AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene66375

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66375.t1 MTR_4g059560 97.391 115 3 0 81 195 201 315 2.31e-80 245
MS.gene66375.t1 MTR_4g059560 97.391 115 3 0 81 195 201 315 2.03e-79 244
MS.gene66375.t1 MTR_4g059560 85.714 42 6 0 196 237 374 415 6.28e-19 85.1
MS.gene66375.t1 MTR_2g094090 82.609 115 20 0 81 195 203 317 3.00e-66 208
MS.gene66375.t1 MTR_2g094090 82.609 115 20 0 81 195 203 317 4.49e-65 207
MS.gene66375.t1 MTR_4g094242 94.937 79 4 0 1 79 20 98 2.00e-35 123
MS.gene66375.t1 MTR_5g067150 38.261 115 71 0 81 195 85 199 9.04e-20 87.4
MS.gene66375.t1 MTR_5g067150 38.261 115 71 0 81 195 85 199 9.27e-20 87.8
MS.gene66375.t1 MTR_2g049790 30.120 166 108 4 37 195 51 215 9.96e-20 87.8
MS.gene66375.t1 MTR_5g067150 38.261 115 71 0 81 195 85 199 1.07e-19 87.0
MS.gene66375.t1 MTR_6g048250 37.607 117 72 1 80 196 94 209 2.20e-19 85.9
MS.gene66375.t1 MTR_6g048250 37.607 117 72 1 80 196 94 209 3.52e-19 86.3
MS.gene66375.t1 MTR_6g012990 36.752 117 73 1 80 196 94 209 3.97e-19 85.1
MS.gene66375.t1 MTR_6g048250 37.607 117 72 1 80 196 94 209 3.98e-19 85.9
MS.gene66375.t1 MTR_4g114670 31.098 164 106 3 34 195 43 201 6.33e-19 84.7
MS.gene66375.t1 MTR_6g012990 36.752 117 73 1 80 196 94 209 6.41e-19 85.5
MS.gene66375.t1 MTR_4g114670 31.098 164 106 3 34 195 43 201 8.76e-19 84.7
MS.gene66375.t1 MTR_3g466400 36.111 108 62 3 90 195 103 205 1.62e-18 84.3
MS.gene66375.t1 MTR_8g024600 32.174 115 78 0 81 195 10 124 2.37e-18 83.2
MS.gene66375.t1 MTR_3g072320 40.860 93 53 1 105 195 109 201 3.44e-18 83.2
MS.gene66375.t1 MTR_1g040875 42.105 95 54 1 102 195 122 216 4.20e-18 82.8
MS.gene66375.t1 MTR_8g024600 32.174 115 78 0 81 195 93 207 4.54e-18 82.8
MS.gene66375.t1 MTR_8g024590 32.174 115 78 0 81 195 93 207 4.65e-18 82.8
MS.gene66375.t1 MTR_3g099920 34.483 116 75 1 81 196 95 209 6.77e-18 82.4
MS.gene66375.t1 MTR_2g016340 38.776 98 58 1 100 195 106 203 7.86e-18 82.0
MS.gene66375.t1 MTR_8g086380 31.624 117 77 2 81 195 102 217 1.10e-17 82.0
MS.gene66375.t1 MTR_1g013700 33.898 118 75 2 81 196 89 205 1.61e-17 81.3
MS.gene66375.t1 MTR_4g029020 33.898 118 75 2 80 195 87 203 2.06e-17 80.9
MS.gene66375.t1 MTR_4g128820 26.738 187 124 5 19 195 16 199 6.99e-17 79.3
MS.gene66375.t1 MTR_1g103760 33.898 118 75 2 81 196 88 204 7.93e-17 79.3
MS.gene66375.t1 MTR_7g072575 37.755 98 59 1 100 195 106 203 5.49e-16 76.6
MS.gene66375.t1 MTR_4g006970 27.907 172 117 4 28 196 45 212 5.87e-16 76.6
MS.gene66375.t1 MTR_5g088350 34.426 122 68 3 81 195 89 205 6.93e-16 76.6
MS.gene66375.t1 MTR_5g088350 32.479 117 77 1 81 195 89 205 8.71e-16 75.5
MS.gene66375.t1 MTR_5g088350 32.479 117 77 1 81 195 89 205 1.30e-15 75.5
MS.gene66375.t1 MTR_1g076370 30.556 180 114 5 26 195 36 214 1.34e-15 75.5
MS.gene66375.t1 MTR_4g131060 34.694 98 62 1 100 195 112 209 2.57e-15 74.7
MS.gene66375.t1 MTR_3g096230 32.031 128 86 1 67 194 308 434 2.85e-15 74.7
MS.gene66375.t1 MTR_3g096230 32.031 128 86 1 67 194 308 434 3.45e-15 74.7
MS.gene66375.t1 MTR_5g075060 32.653 98 64 1 100 195 106 203 9.09e-15 73.2
MS.gene66375.t1 MTR_2g105010 29.661 118 80 2 81 196 90 206 1.01e-14 73.2
MS.gene66375.t1 MTR_5g075100 33.673 98 63 1 100 195 118 215 1.19e-14 72.8
MS.gene66375.t1 MTR_3g466480 33.333 96 62 1 102 195 117 212 1.50e-14 72.4
MS.gene66375.t1 MTR_4g107280 36.441 118 67 3 81 195 133 245 1.63e-14 72.4
MS.gene66375.t1 MTR_8g079560 34.146 123 70 3 79 195 93 210 1.76e-14 72.0
MS.gene66375.t1 MTR_4g107280 36.441 118 67 3 81 195 172 284 1.85e-14 72.4
MS.gene66375.t1 MTR_5g059880 37.168 113 64 3 84 191 267 377 1.97e-14 72.4
MS.gene66375.t1 MTR_2g045470 32.203 118 76 2 81 195 16 132 2.49e-14 71.6
MS.gene66375.t1 MTR_5g008860 33.043 115 76 1 81 194 217 331 2.85e-14 72.0
MS.gene66375.t1 MTR_2g045470 32.203 118 76 2 81 195 96 212 2.98e-14 71.6
MS.gene66375.t1 MTR_1g048630 37.500 96 59 1 100 195 100 194 3.08e-14 72.0
MS.gene66375.t1 MTR_7g116390 32.990 97 65 0 99 195 111 207 3.17e-14 70.9
MS.gene66375.t1 MTR_6g071280 41.111 90 49 1 110 195 161 250 3.52e-14 70.9
MS.gene66375.t1 MTR_8g093730 31.250 128 87 1 67 194 363 489 3.87e-14 71.6
MS.gene66375.t1 MTR_7g113490 36.283 113 69 2 81 191 149 260 4.29e-14 71.6
MS.gene66375.t1 MTR_3g095620 33.913 115 65 4 90 195 103 215 6.52e-14 69.7
MS.gene66375.t1 MTR_5g018050 32.520 123 72 3 79 195 88 205 6.57e-14 69.3
MS.gene66375.t1 MTR_5g018050 32.520 123 72 3 79 195 55 172 7.55e-14 70.1
MS.gene66375.t1 MTR_5g018050 32.520 123 72 3 79 195 88 205 7.69e-14 70.1
MS.gene66375.t1 MTR_6g470940 34.646 127 51 3 100 195 972 1097 1.04e-13 70.5
MS.gene66375.t1 MTR_4g086855 33.333 123 71 3 79 195 93 210 1.40e-13 69.3
MS.gene66375.t1 MTR_6g012980 29.915 117 81 1 80 196 148 263 1.79e-13 69.3
MS.gene66375.t1 MTR_5g059940 37.168 113 64 3 84 191 200 310 1.84e-13 69.3
MS.gene66375.t1 MTR_1g034030 33.333 123 71 3 79 195 94 211 1.90e-13 68.9
MS.gene66375.t1 MTR_1g034030 33.333 123 71 3 79 195 94 211 1.94e-13 68.9
MS.gene66375.t1 MTR_5g013550 34.146 123 70 3 79 195 76 193 2.14e-13 68.9
MS.gene66375.t1 MTR_5g060350 37.168 113 64 3 84 191 396 506 3.22e-13 68.9
MS.gene66375.t1 MTR_4g086855 33.333 120 69 3 82 195 1 115 4.44e-13 67.4
MS.gene66375.t1 MTR_1g081000 27.848 158 84 5 66 195 39 194 4.84e-13 68.2
MS.gene66375.t1 MTR_1g081000 27.848 158 84 5 66 195 39 194 5.04e-13 68.2
MS.gene66375.t1 MTR_7g073520 39.394 99 52 3 100 195 243 336 5.07e-13 68.2
MS.gene66375.t1 MTR_4g099240 33.333 123 71 3 79 195 75 192 6.94e-13 67.4
MS.gene66375.t1 MTR_5g064540 33.333 123 71 3 79 195 74 191 7.58e-13 66.6
MS.gene66375.t1 MTR_4g094415 37.113 97 58 2 96 191 255 349 7.68e-13 67.4
MS.gene66375.t1 MTR_2g023890 33.333 123 76 3 72 194 71 187 8.17e-13 67.0
MS.gene66375.t1 MTR_4g094415 37.113 97 58 2 96 191 255 349 9.69e-13 67.4
MS.gene66375.t1 MTR_2g005290 35.780 109 54 2 99 191 105 213 1.00e-12 67.0
MS.gene66375.t1 MTR_8g095330 33.333 123 71 3 79 195 75 192 1.21e-12 66.6
MS.gene66375.t1 MTR_1g071480 30.370 135 71 5 81 195 63 194 1.31e-12 67.0
MS.gene66375.t1 MTR_2g088020 39.423 104 54 4 91 194 95 189 1.41e-12 66.6
MS.gene66375.t1 MTR_4g123940 29.060 117 81 1 81 195 102 218 1.41e-12 66.6
MS.gene66375.t1 MTR_3g040520 24.551 167 124 2 26 191 62 227 1.47e-12 67.0
MS.gene66375.t1 MTR_3g086940 33.333 126 67 5 79 195 75 192 1.49e-12 66.2
MS.gene66375.t1 MTR_4g123940 29.060 117 81 1 81 195 102 218 1.51e-12 66.6
MS.gene66375.t1 MTR_5g064540 33.333 123 71 3 79 195 74 191 1.52e-12 66.2
MS.gene66375.t1 MTR_8g098845 35.484 93 59 1 99 191 149 240 2.00e-12 66.2
MS.gene66375.t1 MTR_4g075410 34.783 115 68 3 81 191 95 206 2.17e-12 66.6
MS.gene66375.t1 MTR_4g075410 34.783 115 68 3 81 191 95 206 2.22e-12 66.6
MS.gene66375.t1 MTR_5g017140 34.783 92 59 1 100 191 102 192 2.32e-12 65.5
MS.gene66375.t1 MTR_5g059910 36.607 112 58 3 100 200 226 335 2.67e-12 65.9
MS.gene66375.t1 MTR_4g005730 40.230 87 49 1 109 192 128 214 2.76e-12 66.2
MS.gene66375.t1 MTR_3g437510 34.021 97 63 1 100 195 106 202 2.78e-12 64.7
MS.gene66375.t1 MTR_3g073250 36.449 107 61 3 90 191 364 468 2.80e-12 65.9
MS.gene66375.t1 MTR_2g085200 32.143 112 75 1 81 191 211 322 2.90e-12 66.2
MS.gene66375.t1 MTR_4g005730 40.230 87 49 1 109 192 128 214 2.95e-12 66.2
MS.gene66375.t1 MTR_4g005730 40.230 87 49 1 109 192 128 214 3.04e-12 66.2
MS.gene66375.t1 MTR_4g074875 33.913 115 69 3 81 191 95 206 3.08e-12 66.2
MS.gene66375.t1 MTR_4g074875 33.913 115 69 3 81 191 95 206 3.10e-12 66.2
MS.gene66375.t1 MTR_1g105290 32.143 112 73 2 81 190 136 246 3.36e-12 65.9
MS.gene66375.t1 MTR_3g073250 36.449 107 61 3 90 191 351 455 3.47e-12 65.9
MS.gene66375.t1 MTR_1g105290 32.143 112 73 2 81 190 136 246 3.55e-12 65.9
MS.gene66375.t1 MTR_1g105290 32.143 112 73 2 81 190 136 246 3.76e-12 65.9
MS.gene66375.t1 MTR_3g040810 23.952 167 125 2 26 191 60 225 4.56e-12 65.5
MS.gene66375.t1 MTR_8g089975 32.520 123 72 3 79 195 74 191 5.02e-12 64.7
MS.gene66375.t1 MTR_4g078290 24.500 200 133 4 2 191 126 317 5.17e-12 65.5
MS.gene66375.t1 MTR_4g078290 24.500 200 133 4 2 191 126 317 5.18e-12 65.5
MS.gene66375.t1 MTR_0154s0040 36.957 92 55 2 100 191 100 188 5.92e-12 64.7
MS.gene66375.t1 MTR_0154s0020 36.957 92 55 2 100 191 100 188 6.26e-12 64.7
MS.gene66375.t1 MTR_4g088750 28.846 156 100 6 46 195 243 393 6.64e-12 65.1
MS.gene66375.t1 MTR_6g006770 39.773 88 48 2 109 192 120 206 7.26e-12 65.1
MS.gene66375.t1 MTR_3g054080 30.631 111 77 0 81 191 91 201 7.82e-12 64.7
MS.gene66375.t1 MTR_3g097320 31.707 123 73 3 79 195 74 191 1.01e-11 63.9
MS.gene66375.t1 MTR_2g078740 32.143 112 76 0 81 192 89 200 1.26e-11 64.3
MS.gene66375.t1 MTR_2g078740 32.143 112 76 0 81 192 89 200 1.26e-11 64.3
MS.gene66375.t1 MTR_2g078740 32.143 112 76 0 81 192 89 200 1.28e-11 64.3
MS.gene66375.t1 MTR_4g019410 31.200 125 79 4 81 202 94 214 1.31e-11 64.3
MS.gene66375.t1 MTR_4g005830 41.573 89 48 1 110 194 183 271 1.32e-11 63.9
MS.gene66375.t1 MTR_8g024100 34.746 118 72 4 81 195 90 205 1.34e-11 64.3
MS.gene66375.t1 MTR_5g045190 45.349 86 42 3 110 193 343 425 1.36e-11 64.3
MS.gene66375.t1 MTR_0189s0010 36.957 92 55 2 100 191 120 208 1.46e-11 63.5
MS.gene66375.t1 MTR_7g095450 27.500 160 88 6 61 195 38 194 1.46e-11 63.9
MS.gene66375.t1 MTR_3g460950 33.333 93 62 0 99 191 129 221 1.60e-11 63.5
MS.gene66375.t1 MTR_3g060330 33.333 93 62 0 99 191 129 221 1.60e-11 63.5
MS.gene66375.t1 MTR_4g019410 31.200 125 79 4 81 202 94 214 1.80e-11 63.5
MS.gene66375.t1 MTR_8g089975 32.500 120 70 3 82 195 1 115 1.85e-11 62.8
MS.gene66375.t1 MTR_4g094430 34.483 87 56 1 106 191 105 191 1.85e-11 62.8
MS.gene66375.t1 MTR_0464s0040 33.721 86 56 1 105 189 111 196 2.26e-11 61.2
MS.gene66375.t1 MTR_2g006330 33.945 109 58 4 96 195 12 115 2.48e-11 62.4
MS.gene66375.t1 MTR_4g080030 32.500 120 77 2 79 195 618 736 2.69e-11 63.2
MS.gene66375.t1 MTR_2g032060 32.955 88 58 1 105 191 104 191 3.12e-11 62.4
MS.gene66375.t1 MTR_2g006330 30.894 123 74 3 79 195 74 191 3.28e-11 62.4
MS.gene66375.t1 MTR_1g090917 31.405 121 66 3 91 195 131 250 3.68e-11 62.8
MS.gene66375.t1 MTR_3g098760 27.679 112 80 1 81 191 174 285 3.69e-11 62.8
MS.gene66375.t1 MTR_1g090917 31.405 121 66 3 91 195 131 250 3.79e-11 62.8
MS.gene66375.t1 MTR_1g090917 31.405 121 66 3 91 195 6 125 3.87e-11 62.4
MS.gene66375.t1 MTR_1g090917 31.405 121 66 3 91 195 6 125 3.97e-11 62.4
MS.gene66375.t1 MTR_2g092980 35.000 120 74 2 79 195 609 727 4.84e-11 62.4
MS.gene66375.t1 MTR_2g092980 35.000 120 74 2 79 195 628 746 4.95e-11 62.4
MS.gene66375.t1 MTR_3g112210 35.484 93 60 0 99 191 129 221 5.26e-11 62.0
MS.gene66375.t1 MTR_2g092980 35.000 120 74 2 79 195 573 691 5.50e-11 62.4
MS.gene66375.t1 MTR_2g092980 35.000 120 74 2 79 195 592 710 5.80e-11 62.4
MS.gene66375.t1 MTR_8g098425 34.545 110 71 1 82 191 487 595 5.99e-11 62.4
MS.gene66375.t1 MTR_2g040510 33.600 125 74 3 79 202 142 258 7.57e-11 61.6
MS.gene66375.t1 MTR_7g078690 33.696 92 60 1 100 191 136 226 7.95e-11 61.6
MS.gene66375.t1 MTR_4g087620 35.484 93 59 1 99 191 152 243 8.21e-11 60.8
MS.gene66375.t1 MTR_1g080020 34.343 99 63 2 97 195 101 197 8.48e-11 60.8
MS.gene66375.t1 MTR_4g087620 35.484 93 59 1 99 191 152 243 9.11e-11 61.2
MS.gene66375.t1 MTR_5g017110 34.783 92 59 1 100 191 103 193 9.14e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66375.t1 AT5G60550 75.214 117 27 1 81 195 191 307 1.51e-57 188
MS.gene66375.t1 AT3G45240 73.043 115 31 0 81 195 192 306 3.97e-56 184
MS.gene66375.t1 AT3G45240 73.043 115 31 0 81 195 192 306 3.97e-56 184
MS.gene66375.t1 AT3G45240 73.043 115 28 1 81 195 192 303 3.10e-54 179
MS.gene66375.t1 AT5G64180 79.747 79 16 0 1 79 22 100 8.65e-29 106
MS.gene66375.t1 AT5G64180 79.747 79 16 0 1 79 22 100 8.65e-29 106
MS.gene66375.t1 AT3G29160 34.351 131 84 2 66 196 82 210 4.64e-20 87.8
MS.gene66375.t1 AT4G24400 37.391 115 72 0 81 195 85 199 9.77e-20 87.4
MS.gene66375.t1 AT3G29160 34.351 131 84 2 66 196 82 210 1.14e-19 87.8
MS.gene66375.t1 AT3G29160 34.351 131 84 2 66 196 82 210 1.14e-19 87.8
MS.gene66375.t1 AT4G24400 37.391 115 72 0 81 195 85 199 1.35e-19 87.4
MS.gene66375.t1 AT2G26980 38.525 122 63 3 81 195 90 206 2.09e-19 84.7
MS.gene66375.t1 AT2G26980 39.837 123 60 4 81 195 90 206 2.47e-19 86.3
MS.gene66375.t1 AT2G26980 39.837 123 60 4 81 195 90 206 2.88e-19 86.3
MS.gene66375.t1 AT2G26980 39.837 123 60 4 81 195 100 216 3.07e-19 86.3
MS.gene66375.t1 AT3G23000 30.978 184 115 4 23 195 35 217 3.52e-19 85.9
MS.gene66375.t1 AT4G14580 30.682 176 113 3 28 195 40 214 4.22e-19 85.9
MS.gene66375.t1 AT2G26980 38.525 122 63 3 81 195 90 206 4.45e-19 85.5
MS.gene66375.t1 AT5G35410 27.660 188 122 3 19 195 17 201 7.59e-19 84.7
MS.gene66375.t1 AT3G01090 37.069 116 72 1 81 196 118 232 8.26e-19 85.1
MS.gene66375.t1 AT3G01090 37.069 116 72 1 81 196 95 209 8.97e-19 85.1
MS.gene66375.t1 AT3G01090 37.069 116 72 1 81 196 95 209 8.97e-19 85.1
MS.gene66375.t1 AT5G35410 27.660 188 122 3 19 195 17 201 1.36e-18 84.3
MS.gene66375.t1 AT5G57630 35.965 114 71 2 82 195 1 112 2.17e-18 82.8
MS.gene66375.t1 AT5G57630 35.652 115 72 2 81 195 88 200 2.53e-18 83.6
MS.gene66375.t1 AT5G57630 35.652 115 72 2 81 195 88 200 2.97e-18 83.2
MS.gene66375.t1 AT1G01140 30.601 183 110 5 24 195 35 211 7.03e-18 82.4
MS.gene66375.t1 AT1G01140 29.282 181 115 4 24 195 35 211 7.75e-18 82.0
MS.gene66375.t1 AT1G01140 30.601 183 110 5 24 195 35 211 8.17e-18 82.0
MS.gene66375.t1 AT5G45820 34.483 116 73 2 82 195 89 203 1.23e-17 81.6
MS.gene66375.t1 AT5G01810 38.776 98 58 1 100 195 106 203 1.25e-17 81.6
MS.gene66375.t1 AT5G01810 38.776 98 58 1 100 195 106 203 1.25e-17 81.6
MS.gene66375.t1 AT2G25090 29.012 162 103 2 44 196 58 216 1.43e-17 81.6
MS.gene66375.t1 AT5G01810 38.776 98 58 1 100 195 106 203 1.52e-17 80.9
MS.gene66375.t1 AT4G30960 37.755 98 59 1 100 195 118 215 3.47e-17 80.5
MS.gene66375.t1 AT5G10930 38.776 98 58 1 100 195 107 204 3.61e-17 80.1
MS.gene66375.t1 AT1G30270 33.898 118 74 2 81 195 10 126 5.42e-17 79.3
MS.gene66375.t1 AT1G30270 33.898 118 74 2 81 195 107 223 7.00e-17 79.7
MS.gene66375.t1 AT1G30270 33.898 118 74 2 81 195 107 223 8.21e-17 79.3
MS.gene66375.t1 AT5G39440 34.351 131 83 3 66 196 81 208 1.32e-16 78.6
MS.gene66375.t1 AT5G25110 31.624 117 77 2 81 195 119 234 3.14e-16 77.8
MS.gene66375.t1 AT2G38490 35.455 110 64 2 102 209 124 228 4.15e-16 77.0
MS.gene66375.t1 AT2G30360 31.034 116 78 1 82 195 99 214 4.66e-16 77.0
MS.gene66375.t1 AT1G29230 34.513 113 67 2 100 210 168 275 5.82e-16 77.0
MS.gene66375.t1 AT5G21326 35.135 111 65 2 87 195 100 205 7.58e-16 76.3
MS.gene66375.t1 AT1G48490 38.017 121 49 2 100 195 923 1042 7.92e-16 76.6
MS.gene66375.t1 AT1G48490 38.017 121 49 2 100 195 923 1042 7.92e-16 76.6
MS.gene66375.t1 AT1G48490 38.017 121 49 2 100 195 923 1042 7.92e-16 76.6
MS.gene66375.t1 AT1G48490 38.017 121 49 2 100 195 924 1043 7.99e-16 76.6
MS.gene66375.t1 AT4G18700 28.108 185 118 6 23 195 36 217 1.03e-15 76.3
MS.gene66375.t1 AT5G45810 28.108 185 118 6 23 195 38 219 1.09e-15 75.9
MS.gene66375.t1 AT3G50310 40.385 104 55 3 99 196 102 204 1.26e-15 75.1
MS.gene66375.t1 AT2G34180 34.188 117 74 2 81 195 133 248 2.38e-15 75.1
MS.gene66375.t1 AT5G62310 36.220 127 49 3 100 195 849 974 2.81e-15 75.1
MS.gene66375.t1 AT1G45160 32.394 142 68 2 81 195 746 886 5.88e-15 74.3
MS.gene66375.t1 AT1G45160 32.394 142 68 2 81 195 746 886 6.08e-15 74.3
MS.gene66375.t1 AT5G58380 26.344 186 120 5 23 195 22 203 7.93e-15 73.6
MS.gene66375.t1 AT1G54510 27.879 165 91 6 61 200 38 199 1.90e-14 72.4
MS.gene66375.t1 AT1G54510 27.879 165 91 6 61 200 38 199 1.90e-14 72.4
MS.gene66375.t1 AT1G54510 27.879 165 91 6 61 200 38 199 1.90e-14 72.4
MS.gene66375.t1 AT1G54510 27.879 165 91 6 61 200 38 199 1.90e-14 72.4
MS.gene66375.t1 AT1G30640 29.375 160 67 3 81 195 196 354 2.18e-14 72.4
MS.gene66375.t1 AT1G30640 29.375 160 67 3 81 195 196 354 2.18e-14 72.4
MS.gene66375.t1 AT2G32510 43.333 90 44 3 107 194 105 189 2.42e-14 71.6
MS.gene66375.t1 AT1G51660 39.496 119 64 3 80 194 152 266 3.08e-14 71.6
MS.gene66375.t1 AT1G50240 37.500 96 59 1 100 195 99 193 3.22e-14 72.0
MS.gene66375.t1 AT1G50240 37.500 96 59 1 100 195 99 193 3.22e-14 72.0
MS.gene66375.t1 AT1G30640 29.375 160 67 3 81 195 103 261 3.32e-14 71.6
MS.gene66375.t1 AT1G09000 35.398 113 70 2 81 191 150 261 5.91e-14 71.2
MS.gene66375.t1 AT1G09000 35.398 113 70 2 81 191 150 261 6.40e-14 70.9
MS.gene66375.t1 AT4G33950 33.333 123 71 3 79 195 91 208 9.48e-14 70.1
MS.gene66375.t1 AT4G33950 33.333 123 71 3 79 195 91 208 1.14e-13 69.7
MS.gene66375.t1 AT1G33770 33.929 112 73 1 81 191 218 329 1.39e-13 70.1
MS.gene66375.t1 AT1G53570 27.848 158 103 2 37 194 258 404 1.49e-13 69.7
MS.gene66375.t1 AT4G29810 34.513 113 72 2 81 192 144 255 1.52e-13 69.3
MS.gene66375.t1 AT1G53570 30.469 128 88 1 67 194 278 404 1.53e-13 69.7
MS.gene66375.t1 AT1G53570 27.848 158 103 2 37 194 258 404 1.53e-13 69.7
MS.gene66375.t1 AT1G53570 27.848 158 103 2 37 194 258 404 1.53e-13 69.7
MS.gene66375.t1 AT1G53570 27.848 158 103 2 37 194 258 404 1.64e-13 69.7
MS.gene66375.t1 AT1G53570 27.848 158 103 2 37 194 258 404 1.68e-13 69.7
MS.gene66375.t1 AT3G50500 34.146 123 70 3 79 195 93 210 1.79e-13 69.3
MS.gene66375.t1 AT3G17850 32.283 127 54 3 100 195 977 1102 1.90e-13 69.7
MS.gene66375.t1 AT4G29810 34.513 113 72 2 81 192 153 264 1.98e-13 69.3
MS.gene66375.t1 AT1G63700 30.921 152 103 2 41 191 437 587 2.15e-13 69.7
MS.gene66375.t1 AT1G63700 30.921 152 103 2 41 191 437 587 2.15e-13 69.7
MS.gene66375.t1 AT2G23030 32.520 123 72 3 79 195 74 191 2.19e-13 68.9
MS.gene66375.t1 AT4G29810 33.913 115 74 2 79 192 151 264 2.35e-13 68.9
MS.gene66375.t1 AT2G31010 37.500 120 71 2 79 195 590 708 2.42e-13 69.3
MS.gene66375.t1 AT2G31010 37.500 120 71 2 79 195 590 708 2.42e-13 69.3
MS.gene66375.t1 AT5G18700 35.922 103 57 2 98 195 91 189 2.78e-13 69.3
MS.gene66375.t1 AT5G66880 34.146 123 70 3 79 195 92 209 2.98e-13 68.6
MS.gene66375.t1 AT5G66880 34.146 123 70 3 79 195 92 209 2.98e-13 68.6
MS.gene66375.t1 AT3G17510 33.673 98 63 1 100 195 35 132 3.05e-13 68.6
MS.gene66375.t1 AT1G54960 34.513 113 71 2 81 191 149 260 3.08e-13 68.9
MS.gene66375.t1 AT1G54960 34.513 113 71 2 81 191 149 260 3.08e-13 68.9
MS.gene66375.t1 AT3G17510 33.673 98 63 1 100 195 115 212 3.27e-13 68.6
MS.gene66375.t1 AT1G49180 32.500 120 76 3 79 195 80 197 3.59e-13 68.6
MS.gene66375.t1 AT3G21220 38.655 119 65 3 80 194 143 257 3.87e-13 68.2
MS.gene66375.t1 AT3G21220 38.655 119 65 3 80 194 143 257 3.87e-13 68.2
MS.gene66375.t1 AT4G40010 33.333 123 71 3 79 195 74 191 4.64e-13 67.8
MS.gene66375.t1 AT1G49180 31.707 123 79 3 76 195 77 197 4.91e-13 68.2
MS.gene66375.t1 AT3G50500 33.600 125 75 3 79 195 93 217 5.14e-13 67.8
MS.gene66375.t1 AT5G63650 33.333 123 71 3 79 195 74 191 5.27e-13 67.8
MS.gene66375.t1 AT3G63280 28.125 160 87 7 61 195 92 248 6.16e-13 68.2
MS.gene66375.t1 AT1G71530 33.929 112 73 1 81 191 224 335 6.93e-13 67.8
MS.gene66375.t1 AT1G71530 33.929 112 73 1 81 191 224 335 7.11e-13 67.8
MS.gene66375.t1 AT3G08730 38.384 99 53 3 100 195 229 322 7.28e-13 67.8
MS.gene66375.t1 AT3G08730 38.384 99 53 3 100 195 229 322 7.28e-13 67.8
MS.gene66375.t1 AT1G71530 33.929 112 73 1 81 191 224 335 7.31e-13 67.4
MS.gene66375.t1 AT1G48260 32.653 98 64 1 100 195 21 118 7.39e-13 67.4
MS.gene66375.t1 AT1G48260 32.653 98 64 1 100 195 21 118 7.39e-13 67.4
MS.gene66375.t1 AT1G48260 32.653 98 64 1 100 195 21 118 7.39e-13 67.4
MS.gene66375.t1 AT1G48260 32.653 98 64 1 100 195 21 118 7.39e-13 67.4
MS.gene66375.t1 AT3G63280 28.125 160 87 7 61 195 38 194 8.20e-13 67.8
MS.gene66375.t1 AT3G63280 28.125 160 87 7 61 195 38 194 8.20e-13 67.8
MS.gene66375.t1 AT3G63280 28.125 160 87 7 61 195 38 194 8.20e-13 67.8
MS.gene66375.t1 AT5G10270 25.150 167 123 2 26 191 63 228 8.65e-13 67.4
MS.gene66375.t1 AT3G08720 38.384 99 53 3 100 195 235 328 8.68e-13 67.4
MS.gene66375.t1 AT3G08720 38.384 99 53 3 100 195 235 328 8.68e-13 67.4
MS.gene66375.t1 AT3G08720 38.384 99 53 3 100 195 235 328 8.68e-13 67.4
MS.gene66375.t1 AT3G08720 38.384 99 53 3 100 195 235 328 8.68e-13 67.4
MS.gene66375.t1 AT3G04810 30.370 135 71 5 81 195 63 194 9.21e-13 67.4
MS.gene66375.t1 AT3G04810 30.370 135 71 5 81 195 63 194 9.21e-13 67.4
MS.gene66375.t1 AT3G04810 30.370 135 71 5 81 195 63 194 9.21e-13 67.4
MS.gene66375.t1 AT1G48260 31.532 111 69 2 87 195 98 203 1.01e-12 67.4
MS.gene66375.t1 AT1G71530 33.929 112 73 1 81 191 224 335 1.06e-12 67.4
MS.gene66375.t1 AT5G40440 33.333 135 84 3 82 211 160 293 1.10e-12 67.4
MS.gene66375.t1 AT5G40440 33.333 135 84 3 82 211 160 293 1.10e-12 67.4
MS.gene66375.t1 AT5G40440 35.897 117 69 3 100 211 160 275 1.42e-12 67.0
MS.gene66375.t1 AT5G40440 35.897 117 69 3 100 211 160 275 1.42e-12 67.0
MS.gene66375.t1 AT5G40440 35.897 117 69 3 100 211 160 275 1.42e-12 67.0
MS.gene66375.t1 AT5G40440 33.333 135 84 3 82 211 78 211 1.49e-12 66.6
MS.gene66375.t1 AT3G07980 34.783 115 68 3 81 191 95 206 1.53e-12 67.0
MS.gene66375.t1 AT3G07980 34.783 115 68 3 81 191 95 206 1.64e-12 67.0
MS.gene66375.t1 AT5G64960 25.610 164 120 2 29 191 13 175 1.84e-12 66.6
MS.gene66375.t1 AT1G60940 33.613 119 76 2 79 195 74 191 1.84e-12 66.2
MS.gene66375.t1 AT1G60940 33.613 119 76 2 79 195 74 191 1.84e-12 66.2
MS.gene66375.t1 AT3G13530 34.783 115 68 3 81 191 95 206 1.90e-12 67.0
MS.gene66375.t1 AT5G08590 32.520 123 72 3 79 195 74 191 1.99e-12 66.2
MS.gene66375.t1 AT5G64960 25.150 167 123 2 26 191 63 228 1.99e-12 66.6
MS.gene66375.t1 AT5G58950 35.345 116 64 4 88 195 288 400 2.05e-12 66.6
MS.gene66375.t1 AT1G10940 33.333 123 71 3 79 195 74 191 2.69e-12 65.9
MS.gene66375.t1 AT1G78290 34.127 126 66 5 79 195 74 191 3.02e-12 65.5
MS.gene66375.t1 AT1G78290 34.127 126 66 5 79 195 74 191 3.02e-12 65.5
MS.gene66375.t1 AT1G69220 43.299 97 50 3 99 193 315 408 3.20e-12 66.2
MS.gene66375.t1 AT1G69220 43.299 97 50 3 99 193 342 435 3.37e-12 65.9
MS.gene66375.t1 AT5G28290 28.125 160 87 6 61 195 38 194 3.88e-12 65.9
MS.gene66375.t1 AT5G04510 33.058 121 64 3 91 195 124 243 4.01e-12 65.1
MS.gene66375.t1 AT5G28290 28.125 160 87 6 61 195 38 194 4.15e-12 65.5
MS.gene66375.t1 AT5G28290 28.125 160 87 6 61 195 38 194 4.15e-12 65.5
MS.gene66375.t1 AT4G10010 32.143 112 75 1 81 191 53 164 4.44e-12 65.5
MS.gene66375.t1 AT5G04510 33.058 121 64 3 91 195 124 243 5.18e-12 65.1
MS.gene66375.t1 AT5G08590 35.294 102 55 3 100 195 19 115 5.27e-12 64.3
MS.gene66375.t1 AT4G10010 25.424 177 130 2 16 191 169 344 5.59e-12 65.5
MS.gene66375.t1 AT5G07070 34.694 98 62 1 100 195 106 203 6.43e-12 65.1
MS.gene66375.t1 AT5G39420 29.464 112 78 1 81 191 182 293 6.66e-12 65.1
MS.gene66375.t1 AT4G26070 32.773 119 78 2 77 194 125 242 6.73e-12 64.7
MS.gene66375.t1 AT4G26070 32.773 119 78 2 77 194 137 254 6.84e-12 64.7
MS.gene66375.t1 AT5G04510 33.058 121 64 3 91 195 124 243 8.01e-12 64.7
MS.gene66375.t1 AT4G26070 32.773 119 78 2 77 194 138 255 9.12e-12 64.3
MS.gene66375.t1 AT4G26070 32.773 119 78 2 77 194 138 255 9.12e-12 64.3
MS.gene66375.t1 AT4G26070 32.773 119 78 2 77 194 138 255 1.03e-11 63.9
MS.gene66375.t1 AT5G57565 32.653 98 64 2 81 178 35 130 1.05e-11 61.2
MS.gene66375.t1 AT5G57565 32.653 98 64 2 81 178 35 130 1.05e-11 61.2
MS.gene66375.t1 AT5G01820 32.479 117 69 3 95 209 114 222 1.22e-11 63.9
MS.gene66375.t1 AT5G21222 28.205 117 82 2 81 195 89 205 1.36e-11 64.3
MS.gene66375.t1 AT5G21222 28.205 117 82 2 81 195 89 205 1.36e-11 64.3
MS.gene66375.t1 AT5G21222 28.205 117 82 2 81 195 89 205 1.36e-11 64.3
MS.gene66375.t1 AT5G21222 28.205 117 82 2 81 195 89 205 1.36e-11 64.3
MS.gene66375.t1 AT4G26890 32.192 146 71 5 100 223 98 237 1.39e-11 63.9
MS.gene66375.t1 AT2G17700 34.000 100 64 2 96 195 375 472 1.45e-11 63.9
MS.gene66375.t1 AT5G14720 39.773 88 48 2 109 192 120 206 1.89e-11 63.9
MS.gene66375.t1 AT5G14720 39.773 88 48 2 109 192 120 206 1.89e-11 63.9
MS.gene66375.t1 AT3G45640 35.484 93 59 1 99 191 135 226 2.12e-11 63.2
MS.gene66375.t1 AT3G10540 33.058 121 64 3 91 195 125 244 2.78e-11 63.2
MS.gene66375.t1 AT1G05100 40.449 89 49 3 107 194 109 194 3.05e-11 62.8
MS.gene66375.t1 AT1G53165 35.294 85 55 0 110 194 118 202 3.24e-11 63.2
MS.gene66375.t1 AT3G20860 27.612 134 75 5 81 195 63 193 3.32e-11 62.8
MS.gene66375.t1 AT1G53165 35.294 85 55 0 110 194 118 202 3.36e-11 63.2
MS.gene66375.t1 AT1G53165 35.294 85 55 0 110 194 118 202 3.38e-11 63.2
MS.gene66375.t1 AT1G01560 33.333 93 61 1 99 191 137 228 3.98e-11 62.0
MS.gene66375.t1 AT1G01560 33.333 93 61 1 99 191 137 228 3.98e-11 62.0
MS.gene66375.t1 AT1G12680 34.737 95 59 3 102 196 198 289 4.17e-11 62.4
MS.gene66375.t1 AT1G79640 39.080 87 50 1 109 192 117 203 4.65e-11 62.8
MS.gene66375.t1 AT1G79640 39.080 87 50 1 109 192 117 203 4.78e-11 62.4
MS.gene66375.t1 AT1G79640 39.080 87 50 1 109 192 117 203 4.78e-11 62.4
MS.gene66375.t1 AT1G79640 39.080 87 50 1 109 192 117 203 4.78e-11 62.4
MS.gene66375.t1 AT1G79640 39.080 87 50 1 109 192 120 206 4.83e-11 62.4
MS.gene66375.t1 AT1G01560 33.333 93 61 1 99 191 137 228 5.17e-11 62.0
MS.gene66375.t1 AT5G56580 30.769 117 79 2 79 194 143 258 5.33e-11 62.0
MS.gene66375.t1 AT1G79640 39.080 87 50 1 109 192 117 203 5.45e-11 62.4
MS.gene66375.t1 AT2G18170 32.258 93 63 0 99 191 129 221 5.61e-11 62.0
MS.gene66375.t1 AT1G10940 34.653 101 55 3 101 195 104 199 5.65e-11 62.0
MS.gene66375.t1 AT4G36950 35.417 96 59 2 99 194 102 194 5.92e-11 61.6
MS.gene66375.t1 AT1G01560 33.333 93 61 1 99 191 137 228 6.12e-11 62.0
MS.gene66375.t1 AT2G05060 38.947 95 53 3 100 191 117 209 6.13e-11 61.6
MS.gene66375.t1 AT5G57565 32.258 93 61 2 81 173 35 125 6.30e-11 60.1
MS.gene66375.t1 AT3G59790 35.714 84 53 1 108 191 166 248 8.96e-11 61.6

Find 55 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTACCTGTGCTGGTGTAAA+AGG 0.299913 6.1:-78679433 MS.gene66375:CDS
GCAGCAGATAGCTGGGTTAT+TGG 0.315257 6.1:-78679476 MS.gene66375:intron
CGCTTCGGCTTGTCGTTTCT+CGG 0.321780 6.1:+78681336 None:intergenic
CTGATGTCGCAGCAGATAGC+TGG 0.334212 6.1:-78679484 MS.gene66375:intron
CGAGTAATCAACAGATTATC+AGG 0.338053 6.1:+78680191 None:intergenic
CTTTCGTGTGAAGAAGCTTA+TGG 0.345772 6.1:+78681500 None:intergenic
TTGAATATGTGGAAGACAAA+TGG 0.367242 6.1:-78680565 MS.gene66375:CDS
CGTCATGGTACAGTGAAGAT+AGG 0.380220 6.1:-78680170 MS.gene66375:CDS
AGCTGGGTTATTGGAAATGA+TGG 0.391248 6.1:-78679467 MS.gene66375:CDS
CAATTCCTTTGTACCTGTGC+TGG 0.393642 6.1:-78679442 MS.gene66375:CDS
CAGCACAGGTACAAAGGAAT+TGG 0.402473 6.1:+78679443 None:intergenic
TACTTGCGTGATATAGTTTG+TGG 0.407512 6.1:-78680488 MS.gene66375:CDS
CATTCAGGTGCAGTGAAAAC+AGG 0.428127 6.1:+78679745 None:intergenic
CACCAACCTAAAATACATTC+AGG 0.438538 6.1:+78679730 None:intergenic
GCAGTGAAAACAGGAGTTCC+AGG 0.441173 6.1:+78679754 None:intergenic
TGAATATGTGGAAGACAAAT+GGG 0.441978 6.1:-78680564 MS.gene66375:CDS
GGCGTCGAGTTCTCGTTCTA+AGG 0.445222 6.1:+78681387 None:intergenic
AGCGCGAGCAGCGGCGGTGA+TGG 0.447044 6.1:+78681363 None:intergenic
AAATGGGTTTGTGAAGGTTC+AGG 0.466210 6.1:-78680548 MS.gene66375:CDS
GTCATGGTACAGTGAAGATA+GGG 0.484855 6.1:-78680169 MS.gene66375:CDS
CAATACAGTACTTGAATATG+TGG 0.488989 6.1:-78680576 MS.gene66375:intron
TATAGGTCAACGAAGTATCT+TGG 0.493037 6.1:+78679375 None:intergenic
AGCGGCTTTCTGAGACGCTT+CGG 0.494528 6.1:+78681321 None:intergenic
ATCGAGGAGTTTGATAGTGC+GGG 0.495281 6.1:+78681423 None:intergenic
AGGGGATTTCAGTGTCAGCC+AGG 0.505554 6.1:-78680150 MS.gene66375:CDS
GGCTTGATCGACGGCGAGAG+AGG 0.515596 6.1:+78681444 None:intergenic
GTGGTAAAGCTGCGGACACA+TGG 0.519090 6.1:-78679608 MS.gene66375:CDS
CTCGGAACGAGCGCGAGCAG+CGG 0.520105 6.1:+78681354 None:intergenic
GCGAGCAGCGGCGGTGATGG+CGG 0.529260 6.1:+78681366 None:intergenic
GATATGCTTCGACGATCACC+TGG 0.533902 6.1:-78679772 MS.gene66375:CDS
TGAACAAAATCAGTCAGTAT+AGG 0.535303 6.1:+78679358 None:intergenic
GGAACGAGCGCGAGCAGCGG+CGG 0.547378 6.1:+78681357 None:intergenic
GTTGCATTACCTCACAAGCC+TGG 0.550563 6.1:+78680132 None:intergenic
CAGTGTCAGCCAGGCTTGTG+AGG 0.561168 6.1:-78680141 MS.gene66375:intron
AAAGAAATATTACATGAGCA+TGG 0.564906 6.1:+78680453 None:intergenic
CGAGTTCTCGTTCTAAGGTG+TGG 0.570651 6.1:+78681392 None:intergenic
GATAGTGCGGGCTTGATCGA+CGG 0.571228 6.1:+78681435 None:intergenic
TGATGTCGCAGCAGATAGCT+GGG 0.572732 6.1:-78679483 MS.gene66375:intron
CCTAGCAGTCTCTTCACGTA+AGG 0.574911 6.1:+78680514 None:intergenic
ACTTGTAGCGCGTAATTCAG+CGG 0.576817 6.1:+78681303 None:intergenic
GCTGGGTTATTGGAAATGAT+GGG 0.595401 6.1:-78679466 MS.gene66375:CDS
GCTGCGGACACATGGGCTGT+AGG 0.596139 6.1:-78679600 MS.gene66375:CDS
CCTTACGTGAAGAGACTGCT+AGG 0.601669 6.1:-78680514 MS.gene66375:CDS
TTACACCAGCACAGGTACAA+AGG 0.609234 6.1:+78679437 None:intergenic
AGGTGTGGACGCGCTGATCG+AGG 0.610843 6.1:+78681407 None:intergenic
AATCTGTTGATTACTCGTCA+TGG 0.618110 6.1:-78680185 MS.gene66375:CDS
TAAAAGGAAGAACTTGGTGA+AGG 0.625900 6.1:-78679417 MS.gene66375:CDS
GATCGAGGAGTTTGATAGTG+CGG 0.639356 6.1:+78681422 None:intergenic
GTAACGCAGAATATAGTACA+TGG 0.644939 6.1:-78680224 MS.gene66375:intron
TGGTAAAGCTGCGGACACAT+GGG 0.652835 6.1:-78679607 MS.gene66375:CDS
TCATGGTACAGTGAAGATAG+GGG 0.659149 6.1:-78680168 MS.gene66375:CDS
GAAGACAAATGGGTTTGTGA+AGG 0.660526 6.1:-78680554 MS.gene66375:CDS
CTGGTGTAAAAGGAAGAACT+TGG 0.667237 6.1:-78679423 MS.gene66375:CDS
TACCTACAGTGGTAAAGCTG+CGG 0.678882 6.1:-78679616 MS.gene66375:CDS
GTCCGCAGCTTTACCACTGT+AGG 0.742193 6.1:+78679614 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATACTTAAAATATAACAA+AGG - chr6.1:78680803-78680822 MS.gene66375:intron 10.0%
!! CAAATTTATAATGTAAATAT+TGG + chr6.1:78680464-78680483 None:intergenic 10.0%
!! AAAAAAAGAAAAGCTAAATT+AGG + chr6.1:78680268-78680287 None:intergenic 15.0%
!! AAGTATTTAAATTAACATTC+AGG + chr6.1:78680791-78680810 None:intergenic 15.0%
!!! AGTTTCTGATTTTTTTAATA+CGG - chr6.1:78679702-78679721 MS.gene66375:intron 15.0%
!!! GTTATTTTTTGTATTTTATC+CGG + chr6.1:78680540-78680559 None:intergenic 15.0%
!! AATTTGTACTGTATGATATT+GGG - chr6.1:78681317-78681336 MS.gene66375:CDS 20.0%
!! TACCAAACAAAAAGAAAAAA+TGG + chr6.1:78681000-78681019 None:intergenic 20.0%
!! TGATAAAGAAAATAAGTGTA+TGG - chr6.1:78680050-78680069 MS.gene66375:intron 20.0%
!!! TAATTTGTACTGTATGATAT+TGG - chr6.1:78681316-78681335 MS.gene66375:CDS 20.0%
!!! TACCATTTTTTCTTTTTGTT+TGG - chr6.1:78680995-78681014 MS.gene66375:intron 20.0%
!!! TATGAAAATTCTTTCTTTTC+AGG - chr6.1:78680098-78680117 MS.gene66375:intron 20.0%
!!! TATGGTAGATTTTAATTTGA+AGG - chr6.1:78680068-78680087 MS.gene66375:intron 20.0%
!!! TGATAATGATATTAAGCTTT+TGG - chr6.1:78679786-78679805 MS.gene66375:intron 20.0%
!!! TTGTTTGTTAATGTGTTTTT+AGG - chr6.1:78681248-78681267 MS.gene66375:intron 20.0%
! AAAGAAATATTACATGAGCA+TGG + chr6.1:78680440-78680459 None:intergenic 25.0%
! AACATGATTAAACTATTCCA+AGG + chr6.1:78680618-78680637 None:intergenic 25.0%
! CAATCATCAAATTCGAAATT+AGG + chr6.1:78679638-78679657 None:intergenic 25.0%
! GAATTATTGTGATCTTTGAT+TGG - chr6.1:78679665-78679684 MS.gene66375:intron 25.0%
! TTGTATGTTATATATTCTGC+CGG - chr6.1:78680518-78680537 MS.gene66375:CDS 25.0%
!! ATTTTATCATAAACTCTGCA+TGG + chr6.1:78681047-78681066 None:intergenic 25.0%
!! TTGGAACTATTAAAGTTGAT+TGG - chr6.1:78680917-78680936 MS.gene66375:intron 25.0%
!!! CTAGTTTTTTCTTTCTTTCT+TGG - chr6.1:78680218-78680237 MS.gene66375:CDS 25.0%
!!! TGATTTTTTTAATACGGTAG+AGG - chr6.1:78679708-78679727 MS.gene66375:intron 25.0%
AAACAGTATGATGCTTCAAA+AGG + chr6.1:78680562-78680581 None:intergenic 30.0%
ACAATATCATCCAAGTAAAG+TGG + chr6.1:78680831-78680850 None:intergenic 30.0%
AGAAAAAGATGTATCCTAAG+CGG + chr6.1:78680865-78680884 None:intergenic 30.0%
ATATGATTGCACACAATGTT+TGG - chr6.1:78680898-78680917 MS.gene66375:intron 30.0%
ATGTAGAAGTTATCCAATTC+TGG + chr6.1:78680186-78680205 None:intergenic 30.0%
CAATACAGTACTTGAATATG+TGG - chr6.1:78680314-78680333 MS.gene66375:intron 30.0%
CAATTATTCAAACACTTGGA+AGG - chr6.1:78679812-78679831 MS.gene66375:intron 30.0%
CGAAATTAGGATTCACAATT+AGG + chr6.1:78679625-78679644 None:intergenic 30.0%
GAAGCAATTATTCAAACACT+TGG - chr6.1:78679808-78679827 MS.gene66375:intron 30.0%
TAACATAGTCAATCTGATTG+AGG - chr6.1:78680149-78680168 MS.gene66375:CDS 30.0%
TATGCTTGTGAAATGCATTT+GGG - chr6.1:78681192-78681211 MS.gene66375:intron 30.0%
TCAATCAGATTGACTATGTT+AGG + chr6.1:78680150-78680169 None:intergenic 30.0%
TGAATATGTGGAAGACAAAT+GGG - chr6.1:78680326-78680345 MS.gene66375:intron 30.0%
TGTAGAAGTTATCCAATTCT+GGG + chr6.1:78680185-78680204 None:intergenic 30.0%
TTAAGTCAATGTTGAGTTTC+AGG + chr6.1:78680958-78680977 None:intergenic 30.0%
TTATGCTTGTGAAATGCATT+TGG - chr6.1:78681191-78681210 MS.gene66375:intron 30.0%
TTGAATATGTGGAAGACAAA+TGG - chr6.1:78680325-78680344 MS.gene66375:intron 30.0%
! ACACAACTTTTGCATATCAA+TGG - chr6.1:78680491-78680510 MS.gene66375:CDS 30.0%
! TTGAAGCATCATACTGTTTA+TGG - chr6.1:78680563-78680582 MS.gene66375:CDS 30.0%
!! AGCTTTTCTTTTTTTGTCTG+AGG - chr6.1:78680273-78680292 MS.gene66375:intron 30.0%
!! TTCTGTGTTATTTAGTTCTC+TGG - chr6.1:78679993-78680012 MS.gene66375:intron 30.0%
AATTTGTGTGTGCGAAATGA+AGG - chr6.1:78680027-78680046 MS.gene66375:intron 35.0%
AGATTGACTATGTTAGGATG+TGG + chr6.1:78680144-78680163 None:intergenic 35.0%
CACCAACCTAAAATACATTC+AGG + chr6.1:78681163-78681182 None:intergenic 35.0%
CGAGTAATCAACAGATTATC+AGG + chr6.1:78680702-78680721 None:intergenic 35.0%
GTAACGCAGAATATAGTACA+TGG - chr6.1:78680666-78680685 MS.gene66375:intron 35.0%
TACTTGCGTGATATAGTTTG+TGG - chr6.1:78680402-78680421 MS.gene66375:intron 35.0%
TGTGAAATGCATTTGGGTAA+TGG - chr6.1:78681198-78681217 MS.gene66375:intron 35.0%
! AATCTGTTGATTACTCGTCA+TGG - chr6.1:78680705-78680724 MS.gene66375:intron 35.0%
! ACTGCACCTGAATGTATTTT+AGG - chr6.1:78681154-78681173 MS.gene66375:intron 35.0%
! CTGCAAAATGAAAAGCATAC+AGG + chr6.1:78681089-78681108 None:intergenic 35.0%
! CTGTATGCTTTTCATTTTGC+AGG - chr6.1:78681087-78681106 MS.gene66375:intron 35.0%
! TAAAAGGAAGAACTTGGTGA+AGG - chr6.1:78681473-78681492 MS.gene66375:CDS 35.0%
! TATAGGTCAACGAAGTATCT+TGG + chr6.1:78681518-78681537 None:intergenic 35.0%
!! AACAAAGGTACCACTTTACT+TGG - chr6.1:78680818-78680837 MS.gene66375:intron 35.0%
!! CACCTGAATGTATTTTAGGT+TGG - chr6.1:78681158-78681177 MS.gene66375:intron 35.0%
!! TTATTTAGTTCTCTGGTGCA+AGG - chr6.1:78680000-78680019 MS.gene66375:intron 35.0%
!!! CCAACGTCATTCTTTGTTTT+GGG + chr6.1:78681386-78681405 None:intergenic 35.0%
!!! TTTTTAGGTGTTACCTACAG+TGG - chr6.1:78681263-78681282 MS.gene66375:intron 35.0%
AGCTGGGTTATTGGAAATGA+TGG - chr6.1:78681423-78681442 MS.gene66375:CDS 40.0%
CCCAAAACAAAGAATGACGT+TGG - chr6.1:78681383-78681402 MS.gene66375:CDS 40.0%
CTCTTACTCGTTAAATGCCT+TGG - chr6.1:78680598-78680617 MS.gene66375:intron 40.0%
CTGGTGTAAAAGGAAGAACT+TGG - chr6.1:78681467-78681486 MS.gene66375:CDS 40.0%
CTTTCGTGTGAAGAAGCTTA+TGG + chr6.1:78679393-78679412 None:intergenic 40.0%
GCTGGGTTATTGGAAATGAT+GGG - chr6.1:78681424-78681443 MS.gene66375:CDS 40.0%
GTCATGGTACAGTGAAGATA+GGG - chr6.1:78680721-78680740 MS.gene66375:intron 40.0%
TCATGGTACAGTGAAGATAG+GGG - chr6.1:78680722-78680741 MS.gene66375:intron 40.0%
TCTGCATGGAGTATGTCAAA+GGG + chr6.1:78681033-78681052 None:intergenic 40.0%
! AAATGGGTTTGTGAAGGTTC+AGG - chr6.1:78680342-78680361 MS.gene66375:intron 40.0%
! GAAGACAAATGGGTTTGTGA+AGG - chr6.1:78680336-78680355 MS.gene66375:intron 40.0%
! TTGGGTGAATACCCTTTTCT+TGG - chr6.1:78681335-78681354 MS.gene66375:CDS 40.0%
!! AGAGGTGTTTGAGTTGCATA+TGG - chr6.1:78679726-78679745 MS.gene66375:intron 40.0%
!! GCCAACGTCATTCTTTGTTT+TGG + chr6.1:78681387-78681406 None:intergenic 40.0%
ACTTGTAGCGCGTAATTCAG+CGG + chr6.1:78679590-78679609 None:intergenic 45.0%
CAATTCCTTTGTACCTGTGC+TGG - chr6.1:78681448-78681467 MS.gene66375:CDS 45.0%
CAGCACAGGTACAAAGGAAT+TGG + chr6.1:78681450-78681469 None:intergenic 45.0%
CATTCAGGTGCAGTGAAAAC+AGG + chr6.1:78681148-78681167 None:intergenic 45.0%
CCCATGTGTCACCAAGAAAA+GGG + chr6.1:78681349-78681368 None:intergenic 45.0%
CGTCATGGTACAGTGAAGAT+AGG - chr6.1:78680720-78680739 MS.gene66375:intron 45.0%
CTCTGCATGGAGTATGTCAA+AGG + chr6.1:78681034-78681053 None:intergenic 45.0%
CTGCATGGAGTATGTCAAAG+GGG + chr6.1:78681032-78681051 None:intergenic 45.0%
TAATGGTGTCTACGATACGC+AGG - chr6.1:78681215-78681234 MS.gene66375:intron 45.0%
TACCTACAGTGGTAAAGCTG+CGG - chr6.1:78681274-78681293 MS.gene66375:intron 45.0%
TGCATGGAGTATGTCAAAGG+GGG + chr6.1:78681031-78681050 None:intergenic 45.0%
TTACACCAGCACAGGTACAA+AGG + chr6.1:78681456-78681475 None:intergenic 45.0%
! GGTGATTGATGACCCAGAAT+TGG - chr6.1:78680170-78680189 MS.gene66375:CDS 45.0%
! TCTTCCTTTTACACCAGCAC+AGG + chr6.1:78681464-78681483 None:intergenic 45.0%
! TGTACCTGTGCTGGTGTAAA+AGG - chr6.1:78681457-78681476 MS.gene66375:CDS 45.0%
! TGTATCTTCAACTGCCGCTT+AGG - chr6.1:78680848-78680867 MS.gene66375:intron 45.0%
!! ACCCTTTTCTTGGTGACACA+TGG - chr6.1:78681345-78681364 MS.gene66375:CDS 45.0%
!! ATCGAGGAGTTTGATAGTGC+GGG + chr6.1:78679470-78679489 None:intergenic 45.0%
!! CCCTTTTCTTGGTGACACAT+GGG - chr6.1:78681346-78681365 MS.gene66375:CDS 45.0%
!! GATCGAGGAGTTTGATAGTG+CGG + chr6.1:78679471-78679490 None:intergenic 45.0%
ATGGAGTATGTCAAAGGGGG+TGG + chr6.1:78681028-78681047 None:intergenic 50.0%
CCTAGCAGTCTCTTCACGTA+AGG + chr6.1:78680379-78680398 None:intergenic 50.0%
CCTTACGTGAAGAGACTGCT+AGG - chr6.1:78680376-78680395 MS.gene66375:intron 50.0%
GATATGCTTCGACGATCACC+TGG - chr6.1:78681118-78681137 MS.gene66375:intron 50.0%
GCAGCAGATAGCTGGGTTAT+TGG - chr6.1:78681414-78681433 MS.gene66375:CDS 50.0%
GCAGTGAAAACAGGAGTTCC+AGG + chr6.1:78681139-78681158 None:intergenic 50.0%
GCCCATGTGTCACCAAGAAA+AGG + chr6.1:78681350-78681369 None:intergenic 50.0%
GTTGCATTACCTCACAAGCC+TGG + chr6.1:78680761-78680780 None:intergenic 50.0%
TGATGTCGCAGCAGATAGCT+GGG - chr6.1:78681407-78681426 MS.gene66375:CDS 50.0%
TGGTAAAGCTGCGGACACAT+GGG - chr6.1:78681283-78681302 MS.gene66375:intron 50.0%
!! CGAGTTCTCGTTCTAAGGTG+TGG + chr6.1:78679501-78679520 None:intergenic 50.0%
AGGGGATTTCAGTGTCAGCC+AGG - chr6.1:78680740-78680759 MS.gene66375:intron 55.0%
CTGATGTCGCAGCAGATAGC+TGG - chr6.1:78681406-78681425 MS.gene66375:CDS 55.0%
GATAGTGCGGGCTTGATCGA+CGG + chr6.1:78679458-78679477 None:intergenic 55.0%
GTCCGCAGCTTTACCACTGT+AGG + chr6.1:78681279-78681298 None:intergenic 55.0%
GTGGTAAAGCTGCGGACACA+TGG - chr6.1:78681282-78681301 MS.gene66375:intron 55.0%
! CGCTTCGGCTTGTCGTTTCT+CGG + chr6.1:78679557-78679576 None:intergenic 55.0%
! GGCGTCGAGTTCTCGTTCTA+AGG + chr6.1:78679506-78679525 None:intergenic 55.0%
!! AGCGGCTTTCTGAGACGCTT+CGG + chr6.1:78679572-78679591 None:intergenic 55.0%
CAGTGTCAGCCAGGCTTGTG+AGG - chr6.1:78680749-78680768 MS.gene66375:intron 60.0%
GGCTTGATCGACGGCGAGAG+AGG + chr6.1:78679449-78679468 None:intergenic 65.0%
! AGGTGTGGACGCGCTGATCG+AGG + chr6.1:78679486-78679505 None:intergenic 65.0%
! GCTGCGGACACATGGGCTGT+AGG - chr6.1:78681290-78681309 MS.gene66375:intron 65.0%
CTCGGAACGAGCGCGAGCAG+CGG + chr6.1:78679539-78679558 None:intergenic 70.0%
AGCGCGAGCAGCGGCGGTGA+TGG + chr6.1:78679530-78679549 None:intergenic 75.0%
GGAACGAGCGCGAGCAGCGG+CGG + chr6.1:78679536-78679555 None:intergenic 75.0%
! GCGAGCAGCGGCGGTGATGG+CGG + chr6.1:78679527-78679546 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 78679367 78681545 78679367 ID=MS.gene66375
chr6.1 mRNA 78679367 78681545 78679367 ID=MS.gene66375.t1;Parent=MS.gene66375
chr6.1 exon 78681305 78681545 78681305 ID=MS.gene66375.t1.exon1;Parent=MS.gene66375.t1
chr6.1 CDS 78681305 78681545 78681305 ID=cds.MS.gene66375.t1;Parent=MS.gene66375.t1
chr6.1 exon 78680466 78680590 78680466 ID=MS.gene66375.t1.exon2;Parent=MS.gene66375.t1
chr6.1 CDS 78680466 78680590 78680466 ID=cds.MS.gene66375.t1;Parent=MS.gene66375.t1
chr6.1 exon 78680142 78680237 78680142 ID=MS.gene66375.t1.exon3;Parent=MS.gene66375.t1
chr6.1 CDS 78680142 78680237 78680142 ID=cds.MS.gene66375.t1;Parent=MS.gene66375.t1
chr6.1 exon 78679737 78679803 78679737 ID=MS.gene66375.t1.exon4;Parent=MS.gene66375.t1
chr6.1 CDS 78679737 78679803 78679737 ID=cds.MS.gene66375.t1;Parent=MS.gene66375.t1
chr6.1 exon 78679586 78679642 78679586 ID=MS.gene66375.t1.exon5;Parent=MS.gene66375.t1
chr6.1 CDS 78679586 78679642 78679586 ID=cds.MS.gene66375.t1;Parent=MS.gene66375.t1
chr6.1 exon 78679367 78679494 78679367 ID=MS.gene66375.t1.exon6;Parent=MS.gene66375.t1
chr6.1 CDS 78679367 78679494 78679367 ID=cds.MS.gene66375.t1;Parent=MS.gene66375.t1
Gene Sequence

>MS.gene66375

ATGAGTTCAAATCTCGAATCTCTCCATAAGCTTCTTCACACGAAAGCTGTTTTCGTCGAAGACGACACTTTCTCTAAAGCCTCTCTCGCCGTCGATCAAGCCCGCACTATCAAACTCCTCGATCAGCGCGTCCACACCTTAGAACGAGAACTCGACGCCGCCATCACCGCCGCTGCTCGCGCTCGTTCCGAGAAACGACAAGCCGAAGCGTCTCAGAAAGCCGCTGAATTACGCGCTACAAGTAAGTACTATTAACCTAATTGTGAATCCTAATTTCGAATTTGATGATTGTGAATTTGAATTATTGTGATCTTTGATTGGAGAAGTTAATTGATAGTTTCTGATTTTTTTAATACGGTAGAGGTGTTTGAGTTGCATATGGAAGAACTGCGTGCAAAGCAAGAAGAAATTACGAAGCGTGATAATGATATTAAGCTTTTGGAAGCAATTATTCAAACACTTGGAAGGAAAGAATGATTTACTACATCTCTGTAAAACACTAAAACTTGTTGTTCTTAGTTTCGTTAGTTTCTGTGTAAATTGAGTTGTTCTAGTTCTAGTAAGTAAAGATTTATTGTTATCTGAAACACTGTAATAAATTTGAATTTTTCTATAATGAATAATTTTTCTGTGTTATTTAGTTCTCTGGTGCAAGGATTAAATTTGTGTGTGCGAAATGAAGGTGATAAAGAAAATAAGTGTATGGTAGATTTTAATTTGAAGGTTTTCATTATGAAAATTCTTTCTTTTCAGGTTTTCATTATGAAAATGCTGCCACATCCTAACATAGTCAATCTGATTGAGGTGATTGATGACCCAGAATTGGATAACTTCTACATGAGTACTGATGACTAGTTTTTTCTTTCTTTCTTGGTTCATTATAAAAATGCTGCAACATCCTAATTTAGCTTTTCTTTTTTTGTCTGAGGCTTGACTATCTGATTTTTCAATACAGTACTTGAATATGTGGAAGACAAATGGGTTTGTGAAGGTTCAGGTCGAGCTTGTGCCTTACGTGAAGAGACTGCTAGGAGATACTTGCGTGATATAGTTTGTGGATTAATGTATCTCCATGCTCATGTAATATTTCTTTACCAATATTTACATTATAAATTTGTACACACACACAACTTTTGCATATCAATGGAAATTTGTATGTTATATATTCTGCCGGATAAAATACAAAAAATAACCTTTTGAAGCATCATACTGTTTATGGTAAATGCTCATACTCTTACTCGTTAAATGCCTTGGAATAGTTTAATCATGTTACTATAATGTTTAATTATATTTTTATTTGTAACGCAGAATATAGTACATGGAGATATCAAGCCTGATAATCTGTTGATTACTCGTCATGGTACAGTGAAGATAGGGGATTTCAGTGTCAGCCAGGCTTGTGAGGTAATGCAACTACTGAGCCTGAATGTTAATTTAAATACTTAAAATATAACAAAGGTACCACTTTACTTGGATGATATTGTATCTTCAACTGCCGCTTAGGATACATCTTTTTCTTTGTGATACTGCAATATGATTGCACACAATGTTTGGAACTATTAAAGTTGATTGGTGCACTCTGATAATACCTGAAACTCAACATTGACTTAATCAATTTGCAATATGATTACCATTTTTTCTTTTTGTTTGGTACATAGCCACCCCCTTTGACATACTCCATGCAGAGTTTATGATAAAATCTTATGACTTAATATGAAGCCTGTATGCTTTTCATTTTGCAGGATGATAATGATATGCTTCGACGATCACCTGGAACTCCTGTTTTCACTGCACCTGAATGTATTTTAGGTTGGTGTTTTCATTTTATGCTTGTGAAATGCATTTGGGTAATGGTGTCTACGATACGCAGGTTCTCACACTTTGTTTGTTAATGTGTTTTTAGGTGTTACCTACAGTGGTAAAGCTGCGGACACATGGGCTGTAGGAGTTAATTTGTACTGTATGATATTGGGTGAATACCCTTTTCTTGGTGACACATGGGCTATAAGATGCAGACCCAAAACAAAGAATGACGTTGGCTGATGTCGCAGCAGATAGCTGGGTTATTGGAAATGATGGGCCAATTCCTTTGTACCTGTGCTGGTGTAAAAGGAAGAACTTGGTGAAGGAAGACAGTGATGAGAGCAACCAAGATACTTCGTTGACCTATACTGACTGA
Protein sequence

>MS.gene66375.t1

MSSNLESLHKLLHTKAVFVEDDTFSKASLAVDQARTIKLLDQRVHTLERELDAAITAAARARSEKRQAEASQKAAELRATILEYVEDKWVCEGSGRACALREETARRYLRDIVCGLMYLHAHNIVHGDIKPDNLLITRHGTVKIGDFSVSQACEDDNDMLRRSPGTPVFTAPECILGVTYSGKAADTWAVGVNLYSDSWVIGNDGPIPLYLCWCKRKNLVKEDSDESNQDTSLTYTD