AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene65988

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65988.t1 MTR_8g067280 96.148 649 24 1 1 649 1 648 0.0 1197
MS.gene65988.t1 MTR_5g030430 59.885 698 205 19 3 647 2 677 0.0 712
MS.gene65988.t1 MTR_5g030420 61.905 210 73 4 34 238 5 212 1.16e-84 265
MS.gene65988.t1 MTR_5g030420 61.905 210 73 4 34 238 5 212 1.49e-84 266
MS.gene65988.t1 MTR_8g024790 47.264 201 95 3 445 644 273 463 3.33e-52 187
MS.gene65988.t1 MTR_8g024790 30.244 205 106 5 43 243 19 190 3.94e-24 106
MS.gene65988.t1 MTR_8g024770 49.223 193 90 3 445 636 261 446 3.16e-51 184
MS.gene65988.t1 MTR_8g024770 28.177 181 87 5 67 243 36 177 7.20e-18 87.0
MS.gene65988.t1 MTR_8g027495 44.444 189 85 5 453 640 448 617 6.24e-37 146
MS.gene65988.t1 MTR_8g027495 34.694 196 110 8 52 234 51 241 2.49e-21 99.0
MS.gene65988.t1 MTR_7g096350 39.035 228 86 5 414 623 288 480 2.83e-36 143
MS.gene65988.t1 MTR_7g096350 29.348 184 122 6 53 234 49 226 9.43e-15 77.8
MS.gene65988.t1 MTR_7g117670 38.503 187 95 3 455 640 394 561 8.09e-34 137
MS.gene65988.t1 MTR_7g117670 29.439 214 114 9 52 239 48 250 6.03e-15 78.6
MS.gene65988.t1 MTR_4g067010 35.329 167 84 4 444 610 138 280 4.49e-20 92.4
MS.gene65988.t1 MTR_1g072320 32.716 162 94 2 463 618 470 622 8.69e-20 94.4
MS.gene65988.t1 MTR_1g072320 31.579 190 109 6 54 234 11 188 1.02e-19 94.0
MS.gene65988.t1 MTR_0250s0040 36.943 157 86 3 463 618 88 232 1.13e-19 89.7
MS.gene65988.t1 MTR_5g014640 37.576 165 70 6 452 609 147 285 1.47e-19 90.9
MS.gene65988.t1 MTR_0194s0050 30.159 252 136 12 423 641 139 383 2.43e-19 90.9
MS.gene65988.t1 MTR_0246s0020 32.212 208 116 6 449 645 190 383 6.20e-19 89.7
MS.gene65988.t1 MTR_2g104490 28.182 220 123 4 397 610 81 271 6.46e-19 88.6
MS.gene65988.t1 MTR_2g104490 29.412 221 119 6 397 610 81 271 7.52e-19 88.2
MS.gene65988.t1 MTR_4g009540 29.870 231 135 6 382 610 89 294 1.47e-18 87.4
MS.gene65988.t1 MTR_4g009110 28.205 234 139 4 382 610 104 313 1.94e-18 87.8
MS.gene65988.t1 MTR_4g009540 29.870 231 135 6 382 610 89 294 2.87e-18 87.0
MS.gene65988.t1 MTR_0246s0020 34.146 164 92 4 449 610 190 339 4.97e-18 86.7
MS.gene65988.t1 MTR_4g057270 33.951 162 92 6 467 625 153 302 5.71e-18 86.3
MS.gene65988.t1 MTR_3g030700 33.133 166 105 2 451 616 184 343 7.53e-18 86.3
MS.gene65988.t1 MTR_0011s0260 36.424 151 79 3 463 610 183 319 1.02e-17 85.9
MS.gene65988.t1 MTR_0011s0210 35.333 150 82 4 463 610 183 319 1.74e-17 85.1
MS.gene65988.t1 MTR_2g010450 32.000 175 108 3 435 609 150 313 3.33e-17 84.0
MS.gene65988.t1 MTR_4g092700 34.868 152 82 3 461 609 156 293 6.25e-17 82.8
MS.gene65988.t1 MTR_4g066460 31.361 169 86 3 445 610 147 288 1.17e-16 82.0
MS.gene65988.t1 MTR_6g047570 36.184 152 78 4 463 610 159 295 1.92e-16 81.6
MS.gene65988.t1 MTR_2g104550 27.907 215 133 5 397 610 82 275 2.08e-16 81.3
MS.gene65988.t1 MTR_3g498695 35.256 156 96 3 461 614 296 448 5.80e-16 81.6
MS.gene65988.t1 MTR_3g498695 35.256 156 96 3 461 614 296 448 5.82e-16 81.6
MS.gene65988.t1 MTR_5g014520 31.515 165 100 3 446 610 142 293 9.18e-16 79.3
MS.gene65988.t1 MTR_4g066380 29.412 204 103 4 410 610 120 285 1.14e-15 79.0
MS.gene65988.t1 MTR_4g097950 33.333 177 77 4 439 586 25 189 1.18e-15 77.8
MS.gene65988.t1 MTR_3g104100 31.333 150 102 1 467 616 199 347 1.23e-15 79.7
MS.gene65988.t1 MTR_5g014560 29.167 192 123 4 424 615 94 272 5.16e-15 76.6
MS.gene65988.t1 MTR_2g084280 30.247 162 94 5 467 625 137 282 5.75e-15 76.6
MS.gene65988.t1 MTR_2g038040 33.540 161 83 4 464 611 53 202 5.88e-15 75.5
MS.gene65988.t1 MTR_8g064700 32.278 158 94 4 468 619 249 399 9.90e-15 77.0
MS.gene65988.t1 MTR_8g009020 30.058 173 101 4 447 610 125 286 1.01e-14 76.3
MS.gene65988.t1 MTR_1g112680 30.909 165 91 6 467 611 321 482 2.87e-14 76.3
MS.gene65988.t1 MTR_8g098275 27.826 230 140 9 69 283 19 237 3.35e-14 76.3
MS.gene65988.t1 MTR_8g098275 28.221 163 102 2 459 606 397 559 4.66e-12 69.3
MS.gene65988.t1 MTR_2g081040 30.769 182 119 4 467 644 181 359 6.18e-14 74.3
MS.gene65988.t1 MTR_5g014600 27.429 175 109 3 445 609 131 297 9.34e-14 73.6
MS.gene65988.t1 MTR_4g097940 31.677 161 91 5 451 610 147 289 1.48e-13 72.8
MS.gene65988.t1 MTR_7g083900 32.716 162 102 3 461 618 284 442 3.48e-13 72.8
MS.gene65988.t1 MTR_7g083900 32.716 162 102 3 461 618 284 442 3.53e-13 72.8
MS.gene65988.t1 MTR_0246s0050 31.469 143 80 3 463 605 151 275 1.01e-12 70.1
MS.gene65988.t1 MTR_6g047550 57.407 54 23 0 463 516 173 226 1.06e-12 69.3
MS.gene65988.t1 MTR_4g098035 31.469 143 80 3 463 605 172 296 1.21e-12 70.1
MS.gene65988.t1 MTR_5g064950 26.147 218 137 8 436 635 70 281 2.30e-12 68.6
MS.gene65988.t1 MTR_8g098275 28.221 163 102 2 459 606 304 466 4.94e-12 69.3
MS.gene65988.t1 MTR_8g098275 28.221 163 102 2 459 606 240 402 6.17e-12 68.6
MS.gene65988.t1 MTR_4g097920 29.480 173 102 6 440 610 130 284 7.92e-12 67.4
MS.gene65988.t1 MTR_4g097920 29.480 173 102 6 440 610 115 269 8.20e-12 67.4
MS.gene65988.t1 MTR_8g066770 28.249 177 112 4 462 629 114 284 2.21e-11 65.9
MS.gene65988.t1 MTR_5g064950 25.510 196 124 7 436 615 70 259 2.28e-11 65.9
MS.gene65988.t1 MTR_2g104560 27.891 147 93 4 464 610 55 188 2.50e-11 64.3
MS.gene65988.t1 MTR_8g069740 27.160 162 103 5 452 610 102 251 2.64e-11 65.1
MS.gene65988.t1 MTR_2g022280 25.946 185 115 5 462 633 1 176 3.66e-11 63.2
MS.gene65988.t1 MTR_4g094762 29.240 171 114 3 464 630 293 460 4.51e-11 66.2
MS.gene65988.t1 MTR_1g028470 23.894 226 139 6 430 626 53 274 7.93e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65988.t1 AT1G32640 50.898 668 247 19 3 644 11 623 0.0 575
MS.gene65988.t1 AT4G17880 47.344 659 240 18 3 646 22 588 0.0 532
MS.gene65988.t1 AT5G46760 47.239 652 255 16 6 645 16 590 8.62e-169 495
MS.gene65988.t1 AT5G46830 56.545 191 68 4 454 643 334 510 1.19e-55 197
MS.gene65988.t1 AT5G46830 32.225 391 166 10 6 377 5 315 8.31e-43 162
MS.gene65988.t1 AT1G01260 38.202 267 112 6 374 640 362 575 2.68e-40 156
MS.gene65988.t1 AT1G01260 38.144 194 106 8 52 234 46 236 2.78e-25 111
MS.gene65988.t1 AT1G01260 38.202 267 112 6 374 640 362 575 2.68e-40 156
MS.gene65988.t1 AT1G01260 38.144 194 106 8 52 234 46 236 2.78e-25 111
MS.gene65988.t1 AT1G01260 38.202 267 112 6 374 640 362 575 2.68e-40 156
MS.gene65988.t1 AT1G01260 38.144 194 106 8 52 234 46 236 2.78e-25 111
MS.gene65988.t1 AT2G46510 42.051 195 82 3 445 637 377 542 2.45e-39 153
MS.gene65988.t1 AT2G46510 33.493 209 118 9 44 234 34 239 5.37e-21 97.8
MS.gene65988.t1 AT4G16430 39.205 176 71 3 445 619 302 442 1.53e-33 134
MS.gene65988.t1 AT4G16430 27.679 224 136 6 19 234 21 226 1.44e-16 83.2
MS.gene65988.t1 AT4G00870 46.000 150 73 2 462 611 248 389 8.22e-31 125
MS.gene65988.t1 AT4G00870 28.283 198 111 5 53 245 34 205 1.01e-16 83.6
MS.gene65988.t1 AT4G09820 34.343 198 114 7 58 245 20 211 6.82e-22 100
MS.gene65988.t1 AT4G09820 32.051 156 74 3 460 615 360 483 3.02e-16 82.4
MS.gene65988.t1 AT4G37850 35.912 181 92 6 441 610 123 290 1.06e-20 94.4
MS.gene65988.t1 AT4G37850 35.912 181 92 6 441 610 123 290 1.06e-20 94.4
MS.gene65988.t1 AT5G57150 33.333 180 112 5 464 640 56 230 1.07e-20 92.8
MS.gene65988.t1 AT5G57150 39.310 145 80 5 464 605 55 194 1.89e-20 90.9
MS.gene65988.t1 AT5G57150 39.310 145 80 5 464 605 56 195 2.00e-20 90.9
MS.gene65988.t1 AT5G57150 39.310 145 80 5 464 605 56 195 2.08e-20 90.9
MS.gene65988.t1 AT5G57150 37.931 145 82 4 464 605 55 194 3.82e-20 90.9
MS.gene65988.t1 AT1G63650 33.516 182 100 6 69 234 26 202 9.58e-18 87.8
MS.gene65988.t1 AT1G63650 27.374 179 99 4 459 618 401 567 2.59e-14 76.6
MS.gene65988.t1 AT1G63650 33.516 182 100 6 69 234 26 202 9.58e-18 87.8
MS.gene65988.t1 AT1G63650 27.374 179 99 4 459 618 401 567 2.59e-14 76.6
MS.gene65988.t1 AT1G63650 33.516 182 100 6 69 234 26 202 9.58e-18 87.8
MS.gene65988.t1 AT1G63650 27.374 179 99 4 459 618 401 567 2.59e-14 76.6
MS.gene65988.t1 AT3G26744 32.850 207 124 6 420 618 262 461 1.22e-17 86.7
MS.gene65988.t1 AT3G26744 32.850 207 124 6 420 618 262 461 1.39e-17 86.7
MS.gene65988.t1 AT3G26744 32.850 207 124 6 420 618 262 461 1.39e-17 86.7
MS.gene65988.t1 AT3G26744 32.850 207 124 6 420 618 262 461 1.39e-17 86.7
MS.gene65988.t1 AT3G24140 29.524 210 125 6 445 633 177 384 6.10e-17 84.0
MS.gene65988.t1 AT3G24140 29.524 210 125 6 445 633 177 384 8.00e-17 83.6
MS.gene65988.t1 AT2G22750 30.516 213 129 4 407 610 93 295 1.18e-16 82.0
MS.gene65988.t1 AT2G22750 30.516 213 129 4 407 610 93 295 1.20e-16 82.0
MS.gene65988.t1 AT2G22750 30.516 213 129 4 407 610 89 291 1.42e-16 82.0
MS.gene65988.t1 AT1G12860 34.591 159 97 3 461 618 265 417 1.59e-16 82.8
MS.gene65988.t1 AT2G22750 30.516 213 129 4 407 610 65 267 1.87e-16 81.3
MS.gene65988.t1 AT2G22750 30.516 213 129 4 407 610 65 267 2.18e-16 80.9
MS.gene65988.t1 AT1G12860 34.591 159 97 3 461 618 265 417 2.32e-16 82.4
MS.gene65988.t1 AT4G29930 33.125 160 81 4 447 605 43 177 3.56e-16 79.0
MS.gene65988.t1 AT4G29930 33.125 160 81 4 447 605 43 177 6.13e-16 77.8
MS.gene65988.t1 AT4G29930 31.677 161 85 4 447 605 43 180 1.75e-15 76.6
MS.gene65988.t1 AT2G28160 35.294 136 77 4 467 601 135 260 2.02e-15 78.2
MS.gene65988.t1 AT2G28160 35.294 136 77 4 467 601 135 260 2.38e-15 77.8
MS.gene65988.t1 AT4G29930 32.544 169 99 5 447 605 43 206 5.32e-15 75.9
MS.gene65988.t1 AT4G29930 32.544 169 99 5 447 605 43 206 5.32e-15 75.9
MS.gene65988.t1 AT4G29930 32.544 169 99 5 447 605 43 206 7.60e-15 75.5
MS.gene65988.t1 AT5G41315 26.857 175 114 3 457 618 440 613 1.87e-14 77.4
MS.gene65988.t1 AT5G41315 27.957 186 108 5 69 234 32 211 6.19e-14 75.5
MS.gene65988.t1 AT5G41315 26.857 175 114 3 457 618 443 616 1.88e-14 77.4
MS.gene65988.t1 AT5G41315 27.957 186 108 5 69 234 35 214 6.22e-14 75.5
MS.gene65988.t1 AT5G41315 26.857 175 114 3 457 618 435 608 2.01e-14 77.0
MS.gene65988.t1 AT5G41315 27.957 186 108 5 69 234 27 206 6.71e-14 75.5
MS.gene65988.t1 AT4G00480 29.348 184 104 6 69 231 36 214 3.51e-14 75.9
MS.gene65988.t1 AT4G00480 27.523 218 130 7 35 231 4 214 4.15e-14 75.9
MS.gene65988.t1 AT4G00480 29.348 184 104 6 69 231 36 214 6.01e-14 75.5
MS.gene65988.t1 AT5G10570 28.718 195 112 3 436 630 126 293 8.48e-14 73.2
MS.gene65988.t1 AT4G29930 54.237 59 27 0 465 523 56 114 1.46e-13 70.1
MS.gene65988.t1 AT2G22760 32.317 164 89 5 452 610 112 258 2.82e-13 71.2
MS.gene65988.t1 AT2G22760 32.317 164 89 5 452 610 112 258 5.10e-13 70.9
MS.gene65988.t1 AT2G16910 31.875 160 90 5 467 611 318 473 7.64e-13 72.0
MS.gene65988.t1 AT2G22770 26.519 181 125 3 457 629 123 303 4.53e-12 68.2
MS.gene65988.t1 AT1G10610 33.333 144 85 5 464 605 168 302 1.93e-11 66.6
MS.gene65988.t1 AT1G10610 33.333 144 85 5 464 605 235 369 2.16e-11 66.6
MS.gene65988.t1 AT1G10610 33.333 144 85 5 464 605 265 399 2.44e-11 66.6

Find 166 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCGTAGAGCGTAGAATTTC+TGG 0.101182 8.1:+37374862 None:intergenic
CAGCGATGCTTTGTCCATTT+TGG 0.142541 8.1:+37374821 None:intergenic
TCCTTGTGCATCACCAATTT+TGG 0.145524 8.1:+37374368 None:intergenic
TCTCTTCTTTCTTCCAAAAT+TGG 0.173669 8.1:-37374381 MS.gene65988:CDS
GAGCTTAATACGTTGATTTC+AGG 0.216229 8.1:-37375926 MS.gene65988:CDS
CTACGATGAGCCTGTTCTTC+TGG 0.239522 8.1:+37375962 None:intergenic
GGATATTGAAGTGAAGATTA+TGG 0.243770 8.1:-37374589 MS.gene65988:CDS
CTCAGAATCTCCCCGGATTC+TGG 0.249063 8.1:+37375257 None:intergenic
TGGCTACACCGCTGCTCGGC+TGG 0.254416 8.1:-37376042 MS.gene65988:CDS
CCTCCGACCTCTCTAATTTC+TGG 0.263738 8.1:-37376237 MS.gene65988:CDS
GGTTCCAAATGTTTCCAAAA+TGG 0.283532 8.1:-37374835 MS.gene65988:CDS
TCCATCGTCAATGCTGCTTC+TGG 0.290947 8.1:+37375124 None:intergenic
CAAACAATATGAATAACATT+TGG 0.318173 8.1:-37376297 None:intergenic
AACGGCCACGAACCTGTTTC+AGG 0.325408 8.1:+37375575 None:intergenic
GGCTACACCGCTGCTCGGCT+GGG 0.333611 8.1:-37376041 MS.gene65988:CDS
TCCATACAACGCTGATCTAA+TGG 0.343232 8.1:-37375630 MS.gene65988:CDS
CCGCTGCTCGGCTGGGGTGA+TGG 0.351635 8.1:-37376034 MS.gene65988:CDS
CTCTTCTAAGTTAATTGACT+TGG 0.357805 8.1:-37374610 MS.gene65988:CDS
AGTTCTTATATCACCGGAAA+TGG 0.362072 8.1:-37375215 MS.gene65988:CDS
CGTTTCTTCGGTCGCTTCCC+TGG 0.384757 8.1:+37374963 None:intergenic
TCCATTAGATCAGCGTTGTA+TGG 0.386007 8.1:+37375629 None:intergenic
AGTAGCAGGGTGGTTGAGCC+AGG 0.388458 8.1:-37374981 MS.gene65988:CDS
AGGTGAATTGGAGAAACAAT+TGG 0.390081 8.1:-37374733 MS.gene65988:CDS
AATTTCAACAATCCTGAAAC+AGG 0.392528 8.1:-37375587 MS.gene65988:CDS
TCAACCCCGGTGTGGATCAC+CGG 0.394753 8.1:-37375779 MS.gene65988:CDS
GGAATGCTTTCGTTTACTTC+CGG 0.395195 8.1:-37375104 MS.gene65988:CDS
AGAAAAGAAAGTTCCATTTC+CGG 0.399215 8.1:+37375202 None:intergenic
TGAAGGAAGGAGAGAGTAGC+AGG 0.399337 8.1:-37374995 MS.gene65988:CDS
CGTCTTCAAGCTCTGATTGA+AGG 0.400185 8.1:-37376121 MS.gene65988:CDS
AAACAATATGAATAACATTT+GGG 0.401501 8.1:-37376296 None:intergenic
ATCGTTCTCGCTCGTTGTAA+TGG 0.403129 8.1:+37375547 None:intergenic
GATTGTTGCATTTGCAGAAA+TGG 0.404323 8.1:+37375427 None:intergenic
TGGGTTGGGATGCTATGATT+AGG 0.406285 8.1:-37374569 MS.gene65988:CDS
GATATTGAAGTGAAGATTAT+GGG 0.406522 8.1:-37374588 MS.gene65988:CDS
TGGTGTTTCCGTTAGAGTAC+TGG 0.408218 8.1:+37375370 None:intergenic
TACTAATTCTGTCTGTGAAC+GGG 0.410519 8.1:-37375744 MS.gene65988:CDS
TCCGGGGAGATTCTGAGTTT+CGG 0.416724 8.1:-37375251 MS.gene65988:CDS
TCATTACCGTTTGAAACAAA+TGG 0.429184 8.1:-37375398 MS.gene65988:CDS
GGTGGTTGAGCTTGCTTCTA+CGG 0.430762 8.1:-37375660 MS.gene65988:CDS
GGAATCGTCTAAAGGTGAAT+TGG 0.437083 8.1:-37374745 MS.gene65988:CDS
CAGCCCCGGTGATCCACACC+GGG 0.439785 8.1:+37375774 None:intergenic
GTTGAACCATTTGTTTCAAA+CGG 0.440221 8.1:+37375392 None:intergenic
AGGTACGGTGGCGGTGTTAA+CGG 0.442453 8.1:+37375463 None:intergenic
CAACCCCGGTGTGGATCACC+GGG 0.445985 8.1:-37375778 MS.gene65988:CDS
ATCCATGGACCCGTGCTTCA+CGG 0.447935 8.1:+37375720 None:intergenic
TCCATGGACCCGTGCTTCAC+GGG 0.448599 8.1:+37375721 None:intergenic
CGAGGTAGAAAACCGGCTAA+TGG 0.451911 8.1:-37374942 MS.gene65988:CDS
TCAATGCTGCTTCTGGATAC+AGG 0.460912 8.1:+37375131 None:intergenic
GGTTCAATGAAACCAGAATC+CGG 0.461046 8.1:-37375269 MS.gene65988:CDS
AGAACGATCCTTCATCTGTC+TGG 0.464418 8.1:-37375532 MS.gene65988:CDS
TCATCCTGCGGCGAAGTTGA+TGG 0.465184 8.1:-37374526 MS.gene65988:CDS
GGGTGCAACAAAGAAGGAAC+TGG 0.478542 8.1:-37374712 MS.gene65988:CDS
GCCCGTGAAGCACGGGTCCA+TGG 0.483730 8.1:-37375722 MS.gene65988:CDS
ATAAGCCTGGCTCAATGATC+CGG 0.483928 8.1:+37375808 None:intergenic
TGAAGTGAAGATTATGGGTT+GGG 0.485063 8.1:-37374583 MS.gene65988:CDS
TGTGGATCACCGGGGCTGAA+AGG 0.486911 8.1:-37375769 MS.gene65988:CDS
TCAGCCCCGGTGATCCACAC+CGG 0.489282 8.1:+37375773 None:intergenic
GGTTCTTCTCTTCCATTAGC+CGG 0.494454 8.1:+37374930 None:intergenic
TCTCTCCGCCTCTGCAGCTA+TGG 0.499397 8.1:-37375501 MS.gene65988:CDS
GTGAACGGGCCCGTGAAGCA+CGG 0.499419 8.1:-37375730 MS.gene65988:CDS
GCTACACCGCTGCTCGGCTG+GGG 0.501207 8.1:-37376040 MS.gene65988:CDS
AGTCACGCCTCCAGAAGAAC+AGG 0.501819 8.1:-37375972 MS.gene65988:CDS
TCAAGCAGCCGAGGTGGAGG+CGG 0.502710 8.1:-37375053 MS.gene65988:CDS
TTGAAGGCGCGAAAGAAAGC+TGG 0.503041 8.1:-37376105 MS.gene65988:CDS
GCCGCCATCAACTTCGCCGC+AGG 0.505374 8.1:+37374522 None:intergenic
ATTAGTAAGCCTTTCAGCCC+CGG 0.505431 8.1:+37375760 None:intergenic
ATTTCTGCAAATGCAACAAT+CGG 0.506942 8.1:-37375425 MS.gene65988:CDS
GGTGAATTGGAGAAACAATT+GGG 0.509336 8.1:-37374732 MS.gene65988:CDS
GAAATCGAAGCTACAAGGGC+TGG 0.510964 8.1:-37374766 MS.gene65988:CDS
TCAACAAGCTTCTGTTAACA+TGG 0.511118 8.1:-37374436 MS.gene65988:CDS
GAAATGGATGCGTTCATAGC+AGG 0.511885 8.1:+37375443 None:intergenic
TGTTGTGATGGAGGAGGCAC+TGG 0.512388 8.1:+37376175 None:intergenic
GCCGAGCAGCGGTGTAGCCA+TGG 0.518239 8.1:+37376045 None:intergenic
AAGAAAAGTTCTTATATCAC+CGG 0.523073 8.1:-37375221 MS.gene65988:CDS
CAATCCTTTGTCAACGGCAC+CGG 0.524318 8.1:-37375827 MS.gene65988:CDS
CGGCACCGGATCATTGAGCC+AGG 0.525212 8.1:-37375813 MS.gene65988:CDS
TTGAAGTGAAGATTATGGGT+TGG 0.525361 8.1:-37374584 MS.gene65988:CDS
TGAACGGGCCCGTGAAGCAC+GGG 0.527585 8.1:-37375729 MS.gene65988:CDS
TCAGAGCTTGAAGACGGTGT+TGG 0.533151 8.1:+37376128 None:intergenic
AAATCAAGCAGCCGAGGTGG+AGG 0.534413 8.1:-37375056 MS.gene65988:CDS
TCCAAAATTGGTGATGCACA+AGG 0.537190 8.1:-37374369 MS.gene65988:CDS
TCATTGAGCCAGACAGATGA+AGG 0.541127 8.1:+37375524 None:intergenic
GTTCAATGAAACCAGAATCC+GGG 0.541459 8.1:-37375268 MS.gene65988:CDS
CTTGATTTCATATTTGAAGA+CGG 0.542319 8.1:+37375071 None:intergenic
AATTCCATTAGATAAAGAAA+AGG 0.545738 8.1:-37374655 MS.gene65988:CDS
CAAGGGCTGGAATCGTCTAA+AGG 0.545942 8.1:-37374753 MS.gene65988:CDS
TCTAGATGTTTCTGCTGTGA+AGG 0.546467 8.1:-37375012 MS.gene65988:CDS
GGGGTGATGGATATTACAAA+GGG 0.549464 8.1:-37376021 MS.gene65988:CDS
CTTAATACGTTGATTTCAGG+TGG 0.552157 8.1:-37375923 MS.gene65988:CDS
GAATTGAAATCGAAGCTACA+AGG 0.554225 8.1:-37374771 MS.gene65988:CDS
ACAATTGGGTGCAACAAAGA+AGG 0.555028 8.1:-37374718 MS.gene65988:CDS
ACCGAAACTCAGAATCTCCC+CGG 0.557140 8.1:+37375250 None:intergenic
ACCATGGCTACACCGCTGCT+CGG 0.557176 8.1:-37376046 MS.gene65988:CDS
AGCCATGGTGTAATCATAAG+AGG 0.557540 8.1:+37376060 None:intergenic
TTACTAATTCTGTCTGTGAA+CGG 0.561586 8.1:-37375745 MS.gene65988:CDS
GATGTTTCTGCTGTGAAGGA+AGG 0.568459 8.1:-37375008 MS.gene65988:CDS
GAAATTAGAGAGGTCGGAGG+TGG 0.568481 8.1:+37376240 None:intergenic
TGAGCAAAGTTAACTGCAGT+TGG 0.569736 8.1:+37375350 None:intergenic
ATGGACAAAGCATCGCTGCT+AGG 0.569855 8.1:-37374816 MS.gene65988:CDS
GAAGTTGCGGAATGTGGTGT+TGG 0.570968 8.1:+37376211 None:intergenic
GAAGAAACGAGGTAGAAAAC+CGG 0.575492 8.1:-37374949 MS.gene65988:CDS
GTTGTTGAAGTTGCGGAATG+TGG 0.580780 8.1:+37376205 None:intergenic
GGACGACAACTCCTCCGTCA+TGG 0.585254 8.1:-37376275 MS.gene65988:CDS
ACAATCCTGAAACAGGTTCG+TGG 0.586854 8.1:-37375580 MS.gene65988:CDS
GGGTTGAATTGAAATAAGCC+TGG 0.588534 8.1:+37375795 None:intergenic
AAGCCAGAAATTAGAGAGGT+CGG 0.590490 8.1:+37376234 None:intergenic
GGATGCGTTCATAGCAGGTA+CGG 0.591035 8.1:+37375448 None:intergenic
CCATCACCCCAGCCGAGCAG+CGG 0.593117 8.1:+37376034 None:intergenic
TGATCCGGTGCCGTTGACAA+AGG 0.593288 8.1:+37375823 None:intergenic
GGCTTATTTCAATTCAACCC+CGG 0.593927 8.1:-37375792 MS.gene65988:CDS
TCGAATTTCCATAGCTGCAG+AGG 0.593973 8.1:+37375493 None:intergenic
GTATACCAACGTCTTCAAGC+GGG 0.595425 8.1:-37375682 MS.gene65988:CDS
ATACCAAGGTCTGAAATCCA+TGG 0.602600 8.1:+37375705 None:intergenic
GTCGGTGACATCTTCCTCAA+CGG 0.604811 8.1:+37375880 None:intergenic
TGTCTCAGATGATGCCGTTG+AGG 0.605605 8.1:-37375894 MS.gene65988:CDS
ATTCTACGCTCTACGCGCTG+TGG 0.607114 8.1:-37374856 MS.gene65988:CDS
CGATGAGCCTGTTCTTCTGG+AGG 0.609042 8.1:+37375965 None:intergenic
AATTTCCATAGCTGCAGAGG+CGG 0.609907 8.1:+37375496 None:intergenic
ATGAAATCAAGCAGCCGAGG+TGG 0.610118 8.1:-37375059 MS.gene65988:CDS
GGCGTTGAAAGACTTAGACT+TGG 0.610935 8.1:-37374502 MS.gene65988:CDS
CAACAAGCTTCTGTTAACAT+GGG 0.613453 8.1:-37374435 MS.gene65988:CDS
GTAGCAGGGTGGTTGAGCCA+GGG 0.614057 8.1:-37374980 MS.gene65988:CDS
TGGTGCAGTTGTTGAAGTTG+CGG 0.614269 8.1:+37376198 None:intergenic
TGGTTCAACCAGTACTCTAA+CGG 0.614412 8.1:-37375378 MS.gene65988:CDS
AAATCAACGTATTAAGCTCA+CGG 0.614664 8.1:+37375930 None:intergenic
CTTCAATCAGAGCTTGAAGA+CGG 0.614935 8.1:+37376122 None:intergenic
TCTGCTTCTACATGATTCAA+CGG 0.616515 8.1:+37374909 None:intergenic
TGTGATGGAGGAGGCACTGG+TGG 0.617060 8.1:+37376178 None:intergenic
CAGAATCTCCGCCTCCACCT+CGG 0.617972 8.1:+37375045 None:intergenic
ATTTCAATTCAACCCCGGTG+TGG 0.618802 8.1:-37375787 MS.gene65988:CDS
AACATAGACTGTTGTGATGG+AGG 0.624047 8.1:+37376166 None:intergenic
TTGAACATAGACTGTTGTGA+TGG 0.627469 8.1:+37376163 None:intergenic
ATGACTCAATCCTTTGTCAA+CGG 0.630282 8.1:-37375833 MS.gene65988:CDS
GTTCATAGCAGGTACGGTGG+CGG 0.631090 8.1:+37375454 None:intergenic
GGTCCATGGATTTCAGACCT+TGG 0.633269 8.1:-37375708 MS.gene65988:CDS
CTCGTTGTAATGGAATTCAA+CGG 0.633434 8.1:+37375557 None:intergenic
GGAAGGAGAGAGTAGCAGGG+TGG 0.637372 8.1:-37374991 MS.gene65988:CDS
TCCTGCGGCGAAGTTGATGG+CGG 0.639474 8.1:-37374523 MS.gene65988:CDS
TCCAGAAGCAGCATTGACGA+TGG 0.640563 8.1:-37375125 MS.gene65988:CDS
TGGGGTGATGGATATTACAA+AGG 0.644784 8.1:-37376022 MS.gene65988:CDS
TGTATACCAACGTCTTCAAG+CGG 0.647168 8.1:-37375683 MS.gene65988:CDS
TTCAATGAAACCAGAATCCG+GGG 0.651102 8.1:-37375267 MS.gene65988:CDS
ACCACCCCGCTTGAAGACGT+TGG 0.653527 8.1:+37375677 None:intergenic
TGCGTTCATAGCAGGTACGG+TGG 0.654930 8.1:+37375451 None:intergenic
GGGAAGCGACCGAAGAAACG+AGG 0.656232 8.1:-37374960 MS.gene65988:CDS
ATAGACTGTTGTGATGGAGG+AGG 0.660918 8.1:+37376169 None:intergenic
GGTCATGAAAGCTTCCATGA+CGG 0.664445 8.1:+37376261 None:intergenic
TATACCAACGTCTTCAAGCG+GGG 0.672915 8.1:-37375681 MS.gene65988:CDS
TACAAAGGGGAAGATGACAA+AGG 0.675098 8.1:-37376007 MS.gene65988:CDS
AAGATGTCACCGACACTGAG+TGG 0.679436 8.1:-37375871 MS.gene65988:CDS
CATGAAAGCTTCCATGACGG+AGG 0.681601 8.1:+37376264 None:intergenic
CCAGAAATTAGAGAGGTCGG+AGG 0.681653 8.1:+37376237 None:intergenic
GAAGGAAGGAGAGAGTAGCA+GGG 0.683186 8.1:-37374994 MS.gene65988:CDS
AATTGAAATCGAAGCTACAA+GGG 0.684780 8.1:-37374770 MS.gene65988:CDS
AGACGTTGGTATACATACCA+AGG 0.685367 8.1:+37375691 None:intergenic
AATATGAAATCAAGCAGCCG+AGG 0.686490 8.1:-37375062 MS.gene65988:CDS
GGATTGCCAGAAAATCGCGT+AGG 0.687237 8.1:+37376081 None:intergenic
TGAAGACGGTAAGACTACAC+CGG 0.689623 8.1:+37375085 None:intergenic
TACGGTGGCGGTGTTAACGG+TGG 0.695013 8.1:+37375466 None:intergenic
ATCCTCTTATGATTACACCA+TGG 0.705200 8.1:-37376062 MS.gene65988:CDS
ACCAACGTCTTCAAGCGGGG+TGG 0.708219 8.1:-37375678 MS.gene65988:CDS
TTGGAAGCCAGAAATTAGAG+AGG 0.708961 8.1:+37376230 None:intergenic
CAGCAAGAAGAATCATCCTG+CGG 0.713584 8.1:-37374538 MS.gene65988:CDS
AGCCCCGGTGATCCACACCG+GGG 0.732020 8.1:+37375775 None:intergenic
AACCCCGGTGTGGATCACCG+GGG 0.772910 8.1:-37375777 MS.gene65988:CDS
GGGTGATGGATATTACAAAG+GGG 0.787460 8.1:-37376020 MS.gene65988:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTCCATTAGATAAAGAAA+AGG - chr8.1:37375996-37376015 MS.gene65988:CDS 20.0%
!!! TTTTCTTTATCTAATGGAAT+TGG + chr8.1:37375997-37376016 None:intergenic 20.0%
! AAGAAAAGTTCTTATATCAC+CGG - chr8.1:37375430-37375449 MS.gene65988:CDS 25.0%
! CTTGATTTCATATTTGAAGA+CGG + chr8.1:37375583-37375602 None:intergenic 25.0%
! GATATTGAAGTGAAGATTAT+GGG - chr8.1:37376063-37376082 MS.gene65988:CDS 25.0%
!! TTCTCCTTTTCTTTATCTAA+TGG + chr8.1:37376003-37376022 None:intergenic 25.0%
AAATCAACGTATTAAGCTCA+CGG + chr8.1:37374724-37374743 None:intergenic 30.0%
AATTGAAATCGAAGCTACAA+GGG - chr8.1:37375881-37375900 MS.gene65988:CDS 30.0%
AATTTCAACAATCCTGAAAC+AGG - chr8.1:37375064-37375083 MS.gene65988:CDS 30.0%
AGAAAAGAAAGTTCCATTTC+CGG + chr8.1:37375452-37375471 None:intergenic 30.0%
ATTTCTGCAAATGCAACAAT+CGG - chr8.1:37375226-37375245 MS.gene65988:CDS 30.0%
CTCTTCTAAGTTAATTGACT+TGG - chr8.1:37376041-37376060 MS.gene65988:CDS 30.0%
GGATATTGAAGTGAAGATTA+TGG - chr8.1:37376062-37376081 MS.gene65988:CDS 30.0%
GTTGAACCATTTGTTTCAAA+CGG + chr8.1:37375262-37375281 None:intergenic 30.0%
TCTCTTCTTTCTTCCAAAAT+TGG - chr8.1:37376270-37376289 MS.gene65988:CDS 30.0%
TTACTAATTCTGTCTGTGAA+CGG - chr8.1:37374906-37374925 MS.gene65988:CDS 30.0%
! TCATTACCGTTTGAAACAAA+TGG - chr8.1:37375253-37375272 MS.gene65988:CDS 30.0%
! TCTTTTTCTGTTTTCTTCAC+TGG + chr8.1:37375494-37375513 None:intergenic 30.0%
!! TTGTCCATTTTGGAAACATT+TGG + chr8.1:37375823-37375842 None:intergenic 30.0%
AGGTGAATTGGAGAAACAAT+TGG - chr8.1:37375918-37375937 MS.gene65988:CDS 35.0%
AGTTCTTATATCACCGGAAA+TGG - chr8.1:37375436-37375455 MS.gene65988:CDS 35.0%
ATCCTCTTATGATTACACCA+TGG - chr8.1:37374589-37374608 MS.gene65988:CDS 35.0%
ATGACTCAATCCTTTGTCAA+CGG - chr8.1:37374818-37374837 MS.gene65988:CDS 35.0%
CAACAAGCTTCTGTTAACAT+GGG - chr8.1:37376216-37376235 MS.gene65988:CDS 35.0%
GAATTGAAATCGAAGCTACA+AGG - chr8.1:37375880-37375899 MS.gene65988:CDS 35.0%
GATTGTTGCATTTGCAGAAA+TGG + chr8.1:37375227-37375246 None:intergenic 35.0%
GGTGAATTGGAGAAACAATT+GGG - chr8.1:37375919-37375938 MS.gene65988:CDS 35.0%
GGTTCCAAATGTTTCCAAAA+TGG - chr8.1:37375816-37375835 MS.gene65988:CDS 35.0%
TACTAATTCTGTCTGTGAAC+GGG - chr8.1:37374907-37374926 MS.gene65988:CDS 35.0%
TCAACAAGCTTCTGTTAACA+TGG - chr8.1:37376215-37376234 MS.gene65988:CDS 35.0%
TCTGCTTCTACATGATTCAA+CGG + chr8.1:37375745-37375764 None:intergenic 35.0%
TGAAGTGAAGATTATGGGTT+GGG - chr8.1:37376068-37376087 MS.gene65988:CDS 35.0%
TTGAACATAGACTGTTGTGA+TGG + chr8.1:37374491-37374510 None:intergenic 35.0%
TTGAAGTGAAGATTATGGGT+TGG - chr8.1:37376067-37376086 MS.gene65988:CDS 35.0%
! CTCGTTGTAATGGAATTCAA+CGG + chr8.1:37375097-37375116 None:intergenic 35.0%
! CTGAAGGAACTGAATTTTTC+TGG - chr8.1:37375361-37375380 MS.gene65988:CDS 35.0%
! GGAAATGGAACTTTCTTTTC+TGG - chr8.1:37375451-37375470 MS.gene65988:CDS 35.0%
!! CTTAATACGTTGATTTCAGG+TGG - chr8.1:37374728-37374747 MS.gene65988:CDS 35.0%
!! GAGCTTAATACGTTGATTTC+AGG - chr8.1:37374725-37374744 MS.gene65988:CDS 35.0%
AACATAGACTGTTGTGATGG+AGG + chr8.1:37374488-37374507 None:intergenic 40.0%
AAGCCAGAAATTAGAGAGGT+CGG + chr8.1:37374420-37374439 None:intergenic 40.0%
AATATGAAATCAAGCAGCCG+AGG - chr8.1:37375589-37375608 MS.gene65988:CDS 40.0%
ACAATTGGGTGCAACAAAGA+AGG - chr8.1:37375933-37375952 MS.gene65988:CDS 40.0%
AGACGTTGGTATACATACCA+AGG + chr8.1:37374963-37374982 None:intergenic 40.0%
AGCCATGGTGTAATCATAAG+AGG + chr8.1:37374594-37374613 None:intergenic 40.0%
CTTCAATCAGAGCTTGAAGA+CGG + chr8.1:37374532-37374551 None:intergenic 40.0%
GAAGAAACGAGGTAGAAAAC+CGG - chr8.1:37375702-37375721 MS.gene65988:CDS 40.0%
GAGAAAAAACCACTCAGTGT+CGG + chr8.1:37374792-37374811 None:intergenic 40.0%
GGAATCGTCTAAAGGTGAAT+TGG - chr8.1:37375906-37375925 MS.gene65988:CDS 40.0%
GGAATGCTTTCGTTTACTTC+CGG - chr8.1:37375547-37375566 MS.gene65988:CDS 40.0%
GGCTTATTTCAATTCAACCC+CGG - chr8.1:37374859-37374878 MS.gene65988:CDS 40.0%
GGGTTGAATTGAAATAAGCC+TGG + chr8.1:37374859-37374878 None:intergenic 40.0%
GGTTCAATGAAACCAGAATC+CGG - chr8.1:37375382-37375401 MS.gene65988:CDS 40.0%
GTTCAATGAAACCAGAATCC+GGG - chr8.1:37375383-37375402 MS.gene65988:CDS 40.0%
GTTCCTTCAGAAAAAAGCTC+TGG + chr8.1:37375351-37375370 None:intergenic 40.0%
TACAAAGGGGAAGATGACAA+AGG - chr8.1:37374644-37374663 MS.gene65988:CDS 40.0%
TCCATACAACGCTGATCTAA+TGG - chr8.1:37375021-37375040 MS.gene65988:CDS 40.0%
TCCATTAGATCAGCGTTGTA+TGG + chr8.1:37375025-37375044 None:intergenic 40.0%
TGAGCAAAGTTAACTGCAGT+TGG + chr8.1:37375304-37375323 None:intergenic 40.0%
TGGTTCAACCAGTACTCTAA+CGG - chr8.1:37375273-37375292 MS.gene65988:CDS 40.0%
TGTATACCAACGTCTTCAAG+CGG - chr8.1:37374968-37374987 MS.gene65988:CDS 40.0%
TTCAATGAAACCAGAATCCG+GGG - chr8.1:37375384-37375403 MS.gene65988:CDS 40.0%
TTGGAAGCCAGAAATTAGAG+AGG + chr8.1:37374424-37374443 None:intergenic 40.0%
! ATACCAAGGTCTGAAATCCA+TGG + chr8.1:37374949-37374968 None:intergenic 40.0%
! GGTTTTCTACCTCGTTTCTT+CGG + chr8.1:37375703-37375722 None:intergenic 40.0%
! TCAGAAAAAAGCTCTGGTTC+TGG + chr8.1:37375345-37375364 None:intergenic 40.0%
! TCCTTGTGCATCACCAATTT+TGG + chr8.1:37376286-37376305 None:intergenic 40.0%
! TCTAGATGTTTCTGCTGTGA+AGG - chr8.1:37375639-37375658 MS.gene65988:CDS 40.0%
!! GGGGTGATGGATATTACAAA+GGG - chr8.1:37374630-37374649 MS.gene65988:CDS 40.0%
!! GGGTGATGGATATTACAAAG+GGG - chr8.1:37374631-37374650 MS.gene65988:CDS 40.0%
!! TCCAAAATTGGTGATGCACA+AGG - chr8.1:37376282-37376301 MS.gene65988:CDS 40.0%
!! TGGGGTGATGGATATTACAA+AGG - chr8.1:37374629-37374648 MS.gene65988:CDS 40.0%
!!! GAACCAGAGCTTTTTTCTGA+AGG - chr8.1:37375345-37375364 MS.gene65988:CDS 40.0%
AATTTCCATAGCTGCAGAGG+CGG + chr8.1:37375158-37375177 None:intergenic 45.0%
ACAATCCTGAAACAGGTTCG+TGG - chr8.1:37375071-37375090 MS.gene65988:CDS 45.0%
AGAACGATCCTTCATCTGTC+TGG - chr8.1:37375119-37375138 MS.gene65988:CDS 45.0%
ATAAGCCTGGCTCAATGATC+CGG + chr8.1:37374846-37374865 None:intergenic 45.0%
ATCGTTCTCGCTCGTTGTAA+TGG + chr8.1:37375107-37375126 None:intergenic 45.0%
ATTAGTAAGCCTTTCAGCCC+CGG + chr8.1:37374894-37374913 None:intergenic 45.0%
ATTTCAATTCAACCCCGGTG+TGG - chr8.1:37374864-37374883 MS.gene65988:CDS 45.0%
CAGCAAGAAGAATCATCCTG+CGG - chr8.1:37376113-37376132 MS.gene65988:CDS 45.0%
GAAATGGATGCGTTCATAGC+AGG + chr8.1:37375211-37375230 None:intergenic 45.0%
GGTCATGAAAGCTTCCATGA+CGG + chr8.1:37374393-37374412 None:intergenic 45.0%
GGTTCTTCTCTTCCATTAGC+CGG + chr8.1:37375724-37375743 None:intergenic 45.0%
GTATACCAACGTCTTCAAGC+GGG - chr8.1:37374969-37374988 MS.gene65988:CDS 45.0%
GTTGTTGAAGTTGCGGAATG+TGG + chr8.1:37374449-37374468 None:intergenic 45.0%
TATACCAACGTCTTCAAGCG+GGG - chr8.1:37374970-37374989 MS.gene65988:CDS 45.0%
TCATTGAGCCAGACAGATGA+AGG + chr8.1:37375130-37375149 None:intergenic 45.0%
TCGAATTTCCATAGCTGCAG+AGG + chr8.1:37375161-37375180 None:intergenic 45.0%
TGAAGACGGTAAGACTACAC+CGG + chr8.1:37375569-37375588 None:intergenic 45.0%
TGGTGCAGTTGTTGAAGTTG+CGG + chr8.1:37374456-37374475 None:intergenic 45.0%
TGGTGTTTCCGTTAGAGTAC+TGG + chr8.1:37375284-37375303 None:intergenic 45.0%
! ATAGACTGTTGTGATGGAGG+AGG + chr8.1:37374485-37374504 None:intergenic 45.0%
! CAGCGATGCTTTGTCCATTT+TGG + chr8.1:37375833-37375852 None:intergenic 45.0%
! CGTCTTCAAGCTCTGATTGA+AGG - chr8.1:37374530-37374549 MS.gene65988:CDS 45.0%
! GATGTTTCTGCTGTGAAGGA+AGG - chr8.1:37375643-37375662 MS.gene65988:CDS 45.0%
! GGCGTTGAAAGACTTAGACT+TGG - chr8.1:37376149-37376168 MS.gene65988:CDS 45.0%
! TCAATGCTGCTTCTGGATAC+AGG + chr8.1:37375523-37375542 None:intergenic 45.0%
! TGGGTTGGGATGCTATGATT+AGG - chr8.1:37376082-37376101 MS.gene65988:CDS 45.0%
AAGATGTCACCGACACTGAG+TGG - chr8.1:37374780-37374799 MS.gene65988:CDS 50.0%
ACCGAAACTCAGAATCTCCC+CGG + chr8.1:37375404-37375423 None:intergenic 50.0%
ATGAAATCAAGCAGCCGAGG+TGG - chr8.1:37375592-37375611 MS.gene65988:CDS 50.0%
CAAGGGCTGGAATCGTCTAA+AGG - chr8.1:37375898-37375917 MS.gene65988:CDS 50.0%
CAATCCTTTGTCAACGGCAC+CGG - chr8.1:37374824-37374843 MS.gene65988:CDS 50.0%
CATGAAAGCTTCCATGACGG+AGG + chr8.1:37374390-37374409 None:intergenic 50.0%
CCAGAAATTAGAGAGGTCGG+AGG + chr8.1:37374417-37374436 None:intergenic 50.0%
CCTCCGACCTCTCTAATTTC+TGG - chr8.1:37374414-37374433 MS.gene65988:CDS 50.0%
CGAGGTAGAAAACCGGCTAA+TGG - chr8.1:37375709-37375728 MS.gene65988:CDS 50.0%
CGCGTAGAGCGTAGAATTTC+TGG + chr8.1:37375792-37375811 None:intergenic 50.0%
CTACGATGAGCCTGTTCTTC+TGG + chr8.1:37374692-37374711 None:intergenic 50.0%
GAAATCGAAGCTACAAGGGC+TGG - chr8.1:37375885-37375904 MS.gene65988:CDS 50.0%
GAAATTAGAGAGGTCGGAGG+TGG + chr8.1:37374414-37374433 None:intergenic 50.0%
GAAGGAAGGAGAGAGTAGCA+GGG - chr8.1:37375657-37375676 MS.gene65988:CDS 50.0%
GAAGTTGCGGAATGTGGTGT+TGG + chr8.1:37374443-37374462 None:intergenic 50.0%
GGATGCGTTCATAGCAGGTA+CGG + chr8.1:37375206-37375225 None:intergenic 50.0%
GGATTGCCAGAAAATCGCGT+AGG + chr8.1:37374573-37374592 None:intergenic 50.0%
GGGTGCAACAAAGAAGGAAC+TGG - chr8.1:37375939-37375958 MS.gene65988:CDS 50.0%
GGTCCATGGATTTCAGACCT+TGG - chr8.1:37374943-37374962 MS.gene65988:CDS 50.0%
GTCGGTGACATCTTCCTCAA+CGG + chr8.1:37374774-37374793 None:intergenic 50.0%
TCAGAGCTTGAAGACGGTGT+TGG + chr8.1:37374526-37374545 None:intergenic 50.0%
TCCGGGGAGATTCTGAGTTT+CGG - chr8.1:37375400-37375419 MS.gene65988:CDS 50.0%
TGAAGGAAGGAGAGAGTAGC+AGG - chr8.1:37375656-37375675 MS.gene65988:CDS 50.0%
TGTCTCAGATGATGCCGTTG+AGG - chr8.1:37374757-37374776 MS.gene65988:CDS 50.0%
! GGTGGTTGAGCTTGCTTCTA+CGG - chr8.1:37374991-37375010 MS.gene65988:CDS 50.0%
! TCCATCGTCAATGCTGCTTC+TGG + chr8.1:37375530-37375549 None:intergenic 50.0%
! TTGAAGGCGCGAAAGAAAGC+TGG - chr8.1:37374546-37374565 MS.gene65988:CDS 50.0%
!! ATGGACAAAGCATCGCTGCT+AGG - chr8.1:37375835-37375854 MS.gene65988:CDS 50.0%
!! TCCAGAAGCAGCATTGACGA+TGG - chr8.1:37375526-37375545 MS.gene65988:CDS 50.0%
AAATCAAGCAGCCGAGGTGG+AGG - chr8.1:37375595-37375614 MS.gene65988:CDS 55.0%
AACGGCCACGAACCTGTTTC+AGG + chr8.1:37375079-37375098 None:intergenic 55.0%
AGTCACGCCTCCAGAAGAAC+AGG - chr8.1:37374679-37374698 MS.gene65988:CDS 55.0%
ATCCATGGACCCGTGCTTCA+CGG + chr8.1:37374934-37374953 None:intergenic 55.0%
ATTCTACGCTCTACGCGCTG+TGG - chr8.1:37375795-37375814 MS.gene65988:CDS 55.0%
CGATGAGCCTGTTCTTCTGG+AGG + chr8.1:37374689-37374708 None:intergenic 55.0%
CTCAGAATCTCCCCGGATTC+TGG + chr8.1:37375397-37375416 None:intergenic 55.0%
GTTCATAGCAGGTACGGTGG+CGG + chr8.1:37375200-37375219 None:intergenic 55.0%
TCATCCTGCGGCGAAGTTGA+TGG - chr8.1:37376125-37376144 MS.gene65988:CDS 55.0%
TGCGTTCATAGCAGGTACGG+TGG + chr8.1:37375203-37375222 None:intergenic 55.0%
! AGGTACGGTGGCGGTGTTAA+CGG + chr8.1:37375191-37375210 None:intergenic 55.0%
! GCTGGACCTACGCGATTTTC+TGG - chr8.1:37374564-37374583 MS.gene65988:CDS 55.0%
! TGTTGTGATGGAGGAGGCAC+TGG + chr8.1:37374479-37374498 None:intergenic 55.0%
!! TGATCCGGTGCCGTTGACAA+AGG + chr8.1:37374831-37374850 None:intergenic 55.0%
ACCAACGTCTTCAAGCGGGG+TGG - chr8.1:37374973-37374992 MS.gene65988:CDS 60.0%
ACCACCCCGCTTGAAGACGT+TGG + chr8.1:37374977-37374996 None:intergenic 60.0%
ACCATGGCTACACCGCTGCT+CGG - chr8.1:37374605-37374624 MS.gene65988:CDS 60.0%
AGTAGCAGGGTGGTTGAGCC+AGG - chr8.1:37375670-37375689 MS.gene65988:CDS 60.0%
CAGAATCTCCGCCTCCACCT+CGG + chr8.1:37375609-37375628 None:intergenic 60.0%
CGTTTCTTCGGTCGCTTCCC+TGG + chr8.1:37375691-37375710 None:intergenic 60.0%
GGAAGGAGAGAGTAGCAGGG+TGG - chr8.1:37375660-37375679 MS.gene65988:CDS 60.0%
GGACGACAACTCCTCCGTCA+TGG - chr8.1:37374376-37374395 MS.gene65988:CDS 60.0%
GGGAAGCGACCGAAGAAACG+AGG - chr8.1:37375691-37375710 MS.gene65988:CDS 60.0%
GTAGCAGGGTGGTTGAGCCA+GGG - chr8.1:37375671-37375690 MS.gene65988:CDS 60.0%
TCAACCCCGGTGTGGATCAC+CGG - chr8.1:37374872-37374891 MS.gene65988:CDS 60.0%
TCCATGGACCCGTGCTTCAC+GGG + chr8.1:37374933-37374952 None:intergenic 60.0%
TCTCTCCGCCTCTGCAGCTA+TGG - chr8.1:37375150-37375169 MS.gene65988:CDS 60.0%
TGTGGATCACCGGGGCTGAA+AGG - chr8.1:37374882-37374901 MS.gene65988:CDS 60.0%
! TACGGTGGCGGTGTTAACGG+TGG + chr8.1:37375188-37375207 None:intergenic 60.0%
!! TCCTGCGGCGAAGTTGATGG+CGG - chr8.1:37376128-37376147 MS.gene65988:CDS 60.0%
!! TGTGATGGAGGAGGCACTGG+TGG + chr8.1:37374476-37374495 None:intergenic 60.0%
AACCCCGGTGTGGATCACCG+GGG - chr8.1:37374874-37374893 MS.gene65988:CDS 65.0%
CAACCCCGGTGTGGATCACC+GGG - chr8.1:37374873-37374892 MS.gene65988:CDS 65.0%
GTGAACGGGCCCGTGAAGCA+CGG - chr8.1:37374921-37374940 MS.gene65988:CDS 65.0%
TCAAGCAGCCGAGGTGGAGG+CGG - chr8.1:37375598-37375617 MS.gene65988:CDS 65.0%
TCAGCCCCGGTGATCCACAC+CGG + chr8.1:37374881-37374900 None:intergenic 65.0%
TGAACGGGCCCGTGAAGCAC+GGG - chr8.1:37374922-37374941 MS.gene65988:CDS 65.0%
! CGGCACCGGATCATTGAGCC+AGG - chr8.1:37374838-37374857 MS.gene65988:CDS 65.0%
AGCCCCGGTGATCCACACCG+GGG + chr8.1:37374879-37374898 None:intergenic 70.0%
CAGCCCCGGTGATCCACACC+GGG + chr8.1:37374880-37374899 None:intergenic 70.0%
CCATCACCCCAGCCGAGCAG+CGG + chr8.1:37374620-37374639 None:intergenic 70.0%
GCCCGTGAAGCACGGGTCCA+TGG - chr8.1:37374929-37374948 MS.gene65988:CDS 70.0%
GCCGAGCAGCGGTGTAGCCA+TGG + chr8.1:37374609-37374628 None:intergenic 70.0%
GCCGCCATCAACTTCGCCGC+AGG + chr8.1:37376132-37376151 None:intergenic 70.0%
GCTACACCGCTGCTCGGCTG+GGG - chr8.1:37374611-37374630 MS.gene65988:CDS 70.0%
GGCTACACCGCTGCTCGGCT+GGG - chr8.1:37374610-37374629 MS.gene65988:CDS 70.0%
TGGCTACACCGCTGCTCGGC+TGG - chr8.1:37374609-37374628 MS.gene65988:CDS 70.0%
CCGCTGCTCGGCTGGGGTGA+TGG - chr8.1:37374617-37374636 MS.gene65988:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 37374362 37376311 37374362 ID=MS.gene65988
chr8.1 mRNA 37374362 37376311 37374362 ID=MS.gene65988.t1;Parent=MS.gene65988
chr8.1 exon 37374362 37376311 37374362 ID=MS.gene65988.t1.exon1;Parent=MS.gene65988.t1
chr8.1 CDS 37374362 37376311 37374362 ID=cds.MS.gene65988.t1;Parent=MS.gene65988.t1
Gene Sequence

>MS.gene65988

ATGAATAACATTTGGGACGACAACTCCTCCGTCATGGAAGCTTTCATGACCACCTCCGACCTCTCTAATTTCTGGCTTCCAACACCACATTCCGCAACTTCAACAACTGCACCACCAGTGCCTCCTCCATCACAACAGTCTATGTTCAATCAAGAGACTCTCCAACACCGTCTTCAAGCTCTGATTGAAGGCGCGAAAGAAAGCTGGACCTACGCGATTTTCTGGCAATCCTCTTATGATTACACCATGGCTACACCGCTGCTCGGCTGGGGTGATGGATATTACAAAGGGGAAGATGACAAAGGAAAACTGAAACGAGTCACGCCTCCAGAAGAACAGGCTCATCGTAGAAAGATTCTCCGTGAGCTTAATACGTTGATTTCAGGTGGTTCGTCTGTCTCAGATGATGCCGTTGAGGAAGATGTCACCGACACTGAGTGGTTTTTTCTCACGTCGATGACTCAATCCTTTGTCAACGGCACCGGATCATTGAGCCAGGCTTATTTCAATTCAACCCCGGTGTGGATCACCGGGGCTGAAAGGCTTACTAATTCTGTCTGTGAACGGGCCCGTGAAGCACGGGTCCATGGATTTCAGACCTTGGTATGTATACCAACGTCTTCAAGCGGGGTGGTTGAGCTTGCTTCTACGGAAATGATTCCATACAACGCTGATCTAATGGAGAAGATTCGTGTTTTGTTTAATTTCAACAATCCTGAAACAGGTTCGTGGCCGTTGAATTCCATTACAACGAGCGAGAACGATCCTTCATCTGTCTGGCTCAATGATCTCTCCGCCTCTGCAGCTATGGAAATTCGAGATACCACCGTTAACACCGCCACCGTACCTGCTATGAACGCATCCATTTCTGCAAATGCAACAATCGGTAAATCATTACCGTTTGAAACAAATGGTTCAACCAGTACTCTAACGGAAACACCAACTGCAGTTAACTTTGCTCAGCGTCAGAATCAGAACAACCAGAACCAGAGCTTTTTTCTGAAGGAACTGAATTTTTCTGGTTCAATGAAACCAGAATCCGGGGAGATTCTGAGTTTCGGTGAAAGTAAGAAAAGTTCTTATATCACCGGAAATGGAACTTTCTTTTCTGGTCAGTCACAGTTCGTTGCCAGTGAAGAAAACAGAAAAAGAAAGTCTCCTGTATCCAGAAGCAGCATTGACGATGGAATGCTTTCGTTTACTTCCGGTGTAGTCTTACCGTCTTCAAATATGAAATCAAGCAGCCGAGGTGGAGGCGGAGATTCTGATCATTCAGATCTAGATGTTTCTGCTGTGAAGGAAGGAGAGAGTAGCAGGGTGGTTGAGCCAGGGAAGCGACCGAAGAAACGAGGTAGAAAACCGGCTAATGGAAGAGAAGAACCGTTGAATCATGTAGAAGCAGAGAGACAGAGAAGAGAAAAGCTTAACCAGAAATTCTACGCTCTACGCGCTGTGGTTCCAAATGTTTCCAAAATGGACAAAGCATCGCTGCTAGGCGATGCTATTTCTTATATAAACGAATTGAAATCGAAGCTACAAGGGCTGGAATCGTCTAAAGGTGAATTGGAGAAACAATTGGGTGCAACAAAGAAGGAACTGGAACTTGTTACTAGTAAAAATCAAAATCAAAATCCAATTCCATTAGATAAAGAAAAGGAGAAAACAACAAGCTCAACAAGCTCTTCTAAGTTAATTGACTTGGATATTGAAGTGAAGATTATGGGTTGGGATGCTATGATTAGGATTCAATGCAGCAAGAAGAATCATCCTGCGGCGAAGTTGATGGCGGCGTTGAAAGACTTAGACTTGGATGTTAATCATGCTAGTGTGTCTGTTGTGAATGATTTGATGATTCAACAAGCTTCTGTTAACATGGGAAGTCGATTTTACACACAAGAACAACTTTTGTCTCTTCTTTCTTCCAAAATTGGTGATGCACAAGGAGATTGA
Protein sequence

>MS.gene65988.t1

MNNIWDDNSSVMEAFMTTSDLSNFWLPTPHSATSTTAPPVPPPSQQSMFNQETLQHRLQALIEGAKESWTYAIFWQSSYDYTMATPLLGWGDGYYKGEDDKGKLKRVTPPEEQAHRRKILRELNTLISGGSSVSDDAVEEDVTDTEWFFLTSMTQSFVNGTGSLSQAYFNSTPVWITGAERLTNSVCERAREARVHGFQTLVCIPTSSSGVVELASTEMIPYNADLMEKIRVLFNFNNPETGSWPLNSITTSENDPSSVWLNDLSASAAMEIRDTTVNTATVPAMNASISANATIGKSLPFETNGSTSTLTETPTAVNFAQRQNQNNQNQSFFLKELNFSGSMKPESGEILSFGESKKSSYITGNGTFFSGQSQFVASEENRKRKSPVSRSSIDDGMLSFTSGVVLPSSNMKSSSRGGGGDSDHSDLDVSAVKEGESSRVVEPGKRPKKRGRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQGLESSKGELEKQLGATKKELELVTSKNQNQNPIPLDKEKEKTTSSTSSSKLIDLDIEVKIMGWDAMIRIQCSKKNHPAAKLMAALKDLDLDVNHASVSVVNDLMIQQASVNMGSRFYTQEQLLSLLSSKIGDAQGD