Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66553.t1 | XP_024632961.1 | 83.8 | 809 | 103 | 4 | 1 | 781 | 1 | 809 | 0.00E+00 | 1347 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66553.t1 | Q9SWG3 | 24.8 | 759 | 470 | 18 | 32 | 783 | 48 | 712 | 5.5e-54 | 214.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66553.t1 | D3YBB9 | 76.1 | 774 | 165 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1186.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene66553.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66553.t1 | MTR_0558s0020 | 86.486 | 296 | 39 | 1 | 1 | 295 | 1 | 296 | 0.0 | 538 |
MS.gene66553.t1 | MTR_1g083640 | 82.042 | 284 | 35 | 1 | 1 | 268 | 1 | 284 | 3.19e-168 | 487 |
MS.gene66553.t1 | MTR_8g446020 | 72.881 | 295 | 41 | 1 | 1 | 295 | 1 | 256 | 1.72e-148 | 435 |
MS.gene66553.t1 | MTR_2g014100 | 81.633 | 245 | 36 | 1 | 1 | 236 | 1 | 245 | 7.54e-140 | 413 |
MS.gene66553.t1 | MTR_6g090505 | 82.278 | 237 | 42 | 0 | 65 | 301 | 1 | 237 | 7.33e-138 | 412 |
MS.gene66553.t1 | MTR_6g090505 | 66.667 | 102 | 7 | 2 | 396 | 495 | 230 | 306 | 3.99e-33 | 132 |
MS.gene66553.t1 | MTR_6g090505 | 38.953 | 172 | 75 | 5 | 463 | 615 | 202 | 362 | 2.13e-12 | 70.1 |
MS.gene66553.t1 | MTR_0337s0040 | 71.538 | 260 | 34 | 2 | 1 | 259 | 1 | 221 | 8.79e-121 | 363 |
MS.gene66553.t1 | MTR_3g008240 | 83.744 | 203 | 32 | 1 | 1 | 202 | 1 | 203 | 5.92e-116 | 349 |
MS.gene66553.t1 | MTR_4g040430 | 82.178 | 202 | 32 | 1 | 1 | 202 | 1 | 198 | 2.63e-113 | 342 |
MS.gene66553.t1 | MTR_0337s0060 | 57.911 | 316 | 33 | 4 | 447 | 759 | 21 | 239 | 2.23e-106 | 326 |
MS.gene66553.t1 | MTR_3g028680 | 80.978 | 184 | 32 | 1 | 618 | 798 | 1 | 184 | 1.29e-100 | 309 |
MS.gene66553.t1 | MTR_2g067090 | 79.006 | 181 | 35 | 1 | 621 | 798 | 99 | 279 | 8.37e-92 | 290 |
MS.gene66553.t1 | MTR_5g071590 | 73.333 | 180 | 35 | 2 | 1 | 167 | 1 | 180 | 2.37e-87 | 274 |
MS.gene66553.t1 | MTR_1g055240 | 86.620 | 142 | 19 | 0 | 91 | 232 | 3 | 144 | 4.23e-84 | 265 |
MS.gene66553.t1 | MTR_0019s0290 | 80.263 | 152 | 30 | 0 | 82 | 233 | 9 | 160 | 1.16e-81 | 258 |
MS.gene66553.t1 | MTR_4g133495 | 62.983 | 181 | 41 | 2 | 576 | 753 | 88 | 245 | 4.60e-67 | 224 |
MS.gene66553.t1 | MTR_4g133340 | 62.983 | 181 | 41 | 2 | 576 | 753 | 88 | 245 | 4.60e-67 | 224 |
MS.gene66553.t1 | MTR_1281s0010 | 80.734 | 109 | 21 | 0 | 19 | 127 | 1 | 109 | 2.31e-56 | 189 |
MS.gene66553.t1 | MTR_6g051425 | 31.761 | 318 | 186 | 6 | 40 | 341 | 22 | 324 | 2.64e-39 | 149 |
MS.gene66553.t1 | MTR_2g067130 | 67.290 | 107 | 29 | 2 | 695 | 798 | 46 | 149 | 1.05e-36 | 135 |
MS.gene66553.t1 | MTR_4g008820 | 85.000 | 80 | 11 | 1 | 1 | 79 | 125 | 204 | 2.50e-32 | 134 |
MS.gene66553.t1 | MTR_8g046060 | 78.409 | 88 | 10 | 2 | 1 | 79 | 91 | 178 | 4.71e-32 | 124 |
MS.gene66553.t1 | MTR_1g070355 | 26.769 | 325 | 215 | 7 | 41 | 362 | 80 | 384 | 2.03e-19 | 93.2 |
MS.gene66553.t1 | MTR_4g035820 | 23.103 | 290 | 190 | 7 | 17 | 299 | 61 | 324 | 1.88e-14 | 77.8 |
MS.gene66553.t1 | MTR_0402s0040 | 24.865 | 185 | 120 | 4 | 49 | 233 | 40 | 205 | 4.26e-14 | 76.3 |
MS.gene66553.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.45e-13 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66553.t1 | AT4G38180 | 27.044 | 636 | 394 | 13 | 32 | 665 | 70 | 637 | 2.04e-65 | 233 |
MS.gene66553.t1 | AT4G15090 | 25.888 | 676 | 414 | 15 | 50 | 718 | 66 | 661 | 1.91e-60 | 219 |
MS.gene66553.t1 | AT4G15090 | 25.888 | 676 | 414 | 15 | 50 | 718 | 66 | 661 | 1.91e-60 | 219 |
MS.gene66553.t1 | AT4G15090 | 25.888 | 676 | 414 | 15 | 50 | 718 | 66 | 661 | 1.91e-60 | 219 |
MS.gene66553.t1 | AT4G15090 | 25.888 | 676 | 414 | 15 | 50 | 718 | 66 | 661 | 1.91e-60 | 219 |
MS.gene66553.t1 | AT4G15090 | 25.888 | 676 | 414 | 15 | 50 | 718 | 66 | 661 | 1.91e-60 | 219 |
MS.gene66553.t1 | AT2G27110 | 25.833 | 600 | 365 | 16 | 127 | 719 | 108 | 634 | 1.28e-51 | 194 |
MS.gene66553.t1 | AT2G27110 | 25.833 | 600 | 365 | 16 | 127 | 719 | 108 | 634 | 1.28e-51 | 194 |
MS.gene66553.t1 | AT2G27110 | 26.719 | 509 | 316 | 11 | 213 | 719 | 36 | 489 | 1.14e-50 | 190 |
MS.gene66553.t1 | AT3G06250 | 24.487 | 633 | 355 | 16 | 34 | 661 | 189 | 703 | 3.46e-50 | 189 |
MS.gene66553.t1 | AT3G06250 | 24.487 | 633 | 355 | 16 | 34 | 661 | 189 | 703 | 3.46e-50 | 189 |
MS.gene66553.t1 | AT3G06250 | 24.487 | 633 | 355 | 16 | 34 | 661 | 189 | 703 | 3.46e-50 | 189 |
MS.gene66553.t1 | AT1G76320 | 24.372 | 677 | 416 | 18 | 50 | 720 | 12 | 598 | 5.74e-50 | 187 |
MS.gene66553.t1 | AT1G76320 | 24.372 | 677 | 416 | 18 | 50 | 720 | 12 | 598 | 2.20e-49 | 186 |
MS.gene66553.t1 | AT1G76320 | 24.372 | 677 | 416 | 18 | 50 | 720 | 12 | 598 | 2.39e-49 | 186 |
MS.gene66553.t1 | AT1G76320 | 24.372 | 677 | 416 | 18 | 50 | 720 | 12 | 598 | 2.39e-49 | 186 |
MS.gene66553.t1 | AT3G22170 | 22.678 | 732 | 445 | 18 | 34 | 753 | 69 | 691 | 1.73e-46 | 179 |
MS.gene66553.t1 | AT3G22170 | 22.678 | 732 | 445 | 18 | 34 | 753 | 69 | 691 | 1.73e-46 | 179 |
MS.gene66553.t1 | AT5G18960 | 23.538 | 650 | 363 | 19 | 24 | 661 | 200 | 727 | 4.35e-44 | 171 |
MS.gene66553.t1 | AT5G18960 | 23.538 | 650 | 363 | 19 | 24 | 661 | 200 | 727 | 4.35e-44 | 171 |
MS.gene66553.t1 | AT4G38170 | 24.594 | 431 | 267 | 9 | 235 | 662 | 24 | 399 | 1.72e-42 | 163 |
MS.gene66553.t1 | AT1G10240 | 25.361 | 623 | 373 | 21 | 49 | 659 | 62 | 604 | 4.51e-42 | 164 |
MS.gene66553.t1 | AT1G10240 | 25.361 | 623 | 373 | 21 | 49 | 659 | 62 | 604 | 4.51e-42 | 164 |
MS.gene66553.t1 | AT5G28530 | 24.257 | 639 | 387 | 18 | 40 | 660 | 60 | 619 | 1.91e-41 | 162 |
MS.gene66553.t1 | AT2G32250 | 23.803 | 752 | 427 | 24 | 1 | 743 | 8 | 622 | 1.23e-40 | 160 |
MS.gene66553.t1 | AT5G28530 | 24.100 | 639 | 384 | 19 | 40 | 660 | 60 | 615 | 1.33e-40 | 159 |
MS.gene66553.t1 | AT5G28530 | 24.100 | 639 | 384 | 19 | 40 | 660 | 60 | 615 | 1.33e-40 | 159 |
MS.gene66553.t1 | AT2G32250 | 23.600 | 750 | 431 | 23 | 1 | 743 | 8 | 622 | 1.66e-40 | 160 |
MS.gene66553.t1 | AT2G32250 | 23.600 | 750 | 431 | 23 | 1 | 743 | 8 | 622 | 1.66e-40 | 160 |
MS.gene66553.t1 | AT2G32250 | 23.803 | 752 | 427 | 24 | 1 | 743 | 8 | 622 | 1.82e-40 | 160 |
MS.gene66553.t1 | AT2G32250 | 23.803 | 752 | 427 | 24 | 1 | 743 | 8 | 622 | 1.82e-40 | 160 |
MS.gene66553.t1 | AT2G32250 | 23.803 | 752 | 427 | 24 | 1 | 743 | 8 | 622 | 1.82e-40 | 160 |
MS.gene66553.t1 | AT2G32250 | 24.017 | 712 | 399 | 22 | 41 | 743 | 3 | 581 | 4.39e-40 | 159 |
MS.gene66553.t1 | AT2G32250 | 24.017 | 712 | 399 | 22 | 41 | 743 | 3 | 581 | 4.56e-40 | 159 |
MS.gene66553.t1 | AT1G80010 | 23.668 | 638 | 394 | 21 | 41 | 662 | 101 | 661 | 1.88e-35 | 144 |
MS.gene66553.t1 | AT1G52520 | 22.414 | 638 | 389 | 18 | 41 | 662 | 91 | 638 | 1.87e-32 | 135 |
MS.gene66553.t1 | AT4G19990 | 24.062 | 453 | 281 | 11 | 41 | 483 | 27 | 426 | 2.22e-27 | 119 |
MS.gene66553.t1 | AT4G19990 | 37.374 | 99 | 52 | 2 | 591 | 689 | 495 | 583 | 5.37e-12 | 70.1 |
MS.gene66553.t1 | AT4G19990 | 24.062 | 453 | 281 | 11 | 41 | 483 | 27 | 426 | 2.22e-27 | 119 |
MS.gene66553.t1 | AT4G19990 | 37.374 | 99 | 52 | 2 | 591 | 689 | 495 | 583 | 5.37e-12 | 70.1 |
MS.gene66553.t1 | AT4G19990 | 24.062 | 453 | 281 | 11 | 41 | 483 | 41 | 440 | 2.51e-27 | 119 |
MS.gene66553.t1 | AT4G19990 | 37.374 | 99 | 52 | 2 | 591 | 689 | 509 | 597 | 6.34e-12 | 69.7 |
MS.gene66553.t1 | AT4G19990 | 24.062 | 453 | 281 | 11 | 41 | 483 | 27 | 426 | 2.53e-27 | 119 |
MS.gene66553.t1 | AT4G19990 | 37.374 | 99 | 52 | 2 | 591 | 689 | 495 | 583 | 5.75e-12 | 70.1 |
MS.gene66553.t1 | AT4G19990 | 24.062 | 453 | 281 | 11 | 41 | 483 | 27 | 426 | 3.38e-27 | 119 |
MS.gene66553.t1 | AT4G19990 | 37.374 | 99 | 52 | 2 | 591 | 689 | 495 | 583 | 6.37e-12 | 69.7 |
MS.gene66553.t1 | AT4G19990 | 24.062 | 453 | 281 | 11 | 41 | 483 | 27 | 426 | 3.38e-27 | 119 |
MS.gene66553.t1 | AT4G19990 | 37.374 | 99 | 52 | 2 | 591 | 689 | 495 | 583 | 6.37e-12 | 69.7 |
MS.gene66553.t1 | AT4G19990 | 28.358 | 268 | 185 | 4 | 219 | 483 | 106 | 369 | 4.71e-26 | 114 |
MS.gene66553.t1 | AT4G19990 | 37.374 | 99 | 52 | 2 | 591 | 689 | 438 | 526 | 5.71e-12 | 69.7 |
MS.gene66553.t1 | AT5G28530 | 21.940 | 629 | 351 | 21 | 40 | 660 | 60 | 556 | 1.67e-22 | 103 |
MS.gene66553.t1 | AT5G28530 | 21.781 | 629 | 348 | 22 | 40 | 660 | 60 | 552 | 1.13e-21 | 100 |
Find 123 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTTCCTTCAAATACTATT+TGG | 0.137491 | 6.2:+62399155 | MS.gene66553:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 6.2:+62398717 | MS.gene66553:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 6.2:-62399852 | None:intergenic |
CTTTATTCATTTCAACATTA+TGG | 0.194287 | 6.2:+62398984 | MS.gene66553:CDS |
TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 6.2:+62398436 | MS.gene66553:intron |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 6.2:+62397912 | MS.gene66553:CDS |
TGTCTTTAGTGCCAACATTC+AGG | 0.270430 | 6.2:-62399575 | None:intergenic |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 6.2:+62398469 | MS.gene66553:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 6.2:-62398563 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 6.2:-62399846 | None:intergenic |
GGTTTCAAATGTTGATGTTT+TGG | 0.317051 | 6.2:+62399281 | MS.gene66553:CDS |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 6.2:+62398758 | MS.gene66553:CDS |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 6.2:-62398581 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 6.2:-62397962 | None:intergenic |
TTTGCTTCTTCCGAGCTATA+AGG | 0.345757 | 6.2:-62399914 | None:intergenic |
GAGGGATAATCATGCTGATT+TGG | 0.346844 | 6.2:+62399017 | MS.gene66553:CDS |
CTCAATGGTGTTCTTGAGGC+AGG | 0.359373 | 6.2:+62399690 | MS.gene66553:CDS |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 6.2:+62398858 | MS.gene66553:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 6.2:+62397969 | MS.gene66553:CDS |
TCATGCTGATTTGGACTTCA+AGG | 0.389304 | 6.2:+62399026 | MS.gene66553:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 6.2:+62397961 | MS.gene66553:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 6.2:+62398857 | MS.gene66553:CDS |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 6.2:-62397432 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 6.2:+62399838 | MS.gene66553:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 6.2:-62399828 | None:intergenic |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 6.2:+62399723 | MS.gene66553:CDS |
CCATGATTCTTTATCACTAA+AGG | 0.406174 | 6.2:-62397193 | None:intergenic |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 6.2:+62397203 | MS.gene66553:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 6.2:+62399406 | MS.gene66553:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 6.2:-62399329 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 6.2:+62397274 | MS.gene66553:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 6.2:+62399364 | MS.gene66553:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 6.2:-62399330 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 6.2:+62397609 | MS.gene66553:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 6.2:+62397491 | MS.gene66553:CDS |
TGAATGTCTATAAGATATAT+AGG | 0.445219 | 6.2:+62397523 | MS.gene66553:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 6.2:-62398574 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 6.2:+62397474 | MS.gene66553:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 6.2:-62399507 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 6.2:+62397357 | MS.gene66553:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 6.2:+62397639 | MS.gene66553:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 6.2:+62397128 | MS.gene66553:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 6.2:+62398648 | MS.gene66553:CDS |
CTCCTCCAAATAGTATTTGA+AGG | 0.453936 | 6.2:-62399160 | None:intergenic |
TTCCTTCAAATACTATTTGG+AGG | 0.455066 | 6.2:+62399158 | MS.gene66553:CDS |
TCAATTCCGAATGTTATTCA+AGG | 0.457718 | 6.2:+62398616 | MS.gene66553:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 6.2:+62399407 | MS.gene66553:CDS |
GGCCTACTTCAGACTTTAAG+TGG | 0.462107 | 6.2:+62398812 | MS.gene66553:CDS |
CGCAAACACGTGTAGAAAGC+TGG | 0.465682 | 6.2:-62399641 | None:intergenic |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 6.2:+62397323 | MS.gene66553:CDS |
GCTGTCTGTGAGCCATCTGT+TGG | 0.470881 | 6.2:+62399798 | MS.gene66553:CDS |
GTCTTTAGTGCCAACATTCA+GGG | 0.475268 | 6.2:-62399574 | None:intergenic |
CTGTCTGTGAGCCATCTGTT+GGG | 0.478819 | 6.2:+62399799 | MS.gene66553:CDS |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 6.2:-62397468 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 6.2:+62397261 | MS.gene66553:CDS |
TCTAATGACGACTCGTCAAA+AGG | 0.488508 | 6.2:+62397752 | MS.gene66553:CDS |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 6.2:+62397317 | MS.gene66553:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 6.2:-62398449 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 6.2:+62398759 | MS.gene66553:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 6.2:+62397765 | MS.gene66553:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 6.2:+62398998 | MS.gene66553:CDS |
TTGGAGGAGGACACAACAAA+AGG | 0.494180 | 6.2:+62399174 | MS.gene66553:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 6.2:-62399078 | None:intergenic |
AAAACACCTTGAATAACATT+CGG | 0.501511 | 6.2:-62398622 | None:intergenic |
TGAGGCAGGGAAAGAGGCAG+AGG | 0.502396 | 6.2:+62399704 | MS.gene66553:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 6.2:-62397857 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 6.2:+62398845 | MS.gene66553:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 6.2:+62399343 | MS.gene66553:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 6.2:-62397723 | None:intergenic |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 6.2:+62398863 | MS.gene66553:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 6.2:-62399323 | None:intergenic |
CCAAATAGTATTTGAAGGAA+AGG | 0.519540 | 6.2:-62399155 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.520639 | 6.2:-62398966 | None:intergenic |
AATGAAGCTTTCTCGAAACC+AGG | 0.524475 | 6.2:+62397819 | MS.gene66553:CDS |
AAATGCTCTGCTTTATGTAA+TGG | 0.525118 | 6.2:-62397567 | None:intergenic |
TGTTCTTGAGGCAGGGAAAG+AGG | 0.525999 | 6.2:+62399698 | MS.gene66553:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 6.2:+62399344 | MS.gene66553:CDS |
AACAGAAATTCCTTATAGCT+CGG | 0.527085 | 6.2:+62399904 | MS.gene66553:CDS |
CTGAAATCTACCCTGAATGT+TGG | 0.529139 | 6.2:+62399564 | MS.gene66553:CDS |
TGTCTATAAGATATATAGGT+GGG | 0.532209 | 6.2:+62397527 | MS.gene66553:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 6.2:+62397368 | MS.gene66553:CDS |
CTTCAAATACTATTTGGAGG+AGG | 0.540330 | 6.2:+62399161 | MS.gene66553:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 6.2:-62398961 | None:intergenic |
CCTTTAGTGATAAAGAATCA+TGG | 0.543522 | 6.2:+62397193 | MS.gene66553:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 6.2:+62397369 | MS.gene66553:CDS |
TGGAGGAGGACACAACAAAA+GGG | 0.550418 | 6.2:+62399175 | MS.gene66553:CDS |
GAGAACATCTTATGAAGTGA+TGG | 0.551307 | 6.2:+62397671 | MS.gene66553:CDS |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 6.2:-62398594 | None:intergenic |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 6.2:+62397152 | MS.gene66553:CDS |
GGGTGAAGGTGTTGGAGGCA+CGG | 0.565649 | 6.2:+62397692 | MS.gene66553:CDS |
GCATCTGAAATATTTCTCAA+TGG | 0.566996 | 6.2:+62399675 | MS.gene66553:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 6.2:+62399650 | MS.gene66553:CDS |
ATTTCTCAATGGTGTTCTTG+AGG | 0.572762 | 6.2:+62399686 | MS.gene66553:CDS |
TCAATGGTGTTCTTGAGGCA+GGG | 0.576112 | 6.2:+62399691 | MS.gene66553:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 6.2:-62399079 | None:intergenic |
GAAGCAAAAGAAAGATGATG+AGG | 0.585686 | 6.2:+62399929 | MS.gene66553:CDS |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 6.2:-62399100 | None:intergenic |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 6.2:+62398580 | MS.gene66553:CDS |
TTTGGTGCAGTCCCAACAGA+TGG | 0.595102 | 6.2:-62399810 | None:intergenic |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 6.2:-62399766 | None:intergenic |
TTGAAGGAAACCTTTCCCCA+AGG | 0.600566 | 6.2:+62399313 | MS.gene66553:CDS |
GAAGTGATGGGTGAAGGTGT+TGG | 0.603704 | 6.2:+62397684 | MS.gene66553:CDS |
GACGACTCGTCAAAAGGAGA+TGG | 0.604288 | 6.2:+62397758 | MS.gene66553:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 6.2:+62399653 | MS.gene66553:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 6.2:+62399076 | MS.gene66553:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.609132 | 6.2:+62399259 | MS.gene66553:CDS |
GACTCGTCAAAAGGAGATGG+TGG | 0.611157 | 6.2:+62397761 | MS.gene66553:CDS |
ATATCAACTTCATCTGAGAG+TGG | 0.614980 | 6.2:+62397117 | MS.gene66553:CDS |
AGCCACTTAAAGTCTGAAGT+AGG | 0.617789 | 6.2:-62398814 | None:intergenic |
TGTTGATAATGATAATGAGA+GGG | 0.618346 | 6.2:+62399260 | MS.gene66553:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 6.2:-62397417 | None:intergenic |
GTGATGGGTGAAGGTGTTGG+AGG | 0.621481 | 6.2:+62397687 | MS.gene66553:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 6.2:-62399328 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 6.2:+62398649 | MS.gene66553:CDS |
GATTTCAGATTATCGACAGA+CGG | 0.641548 | 6.2:-62399549 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.643044 | 6.2:+62397672 | MS.gene66553:CDS |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 6.2:+62398999 | MS.gene66553:CDS |
ATGTCTATAAGATATATAGG+TGG | 0.643489 | 6.2:+62397526 | MS.gene66553:CDS |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 6.2:-62399120 | None:intergenic |
TCTTATGAAGTGATGGGTGA+AGG | 0.656961 | 6.2:+62397678 | MS.gene66553:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 6.2:-62399425 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.671057 | 6.2:+62398576 | MS.gene66553:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 6.2:+62399408 | MS.gene66553:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr6.2:62397317-62397336 | MS.gene66553:CDS | 20.0% |
!! | CTTTATTCATTTCAACATTA+TGG | + | chr6.2:62398984-62399003 | MS.gene66553:CDS | 20.0% |
!! | TGAATGTCTATAAGATATAT+AGG | + | chr6.2:62397523-62397542 | MS.gene66553:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | + | chr6.2:62397261-62397280 | MS.gene66553:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+TGG | + | chr6.2:62398144-62398163 | MS.gene66553:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr6.2:62398787-62398806 | MS.gene66553:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr6.2:62398116-62398135 | MS.gene66553:intron | 20.0% |
! | AAAACACCTTGAATAACATT+CGG | - | chr6.2:62398625-62398644 | None:intergenic | 25.0% |
! | AAAGTGATTATGAAAAAGCT+AGG | + | chr6.2:62399877-62399896 | MS.gene66553:CDS | 25.0% |
! | AAGTGATTATGAAAAAGCTA+GGG | + | chr6.2:62399878-62399897 | MS.gene66553:CDS | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr6.2:62397323-62397342 | MS.gene66553:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr6.2:62397961-62397980 | MS.gene66553:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr6.2:62397987-62398006 | None:intergenic | 25.0% |
! | ATGTCTATAAGATATATAGG+TGG | + | chr6.2:62397526-62397545 | MS.gene66553:CDS | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | + | chr6.2:62397152-62397171 | MS.gene66553:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr6.2:62398034-62398053 | MS.gene66553:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr6.2:62399123-62399142 | None:intergenic | 25.0% |
! | TGTCTATAAGATATATAGGT+GGG | + | chr6.2:62397527-62397546 | MS.gene66553:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr6.2:62398717-62398736 | MS.gene66553:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr6.2:62398136-62398155 | MS.gene66553:intron | 25.0% |
!! | CAAAGTTTTTACAATTGAGA+AGG | + | chr6.2:62399218-62399237 | MS.gene66553:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr6.2:62398407-62398426 | MS.gene66553:intron | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | + | chr6.2:62397874-62397893 | MS.gene66553:CDS | 25.0% |
!!! | AGACATAGCTAGTATTTTTT+GGG | + | chr6.2:62397875-62397894 | MS.gene66553:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr6.2:62399259-62399278 | MS.gene66553:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr6.2:62397313-62397332 | None:intergenic | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr6.2:62397639-62397658 | MS.gene66553:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr6.2:62398791-62398810 | MS.gene66553:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr6.2:62399260-62399279 | MS.gene66553:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr6.2:62398207-62398226 | None:intergenic | 30.0% | |
AAATGCTCTGCTTTATGTAA+TGG | - | chr6.2:62397570-62397589 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr6.2:62397369-62397388 | MS.gene66553:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr6.2:62397969-62397988 | MS.gene66553:CDS | 30.0% | |
AACAGAAATTCCTTATAGCT+CGG | + | chr6.2:62399904-62399923 | MS.gene66553:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr6.2:62399838-62399857 | MS.gene66553:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr6.2:62398758-62398777 | MS.gene66553:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | + | chr6.2:62397672-62397691 | MS.gene66553:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr6.2:62398759-62398778 | MS.gene66553:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr6.2:62398452-62398471 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr6.2:62399331-62399350 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr6.2:62397912-62397931 | MS.gene66553:CDS | 30.0% | |
CACAAATTCTAAGTCAAGAT+AGG | - | chr6.2:62398174-62398193 | None:intergenic | 30.0% | |
CCAAATAGTATTTGAAGGAA+AGG | - | chr6.2:62399158-62399177 | None:intergenic | 30.0% | |
CCATGATTCTTTATCACTAA+AGG | - | chr6.2:62397196-62397215 | None:intergenic | 30.0% | |
CCTTTAGTGATAAAGAATCA+TGG | + | chr6.2:62397193-62397212 | MS.gene66553:CDS | 30.0% | |
CCTTTCCTTCAAATACTATT+TGG | + | chr6.2:62399155-62399174 | MS.gene66553:CDS | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr6.2:62398073-62398092 | MS.gene66553:intron | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr6.2:62398673-62398692 | MS.gene66553:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr6.2:62399332-62399351 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr6.2:62397965-62397984 | None:intergenic | 30.0% | |
GTTTGCTTAATCCTAAAAAC+AGG | + | chr6.2:62397394-62397413 | MS.gene66553:CDS | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr6.2:62397458-62397477 | MS.gene66553:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | + | chr6.2:62397203-62397222 | MS.gene66553:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr6.2:62398969-62398988 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr6.2:62397368-62397387 | MS.gene66553:CDS | 30.0% | |
TCAATTCCGAATGTTATTCA+AGG | + | chr6.2:62398616-62398635 | MS.gene66553:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr6.2:62397840-62397859 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr6.2:62399103-62399122 | None:intergenic | 30.0% | |
TTCCTTCAAATACTATTTGG+AGG | + | chr6.2:62399158-62399177 | MS.gene66553:CDS | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr6.2:62399849-62399868 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr6.2:62397726-62397745 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCTCAA+TGG | + | chr6.2:62398366-62398385 | MS.gene66553:intron | 30.0% | |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr6.2:62397491-62397510 | MS.gene66553:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr6.2:62397716-62397735 | MS.gene66553:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+TGG | + | chr6.2:62399675-62399694 | MS.gene66553:CDS | 30.0% |
! | GGTTTCAAATGTTGATGTTT+TGG | + | chr6.2:62399281-62399300 | MS.gene66553:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr6.2:62398566-62398585 | None:intergenic | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr6.2:62399831-62399850 | None:intergenic | 30.0% |
!! | AGACATCAACTACTTTTGAT+TGG | + | chr6.2:62398512-62398531 | MS.gene66553:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr6.2:62399343-62399362 | MS.gene66553:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr6.2:62398048-62398067 | MS.gene66553:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr6.2:62399723-62399742 | MS.gene66553:CDS | 30.0% |
!! | GTTATTCAAGGTGTTTTTCA+TGG | + | chr6.2:62398628-62398647 | MS.gene66553:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr6.2:62399344-62399363 | MS.gene66553:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr6.2:62399440-62399459 | MS.gene66553:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr6.2:62399508-62399527 | MS.gene66553:CDS | 30.0% |
!!! | TTCAAGATTTTGGAGTTCTT+AGG | + | chr6.2:62399450-62399469 | MS.gene66553:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr6.2:62398998-62399017 | MS.gene66553:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | + | chr6.2:62397274-62397293 | MS.gene66553:CDS | 35.0% | |
ATATCAACTTCATCTGAGAG+TGG | + | chr6.2:62397117-62397136 | MS.gene66553:CDS | 35.0% | |
ATTTCTCAATGGTGTTCTTG+AGG | + | chr6.2:62399686-62399705 | MS.gene66553:CDS | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr6.2:62398999-62399018 | MS.gene66553:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr6.2:62397609-62397628 | MS.gene66553:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr6.2:62399333-62399352 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | + | chr6.2:62397357-62397376 | MS.gene66553:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr6.2:62397457-62397476 | MS.gene66553:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr6.2:62398845-62398864 | MS.gene66553:CDS | 35.0% | |
CTCCTCCAAATAGTATTTGA+AGG | - | chr6.2:62399163-62399182 | None:intergenic | 35.0% | |
CTTCAAATACTATTTGGAGG+AGG | + | chr6.2:62399161-62399180 | MS.gene66553:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr6.2:62397452-62397471 | MS.gene66553:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr6.2:62399929-62399948 | MS.gene66553:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr6.2:62397671-62397690 | MS.gene66553:CDS | 35.0% | |
GATTTCAGATTATCGACAGA+CGG | - | chr6.2:62399552-62399571 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr6.2:62397435-62397454 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr6.2:62398469-62398488 | MS.gene66553:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr6.2:62398928-62398947 | MS.gene66553:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr6.2:62398641-62398660 | MS.gene66553:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr6.2:62399777-62399796 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr6.2:62399510-62399529 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr6.2:62398858-62398877 | MS.gene66553:CDS | 35.0% |
!!! | AAGATTTTGGAGTTCTTAGG+TGG | + | chr6.2:62399453-62399472 | MS.gene66553:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr6.2:62399511-62399530 | MS.gene66553:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr6.2:62398964-62398983 | None:intergenic | 40.0% | |
AATGAAGCTTTCTCGAAACC+AGG | + | chr6.2:62397819-62397838 | MS.gene66553:CDS | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr6.2:62398305-62398324 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr6.2:62399855-62399874 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | + | chr6.2:62397128-62397147 | MS.gene66553:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr6.2:62399407-62399426 | MS.gene66553:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr6.2:62399406-62399425 | MS.gene66553:CDS | 40.0% | |
CTGAAATCTACCCTGAATGT+TGG | + | chr6.2:62399564-62399583 | MS.gene66553:CDS | 40.0% | |
GTCTTTAGTGCCAACATTCA+GGG | - | chr6.2:62399577-62399596 | None:intergenic | 40.0% | |
TACATTTCAGCTGCCTTTCT+TGG | + | chr6.2:62398436-62398455 | MS.gene66553:intron | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr6.2:62398576-62398595 | MS.gene66553:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr6.2:62398301-62398320 | MS.gene66553:intron | 40.0% | |
TCTAATGACGACTCGTCAAA+AGG | + | chr6.2:62397752-62397771 | MS.gene66553:CDS | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr6.2:62398577-62398596 | None:intergenic | 40.0% | |
TGTCTTTAGTGCCAACATTC+AGG | - | chr6.2:62399578-62399597 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr6.2:62399917-62399936 | None:intergenic | 40.0% | |
! | AGCCACTTAAAGTCTGAAGT+AGG | - | chr6.2:62398817-62398836 | None:intergenic | 40.0% |
! | GAGGGATAATCATGCTGATT+TGG | + | chr6.2:62399017-62399036 | MS.gene66553:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr6.2:62399769-62399788 | None:intergenic | 40.0% |
! | TGGTTTAGAATTGAAGGCTC+TGG | + | chr6.2:62398054-62398073 | MS.gene66553:intron | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr6.2:62398857-62398876 | MS.gene66553:CDS | 40.0% |
!! | GTTTTGGATGCAGAACTTGA+AGG | + | chr6.2:62399297-62399316 | MS.gene66553:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr6.2:62397408-62397427 | None:intergenic | 40.0% |
!! | TCATGCTGATTTGGACTTCA+AGG | + | chr6.2:62399026-62399045 | MS.gene66553:CDS | 40.0% |
!! | TCTTATGAAGTGATGGGTGA+AGG | + | chr6.2:62397678-62397697 | MS.gene66553:CDS | 40.0% |
!!! | GCTAGTATTTTTTGGGCAGA+TGG | + | chr6.2:62397882-62397901 | MS.gene66553:CDS | 40.0% |
AGAACTGGACTGTCACATGT+TGG | - | chr6.2:62397420-62397439 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr6.2:62399076-62399095 | MS.gene66553:CDS | 45.0% | |
ATTTGTGCTCTGTACAGCCA+TGG | + | chr6.2:62398187-62398206 | MS.gene66553:intron | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr6.2:62399428-62399447 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr6.2:62397462-62397481 | MS.gene66553:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr6.2:62399326-62399345 | None:intergenic | 45.0% | |
GGCCTACTTCAGACTTTAAG+TGG | + | chr6.2:62398812-62398831 | MS.gene66553:CDS | 45.0% | |
TCAATGGTGTTCTTGAGGCA+GGG | + | chr6.2:62399691-62399710 | MS.gene66553:CDS | 45.0% | |
TGGAGGAGGACACAACAAAA+GGG | + | chr6.2:62399175-62399194 | MS.gene66553:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr6.2:62399408-62399427 | MS.gene66553:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr6.2:62397860-62397879 | None:intergenic | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr6.2:62397471-62397490 | None:intergenic | 45.0% | |
TTGAAGGAAACCTTTCCCCA+AGG | + | chr6.2:62399313-62399332 | MS.gene66553:CDS | 45.0% | |
TTGGAGGAGGACACAACAAA+AGG | + | chr6.2:62399174-62399193 | MS.gene66553:CDS | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr6.2:62398880-62398899 | MS.gene66553:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr6.2:62398863-62398882 | MS.gene66553:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr6.2:62397474-62397493 | MS.gene66553:CDS | 45.0% |
ACCAGCCTGGTCTGTGTATA+TGG | - | chr6.2:62398584-62398603 | None:intergenic | 50.0% | |
ACCATATACACAGACCAGGC+TGG | + | chr6.2:62398580-62398599 | MS.gene66553:CDS | 50.0% | |
CGCAAACACGTGTAGAAAGC+TGG | - | chr6.2:62399644-62399663 | None:intergenic | 50.0% | |
CTCAATGGTGTTCTTGAGGC+AGG | + | chr6.2:62399690-62399709 | MS.gene66553:CDS | 50.0% | |
CTGTCTGTGAGCCATCTGTT+GGG | + | chr6.2:62399799-62399818 | MS.gene66553:CDS | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr6.2:62399081-62399100 | None:intergenic | 50.0% | |
GACGACTCGTCAAAAGGAGA+TGG | + | chr6.2:62397758-62397777 | MS.gene66553:CDS | 50.0% | |
GACTCGTCAAAAGGAGATGG+TGG | + | chr6.2:62397761-62397780 | MS.gene66553:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr6.2:62399364-62399383 | MS.gene66553:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr6.2:62398649-62398668 | MS.gene66553:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr6.2:62399650-62399669 | MS.gene66553:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr6.2:62398648-62398667 | MS.gene66553:CDS | 50.0% | |
TGTTCTTGAGGCAGGGAAAG+AGG | + | chr6.2:62399698-62399717 | MS.gene66553:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr6.2:62399813-62399832 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTGAAGGTGT+TGG | + | chr6.2:62397684-62397703 | MS.gene66553:CDS | 50.0% |
ACTTCAACAACGCACCAGCC+TGG | - | chr6.2:62398597-62398616 | None:intergenic | 55.0% | |
GCTGTCTGTGAGCCATCTGT+TGG | + | chr6.2:62399798-62399817 | MS.gene66553:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr6.2:62399082-62399101 | None:intergenic | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr6.2:62397765-62397784 | MS.gene66553:CDS | 55.0% |
!! | GTGATGGGTGAAGGTGTTGG+AGG | + | chr6.2:62397687-62397706 | MS.gene66553:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr6.2:62399653-62399672 | MS.gene66553:CDS | 60.0% | |
TGAGGCAGGGAAAGAGGCAG+AGG | + | chr6.2:62399704-62399723 | MS.gene66553:CDS | 60.0% | |
!! | GGGTGAAGGTGTTGGAGGCA+CGG | + | chr6.2:62397692-62397711 | MS.gene66553:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 62397108 | 62399965 | 62397108 | ID=MS.gene66553 |
chr6.2 | mRNA | 62397108 | 62399965 | 62397108 | ID=MS.gene66553.t1;Parent=MS.gene66553 |
chr6.2 | exon | 62397108 | 62397990 | 62397108 | ID=MS.gene66553.t1.exon1;Parent=MS.gene66553.t1 |
chr6.2 | CDS | 62397108 | 62397990 | 62397108 | ID=cds.MS.gene66553.t1;Parent=MS.gene66553.t1 |
chr6.2 | exon | 62398446 | 62399965 | 62398446 | ID=MS.gene66553.t1.exon2;Parent=MS.gene66553.t1 |
chr6.2 | CDS | 62398446 | 62399965 | 62398446 | ID=cds.MS.gene66553.t1;Parent=MS.gene66553.t1 |
Gene Sequence |
Protein sequence |