTGTTAATCGGTT+TGG 0.433686 6.4:-6019606 MS.gene65540:CDS
GGAAGCTGTGAAGGGAAGGA+TGG 0.434270 6.4:-6019441 MS.gene65540:CDS
TATTGATTCATTGACTAGGT+TGG 0.436173 6.4:-6018694 MS.gene65540:CDS
TGATACCGTCAAGTATGAAA+TGG 0.436875 6.4:-6012469 MS.gene65540:CDS
CTGATCCTGTGAAAGGCAAA+AGG 0.438936 6.4:-6012166 MS.gene65540:CDS
AGCTGGAGTTGTCGGATCAC+CGG 0.445703 6.4:-6011862 MS.gene65540:CDS
ATTCCGACGTAGTAAATACT+TGG 0.446307 6.4:-6019662 MS.gene65540:CDS
GGGAGGTGCTGTTACAGAAT+TGG 0.447224 6.4:-6011448 MS.gene65540:CDS
TCTCCATTCTCTGTGGCTAA+AGG 0.448207 6.4:+6019797 None:intergenic
ATATTAAAAGGAGGTGAGAC+AGG 0.448888 6.4:+6019234 None:intergenic
AAATCTTGTGATAAACATGT+TGG 0.450717 6.4:-6018432 MS.gene65540:CDS
CTCTGGCTATTGAGAAAGAA+AGG 0.451886 6.4:-6012712 MS.gene65540:CDS
CTGTGAAAGGCAAAAGGGTC+AGG 0.452467 6.4:-6012160 MS.gene65540:CDS
CTCTGGTGCTGGACAGTACC+AGG 0.452680 6.4:+6011525 None:intergenic
GATAATAAGGCCAGGTCAAA+GGG 0.453750 6.4:-6012332 MS.gene65540:CDS
GACGACATGCGGAGAGCAAA+TGG 0.453906 6.4:-6010637 MS.gene65540:CDS
GAAGACCGCATGAGTTTAAT+CGG 0.457127 6.4:-6020627 MS.gene65540:CDS
CTTAATCGGAAAATGCGTTC+AGG 0.458740 6.4:-6012377 MS.gene65540:CDS
CCGCATGAGTTTAATCGGTC+TGG 0.459889 6.4:-6020622 MS.gene65540:CDS
TCCAGTAATTTCCTCAATCC+TGG 0.460282 6.4:-6019207 MS.gene65540:CDS
TGATAATAATTCATCTTTGG+AGG 0.460773 6.4:-6018133 MS.gene65540:CDS
ATGATGATGTGGATGGTGGC+AGG 0.460790 6.4:-6011836 MS.gene65540:CDS
GCTGGAGTTGTCGGATCACC+GGG 0.462118 6.4:-6011861 MS.gene65540:CDS
AATTAATGCTGGCATCTTCA+AGG 0.463472 6.4:+6012796 None:intergenic
AATTTAGATCTTGTAGGTCC+AGG 0.464513 6.4:+6018309 None:intergenic
TCGATCTTGTGACAAGAAGT+TGG 0.466904 6.4:-6019895 MS.gene65540:CDS
ATAGGATGGATAGTGTTAAT+CGG 0.469489 6.4:-6019611 MS.gene65540:CDS
CGGGTCGTTCACCTGGTCCT+GGG 0.470086 6.4:-6018764 MS.gene65540:CDS
ACACAAGCTTACTGTCTACT+AGG 0.471389 6.4:-6017813 MS.gene65540:CDS
TTCAGGACGTTCCCTATGGA+GGG 0.471838 6.4:-6012360 MS.gene65540:CDS
CTGCTCTAATTCTGCTGCTG+AGG 0.473036 6.4:-6011397 MS.gene65540:CDS
AGGATCAGCTGAACTAGTTA+TGG 0.473205 6.4:+6012181 None:intergenic
TGTGTTCCCATCACCCGTAT+AGG 0.473642 6.4:+6010753 None:intergenic
ACAGAATTGGTGTCTGATAT+GGG 0.477056 6.4:-6011435 MS.gene65540:CDS
GGTGAAAGAGCTGGAGTTGT+CGG 0.478577 6.4:-6011870 MS.gene65540:CDS
TAACTATAGCACTCTGGTGC+TGG 0.478994 6.4:+6011514 None:intergenic
TTCATTCAATTTAGAGAAGG+TGG 0.479515 6.4:-6018718 MS.gene65540:CDS
AGTGTTAATCGGTTTGGTAC+AGG 0.479906 6.4:-6019600 MS.gene65540:CDS
GATCAATCCGAGGAAATTAA+CGG 0.480024 6.4:-6011657 MS.gene65540:CDS
ATGGAGGAACTCGCTGCCTC+AGG 0.480085 6.4:+6012200 None:intergenic
AATATGTCCAGGAGGCAAAC+TGG 0.481534 6.4:-6019741 MS.gene65540:CDS
GAACCTTTAGCCACAGAGAA+TGG 0.482821 6.4:-6019800 MS.gene65540:CDS
GGCAGCATGCCTATAAGTAC+AGG 0.483019 6.4:+6018173 None:intergenic
CTTCTGATGACTATTATTGG+TGG 0.483268 6.4:+6017744 None:intergenic
ACTTGCACCAGTTTGCCTCC+TGG 0.483405 6.4:+6019734 None:intergenic
ATCTTCTGATGACCTTGTTG+TGG 0.483739 6.4:-6018367 MS.gene65540:CDS
TCAAGTGGCATGAGGAGCTT+AGG 0.483808 6.4:-6019480 MS.gene65540:CDS
AAGACGATCAGCAAGATTGA+AGG 0.484063 6.4:-6017887 MS.gene65540:CDS
TGATAATAAGGCCAGGTCAA+AGG 0.485202 6.4:-6012333 MS.gene65540:CDS
TCCATATCTTGGGTGGTGAC+TGG 0.485485 6.4:+6012095 None:intergenic
TGGGCTGGTTGAAGATCCTC+TGG 0.485490 6.4:-6012729 MS.gene65540:CDS
CACTATCCATCCTATTATGT+TGG 0.487422 6.4:+6019619 None:intergenic
CTTCTCCACATCTGTCCAAT+CGG 0.488126 6.4:+6012028 None:intergenic
TAATGCAGCTGCTGATACAT+TGG 0.488819 6.4:-6012249 MS.gene65540:CDS
GATCTCATGGGTGAAAGAGC+TGG 0.490424 6.4:-6011879 MS.gene65540:CDS
CCGCTGTTGTCTTGTGGTCA+AGG 0.491935 6.4:+6012597 None:intergenic
GAAAATTCGGGTCGTTCACC+TGG 0.493680 6.4:-6018771 MS.gene65540:CDS
TCAAGCAAGTTAGAAGAAAG+AGG 0.494568 6.4:+6018336 None:intergenic
CCTGGATCTTCACGAGACTC+TGG 0.495814 6.4:-6019513 MS.gene65540:CDS
TGCTCTATCATCTTTCGGTA+AGG 0.495947 6.4:-6011991 MS.gene65540:CDS
ATTGATCTGACTCGGCTGAC+AGG 0.496082 6.4:+6011673 None:intergenic
GTCGCTGGAGCCGATACCCT+TGG 0.496140 6.4:-6020752 MS.gene65540:CDS
ACGCATTGGAATGGATCTCA+TGG 0.497330 6.4:-6011892 MS.gene65540:CDS
GATTTCAATGCTCCCTATAC+GGG 0.498305 6.4:-6010766 MS.gene65540:CDS
TTCTGAAGGTCATCGTAGGA+TGG 0.498503 6.4:-6019961 MS.gene65540:intron
CCAGGTCGGGTCCATTTAAG+TGG 0.500301 6.4:+6019531 None:intergenic
GCCAATGGCTCTGATACGTC+AGG 0.500332 6.4:-6011774 MS.gene65540:CDS
AAAGCTCGTCGTTGAGAGAG+AGG 0.501326 6.4:-6020723 MS.gene65540:CDS
CAAGATCCCAATTCCAGTGC+AGG 0.501661 6.4:-6011938 MS.gene65540:CDS
CCACTTAAATGGACCCGACC+TGG 0.502286 6.4:-6019531 MS.gene65540:CDS
GTTCTCTGGGTACAGTTGAC+TGG 0.503691 6.4:-6019557 MS.gene65540:CDS
AATGCTCCCTATACGGGTGA+TGG 0.504458 6.4:-6010760 MS.gene65540:CDS
TATTATCATAACCCCTCCAT+AGG 0.505263 6.4:+6012348 None:intergenic
TCTTGGGTGGTGACTGGCAT+CGG 0.505811 6.4:+6012101 None:intergenic
CTGCTGATGAGTCATATTCA+AGG 0.507101 6.4:-6019398 MS.gene65540:CDS
CCGTCATTCTCTCGAGGGGA+TGG 0.508388 6.4:-6019855 MS.gene65540:CDS
CCAGAGTCTCGTGAAGATCC+AGG 0.509576 6.4:+6019513 None:intergenic
GTCTCGTGAAGATCCAGGTC+GGG 0.510305 6.4:+6019518 None:intergenic
TACAGCTTCTTATCAGATGC+AGG 0.512245 6.4:+6011729 None:intergenic
TCTTTGTTTAAAGTTACCTC+AGG 0.512378 6.4:+6019261 None:intergenic
GAGCTGCAAGGTGTAGAAGA+TGG 0.515837 6.4:+6019126 None:intergenic
GAATAAGTTGATGTTATTGA+AGG 0.516443 6.4:-6018592 MS.gene65540:CDS
TGCAAGACTCACAAACGCAT+TGG 0.517176 6.4:-6011906 MS.gene65540:CDS
GAATCTAAACTGGGCACTGA+TGG 0.517510 6.4:-6011579 MS.gene65540:CDS
TGCGTTCAGGACGTTCCCTA+TGG 0.517909 6.4:-6012364 MS.gene65540:CDS
GCCTGACGTATCAGAGCCAT+TGG 0.518358 6.4:+6011773 None:intergenic
TTAGGCTTCTGGGTGGATGA+AGG 0.519936 6.4:+6010955 None:intergenic
TAAAGTCCAAGGGTTTATCA+TGG 0.521565 6.4:+6012688 None:intergenic
TTAAAGCATTGCAACACTTG+TGG 0.523604 6.4:-6017843 MS.gene65540:CDS
TCGTTGAGAGAGAGGAAGCA+TGG 0.523755 6.4:-6020715 MS.gene65540:CDS
TTAGGAGGGACAAATTTGTT+GGG 0.524901 6.4:-6019462 MS.gene65540:CDS
TAATTGATCATCTCAGATGT+TGG 0.525220 6.4:+6012866 None:intergenic
CGTTGAGAGAGAGGAAGCAT+GGG 0.528436 6.4:-6020714 MS.gene65540:CDS
GACTCACAAACGCATTGGAA+TGG 0.528455 6.4:-6011901 MS.gene65540:CDS
AATTTGTTGGGAAGCTGTGA+AGG 0.529111 6.4:-6019450 MS.gene65540:CDS
TTGGACTTTAGAAGAGAGAG+AGG 0.531532 6.4:-6012675 MS.gene65540:CDS
CCCATGGCTAGAACTCATGA+TGG 0.532113 6.4:+6010822 None:intergenic
TCTGACAAACCTGAGAATTG+AGG 0.532128 6.4:+6011147 None:intergenic
CCAAAAGTTTCAGGAGGCGC+AGG 0.533629 6.4:-6019168 MS.gene65540:CDS
GCCTAGGTTAAATTGGGGTG+AGG 0.535961 6.4:-6019319 MS.gene65540:CDS
CACAATCCGCTGTTGTCTTG+TGG 0.536241 6.4:+6012591 None:intergenic
CTTTAGGATCAGTAGCAAGA+TGG 0.536242 6.4:-6020681 MS.gene65540:CDS
AAAAGGACGACGACAAGCTA+GGG 0.537357 6.4:-6012517 MS.gene65540:CDS
CTCTCTCTTCTAAAGTCCAA+GGG 0.537540 6.4:+6012678 None:intergenic
GAATACTTCACTATCACCCT+TGG 0.537857 6.4:-6011232 MS.gene65540:CDS
CCATGGCTAGAACTCATGAT+GGG 0.538507 6.4:+6010823 None:intergenic
GAGGGTAGACTGGTTTCTGA+TGG 0.539296 6.4:-6011378 MS.gene65540:CDS
TGACTTTGAGACCCAGGACC+AGG 0.539807 6.4:+6018753 None:intergenic
GTATAGGGAGCATTGAAATC+CGG 0.540575 6.4:+6010769 None:intergenic
GATTTGATTATTGATGTCGC+TGG 0.540601 6.4:-6020767 None:intergenic
TTCTTGGTCCATATCTTGGG+TGG 0.540763 6.4:+6012088 None:intergenic
TCTCTCTCTTCTAAAGTCCA+AGG 0.540956 6.4:+6012677 None:intergenic
AGACAAATTCTAAGAAGCCT+AGG 0.541526 6.4:-6019335 MS.gene65540:CDS
TCTTGAACAAGATGCTTCCA+AGG 0.542554 6.4:+6011215 None:intergenic
GGGCATTGAAATCAATGCCC+TGG 0.543279 6.4:+6010845 None:intergenic
GCTTCGGGGACATGAATTGG+AGG 0.543979 6.4:-6011346 MS.gene65540:CDS
TATCTACTAAGCCAGGATTG+AGG 0.544556 6.4:+6019196 None:intergenic
ATAATAGTCATCAGAAGAAG+AGG 0.545200 6.4:-6017738 MS.gene65540:CDS
TGCTCTAATTCTGCTGCTGA+GGG 0.547011 6.4:-6011396 MS.gene65540:CDS
GTCATCGTAGGATGGGTAGT+TGG 0.547053 6.4:-6019953 MS.gene65540:CDS
GCGAGCAATATGGAAGAAGC+AGG 0.547361 6.4:+6010706 None:intergenic
ATCTCTAAAATCTAAATCTG+AGG 0.548295 6.4:-6018505 MS.gene65540:CDS
AATGCATGCATTCCAGAGAC+AGG 0.549741 6.4:-6011801 MS.gene65540:CDS
ACACCTTGCAGCTCTTCACC+GGG 0.549833 6.4:-6019117 MS.gene65540:intron
TCCGGAAGTGGTGAGAATGC+AGG 0.550666 6.4:+6010787 None:intergenic
AGGGGATGGAAAGTATGAAA+GGG 0.552486 6.4:-6019841 MS.gene65540:CDS
TGCAGTCTCTAGACGTGACG+TGG 0.553456 6.4:-6018262 MS.gene65540:CDS
GAAAAGATAAGCCGAGTGAA+GGG 0.556375 6.4:-6011470 MS.gene65540:CDS
GCAGCTTCAGTGACGGCAGA+TGG 0.556867 6.4:-6012407 MS.gene65540:CDS
TCTCTAAAATCTAAATCTGA+GGG 0.557513 6.4:-6018504 MS.gene65540:CDS
CCAGAGACAGGTTCAGCCAA+TGG 0.558171 6.4:-6011789 MS.gene65540:CDS
CATCAACTTATTCATTGTGG+TGG 0.558543 6.4:+6018602 None:intergenic
CAATTCTCAGGTTTGTCAGA+GGG 0.558911 6.4:-6011144 MS.gene65540:CDS
CAGGCTGTACTGTGCTCCCA+TGG 0.559128 6.4:+6010806 None:intergenic
GAAGCTGTGAAGGGAAGGAT+GGG 0.559485 6.4:-6019440 MS.gene65540:CDS
GATGGCACATTCATTATGGA+AGG 0.561372 6.4:-6017922 MS.gene65540:CDS
TACAGGTCAAAGATGTGATA+GGG 0.562106 6.4:-6019583 MS.gene65540:CDS
TGATCCTGTGAAAGGCAAAA+GGG 0.562771 6.4:-6012165 MS.gene65540:CDS
TGCTGATGAGTCATATTCAA+GGG 0.563689 6.4:-6019397 MS.gene65540:CDS
AGAATGGAGAGGACGTTCAT+CGG 0.563712 6.4:-6019784 MS.gene65540:CDS
CCGAAATAACTATAGCACTC+TGG 0.563773 6.4:+6011508 None:intergenic
AATGGTACCCATGATAATGC+TGG 0.564415 6.4:-6010907 MS.gene65540:CDS
TTCACACTGAATCTTGTGAC+AGG 0.566129 6.4:+6011120 None:intergenic
TGTGATAGGGATAGTTCTCT+GGG 0.567753 6.4:-6019570 MS.gene65540:CDS
GCTTCTTATCAGATGCAGGC+TGG 0.568078 6.4:+6011733 None:intergenic
TTCCTCGGATTGATCTGACT+CGG 0.570408 6.4:+6011665 None:intergenic
AGCTCCTCATGCCACTTGAA+CGG 0.570700 6.4:+6019484 None:intergenic
GGATCAGTAGCAAGATGGAG+AGG 0.571332 6.4:-6020676 MS.gene65540:CDS
GATACATTGGCTAGTATATG+TGG 0.571499 6.4:-6012236 MS.gene65540:CDS
CTTCTGGGTGGATGAAGGAA+TGG 0.571648 6.4:+6010960 None:intergenic
ATGCTCCCTATACGGGTGAT+GGG 0.572242 6.4:-6010759 MS.gene65540:CDS
GAGGGGATGGAAAGTATGAA+AGG 0.572665 6.4:-6019842 MS.gene65540:CDS
TCTGAAGGTCATCGTAGGAT+GGG 0.572715 6.4:-6019960 MS.gene65540:intron
AGATGAATTATTATCACCGC+AGG 0.572760 6.4:+6018140 None:intergenic
GTTGGGAAGCTGTGAAGGGA+AGG 0.574290 6.4:-6019445 MS.gene65540:CDS
GAGCTGAGATTATCAAATTG+TGG 0.575142 6.4:+6018648 None:intergenic
AAAGGGCCATGATAAACCCT+TGG 0.575607 6.4:-6012694 MS.gene65540:CDS
AGTGGCATGAGGAGCTTAGG+AGG 0.575652 6.4:-6019477 MS.gene65540:CDS
GGAAAAGATAAGCCGAGTGA+AGG 0.575823 6.4:-6011471 MS.gene65540:CDS
GACAGGTTCCTAGCTTCCAA+AGG 0.577216 6.4:+6011690 None:intergenic
GTTCAGGACGTTCCCTATGG+AGG 0.577250 6.4:-6012361 MS.gene65540:CDS
CAGTCATGCTATTATTCAAG+AGG 0.577634 6.4:-6012282 MS.gene65540:CDS
ATCGGCCGTCATTCTCTCGA+GGG 0.578662 6.4:-6019860 MS.gene65540:CDS
TCTGGCTATTGAGAAAGAAA+GGG 0.579078 6.4:-6012711 MS.gene65540:CDS
GCATTCAGACCAAATGCAGC+AGG 0.579481 6.4:+6010676 None:intergenic
GAAAGACCAACATAATAGGA+TGG 0.580315 6.4:-6019625 MS.gene65540:CDS
GGAGCATTGAAATCCGGAAG+TGG 0.581919 6.4:+6010775 None:intergenic
TACAAAATCAGCGAAGCTGA+AGG 0.582263 6.4:-6010884 MS.gene65540:CDS
CGATTGGACAGATGTGGAGA+AGG 0.586525 6.4:-6012027 MS.gene65540:CDS
GTGAAATGGAGCTCACCGAT+TGG 0.586902 6.4:-6012043 MS.gene65540:CDS
AATAATATTGGAGCTAGTAG+TGG 0.587415 6.4:-6017958 MS.gene65540:CDS
TCAGGACGTTCCCTATGGAG+GGG 0.588272 6.4:-6012359 MS.gene65540:CDS
ATTATCATAACCCCTCCATA+GGG 0.589215 6.4:+6012349 None:intergenic
CTTTCTTTCTCAATAGCCAG+AGG 0.589301 6.4:+6012713 None:intergenic
TGCACATGACTTTGAGACCC+AGG 0.589709 6.4:+6018747 None:intergenic
CAAGACAACAGCGGATTGTG+TGG 0.590203 6.4:-6012588 MS.gene65540:CDS
CCTAGGTTAAATTGGGGTGA+GGG 0.590217 6.4:-6019318 MS.gene65540:CDS
CCATCATGAGTTCTAGCCAT+GGG 0.592587 6.4:-6010822 MS.gene65540:CDS
TAACATCAACTTATTCATTG+TGG 0.593508 6.4:+6018599 None:intergenic
TGGATATTGATTCATTGACT+AGG 0.593611 6.4:-6018698 MS.gene65540:CDS
CGAGTTGATAGAGATGAAGC+TGG 0.594782 6.4:-6011309 MS.gene65540:CDS
TACCGAAAGATGATAGAGCA+TGG 0.594791 6.4:+6011994 None:intergenic
GTTTATGACAATGATTTCCA+GGG 0.595004 6.4:-6010862 MS.gene65540:CDS
AGTGGTTCATGCTCTCATGA+TGG 0.595691 6.4:-6017940 MS.gene65540:CDS
AGGCAAAAGGGTCAGGAAGT+CGG 0.596420 6.4:-6012153 MS.gene65540:CDS
CCCTCACCCCAATTTAACCT+AGG 0.596745 6.4:+6019318 None:intergenic
GGGGATGATGATGTGGATGG+TGG 0.597607 6.4:-6011840 MS.gene65540:CDS
TCAGGAAGTCGGTGAAAGCA+AGG 0.598095 6.4:-6012142 MS.gene65540:CDS
TTTGAGAGCAGCTTCAGTGA+CGG 0.598103 6.4:-6012414 MS.gene65540:CDS
AGTTCAGCTGATCCTGTGAA+AGG 0.598452 6.4:-6012173 MS.gene65540:CDS
CGCATTGGAATGGATCTCAT+GGG 0.600221 6.4:-6011891 MS.gene65540:CDS
AGGGGAAATAAGGAAAGTAG+AGG 0.600418 6.4:-6019822 MS.gene65540:CDS
AAATGGTTCAGAAAAGAAAG+AGG 0.601065 6.4:-6010620 MS.gene65540:CDS
GCAATGATTGCTCAGTGTGT+CGG 0.603166 6.4:-6011963 MS.gene65540:CDS
ATCACCGCAGGTAGAAACAT+TGG 0.604068 6.4:+6018152 None:intergenic
GGGGTTATGATAATAAGGCC+AGG 0.608580 6.4:-6012340 MS.gene65540:CDS
ATTTGTTGGGAAGCTGTGAA+GGG 0.609596 6.4:-6019449 MS.gene65540:CDS
TACGTCGGAATTTGGACGAG+AGG 0.609662 6.4:+6019674 None:intergenic
TCAATTCTCAGGTTTGTCAG+AGG 0.610881 6.4:-6011145 MS.gene65540:CDS
TCAGAAGATACAATTTGCAA+TGG 0.611399 6.4:+6018381 None:intergenic
GCTCACCGATTGGACAGATG+TGG 0.611434 6.4:-6012033 MS.gene65540:CDS
AGTTGGAGGAAGATAACTAT+CGG 0.611721 6.4:-6019878 MS.gene65540:CDS
TTCCGACGTAGTAAATACTT+GGG 0.612048 6.4:-6019661 MS.gene65540:CDS
CCCATCATGAGTTCTAGCCA+TGG 0.612513 6.4:-6010823 MS.gene65540:CDS
CAATGTGAAAATATTCGGGA+AGG 0.612907 6.4:-6010989 MS.gene65540:CDS
ATCAGCTGAACTAGTTATGG+AGG 0.613032 6.4:+6012184 None:intergenic
TGACATTTCAAAGTTACTAG+AGG 0.613288 6.4:-6018568 MS.gene65540:CDS
CTGGATTCCATATTAAAAGG+AGG 0.614285 6.4:+6019225 None:intergenic
CCATCCACATCATCATCCCC+CGG 0.614465 6.4:+6011843 None:intergenic
TGGGTGGTGACTGGCATCGG+AGG 0.615390 6.4:+6012104 None:intergenic
GGGGATGGAAAGTATGAAAG+GGG 0.615685 6.4:-6019840 MS.gene65540:CDS
CTCCCAAGTATTTACTACGT+CGG 0.616025 6.4:+6019659 None:intergenic
AAGATCCCAATTCCAGTGCA+GGG 0.616137 6.4:-6011937 MS.gene65540:CDS
ACAACGCTCAGAATATGTCC+AGG 0.617712 6.4:-6019752 MS.gene65540:CDS
TATCGGCCGTCATTCTCTCG+AGG 0.618153 6.4:-6019861 MS.gene65540:CDS
GATGGTTCTTCTGAGCTTCG+GGG 0.618764 6.4:-6011360 MS.gene65540:CDS
CGATTATGATGAGAAGGTGA+CGG 0.621399 6.4:+6020649 None:intergenic
AAAATGTGCAACCTTGTCAG+AGG 0.622233 6.4:+6018407 None:intergenic
GCTGCCAATGTTTCTACCTG+CGG 0.622494 6.4:-6018156 MS.gene65540:CDS
CCATCCCCTCGAGAGAATGA+CGG 0.624930 6.4:+6019855 None:intergenic
CAGAATTGGTGTCTGATATG+GGG 0.626814 6.4:-6011434 MS.gene65540:CDS
AAAACAAGTTGAGGTGCCTG+AGG 0.628937 6.4:-6019277 MS.gene65540:CDS
AAAAGATAAGCCGAGTGAAG+GGG 0.630313 6.4:-6011469 MS.gene65540:CDS
GAAGTGTCCATACCAGGGGA+AGG 0.630456 6.4:+6017700 None:intergenic
TCTGAACACATCTAACTACT+CGG 0.630828 6.4:+6010595 None:intergenic
ATCTTGTGACAAGAAGTTGG+AGG 0.631228 6.4:-6019892 MS.gene65540:CDS
AAGAAGCCTAGGTTAAATTG+GGG 0.631728 6.4:-6019324 MS.gene65540:CDS
TGGAGTTGTCGGATCACCGG+GGG 0.633048 6.4:-6011859 MS.gene65540:CDS
CCTTGACCACAAGACAACAG+CGG 0.635128 6.4:-6012597 MS.gene65540:CDS
TCTGAATTTGGCAAACACTG+CGG 0.635761 6.4:+6011021 None:intergenic
CATTTCACCACAGCTCTCGT+CGG 0.635931 6.4:+6012058 None:intergenic
AAAGATAAGCCGAGTGAAGG+GGG 0.635989 6.4:-6011468 MS.gene65540:CDS
CATTTATAGATGACGACATG+CGG 0.637601 6.4:-6010648 MS.gene65540:CDS
TTAGCCGTTCAAGTGGCATG+AGG 0.638398 6.4:-6019488 MS.gene65540:CDS
GCAGCAGAATTAGAGCAGCA+TGG 0.638462 6.4:+6011402 None:intergenic
GCATATCATCAACTGACTTG+CGG 0.640200 6.4:+6019706 None:intergenic
GCAGTCTCTAGACGTGACGT+GGG 0.644112 6.4:-6018261 MS.gene65540:CDS
ACTTGTTCCGACGAGAGCTG+TGG 0.645350 6.4:-6012065 MS.gene65540:CDS
GGTCTTCGATTATGATGAGA+AGG 0.649185 6.4:+6020643 None:intergenic
GTGGCATGAGGAGCTTAGGA+GGG 0.649607 6.4:-6019476 MS.gene65540:CDS
CATGGCTAGAACTCATGATG+GGG 0.650282 6.4:+6010824 None:intergenic
CTTGAACAAGATGCTTCCAA+GGG 0.650737 6.4:+6011216 None:intergenic
ACATGTTGGAGCCTCTGACA+AGG 0.651243 6.4:-6018418 MS.gene65540:CDS
TATTAAAAGGAGGTGAGACA+GGG 0.652365 6.4:+6019235 None:intergenic
AGTCTCGTGAAGATCCAGGT+CGG 0.656438 6.4:+6019517 None:intergenic
ATCGGCAGTGAATCTAAACT+GGG 0.658951 6.4:-6011588 MS.gene65540:CDS
TCGGCCGTCATTCTCTCGAG+GGG 0.672412 6.4:-6019859 MS.gene65540:CDS
AAAAGCCCAAAAGTTTCAGG+AGG 0.678993 6.4:-6019174 MS.gene65540:CDS
AACGTCCTCTCCATTCTCTG+TGG 0.679828 6.4:+6019790 None:intergenic
GCAGCATGCCTATAAGTACA+GGG 0.684044 6.4:+6018174 None:intergenic
GAGGTGTCTTCTCCACAACA+AGG 0.686703 6.4:+6018355 None:intergenic
CCAGACCGATTAAACTCATG+CGG 0.691491 6.4:+6020622 None:intergenic
ATGGCTAGAACTCATGATGG+GGG 0.691683 6.4:+6010825 None:intergenic
AGCCGAGTCAGATCAATCCG+AGG 0.697017 6.4:-6011667 MS.gene65540:CDS
CAGTCTCTAGACGTGACGTG+GGG 0.705768 6.4:-6018260 MS.gene65540:CDS
ACATTGGCTAGTATATGTGG+TGG 0.720828 6.4:-6012233 MS.gene65540:CDS
ATACCCGGTGAAGAGCTGCA+AGG 0.723162 6.4:+6019114 None:intergenic
ACTTGAATTAGGCTTCTGGG+TGG 0.729300 6.4:+6010948 None:intergenic
GCAGGAAGTGATGAGAAACG+AGG 0.730233 6.4:+6010724 None:intergenic
ACGCTCAGAATATGTCCAGG+AGG 0.731941 6.4:-6019749 MS.gene65540:CDS
TTTAGCCACAGAGAATGGAG+AGG 0.739761 6.4:-6019795 MS.gene65540:CDS
CTGGAGTTGTCGGATCACCG+GGG 0.743675 6.4:-6011860 MS.gene65540:CDS
GAGCTTCTATTCTAGCACTG+AGG 0.786972 6.4:-6018079 MS.gene65540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.4 gene 6010606 6020776 6010606 ID=MS.gene65540
chr6.4 mRNA 6010606 6020776 6010606 ID=MS.gene65540.t1;Parent=MS.gene65540
chr6.4 exon 6020602 6020776 6020602 ID=MS.gene65540.t1.exon1;Parent=MS.gene65540.t1
chr6.4 CDS 6020602 6020776 6020602 ID=cds.MS.gene65540.t1;Parent=MS.gene65540.t1
chr6.4 exon 6019118 6019975 6019118 ID=MS.gene65540.t1.exon2;Parent=MS.gene65540.t1
chr6.4 CDS 6019118 6019975 6019118 ID=cds.MS.gene65540.t1;Parent=MS.gene65540.t1
chr6.4 exon 6017713 6018846 6017713 ID=MS.gene65540.t1.exon3;Parent=MS.gene65540.t1
chr6.4 CDS 6017713 6018846 6017713 ID=cds.MS.gene65540.t1;Parent=MS.gene65540.t1
chr6.4 exon 6010606 6012911 6010606 ID=MS.gene65540.t1.exon4;Parent=MS.gene65540.t1
chr6.4 CDS 6010606 6012911 6010606 ID=cds.MS.gene65540.t1;Parent=MS.gene65540.t1
Gene Sequence

>MS.gene65540

ATGTCGCTGGAGCCGATACCCTTGGATCGAAAAAGCTCGTCGTTGAGAGAGAGGAAGCATGGGAGTTCGGAGTCTTTAGGATCAGTAGCAAGATGGAGAGGTTCACCGTCACCTTCTCATCATAATCGAAGACCGCATGAGTTTAATCGGTCTGGTGATTTTCGGAGACTGGCAGGTAATTATTTTGAATATGTTTTTGTGGTTTTAGTTGTAATTTATGATTTTGAGTTTTTAGATTTTGGAACTAATTAGTACTATATTGATATCCCTTTTGTTCTTAATGATTTGCTGTAATATGATCTTTTTGTAATTTATTATTTTTTGAACTTTTTGATTTCTTTGGTTTTAGAACAGATTAGAGTATTGATTCCTCTTTCGCTATTAATGTCTTAAAGATTAGTTGTAATCTAATTTTGGTTGGTTTTTAAATTTGTCAAGTTCTTTGTTTGGAACAATTAGGGTTTTGATTACTCTTTTGCTGTCATTGTCTTAAGGAATGACTGTAATTTGATTTTTGTTTGTAAGTTATGATTTTTGAACTTGTCAATTTTTATTTATTTATTTATTTATATATTTTGGAACTAGTTAGTGTTTTCATTGCCCTGTTTATGTTAATGTCTTATTAATTATCTAATAATCTAATTTTGGTTTGTAATTGATGATTTTTTTAACTTATTGATTTATTTTCTTCCCCTTAGCTTTATTAATTTTTTTTATGAGAATTGAGAAATGTAGTTTATCTGTATTAATTTTCTTATTCTTGTTTGTAATTCCAATTTTTGGTTTGAATGTTTTCTGAAGGTCATCGTAGGATGGGTAGTTGGCAGCAATTTCCAGTAGAACGTGAGCACATGTTTTCTCGATCTTGTGACAAGAAGTTGGAGGAAGATAACTATCGGCCGTCATTCTCTCGAGGGGATGGAAAGTATGAAAGGGGAAATAAGGAAAGTAGAGGAACCTTTAGCCACAGAGAATGGAGAGGACGTTCATCGGAAAATGTGAACAACGCTCAGAATATGTCCAGGAGGCAAACTGGTGCAAGTAATGACCGCAAGTCAGTTGATGATATGCTAACATATTCCTCTCGTCCAAATTCCGACGTAGTAAATACTTGGGAGCAACATCAAATGAAAGACCAACATAATAGGATGGATAGTGTTAATCGGTTTGGTACAGGTCAAAGATGTGATAGGGATAGTTCTCTGGGTACAGTTGACTGGAAGCCACTTAAATGGACCCGACCTGGATCTTCACGAGACTCTGGTTTTAGCCGTTCAAGTGGCATGAGGAGCTTAGGAGGGACAAATTTGTTGGGAAGCTGTGAAGGGAAGGATGGGTTGCAACAAAAATTTGTAACTGCTGATGAGTCATATTCAAGGGAAGCTGCTACATTTCGTACTTCTTCTGCTCCATTTGAAGAGACAAATTCTAAGAAGCCTAGGTTAAATTGGGGTGAGGGACTTGCAAAGTTTGAAAAAAAACAAGTTGAGGTGCCTGAGGTAACTTTAAACAAAGATGACCCTGTCTCACCTCCTTTTAATATGGAATCCAGTAATTTCCTCAATCCTGGCTTAGTAGATAAAAGCCCAAAAGTTTCAGGAGGCGCAGGTTGTGCATCTTCTACAACTCCATCTTCTACACCTTGCAGCTCTTCACCGGGTATTTTGGCTTTCTTGTTACTGTTTATAATTTTATAATCTTTTAATTCCTTGTGTGAATACGGTACCAGATCAAAGCAACTTGATTGGTATAAGTGTTTACTATTGTTTGTGAAGTAACTAACATCTCTGACCCACCTCAGTGTATATCTTAGATTGTGTGTGTGTTCAGATTTGTATTAAATGAATAAATAATACTATCTGCGTGTTTGAATGTGTATGTTATTTTCCCTACTATGCATGGTTTATCTAAACTGAGTTTCACTTTGTAGCAGGTGCAGATGATAAATTGTTTGGAAAAGCTGCAAATTTGGACTGCGATGTTGAAAATTCGGGTCGTTCACCTGGTCCTGGGTCTCAAAGTCATGTGCAGATGTTTTCATTCAATTTAGAGAAGGTGGATATTGATTCATTGACTAGGTTGGGCTCTTCTCTTGCTGAGTTATTACCACAATTTGATAATCTCAGCTCTGTCGATTGTAGTGTATTAAGTTCCACCACAATGAATAAGTTGATGTTATTGAAGGCTGACATTTCAAAGTTACTAGAGGTGACCGAAACTGAAATTGATTCACTTGAAACTGAACTTAGATCTCTAAAATCTAAATCTGAGGGTAGATTTTCATGTTCGACAGCGGTTGGCTCTCTGGTATGTTGCAATTTAAAATCTTGTGATAAACATGTTGGAGCCTCTGACAAGGTTGCACATTTTGAGCCATTGCAAATTGTATCTTCTGATGACCTTGTTGTGGAGAAGACACCTCTTTCTTCTAACTTGCTTGACAATCCTGGACCTACAAGATCTAAATTTGTAGAGCATCTTCCTATGATTAATGCAGTCTCTAGACGTGACGTGGGGAGATATGGTAATTGCTTTGAAGACTTGGATGAAATTCAATCTACATCTGTACAATGCTTAATTCCCTGTACTTATAGGCATGCTGCCAATGTTTCTACCTGCGGTGATAATAATTCATCTTTGGAGGTTAAAAATGGTGTGGATGCTAAGTCTAGTGCGAGCTTCTATTCTAGCACTGAGGATAATTTATATGATAAAATTATTTCTTGCAATAAAAAAATTGCAAAAGAAGCATCTGAAGTATTTGTTAAGTTATTGCCTGAAAAATGTCTCAAGAACAATAATATTGGAGCTAGTAGTGGTTCATGCTCTCATGATGGCACATTCATTATGGAAGGATTTGCAAAGAGAAGACGATCAGCAAGATTGAAGGAGAGAGTTGTAACACTTAAGTTTAAAGCATTGCAACACTTGTGGAAAGAAGACACAAGCTTACTGTCTACTAGGAAACACCGCCCAAAATCTCACAAGAAACTTGAATCAGATCTACGCACCACCAATAATAGTCATCAGAAGAAGAGGTCTTCTTTTCGTTTTCCTTCCCCTGGTATGGACACTTCTTAATAATTGTCACATTTACATTGATTTTGCTATGTTTTTTATTACATGGATTTGTTGTTGTTATGGACAGAACTTAATGCCATTATTTAATTCATGTAACCCATCATAGTTATTGGGAAACAACTTCAATTGTCACTGTTGCTATTTTATTTAATCATATATTCAGACAATTACGACATTATGCTTTACCTTGGTTTCATAAGGCTTTTGGTGCTTTGTATGGCTTGATTGTTAATTCTTTGATGATGGTGATATGTTTTGGCGCTTCATATCTGTATACTCTGTGTGGTGCTATTAACCTTCTGGTGACATCAACAAGACATATTTAGGACTGTGTAGAATAACAATCTAATATATTTCATTTTTAGTTTGCTTAATTTTGTATTAGGTGTCAACCTTGCTAAGTAACTGACATGCTTGTAAATTATTAGGTCATCATATCAAAACCATGTAATGAATGAAATCCTAGGTCTTGCAGCATTGCACTGATGTTTATGTCTATTAGGCAGTAGTTTTAGAATTTACCTGTTTAATATGGACAAGAACAATTGAAATAATGGCTTGATAATAATTAGTGTTAATAAAGTTAATAAAGTAGTTTGTTGATGTAAAGTTGTGTGTACTTTACTCCCTAAGCCAGAGAACGTAATTTTCCAGAACCCTTTTGAAAGTTTTTCGTGTTAATACTTAATTTAGAATCTTGGAGAATCAATAATTAGCTCCTTTGAGTTACTATAAGATAAAAATGTTTTTTAACGTCCCATTTTGTGAACTACATGGATTTATCGCTCATTAATTTCACACATCCTTTTCATCAACAAAATTTATTCTTTTATGAGATATGTGAGAGACCGGTAAAATAAAGAAAAGAAGACGGCGCAGCTTATGCGAGTGTGTACTGTTTCTCTAGTGCTCTACCCTTGTTTGTACTAATTGAAAAGACCCGCATCCCACATCGAATAGAGAAATGACCTCTAAAGAGGTTATTATAAAGAGAGACAACCTTCACCTCACAAGCCTGTTTTATAAGAATGCGTTAGACCCAATATAAAACCTAGCATAGTATCGAATTCTATCTTGGGCCGCCTACCAATTATATCACATAACAAACACAATAGTGTTAGGCATGGGGTTGTGTTGTTAATAACGGCGCAATTGCGGTGCGGAAAGGACCTATGGTGTGATGCTTTTTACTAGATATATGCGTTCAACGGTTGTGGTGTTTGCAGCCATGAATTGCGGAAAAATCACAGCCGAATAGCCCTTTCTCAGCCGCATCTTCATTAGGGAGGCCATAATCTTCCATTTTCACTTTCCTGGCCACAATCATCCGTTTTCCAGCTATTAGCCTCACATGTCGAGAAGAAATAAAAAAGACACATGAAAGGAAAAAAAAGAAGATATAGGAAGAGAGAAAGGCTGATGACTAAAAGATGCAGTGCGCGGCAGAAACAATTGGGTGGCAGCAGAGAAGAGGCTGCATACCTTTTGGAGAAGATGAGTTTTGCTTTAGGGTTTAGCGAGTGGACATCTCAGTTTTAGGGTTCGTTTCACATAATGGGTCTACAATAAACCAAACAATGGGCCGTATGTTTCCTAATATCTAAAAATATTCCCATGGGGGTATAAAAGTGTAAAAACGTAGGTAGCCAATCCCAGATAGCGGCTCGAAGAGGCTGACCCCGAAAGTGGGATATCGGGATGACCACTATGATAATTTTTTGGACAAATTGCATGAATAAGACTATAAATATAGATTCAATGTAAAATTAAACAAATTACTGAACTTACGAAACATTTATAAATAGAAATAAAAATTCACGAGTCTTGGTCAAAACATACATTAAATACCAACAAAACTTAAATGAATGTTCTAGCATGGGAATAGAAAAAGAGGAAACAGAAGAAGAAATAGAACAAATGGAGGGAATGAAACAATATCATAACAGAGTACAAACAACAAAGTAAAGAAAAAAATGACAGGAGGAAACAGTAGATGGTGGGCTGCGCGGCGGCTGGTTAGCAGAGCTGGCTTGCAGATTATGGAAGAGAAGTCTGGAAAATATGATGTTCTTGCACCGAAAGAGTTCACAGGAAAAGGAAGATAAGAAAAGGAGTTCTCATGTCTAAAAAAATTAATAGTACTCTGGGGTTTTCTTAACAAAATCACTTCCGCATTTCAAAAGCACAACGCACTCAGCGTTCCGGTGACCTGCAGACACAAAACAGCCGCGACCTTAATAGGCGCTGCACCAGACCCTATCGCTGCAGCCAGTCAGTGCGCTGCCATGCTCCGGCGTGATTGCGCTGTGAACTGCTGCTATTGACGGTGAAAACCCAATGATATATGGGCCAACCAATTGGACAGACATTTCCCGACTAAAACAGTGTAGACAAAACTGTCAATTAAATCAGAGACAAAAATACTTTCAAAATACTAACATATCTAATCTAATAAATATAAAACTGAAATGGGAAAAAAATAATTCTGTACATATACAGTAAAGATGACTTAGAATATAGCATTTAGTAGTAATTATTAATGAATATAAAAAAATATCAGAATAGCAGCTTTCCCGCTTTCCGACTAACGGCTATCCCCAGTTTTAGCGTCGGCTAATCCGTGCCGCTATACAAGATTAACACATAGAAACTGTTTTGTTCAGTTTCTCTTCATTCGGGCTTTGCTCTTATTACTGTGTTCTATCTCAGTGTGTATCCAAGCTCGTGTTGCTGCGACTTCTGCACTATGTTCAGCTATTTCTCGTTTGTGGTTCACATTTCTTCTCCTGTTTTTGGTCTTCCTTGTTGCGGTTCATGTGCCCTTAGCCTATATGTACAGTGCCACGGGTGCCATCTTACTGGTCATACCCTCTTGGGATCCTGAATTCTAGATTCACAAAAACATCTCACAACATTAAGCTCGGTAATGATTTTAAAGGGAAATTAATTTAAATTAACAAGGTATGAGTGGTGGTGTTAAGAAGATGGTGATGATTTTTTCCTTAATATCATTCTGTTGTGGTTGTGTGGACAACTAAAGTGATGAATCATACATTTAGATGACATAACAGATTTGAATGAGTTAGAAAAACATTCCTTACATTATTACTCAAAATGAATTACGAGATCAAACTTGGTAGAAAATTCAATGTAAAAATTCTTAAATATTTCAAACAATTATGATCGATTTTTCATTAAATAGAGTTAAGTGCATCTTGAAAAGTCATCAATGAAGATTATTATGAAATAACAAAATCCTAGAATTGAACTGATACGACTAGGACTCAAATTGTAGTTAACAGAACATATTATAGTGAACGGAACAAATTATGATGGTTACCTGAAAAGTTGCGGGAGAATTCTGATGGTGGCAGAGGAAGTTCCTGAACTTCTGATGTTGATCCCTTTTCCGTTTTCTATGCTATCCGACATAACCATAGCTTGGTCCCGGAGAGAACCAGACCTATCAGAACTGTACAAGACACCTACATTACCATCTGTGCCCAGTTTAAACTCACCACCAATCACAGATGCATTAGAAACCATATTTACATCTTCATGATCTACTTTCCCATTAATTTCCTCTGATTCATCTAAGTCAGCTGTTGATTACTGGTTTCCATAGGAATAGGTTCATCATGATACACGTTCTTGTCAGATGTTAGCTGGCCCACACCTGTTTTAGTTCCTGATGTATCAGAGTCATTTACTGAACCTGTCTCTGCAATGCATGCATTATCTGCATCTCTCCTGCCACTATCCACATCATCATCCCCCGGTAATCCAACAATTTCAGCTCTTTGACCAATGATATCCATTCCAATGCATTTGCAAGTCTCGCTAAAAAATACTCTGCACTGGTATTGGGATCTTGTTCTGACATACTGTGCAATTATTGCAAAATCCTTACCGTGAGATGATAAAGCATGAAGGAATGCTGCCTTCTCCACATCTGTCCAATCAGTAAGCTCCACTTCACCACTGCTCTCGCCGGAACAAGTTTCTTGGTCAATATCCTGAGTAATGACCGGCATCAGAGGTTGTTTGCATATAGATCTCACTTTCACAGACTTCCCGACCCTTTTACCTCTAACATGAACAGCTGAACTAGTTATGCTGGAACTTGCTGCCTTGGACAAAAGACAACCACCGCATATACTAGTCAATACACCAGCTGCAACAGTCGCTTTTTCATCTCGAATAATGTCAAAACTGTTTGGCTTCTATGTAATGATGCTGACCCCCTTTGACATGGCCTTATTATCATATCCCCTCCATAGGGCACGTCCTGAACACATTTTCCGATTACATGCAATGTCATATGCCATCACTGAGCTGCACTCAAAATATCAAGTGAAGAAGTGTTCGCTACAGAATTCCATTTTATACCCGACACCATCAAGTCAGTTTTTGCTTTCAAAAACTTCCCTAGCTTGTTATCTTTTTTCTTAATTTTCTCAAAACAATCAAACTTACGATTTTTGTAGTAGAATTCAACACAGTCCACTGTTGTCTTGTGGTCAAGGAAAGTAGAATATTTATAGAACTACAGTGCTACTATAACTGCTATTTAATAACTTCATTTTAGGAGGAACATTAATTCTAAATCTAGGTTTCACAGTAGCTATGTCCTAATTTAGGTTTGTTTTGTGCTGCTCTTTGCTGGGTTCTGCTATTGACTACTTGTTTATTTGATGAATTGAGACATTTACATTTCATAGCAGCTATGTTCTAATTTAGGTTTGTTTTGTGCTGATAAATGTACTCTTTTGTCTATTTTGCAGCTGCAAACAAACTAAGATTGGTTCCAACATCTGAGATGATCAATTATACAAGCCAACTACTCTCAGAATCCAAACATGACATTCTCAGAAGCACCTTGAAGATGCCAGCATTAATTTTGGATCAAAAAGAAAAAATGAATTCAATGTTTTTATCTAGTAATGGGCTGGTTGAAGATCCTCTGGCTATTGAGAAAGAAAGGGCCATGATAAACCCTTGGACTTTAGAAGAGAGAGAGGTTTTCTTGGAGAAATTTGCTGCCATTGGTAAAGATTTTCGAAAAATTTCTACTTTCCTTGACCACAAGACAACAGCGGATTGTGTGGAGTTCTACTACAAAAATCACAAGTCTGTTTGTTTTGAGAAAATCATGAAAAAGGACGACGACAAGCTAGGGAAGTTTTTTAACGCGAAAACTGACCTGATACCGTCAAGTATGAAATGGAATTCTGAAGCGAACACTTCTTCGCTTGAAGTTTTGAGAGCAGCTTCAGTGACGGCAGATGGCATTGCGCTTAATCGGAAAATGCGTTCAGGACGTTCCCTATGGAGGGGTTATGATAATAAGGCCAGGTCAAAGGGAGACAAAATCATTGCAGAGAAGCCAAACAGTCATGCTATTATTCAAGAGGATAGAGAGACTAATGCAGCTGCTGATACATTGGCTAGTATATGTGGTGGTTTTCATTTACCTGAGGCAGCGAGTTCCTCCATAACTAGTTCAGCTGATCCTGTGAAAGGCAAAAGGGTCAGGAAGTCGGTGAAAGCAAGGTCTATTTGCAAACAACCTCCGATGCCAGTCACCACCCAAGATATGGACCAAGAAACTTGTTCCGACGAGAGCTGTGGTGAAATGGAGCTCACCGATTGGACAGATGTGGAGAAGGCAGCATTTCTCCATGCTCTATCATCTTTCGGTAAGGATTTTGCAATGATTGCTCAGTGTGTCGGAACAAGATCCCAATTCCAGTGCAGGGCATTTTTTTGCAAGACTCACAAACGCATTGGAATGGATCTCATGGGTGAAAGAGCTGGAGTTGTCGGATCACCGGGGGATGATGATGTGGATGGTGGCAGGAGCGATGCAGATAATGCATGCATTCCAGAGACAGGTTCAGCCAATGGCTCTGATACGTCAGGCTCTAAAACAGTTGTTGACCAGCCTGCATCTGATAAGAAGCTGTATCAGGAAGAATCTAATCCTTTGGAAGCTAGGAACCTGTCAGCCGAGTCAGATCAATCCGAGGAAATTAACGGAAAAGCCGATCACGAAAAAGTAAATATTTTTTCTAATGCATCTGTGATCGGCAGTGAATCTAAACTGGGCACTGATGGTAATGCAGCTGTCTTGTGCAGTTTTGATGGGCCTGGTACTGTCCAGCACCAGAGTGCTATAGTTATTTCGGATAGCACAGAAATTGGAAAAGATAAGCCGAGTGAAGGGGGAGGTGCTGTTACAGAATTGGTGTCTGATATGGGGACAATTGAACCATGCTGCTCTAATTCTGCTGCTGAGGGTAGACTGGTTTCTGATGGTTCTTCTGAGCTTCGGGGACATGAATTGGAGGCTTTAACTGTATGTCGAGTTGATAGAGATGAAGCTGGTACAGATGTTGTAATTGAATTGGAAGACAACGTCCAAGATTCAAGAACTTCGATGAATACTTCACTATCACCCTTGGAAGCATCTTGTTCAAGATTGAGTGCTGATGCTGAAAATGAGCCAGAACTATGCCTTGAAAAACCTCAATTCTCAGGTTTGTCAGAGGGTCCTGTCACAAGATTCAGTGTGAATATGAGCTGCAACAGTTCAGCAACTGAGTTGCCGCTTTTGTCACAAAAGGTTGAACAACATGATCATCACAAAAGCCCGCAGTGTTTGCCAAATTCAGAAGATACACCCAATGTGAAAATATTCGGGAAGGTACTAACCATTCCTTCATCCACCCAGAAGCCTAATTCAAGTGCCAAGAGAAATGAAGAAAATGGTACCCATGATAATGCTGGTACAAAATCAGCGAAGCTGAAGGTTTATGACAATGATTTCCAGGGCATTGATTTCAATGCCCCCATCATGAGTTCTAGCCATGGGAGCACAGTACAGCCTGCATTCTCACCACTTCCGGATTTCAATGCTCCCTATACGGGTGATGGGAACACAATACAGCCTCGTTTCTCATCACTTCCTGCTTCTTCCATATTGCTCGCGAAGTATCCTGCTGCATTTGGTCTGAATGCGCAGCCATTTATAGATGACGACATGCGGAGAGCAAATGGTTCAGAAAAGAAAGAGGATCCGAGTAGTTAG
Protein sequence

>MS.gene65540.t1

MSLEPIPLDRKSSSLRERKHGSSESLGSVARWRGSPSPSHHNRRPHEFNRSGDFRRLAGHRRMGSWQQFPVEREHMFSRSCDKKLEEDNYRPSFSRGDGKYERGNKESRGTFSHREWRGRSSENVNNAQNMSRRQTGASNDRKSVDDMLTYSSRPNSDVVNTWEQHQMKDQHNRMDSVNRFGTGQRCDRDSSLGTVDWKPLKWTRPGSSRDSGFSRSSGMRSLGGTNLLGSCEGKDGLQQKFVTADESYSREAATFRTSSAPFEETNSKKPRLNWGEGLAKFEKKQVEVPEVTLNKDDPVSPPFNMESSNFLNPGLVDKSPKVSGGAGCASSTTPSSTPCSSSPAGADDKLFGKAANLDCDVENSGRSPGPGSQSHVQMFSFNLEKVDIDSLTRLGSSLAELLPQFDNLSSVDCSVLSSTTMNKLMLLKADISKLLEVTETEIDSLETELRSLKSKSEGRFSCSTAVGSLVCCNLKSCDKHVGASDKVAHFEPLQIVSSDDLVVEKTPLSSNLLDNPGPTRSKFVEHLPMINAVSRRDVGRYGNCFEDLDEIQSTSVQCLIPCTYRHAANVSTCGDNNSSLEVKNGVDAKSSASFYSSTEDNLYDKIISCNKKIAKEASEVFVKLLPEKCLKNNNIGASSGSCSHDGTFIMEGFAKRRRSARLKERVVTLKFKALQHLWKEDTSLLSTRKHRPKSHKKLESDLRTTNNSHQKKRSSFRFPSPAANKLRLVPTSEMINYTSQLLSESKHDILRSTLKMPALILDQKEKMNSMFLSSNGLVEDPLAIEKERAMINPWTLEEREVFLEKFAAIGKDFRKISTFLDHKTTADCVEFYYKNHKSVCFEKIMKKDDDKLGKFFNAKTDLIPSSMKWNSEANTSSLEVLRAASVTADGIALNRKMRSGRSLWRGYDNKARSKGDKIIAEKPNSHAIIQEDRETNAAADTLASICGGFHLPEAASSSITSSADPVKGKRVRKSVKARSICKQPPMPVTTQDMDQETCSDESCGEMELTDWTDVEKAAFLHALSSFGKDFAMIAQCVGTRSQFQCRAFFCKTHKRIGMDLMGERAGVVGSPGDDDVDGGRSDADNACIPETGSANGSDTSGSKTVVDQPASDKKLYQEESNPLEARNLSAESDQSEEINGKADHEKVNIFSNASVIGSESKLGTDGNAAVLCSFDGPGTVQHQSAIVISDSTEIGKDKPSEGGGAVTELVSDMGTIEPCCSNSAAEGRLVSDGSSELRGHELEALTVCRVDRDEAGTDVVIELEDNVQDSRTSMNTSLSPLEASCSRLSADAENEPELCLEKPQFSGLSEGPVTRFSVNMSCNSSATELPLLSQKVEQHDHHKSPQCLPNSEDTPNVKIFGKVLTIPSSTQKPNSSAKRNEENGTHDNAGTKSAKLKVYDNDFQGIDFNAPIMSSSHGSTVQPAFSPLPDFNAPYTGDGNTIQPRFSSLPASSILLAKYPAAFGLNAQPFIDDDMRRANGSEKKEDPSS