Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66904.t1 | RHN74120.1 | 97.8 | 504 | 8 | 1 | 1 | 504 | 1 | 501 | 6.90E-272 | 946 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66904.t1 | Q8S4W7 | 45.8 | 570 | 222 | 10 | 8 | 499 | 26 | 586 | 5.2e-127 | 456.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66904.t1 | A0A396J7P5 | 97.8 | 504 | 8 | 1 | 1 | 504 | 1 | 501 | 5.0e-272 | 946.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene66904.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66904.t1 | MTR_3g065980 | 46.939 | 539 | 211 | 12 | 16 | 490 | 13 | 540 | 7.53e-159 | 462 |
MS.gene66904.t1 | MTR_7g027190 | 42.105 | 399 | 190 | 9 | 118 | 490 | 290 | 673 | 8.95e-92 | 294 |
MS.gene66904.t1 | MTR_4g133660 | 32.952 | 437 | 272 | 10 | 67 | 489 | 113 | 542 | 5.00e-68 | 228 |
MS.gene66904.t1 | MTR_2g082090 | 36.232 | 414 | 232 | 11 | 100 | 489 | 173 | 578 | 2.23e-67 | 227 |
MS.gene66904.t1 | MTR_8g442410 | 35.661 | 401 | 214 | 13 | 120 | 494 | 147 | 529 | 4.27e-66 | 223 |
MS.gene66904.t1 | MTR_4g102790 | 35.641 | 390 | 221 | 9 | 122 | 492 | 286 | 664 | 9.40e-66 | 225 |
MS.gene66904.t1 | MTR_5g094450 | 36.020 | 397 | 217 | 13 | 117 | 490 | 150 | 532 | 3.66e-65 | 220 |
MS.gene66904.t1 | MTR_3g056110 | 38.035 | 397 | 205 | 14 | 117 | 490 | 164 | 542 | 1.12e-64 | 219 |
MS.gene66904.t1 | MTR_1g029420 | 37.067 | 375 | 219 | 10 | 127 | 490 | 224 | 592 | 4.09e-64 | 219 |
MS.gene66904.t1 | MTR_5g097480 | 36.340 | 388 | 216 | 12 | 121 | 490 | 170 | 544 | 4.16e-64 | 218 |
MS.gene66904.t1 | MTR_7g074650 | 37.366 | 372 | 199 | 11 | 132 | 490 | 442 | 792 | 1.16e-62 | 219 |
MS.gene66904.t1 | MTR_3g089055 | 32.632 | 475 | 274 | 16 | 38 | 490 | 120 | 570 | 1.80e-62 | 214 |
MS.gene66904.t1 | MTR_3g089055 | 32.632 | 475 | 274 | 16 | 38 | 490 | 115 | 565 | 1.95e-62 | 214 |
MS.gene66904.t1 | MTR_4g104020 | 34.568 | 405 | 216 | 14 | 118 | 491 | 135 | 521 | 4.25e-60 | 206 |
MS.gene66904.t1 | MTR_2g026250 | 29.607 | 483 | 310 | 13 | 25 | 491 | 129 | 597 | 9.88e-58 | 202 |
MS.gene66904.t1 | MTR_3g022830 | 30.952 | 420 | 223 | 9 | 129 | 490 | 26 | 436 | 4.66e-56 | 193 |
MS.gene66904.t1 | MTR_1g096030 | 31.490 | 416 | 231 | 16 | 112 | 492 | 65 | 461 | 1.38e-53 | 187 |
MS.gene66904.t1 | MTR_2g097410 | 32.199 | 382 | 239 | 8 | 122 | 489 | 365 | 740 | 1.11e-51 | 187 |
MS.gene66904.t1 | MTR_4g076020 | 34.121 | 381 | 202 | 13 | 131 | 495 | 87 | 434 | 1.51e-51 | 181 |
MS.gene66904.t1 | MTR_4g064160 | 33.245 | 379 | 235 | 8 | 123 | 489 | 311 | 683 | 2.93e-50 | 182 |
MS.gene66904.t1 | MTR_4g064180 | 29.504 | 383 | 252 | 5 | 119 | 487 | 245 | 623 | 3.15e-49 | 179 |
MS.gene66904.t1 | MTR_4g076140 | 29.705 | 441 | 233 | 14 | 119 | 491 | 39 | 470 | 8.67e-49 | 175 |
MS.gene66904.t1 | MTR_3g072710 | 33.333 | 399 | 230 | 12 | 118 | 489 | 110 | 499 | 5.59e-48 | 173 |
MS.gene66904.t1 | MTR_4g064150 | 30.412 | 388 | 248 | 7 | 118 | 489 | 351 | 732 | 5.61e-48 | 177 |
MS.gene66904.t1 | MTR_1g069725 | 31.701 | 388 | 225 | 11 | 118 | 489 | 99 | 462 | 9.16e-48 | 172 |
MS.gene66904.t1 | MTR_4g064120 | 29.243 | 383 | 253 | 5 | 119 | 487 | 245 | 623 | 1.17e-47 | 174 |
MS.gene66904.t1 | MTR_2g097310 | 32.199 | 382 | 239 | 8 | 120 | 489 | 264 | 637 | 1.76e-47 | 174 |
MS.gene66904.t1 | MTR_5g009080 | 28.764 | 445 | 233 | 11 | 119 | 491 | 47 | 479 | 1.08e-46 | 169 |
MS.gene66904.t1 | MTR_4g077760 | 30.638 | 470 | 269 | 18 | 58 | 490 | 106 | 555 | 2.01e-46 | 170 |
MS.gene66904.t1 | MTR_7g062120 | 30.628 | 382 | 243 | 8 | 123 | 490 | 367 | 740 | 4.93e-45 | 169 |
MS.gene66904.t1 | MTR_2g097467 | 30.576 | 399 | 257 | 12 | 101 | 489 | 265 | 653 | 5.80e-45 | 167 |
MS.gene66904.t1 | MTR_5g058860 | 32.518 | 409 | 241 | 14 | 110 | 492 | 100 | 499 | 6.63e-45 | 165 |
MS.gene66904.t1 | MTR_2g034250 | 29.545 | 396 | 250 | 8 | 118 | 492 | 200 | 587 | 7.08e-45 | 166 |
MS.gene66904.t1 | MTR_4g064200 | 31.854 | 383 | 237 | 12 | 121 | 489 | 277 | 649 | 2.32e-44 | 166 |
MS.gene66904.t1 | MTR_2g097390 | 29.724 | 471 | 296 | 14 | 33 | 489 | 191 | 640 | 3.23e-44 | 165 |
MS.gene66904.t1 | MTR_2g097350 | 31.070 | 383 | 242 | 10 | 120 | 489 | 266 | 639 | 4.29e-44 | 165 |
MS.gene66904.t1 | MTR_2g097380 | 33.433 | 335 | 190 | 9 | 160 | 489 | 254 | 560 | 9.91e-44 | 162 |
MS.gene66904.t1 | MTR_2g034260 | 28.101 | 395 | 256 | 8 | 118 | 492 | 200 | 586 | 1.57e-43 | 162 |
MS.gene66904.t1 | MTR_2g097473 | 29.723 | 397 | 255 | 11 | 105 | 489 | 269 | 653 | 7.80e-43 | 161 |
MS.gene66904.t1 | MTR_2g097463 | 30.179 | 391 | 252 | 11 | 111 | 489 | 273 | 654 | 1.51e-42 | 160 |
MS.gene66904.t1 | MTR_0092s0100 | 31.842 | 380 | 225 | 9 | 125 | 490 | 369 | 728 | 4.08e-40 | 154 |
MS.gene66904.t1 | MTR_0092s0100 | 31.842 | 380 | 225 | 9 | 125 | 490 | 372 | 731 | 4.73e-40 | 154 |
MS.gene66904.t1 | MTR_2g034280 | 27.157 | 394 | 259 | 9 | 118 | 492 | 193 | 577 | 5.17e-40 | 152 |
MS.gene66904.t1 | MTR_8g093070 | 31.088 | 386 | 219 | 15 | 125 | 489 | 136 | 495 | 5.23e-40 | 151 |
MS.gene66904.t1 | MTR_5g015490 | 29.086 | 361 | 235 | 6 | 151 | 490 | 130 | 490 | 5.80e-38 | 145 |
MS.gene66904.t1 | MTR_4g097080 | 27.671 | 365 | 232 | 11 | 148 | 490 | 149 | 503 | 1.56e-37 | 144 |
MS.gene66904.t1 | MTR_6g047750 | 27.720 | 386 | 240 | 9 | 127 | 490 | 294 | 662 | 1.07e-34 | 138 |
MS.gene66904.t1 | MTR_7g109580 | 27.877 | 391 | 249 | 11 | 118 | 490 | 179 | 554 | 3.02e-34 | 136 |
MS.gene66904.t1 | MTR_1g086970 | 27.136 | 398 | 250 | 11 | 118 | 490 | 96 | 478 | 5.36e-33 | 131 |
MS.gene66904.t1 | MTR_7g057230 | 32.646 | 291 | 179 | 9 | 208 | 489 | 374 | 656 | 2.31e-32 | 131 |
MS.gene66904.t1 | MTR_4g026485 | 27.068 | 399 | 256 | 13 | 109 | 491 | 246 | 625 | 2.55e-32 | 131 |
MS.gene66904.t1 | MTR_5g015950 | 26.253 | 419 | 246 | 13 | 127 | 489 | 34 | 445 | 1.30e-31 | 127 |
MS.gene66904.t1 | MTR_3g053270 | 26.253 | 419 | 246 | 13 | 127 | 489 | 34 | 445 | 1.30e-31 | 127 |
MS.gene66904.t1 | MTR_4g095500 | 24.897 | 486 | 274 | 17 | 76 | 489 | 1 | 467 | 5.63e-30 | 122 |
MS.gene66904.t1 | MTR_2g099110 | 25.852 | 352 | 224 | 8 | 166 | 490 | 110 | 451 | 9.10e-28 | 115 |
MS.gene66904.t1 | MTR_8g077940 | 26.842 | 380 | 247 | 9 | 125 | 490 | 179 | 541 | 1.16e-26 | 113 |
MS.gene66904.t1 | MTR_2g089100 | 23.367 | 398 | 262 | 11 | 128 | 489 | 52 | 442 | 1.32e-25 | 109 |
MS.gene66904.t1 | MTR_8g020840 | 27.157 | 313 | 192 | 9 | 201 | 490 | 249 | 548 | 4.39e-22 | 100 |
MS.gene66904.t1 | MTR_3g022005 | 34.211 | 114 | 63 | 2 | 388 | 490 | 13 | 125 | 2.13e-12 | 64.7 |
MS.gene66904.t1 | MTR_3g022580 | 35.714 | 112 | 66 | 3 | 383 | 490 | 74 | 183 | 1.30e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66904.t1 | AT1G14920 | 48.544 | 515 | 213 | 11 | 16 | 490 | 27 | 529 | 1.34e-160 | 466 |
MS.gene66904.t1 | AT3G03450 | 47.750 | 511 | 217 | 12 | 19 | 490 | 46 | 545 | 5.68e-151 | 442 |
MS.gene66904.t1 | AT1G66350 | 49.393 | 494 | 213 | 15 | 16 | 490 | 31 | 506 | 7.25e-148 | 433 |
MS.gene66904.t1 | AT5G17490 | 45.968 | 496 | 237 | 11 | 15 | 490 | 32 | 516 | 4.69e-143 | 421 |
MS.gene66904.t1 | AT2G01570 | 54.922 | 386 | 162 | 6 | 109 | 490 | 204 | 581 | 3.72e-142 | 421 |
MS.gene66904.t1 | AT2G01570 | 53.846 | 65 | 29 | 1 | 17 | 80 | 44 | 108 | 4.20e-13 | 72.0 |
MS.gene66904.t1 | AT1G50600 | 35.750 | 400 | 236 | 8 | 104 | 490 | 135 | 526 | 3.33e-66 | 223 |
MS.gene66904.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 115 | 490 | 109 | 490 | 3.47e-66 | 222 |
MS.gene66904.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 115 | 490 | 109 | 490 | 3.47e-66 | 222 |
MS.gene66904.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 115 | 490 | 109 | 490 | 3.47e-66 | 222 |
MS.gene66904.t1 | AT5G48150 | 36.456 | 395 | 219 | 9 | 115 | 490 | 109 | 490 | 3.47e-66 | 222 |
MS.gene66904.t1 | AT2G04890 | 36.364 | 385 | 221 | 8 | 117 | 490 | 42 | 413 | 7.61e-66 | 219 |
MS.gene66904.t1 | AT1G50600 | 35.750 | 400 | 236 | 8 | 104 | 490 | 206 | 597 | 1.06e-65 | 223 |
MS.gene66904.t1 | AT1G50600 | 35.750 | 400 | 236 | 8 | 104 | 490 | 210 | 601 | 1.19e-65 | 223 |
MS.gene66904.t1 | AT5G41920 | 35.696 | 395 | 219 | 13 | 116 | 494 | 29 | 404 | 8.87e-63 | 210 |
MS.gene66904.t1 | AT1G21450 | 34.236 | 406 | 246 | 9 | 101 | 490 | 193 | 593 | 4.70e-60 | 208 |
MS.gene66904.t1 | AT3G54220 | 35.215 | 372 | 210 | 9 | 131 | 489 | 296 | 649 | 1.97e-59 | 207 |
MS.gene66904.t1 | AT1G63100 | 34.606 | 393 | 220 | 10 | 123 | 489 | 247 | 628 | 3.15e-58 | 204 |
MS.gene66904.t1 | AT1G63100 | 34.606 | 393 | 220 | 10 | 123 | 489 | 272 | 653 | 5.50e-58 | 204 |
MS.gene66904.t1 | AT1G50420 | 31.390 | 446 | 218 | 11 | 119 | 490 | 48 | 479 | 1.98e-57 | 198 |
MS.gene66904.t1 | AT4G17230 | 35.219 | 389 | 221 | 12 | 123 | 493 | 153 | 528 | 2.27e-55 | 194 |
MS.gene66904.t1 | AT4G17230 | 35.219 | 389 | 221 | 12 | 123 | 493 | 153 | 528 | 2.27e-55 | 194 |
MS.gene66904.t1 | AT1G07530 | 32.570 | 393 | 245 | 9 | 110 | 489 | 379 | 764 | 8.32e-49 | 179 |
MS.gene66904.t1 | AT1G55580 | 36.184 | 304 | 169 | 8 | 203 | 490 | 151 | 445 | 1.07e-48 | 174 |
MS.gene66904.t1 | AT5G66770 | 33.148 | 359 | 215 | 10 | 149 | 490 | 234 | 584 | 9.37e-48 | 174 |
MS.gene66904.t1 | AT5G59450 | 29.574 | 399 | 256 | 9 | 109 | 490 | 208 | 598 | 3.83e-47 | 173 |
MS.gene66904.t1 | AT3G46600 | 29.602 | 402 | 264 | 9 | 101 | 490 | 153 | 547 | 8.68e-47 | 171 |
MS.gene66904.t1 | AT3G46600 | 29.602 | 402 | 264 | 9 | 101 | 490 | 185 | 579 | 1.44e-46 | 171 |
MS.gene66904.t1 | AT3G46600 | 30.423 | 378 | 244 | 9 | 125 | 490 | 1 | 371 | 7.36e-46 | 164 |
MS.gene66904.t1 | AT2G29060 | 30.729 | 384 | 245 | 10 | 125 | 494 | 281 | 657 | 1.03e-43 | 164 |
MS.gene66904.t1 | AT3G50650 | 33.721 | 344 | 201 | 8 | 164 | 490 | 209 | 542 | 1.12e-43 | 162 |
MS.gene66904.t1 | AT2G29060 | 30.729 | 384 | 245 | 10 | 125 | 494 | 318 | 694 | 2.00e-43 | 164 |
MS.gene66904.t1 | AT2G29065 | 27.089 | 395 | 246 | 9 | 123 | 489 | 247 | 627 | 6.70e-39 | 150 |
MS.gene66904.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 118 | 489 | 144 | 528 | 3.90e-38 | 147 |
MS.gene66904.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 118 | 489 | 144 | 528 | 3.90e-38 | 147 |
MS.gene66904.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 118 | 489 | 309 | 693 | 5.45e-38 | 148 |
MS.gene66904.t1 | AT1G07520 | 27.750 | 400 | 246 | 12 | 118 | 489 | 308 | 692 | 5.47e-38 | 148 |
MS.gene66904.t1 | AT4G08250 | 29.108 | 426 | 263 | 18 | 93 | 489 | 61 | 476 | 6.73e-38 | 145 |
MS.gene66904.t1 | AT2G37650 | 28.052 | 385 | 247 | 10 | 123 | 490 | 330 | 701 | 2.81e-36 | 143 |
MS.gene66904.t1 | AT2G37650 | 27.792 | 385 | 248 | 10 | 123 | 490 | 342 | 713 | 3.04e-36 | 143 |
MS.gene66904.t1 | AT5G52510 | 29.565 | 345 | 215 | 9 | 166 | 490 | 304 | 640 | 1.22e-35 | 140 |
MS.gene66904.t1 | AT4G00150 | 27.960 | 397 | 248 | 12 | 103 | 490 | 187 | 554 | 2.09e-34 | 136 |
MS.gene66904.t1 | AT4G37650 | 27.882 | 373 | 229 | 11 | 152 | 490 | 163 | 529 | 8.81e-33 | 131 |
MS.gene66904.t1 | AT2G45160 | 29.558 | 362 | 216 | 11 | 152 | 490 | 294 | 639 | 9.63e-32 | 129 |
MS.gene66904.t1 | AT3G49950 | 27.551 | 392 | 250 | 14 | 127 | 494 | 29 | 410 | 2.36e-29 | 120 |
MS.gene66904.t1 | AT3G60630 | 28.758 | 306 | 192 | 9 | 198 | 490 | 330 | 622 | 4.79e-29 | 121 |
MS.gene66904.t1 | AT4G36710 | 26.873 | 387 | 251 | 10 | 119 | 490 | 116 | 485 | 1.61e-27 | 115 |
MS.gene66904.t1 | AT3G13840 | 25.309 | 324 | 198 | 11 | 185 | 490 | 213 | 510 | 1.07e-16 | 83.2 |
Find 136 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATAACGAGAACGGGTTTA+TGG | 0.172499 | 2.3:+37144797 | MS.gene66904:CDS |
TTCGGGTATTGAAATGGTTT+TGG | 0.204240 | 2.3:+37144719 | MS.gene66904:CDS |
CGGGTTCAGACCGTTGCATT+TGG | 0.261310 | 2.3:+37145013 | MS.gene66904:CDS |
CCATAAACCCGTTCTCGTTA+TGG | 0.276597 | 2.3:-37144797 | None:intergenic |
CCGGCCTTTGATTGCGGCTT+CGG | 0.318572 | 2.3:+37145139 | MS.gene66904:CDS |
TCAATACCCGAATGAGAATT+CGG | 0.329389 | 2.3:-37144708 | None:intergenic |
TTTCAGCTTCATCGTCTTCT+CGG | 0.339157 | 2.3:+37144672 | MS.gene66904:CDS |
CGGCATTGGTCCGCCGTCGC+TGG | 0.354188 | 2.3:+37144485 | MS.gene66904:CDS |
CCTCCGTTTCTCCGGCTTAC+CGG | 0.355777 | 2.3:+37144465 | MS.gene66904:CDS |
CGCGACAACCTCCGTGAAAT+CGG | 0.356894 | 2.3:+37144513 | MS.gene66904:CDS |
CTTTGATTGCGGCTTCGGCT+TGG | 0.374762 | 2.3:+37145144 | MS.gene66904:CDS |
ATCCTTCCGACATTGGCAAT+TGG | 0.377083 | 2.3:+37143890 | MS.gene66904:CDS |
TCCTTCCGACATTGGCAATT+GGG | 0.389374 | 2.3:+37143891 | MS.gene66904:CDS |
GAATCAAGGGAGCTTGACTT+TGG | 0.395394 | 2.3:+37145106 | MS.gene66904:CDS |
TTCTCATTCGGGTATTGAAA+TGG | 0.397931 | 2.3:+37144713 | MS.gene66904:CDS |
GGGTTCAGACCGTTGCATTT+GGG | 0.405803 | 2.3:+37145014 | MS.gene66904:CDS |
TTTCTCCGGCTTACCGGCAT+TGG | 0.406008 | 2.3:+37144471 | MS.gene66904:CDS |
TGACTCGCTTGAAGCGTGTC+CGG | 0.418691 | 2.3:+37144860 | MS.gene66904:CDS |
GCTTTGAACCGTCGCATCTT+CGG | 0.420783 | 2.3:+37144219 | MS.gene66904:CDS |
TTCGAGTATAGCTTGATTTG+CGG | 0.426009 | 2.3:-37144340 | None:intergenic |
CGTGGTGTGCTGCGAGGGAC+CGG | 0.428279 | 2.3:+37144935 | MS.gene66904:CDS |
AACGTTAGATTCGCCTTTCG+CGG | 0.429000 | 2.3:+37144567 | MS.gene66904:CDS |
CCACGCCGCAACGCCGCGAA+AGG | 0.429090 | 2.3:-37144580 | None:intergenic |
GTTAACGGAGCGTGCAAGTT+CGG | 0.429377 | 2.3:-37144547 | None:intergenic |
AATCAAGGGAGCTTGACTTT+GGG | 0.434762 | 2.3:+37145107 | MS.gene66904:CDS |
AGAGGCCGTGTGGTCAAATT+CGG | 0.437374 | 2.3:-37143929 | None:intergenic |
TGACTTTGGGTTGGCATAGC+CGG | 0.439605 | 2.3:+37145120 | MS.gene66904:CDS |
CGGGTTTATGGAACGGTTCA+CGG | 0.439903 | 2.3:+37144809 | MS.gene66904:CDS |
TGGTGGTGGTGTTGTGGCGG+CGG | 0.441542 | 2.3:-37143991 | None:intergenic |
CAAGCTCTTGCTCTTCGTCC+TGG | 0.444577 | 2.3:+37144438 | MS.gene66904:CDS |
CGGTGAAGTGTGCGAATTTG+AGG | 0.451224 | 2.3:-37144320 | None:intergenic |
AAGAAGATTGGTGGTGGTGG+TGG | 0.451641 | 2.3:-37144011 | None:intergenic |
CGACATTTCTCAATTTGCTT+CGG | 0.452551 | 2.3:+37143852 | MS.gene66904:CDS |
ATCCGACCCGAATTCTCATT+CGG | 0.456753 | 2.3:+37144701 | MS.gene66904:CDS |
CAATACCCGAATGAGAATTC+GGG | 0.457985 | 2.3:-37144707 | None:intergenic |
ATCTCGGCCATAGCTTTATC+CGG | 0.466984 | 2.3:-37144888 | None:intergenic |
TCCGACCCGAATTCTCATTC+GGG | 0.467756 | 2.3:+37144702 | MS.gene66904:CDS |
ATAGCTTTATCCGGTTCAAC+CGG | 0.472673 | 2.3:-37144879 | None:intergenic |
AAGCGAACCATAACGAGAAC+GGG | 0.473338 | 2.3:+37144790 | MS.gene66904:CDS |
TGAAGCGTGTCCGGTTGAAC+CGG | 0.475946 | 2.3:+37144869 | MS.gene66904:CDS |
CAGCGACGGCGGACCAATGC+CGG | 0.478193 | 2.3:-37144484 | None:intergenic |
TGTGAAGCCATGGATGCTTC+AGG | 0.479263 | 2.3:+37144614 | MS.gene66904:CDS |
GACATGAACCGTTGGTTAAG+TGG | 0.479723 | 2.3:+37144970 | MS.gene66904:CDS |
AAGGAGCGGCTCGGTAAAGC+CGG | 0.483410 | 2.3:+37144993 | MS.gene66904:CDS |
GGCGGCGGTGCTGAGAGATC+TGG | 0.490802 | 2.3:-37143976 | None:intergenic |
CCTTTCGCGGCGTTGCGGCG+TGG | 0.496391 | 2.3:+37144580 | MS.gene66904:CDS |
CGGAGAAACGGAGGTCCGCC+AGG | 0.496483 | 2.3:-37144456 | None:intergenic |
CGTGGTAATCTTCCATTGGC+TGG | 0.502641 | 2.3:+37144111 | MS.gene66904:CDS |
TATTAACTGTCGAAGAAGAT+TGG | 0.503596 | 2.3:-37144023 | None:intergenic |
CACTATGATCCTTCCGACAT+TGG | 0.504873 | 2.3:+37143883 | MS.gene66904:CDS |
TTCGCGGCGTTGCGGCGTGG+CGG | 0.506872 | 2.3:+37144583 | MS.gene66904:CDS |
CGAGACGGAGTCCGATTTCA+CGG | 0.506903 | 2.3:-37144524 | None:intergenic |
CTCTCTTTGTAAATACATCT+CGG | 0.511803 | 2.3:-37144904 | None:intergenic |
CAAAGCGTCGATGAAGTATC+CGG | 0.512312 | 2.3:-37144202 | None:intergenic |
CTGGCGGACCTCCGTTTCTC+CGG | 0.512726 | 2.3:+37144457 | MS.gene66904:CDS |
GCGGACCAATGCCGGTAAGC+CGG | 0.513787 | 2.3:-37144476 | None:intergenic |
ACCTCATGCATGGTCTTCAA+TGG | 0.514040 | 2.3:+37144403 | MS.gene66904:CDS |
GCAAACATGAACACCATCTC+CGG | 0.518130 | 2.3:+37144165 | MS.gene66904:CDS |
GAACTCACCTGAAGCATCCA+TGG | 0.518449 | 2.3:-37144621 | None:intergenic |
GCATAGCCGGCCTTTGATTG+CGG | 0.520541 | 2.3:+37145133 | MS.gene66904:CDS |
ATTCGCCTTTCGCGGCGTTG+CGG | 0.526404 | 2.3:+37144575 | MS.gene66904:CDS |
CAAGCCGAAGCCGCAATCAA+AGG | 0.528493 | 2.3:-37145143 | None:intergenic |
AAGGGAGCTTGACTTTGGGT+TGG | 0.530891 | 2.3:+37145111 | MS.gene66904:CDS |
TCGTTAATCGAAGGCATGCA+AGG | 0.531649 | 2.3:+37144135 | MS.gene66904:CDS |
CCGAAGCCGCAATCAAAGGC+CGG | 0.539000 | 2.3:-37145139 | None:intergenic |
CGCTCCTTCCACTTAACCAA+CGG | 0.539436 | 2.3:-37144978 | None:intergenic |
TGGTGGTGGTGGTGTTGTGG+CGG | 0.541506 | 2.3:-37143994 | None:intergenic |
ATGAACACCATCTCCGGCAT+CGG | 0.542138 | 2.3:+37144171 | MS.gene66904:CDS |
ATGCCGGTAAGCCGGAGAAA+CGG | 0.543739 | 2.3:-37144468 | None:intergenic |
CGTTCTCGTAAAGAGAAACT+TGG | 0.543788 | 2.3:-37144260 | None:intergenic |
TCGATTAACGAGCCAGCCAA+TGG | 0.545335 | 2.3:-37144123 | None:intergenic |
CAAATGCAACGGTCTGAACC+CGG | 0.552323 | 2.3:-37145012 | None:intergenic |
GCAACGTGGTAATCTTCCAT+TGG | 0.552649 | 2.3:+37144107 | MS.gene66904:CDS |
AGAGAAATCGTAGGGTAAAG+AGG | 0.554274 | 2.3:-37143947 | None:intergenic |
TCTGACTTTGTAGCCGACAT+TGG | 0.557024 | 2.3:-37143761 | None:intergenic |
TGGAAGATTACCACGTTGCA+CGG | 0.558728 | 2.3:-37144103 | None:intergenic |
ATTGATTTCAACCTCATGCA+TGG | 0.563574 | 2.3:+37144393 | MS.gene66904:CDS |
AAAGGCGAATCTAACGTTAA+CGG | 0.563777 | 2.3:-37144562 | None:intergenic |
AGGAGCGGCTCGGTAAAGCC+GGG | 0.565092 | 2.3:+37144994 | MS.gene66904:CDS |
TCATGTCTCTCAACTCGAGC+CGG | 0.568274 | 2.3:-37144954 | None:intergenic |
TATTGCGTGGAAGAGAATCA+AGG | 0.570726 | 2.3:+37145092 | MS.gene66904:CDS |
GACAAGCTTCGTAGTAGTGA+TGG | 0.571422 | 2.3:-37144293 | None:intergenic |
GTCCACCCAATTGCCAATGT+CGG | 0.572700 | 2.3:-37143896 | None:intergenic |
TCCGGCATCGGAAAAGTCGC+CGG | 0.573578 | 2.3:+37144183 | MS.gene66904:CDS |
AGCGTGCAAGTTCGGCGAGA+CGG | 0.577401 | 2.3:-37144539 | None:intergenic |
TTCCGACATTGGCAATTGGG+TGG | 0.578970 | 2.3:+37143894 | MS.gene66904:CDS |
GAAGCGAACCATAACGAGAA+CGG | 0.581490 | 2.3:+37144789 | MS.gene66904:CDS |
ACCCAATTGCCAATGTCGGA+AGG | 0.591475 | 2.3:-37143892 | None:intergenic |
TGCAACGTGGTGTGCTGCGA+GGG | 0.592419 | 2.3:+37144930 | MS.gene66904:CDS |
AAGTGTGCGAATTTGAGGTA+TGG | 0.594726 | 2.3:-37144315 | None:intergenic |
GGTTGAACCGGATAAAGCTA+TGG | 0.595176 | 2.3:+37144881 | MS.gene66904:CDS |
GACGGCCTCCTCGCCAATGT+CGG | 0.595479 | 2.3:+37143748 | MS.gene66904:CDS |
TCTCGTAAAGAGAAACTTGG+TGG | 0.598426 | 2.3:-37144257 | None:intergenic |
TCGAAGAAGATTGGTGGTGG+TGG | 0.598533 | 2.3:-37144014 | None:intergenic |
GGAAGTTCAGAGAAATCGTA+GGG | 0.603775 | 2.3:-37143955 | None:intergenic |
GCTCTTGCTCTTCGTCCTGG+CGG | 0.606990 | 2.3:+37144441 | MS.gene66904:CDS |
TAACTGTCGAAGAAGATTGG+TGG | 0.611571 | 2.3:-37144020 | None:intergenic |
TGGAAGTTCAGAGAAATCGT+AGG | 0.615760 | 2.3:-37143956 | None:intergenic |
CGTTAATCGAAGGCATGCAA+GGG | 0.622830 | 2.3:+37144136 | MS.gene66904:CDS |
TGAACCGTTGGTTAAGTGGA+AGG | 0.623165 | 2.3:+37144974 | MS.gene66904:CDS |
ACGAGAACGGGTTTATGGAA+CGG | 0.624479 | 2.3:+37144802 | MS.gene66904:CDS |
CTTTGTAGCCGACATTGGCG+AGG | 0.624493 | 2.3:-37143756 | None:intergenic |
GCTATACTCGAAGCTTTCAA+CGG | 0.625134 | 2.3:+37144351 | MS.gene66904:CDS |
CAATGACGTGGACACAATCG+TGG | 0.629821 | 2.3:-37144374 | None:intergenic |
TTGTCGCGGTCATCCAGCGA+CGG | 0.630447 | 2.3:-37144498 | None:intergenic |
CGATTTCACGGAGGTTGTCG+CGG | 0.631524 | 2.3:-37144512 | None:intergenic |
GTTAAGTGGAAGGAGCGGCT+CGG | 0.631755 | 2.3:+37144984 | MS.gene66904:CDS |
TTGGCTGGCTCGTTAATCGA+AGG | 0.631890 | 2.3:+37144126 | MS.gene66904:CDS |
TTCAGCGGAGGGTTATTGCG+TGG | 0.637968 | 2.3:+37145079 | MS.gene66904:CDS |
TCGCGGTCATCCAGCGACGG+CGG | 0.638615 | 2.3:-37144495 | None:intergenic |
TGTAGCCGACATTGGCGAGG+AGG | 0.639345 | 2.3:-37143753 | None:intergenic |
ATTGCGTGGAAGAGAATCAA+GGG | 0.640198 | 2.3:+37145093 | MS.gene66904:CDS |
AGTTGAGAGACATGAACCGT+TGG | 0.643232 | 2.3:+37144962 | MS.gene66904:CDS |
GCATTCGAACCCAAATGCAA+CGG | 0.649133 | 2.3:-37145023 | None:intergenic |
GCAAGAGCTTGAATTAACGC+TGG | 0.649987 | 2.3:-37144426 | None:intergenic |
CAATGTCGGAAGGATCATAG+TGG | 0.653849 | 2.3:-37143882 | None:intergenic |
GGTGAGTTCTAAAGAAGCTG+TGG | 0.654073 | 2.3:+37144635 | MS.gene66904:CDS |
GGCTTGAAGATGTGAAGCCA+TGG | 0.656305 | 2.3:+37144604 | MS.gene66904:CDS |
GAGTTCTAAAGAAGCTGTGG+CGG | 0.658727 | 2.3:+37144638 | MS.gene66904:CDS |
CGTTGGTTAAGTGGAAGGAG+CGG | 0.660011 | 2.3:+37144979 | MS.gene66904:CDS |
CTGCACAGTTCATCAGCATG+TGG | 0.661847 | 2.3:-37144077 | None:intergenic |
TCAAAGACAAAAGACATCGA+CGG | 0.665997 | 2.3:+37143730 | MS.gene66904:CDS |
CTGTCGAAGAAGATTGGTGG+TGG | 0.666801 | 2.3:-37144017 | None:intergenic |
CCGGTAAGCCGGAGAAACGG+AGG | 0.669681 | 2.3:-37144465 | None:intergenic |
CCTCTCCGAATTTGACCACA+CGG | 0.676826 | 2.3:+37143924 | MS.gene66904:CDS |
AGTGTTTCAGCATCTAACAA+AGG | 0.702442 | 2.3:-37145176 | None:intergenic |
CGTAGGGTAAAGAGGCCGTG+TGG | 0.707233 | 2.3:-37143939 | None:intergenic |
GCCATTGAAGACCATGCATG+AGG | 0.712810 | 2.3:-37144404 | None:intergenic |
ACCCGAATGAGAATTCGGGT+CGG | 0.713077 | 2.3:-37144703 | None:intergenic |
CCGTGTGGTCAAATTCGGAG+AGG | 0.714620 | 2.3:-37143924 | None:intergenic |
ATGCAACGTGGTGTGCTGCG+AGG | 0.715668 | 2.3:+37144929 | MS.gene66904:CDS |
TGAGGTTGAAATCAATGACG+TGG | 0.716676 | 2.3:-37144386 | None:intergenic |
TGTGCAGATTCCGTGCAACG+TGG | 0.753527 | 2.3:+37144093 | MS.gene66904:CDS |
GACGGAGTCCGATTTCACGG+AGG | 0.757121 | 2.3:-37144521 | None:intergenic |
GTTTATGGAACGGTTCACGG+AGG | 0.758651 | 2.3:+37144812 | MS.gene66904:CDS |
ACAAAGAGAGATATGCAACG+TGG | 0.806079 | 2.3:+37144917 | MS.gene66904:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
CTCTCTTTGTAAATACATCT+CGG | - | chr2.3:37144907-37144926 | None:intergenic | 30.0% | |
TATTAACTGTCGAAGAAGAT+TGG | - | chr2.3:37144026-37144045 | None:intergenic | 30.0% | |
! | TCAACAACTGTAACGATTTT+CGG | - | chr2.3:37144765-37144784 | None:intergenic | 30.0% |
AAAGGCGAATCTAACGTTAA+CGG | - | chr2.3:37144565-37144584 | None:intergenic | 35.0% | |
AGTGTTTCAGCATCTAACAA+AGG | - | chr2.3:37145179-37145198 | None:intergenic | 35.0% | |
TCAAAGACAAAAGACATCGA+CGG | + | chr2.3:37143730-37143749 | MS.gene66904:CDS | 35.0% | |
TCAATACCCGAATGAGAATT+CGG | - | chr2.3:37144711-37144730 | None:intergenic | 35.0% | |
! | ATTGATTTCAACCTCATGCA+TGG | + | chr2.3:37144393-37144412 | MS.gene66904:CDS | 35.0% |
! | CGACATTTCTCAATTTGCTT+CGG | + | chr2.3:37143852-37143871 | MS.gene66904:CDS | 35.0% |
! | CGATGTCTTTTGTCTTTGAT+GGG | - | chr2.3:37143729-37143748 | None:intergenic | 35.0% |
! | GATGTCTTTTGTCTTTGATG+GGG | - | chr2.3:37143728-37143747 | None:intergenic | 35.0% |
! | TCGATGTCTTTTGTCTTTGA+TGG | - | chr2.3:37143730-37143749 | None:intergenic | 35.0% |
! | TTCGAGTATAGCTTGATTTG+CGG | - | chr2.3:37144343-37144362 | None:intergenic | 35.0% |
!! | TTCTCATTCGGGTATTGAAA+TGG | + | chr2.3:37144713-37144732 | MS.gene66904:CDS | 35.0% |
!!! | GTATTGAAATGGTTTTGGGT+TGG | + | chr2.3:37144724-37144743 | MS.gene66904:CDS | 35.0% |
!!! | TCGGGTATTGAAATGGTTTT+GGG | + | chr2.3:37144720-37144739 | MS.gene66904:CDS | 35.0% |
!!! | TTCGGGTATTGAAATGGTTT+TGG | + | chr2.3:37144719-37144738 | MS.gene66904:CDS | 35.0% |
AATCAAGGGAGCTTGACTTT+GGG | + | chr2.3:37145107-37145126 | MS.gene66904:CDS | 40.0% | |
ACAAAGAGAGATATGCAACG+TGG | + | chr2.3:37144917-37144936 | MS.gene66904:CDS | 40.0% | |
AGAGAAATCGTAGGGTAAAG+AGG | - | chr2.3:37143950-37143969 | None:intergenic | 40.0% | |
ATTGCGTGGAAGAGAATCAA+GGG | + | chr2.3:37145093-37145112 | MS.gene66904:CDS | 40.0% | |
CAATACCCGAATGAGAATTC+GGG | - | chr2.3:37144710-37144729 | None:intergenic | 40.0% | |
CGTTCTCGTAAAGAGAAACT+TGG | - | chr2.3:37144263-37144282 | None:intergenic | 40.0% | |
GCTATACTCGAAGCTTTCAA+CGG | + | chr2.3:37144351-37144370 | MS.gene66904:CDS | 40.0% | |
GGAAGTTCAGAGAAATCGTA+GGG | - | chr2.3:37143958-37143977 | None:intergenic | 40.0% | |
TAACTGTCGAAGAAGATTGG+TGG | - | chr2.3:37144023-37144042 | None:intergenic | 40.0% | |
TATTGCGTGGAAGAGAATCA+AGG | + | chr2.3:37145092-37145111 | MS.gene66904:CDS | 40.0% | |
TCTCGTAAAGAGAAACTTGG+TGG | - | chr2.3:37144260-37144279 | None:intergenic | 40.0% | |
TGAGGTTGAAATCAATGACG+TGG | - | chr2.3:37144389-37144408 | None:intergenic | 40.0% | |
TGGAAGTTCAGAGAAATCGT+AGG | - | chr2.3:37143959-37143978 | None:intergenic | 40.0% | |
TTTCAGCTTCATCGTCTTCT+CGG | + | chr2.3:37144672-37144691 | MS.gene66904:CDS | 40.0% | |
! | AAGTGTGCGAATTTGAGGTA+TGG | - | chr2.3:37144318-37144337 | None:intergenic | 40.0% |
! | CGATTTTCGGATTCAAACTC+CGG | - | chr2.3:37144752-37144771 | None:intergenic | 40.0% |
!! | ATAGCTTTATCCGGTTCAAC+CGG | - | chr2.3:37144882-37144901 | None:intergenic | 40.0% |
!!! | AAATGGTTTTGGGTTGGATC+CGG | + | chr2.3:37144730-37144749 | MS.gene66904:CDS | 40.0% |
!!! | GTTGTTGACTCTGTTTTCAG+CGG | + | chr2.3:37145064-37145083 | MS.gene66904:CDS | 40.0% |
AACGTTAGATTCGCCTTTCG+CGG | + | chr2.3:37144567-37144586 | MS.gene66904:CDS | 45.0% | |
AAGCGAACCATAACGAGAAC+GGG | + | chr2.3:37144790-37144809 | MS.gene66904:CDS | 45.0% | |
ACCTCATGCATGGTCTTCAA+TGG | + | chr2.3:37144403-37144422 | MS.gene66904:CDS | 45.0% | |
AGTTGAGAGACATGAACCGT+TGG | + | chr2.3:37144962-37144981 | MS.gene66904:CDS | 45.0% | |
ATCCGACCCGAATTCTCATT+CGG | + | chr2.3:37144701-37144720 | MS.gene66904:CDS | 45.0% | |
ATCCTTCCGACATTGGCAAT+TGG | + | chr2.3:37143890-37143909 | MS.gene66904:CDS | 45.0% | |
CAATGTCGGAAGGATCATAG+TGG | - | chr2.3:37143885-37143904 | None:intergenic | 45.0% | |
CACTATGATCCTTCCGACAT+TGG | + | chr2.3:37143883-37143902 | MS.gene66904:CDS | 45.0% | |
CCATAAACCCGTTCTCGTTA+TGG | - | chr2.3:37144800-37144819 | None:intergenic | 45.0% | |
CGCTTCAAGCGAGTCAAAAA+CGG | - | chr2.3:37144856-37144875 | None:intergenic | 45.0% | |
GAAGCGAACCATAACGAGAA+CGG | + | chr2.3:37144789-37144808 | MS.gene66904:CDS | 45.0% | |
GAATCAAGGGAGCTTGACTT+TGG | + | chr2.3:37145106-37145125 | MS.gene66904:CDS | 45.0% | |
GACAAGCTTCGTAGTAGTGA+TGG | - | chr2.3:37144296-37144315 | None:intergenic | 45.0% | |
GCAAACATGAACACCATCTC+CGG | + | chr2.3:37144165-37144184 | MS.gene66904:CDS | 45.0% | |
GCAACGTGGTAATCTTCCAT+TGG | + | chr2.3:37144107-37144126 | MS.gene66904:CDS | 45.0% | |
GCAAGAGCTTGAATTAACGC+TGG | - | chr2.3:37144429-37144448 | None:intergenic | 45.0% | |
GCATTCGAACCCAAATGCAA+CGG | - | chr2.3:37145026-37145045 | None:intergenic | 45.0% | |
GGTTGAACCGGATAAAGCTA+TGG | + | chr2.3:37144881-37144900 | MS.gene66904:CDS | 45.0% | |
TCCTTCCGACATTGGCAATT+GGG | + | chr2.3:37143891-37143910 | MS.gene66904:CDS | 45.0% | |
TCTGACTTTGTAGCCGACAT+TGG | - | chr2.3:37143764-37143783 | None:intergenic | 45.0% | |
TGGAAGATTACCACGTTGCA+CGG | - | chr2.3:37144106-37144125 | None:intergenic | 45.0% | |
! | ACGAGAACGGGTTTATGGAA+CGG | + | chr2.3:37144802-37144821 | MS.gene66904:CDS | 45.0% |
! | CCATAACGAGAACGGGTTTA+TGG | + | chr2.3:37144797-37144816 | MS.gene66904:CDS | 45.0% |
! | CGTTAATCGAAGGCATGCAA+GGG | + | chr2.3:37144136-37144155 | MS.gene66904:CDS | 45.0% |
! | GACATGAACCGTTGGTTAAG+TGG | + | chr2.3:37144970-37144989 | MS.gene66904:CDS | 45.0% |
! | TCGTTAATCGAAGGCATGCA+AGG | + | chr2.3:37144135-37144154 | MS.gene66904:CDS | 45.0% |
! | TGAACCGTTGGTTAAGTGGA+AGG | + | chr2.3:37144974-37144993 | MS.gene66904:CDS | 45.0% |
! | TTGACTCTGTTTTCAGCGGA+GGG | + | chr2.3:37145068-37145087 | MS.gene66904:CDS | 45.0% |
!! | ATCTCGGCCATAGCTTTATC+CGG | - | chr2.3:37144891-37144910 | None:intergenic | 45.0% |
!! | CAAAGCGTCGATGAAGTATC+CGG | - | chr2.3:37144205-37144224 | None:intergenic | 45.0% |
!! | GAGTTCTAAAGAAGCTGTGG+CGG | + | chr2.3:37144638-37144657 | MS.gene66904:CDS | 45.0% |
!! | GGTGAGTTCTAAAGAAGCTG+TGG | + | chr2.3:37144635-37144654 | MS.gene66904:CDS | 45.0% |
!!! | TGTTTTGACCGAAGATGCGA+CGG | - | chr2.3:37144230-37144249 | None:intergenic | 45.0% |
AAGGGAGCTTGACTTTGGGT+TGG | + | chr2.3:37145111-37145130 | MS.gene66904:CDS | 50.0% | |
ACCCAATTGCCAATGTCGGA+AGG | - | chr2.3:37143895-37143914 | None:intergenic | 50.0% | |
ACCCGAATGAGAATTCGGGT+CGG | - | chr2.3:37144706-37144725 | None:intergenic | 50.0% | |
AGAGGCCGTGTGGTCAAATT+CGG | - | chr2.3:37143932-37143951 | None:intergenic | 50.0% | |
ATGAACACCATCTCCGGCAT+CGG | + | chr2.3:37144171-37144190 | MS.gene66904:CDS | 50.0% | |
CAAATGCAACGGTCTGAACC+CGG | - | chr2.3:37145015-37145034 | None:intergenic | 50.0% | |
CAATGACGTGGACACAATCG+TGG | - | chr2.3:37144377-37144396 | None:intergenic | 50.0% | |
CCTCTCCGAATTTGACCACA+CGG | + | chr2.3:37143924-37143943 | MS.gene66904:CDS | 50.0% | |
CGCTCCTTCCACTTAACCAA+CGG | - | chr2.3:37144981-37145000 | None:intergenic | 50.0% | |
CGGGTTTATGGAACGGTTCA+CGG | + | chr2.3:37144809-37144828 | MS.gene66904:CDS | 50.0% | |
CGGTGAAGTGTGCGAATTTG+AGG | - | chr2.3:37144323-37144342 | None:intergenic | 50.0% | |
CGTGGTAATCTTCCATTGGC+TGG | + | chr2.3:37144111-37144130 | MS.gene66904:CDS | 50.0% | |
CTGCACAGTTCATCAGCATG+TGG | - | chr2.3:37144080-37144099 | None:intergenic | 50.0% | |
CTGTCGAAGAAGATTGGTGG+TGG | - | chr2.3:37144020-37144039 | None:intergenic | 50.0% | |
GCCATTGAAGACCATGCATG+AGG | - | chr2.3:37144407-37144426 | None:intergenic | 50.0% | |
GGCTTGAAGATGTGAAGCCA+TGG | + | chr2.3:37144604-37144623 | MS.gene66904:CDS | 50.0% | |
GGGTTCAGACCGTTGCATTT+GGG | + | chr2.3:37145014-37145033 | MS.gene66904:CDS | 50.0% | |
GTCCACCCAATTGCCAATGT+CGG | - | chr2.3:37143899-37143918 | None:intergenic | 50.0% | |
GTTAACGGAGCGTGCAAGTT+CGG | - | chr2.3:37144550-37144569 | None:intergenic | 50.0% | |
GTTTATGGAACGGTTCACGG+AGG | + | chr2.3:37144812-37144831 | MS.gene66904:CDS | 50.0% | |
TCATGTCTCTCAACTCGAGC+CGG | - | chr2.3:37144957-37144976 | None:intergenic | 50.0% | |
TCCGACCCGAATTCTCATTC+GGG | + | chr2.3:37144702-37144721 | MS.gene66904:CDS | 50.0% | |
TCGATTAACGAGCCAGCCAA+TGG | - | chr2.3:37144126-37144145 | None:intergenic | 50.0% | |
TGTGAAGCCATGGATGCTTC+AGG | + | chr2.3:37144614-37144633 | MS.gene66904:CDS | 50.0% | |
TTCCGACATTGGCAATTGGG+TGG | + | chr2.3:37143894-37143913 | MS.gene66904:CDS | 50.0% | |
! | CGTTGGTTAAGTGGAAGGAG+CGG | + | chr2.3:37144979-37144998 | MS.gene66904:CDS | 50.0% |
! | GAACTCACCTGAAGCATCCA+TGG | - | chr2.3:37144624-37144643 | None:intergenic | 50.0% |
! | GCTTTGAACCGTCGCATCTT+CGG | + | chr2.3:37144219-37144238 | MS.gene66904:CDS | 50.0% |
!! | AAGAAGATTGGTGGTGGTGG+TGG | - | chr2.3:37144014-37144033 | None:intergenic | 50.0% |
!! | GTTGACTCTGTTTTCAGCGG+AGG | + | chr2.3:37145067-37145086 | MS.gene66904:CDS | 50.0% |
!! | TCGAAGAAGATTGGTGGTGG+TGG | - | chr2.3:37144017-37144036 | None:intergenic | 50.0% |
!! | TGACTTTGGGTTGGCATAGC+CGG | + | chr2.3:37145120-37145139 | MS.gene66904:CDS | 50.0% |
!! | TTGGCTGGCTCGTTAATCGA+AGG | + | chr2.3:37144126-37144145 | MS.gene66904:CDS | 50.0% |
ATGCCGGTAAGCCGGAGAAA+CGG | - | chr2.3:37144471-37144490 | None:intergenic | 55.0% | |
CAAGCCGAAGCCGCAATCAA+AGG | - | chr2.3:37145146-37145165 | None:intergenic | 55.0% | |
CAAGCTCTTGCTCTTCGTCC+TGG | + | chr2.3:37144438-37144457 | MS.gene66904:CDS | 55.0% | |
CCGTGTGGTCAAATTCGGAG+AGG | - | chr2.3:37143927-37143946 | None:intergenic | 55.0% | |
CGAGACGGAGTCCGATTTCA+CGG | - | chr2.3:37144527-37144546 | None:intergenic | 55.0% | |
CGATTTCACGGAGGTTGTCG+CGG | - | chr2.3:37144515-37144534 | None:intergenic | 55.0% | |
CGCGACAACCTCCGTGAAAT+CGG | + | chr2.3:37144513-37144532 | MS.gene66904:CDS | 55.0% | |
CGGGTTCAGACCGTTGCATT+TGG | + | chr2.3:37145013-37145032 | MS.gene66904:CDS | 55.0% | |
CTTTGATTGCGGCTTCGGCT+TGG | + | chr2.3:37145144-37145163 | MS.gene66904:CDS | 55.0% | |
CTTTGTAGCCGACATTGGCG+AGG | - | chr2.3:37143759-37143778 | None:intergenic | 55.0% | |
GCATAGCCGGCCTTTGATTG+CGG | + | chr2.3:37145133-37145152 | MS.gene66904:CDS | 55.0% | |
GTTAAGTGGAAGGAGCGGCT+CGG | + | chr2.3:37144984-37145003 | MS.gene66904:CDS | 55.0% | |
TGAAGCGTGTCCGGTTGAAC+CGG | + | chr2.3:37144869-37144888 | MS.gene66904:CDS | 55.0% | |
TGACTCGCTTGAAGCGTGTC+CGG | + | chr2.3:37144860-37144879 | MS.gene66904:CDS | 55.0% | |
TGTGCAGATTCCGTGCAACG+TGG | + | chr2.3:37144093-37144112 | MS.gene66904:CDS | 55.0% | |
TTCAGCGGAGGGTTATTGCG+TGG | + | chr2.3:37145079-37145098 | MS.gene66904:CDS | 55.0% | |
TTTCTCCGGCTTACCGGCAT+TGG | + | chr2.3:37144471-37144490 | MS.gene66904:CDS | 55.0% | |
! | GACTTTTCCGATGCCGGAGA+TGG | - | chr2.3:37144181-37144200 | None:intergenic | 55.0% |
!! | AAGATTGGTGGTGGTGGTGG+TGG | - | chr2.3:37144011-37144030 | None:intergenic | 55.0% |
AGCGTGCAAGTTCGGCGAGA+CGG | - | chr2.3:37144542-37144561 | None:intergenic | 60.0% | |
ATGCAACGTGGTGTGCTGCG+AGG | + | chr2.3:37144929-37144948 | MS.gene66904:CDS | 60.0% | |
ATTCGCCTTTCGCGGCGTTG+CGG | + | chr2.3:37144575-37144594 | MS.gene66904:CDS | 60.0% | |
CCGAAGCCGCAATCAAAGGC+CGG | - | chr2.3:37145142-37145161 | None:intergenic | 60.0% | |
CCGGCCTTTGATTGCGGCTT+CGG | + | chr2.3:37145139-37145158 | MS.gene66904:CDS | 60.0% | |
CCTCCGTTTCTCCGGCTTAC+CGG | + | chr2.3:37144465-37144484 | MS.gene66904:CDS | 60.0% | |
CGTAGGGTAAAGAGGCCGTG+TGG | - | chr2.3:37143942-37143961 | None:intergenic | 60.0% | |
GACGGAGTCCGATTTCACGG+AGG | - | chr2.3:37144524-37144543 | None:intergenic | 60.0% | |
GCTCTTGCTCTTCGTCCTGG+CGG | + | chr2.3:37144441-37144460 | MS.gene66904:CDS | 60.0% | |
TGCAACGTGGTGTGCTGCGA+GGG | + | chr2.3:37144930-37144949 | MS.gene66904:CDS | 60.0% | |
TGTAGCCGACATTGGCGAGG+AGG | - | chr2.3:37143756-37143775 | None:intergenic | 60.0% | |
TTGTCGCGGTCATCCAGCGA+CGG | - | chr2.3:37144501-37144520 | None:intergenic | 60.0% | |
! | TCCGGCATCGGAAAAGTCGC+CGG | + | chr2.3:37144183-37144202 | MS.gene66904:CDS | 60.0% |
! | TCCGGCGACTTTTCCGATGC+CGG | - | chr2.3:37144187-37144206 | None:intergenic | 60.0% |
!! | AAGGAGCGGCTCGGTAAAGC+CGG | + | chr2.3:37144993-37145012 | MS.gene66904:CDS | 60.0% |
!! | ATTGGTGGTGGTGGTGGTGG+TGG | - | chr2.3:37144008-37144027 | None:intergenic | 60.0% |
!! | TGGTGGTGGTGGTGGTGTTG+TGG | - | chr2.3:37144000-37144019 | None:intergenic | 60.0% |
!! | TGGTGGTGGTGGTGTTGTGG+CGG | - | chr2.3:37143997-37144016 | None:intergenic | 60.0% |
CCGGTAAGCCGGAGAAACGG+AGG | - | chr2.3:37144468-37144487 | None:intergenic | 65.0% | |
GACGGCCTCCTCGCCAATGT+CGG | + | chr2.3:37143748-37143767 | MS.gene66904:CDS | 65.0% | |
GCGGACCAATGCCGGTAAGC+CGG | - | chr2.3:37144479-37144498 | None:intergenic | 65.0% | |
! | CTGGCGGACCTCCGTTTCTC+CGG | + | chr2.3:37144457-37144476 | MS.gene66904:CDS | 65.0% |
!! | AGGAGCGGCTCGGTAAAGCC+GGG | + | chr2.3:37144994-37145013 | MS.gene66904:CDS | 65.0% |
!! | TGGTGGTGGTGTTGTGGCGG+CGG | - | chr2.3:37143994-37144013 | None:intergenic | 65.0% |
CAGCGACGGCGGACCAATGC+CGG | - | chr2.3:37144487-37144506 | None:intergenic | 70.0% | |
CGGAGAAACGGAGGTCCGCC+AGG | - | chr2.3:37144459-37144478 | None:intergenic | 70.0% | |
CGTGGTGTGCTGCGAGGGAC+CGG | + | chr2.3:37144935-37144954 | MS.gene66904:CDS | 70.0% | |
TCGCGGTCATCCAGCGACGG+CGG | - | chr2.3:37144498-37144517 | None:intergenic | 70.0% | |
! | GGCGGCGGTGCTGAGAGATC+TGG | - | chr2.3:37143979-37143998 | None:intergenic | 70.0% |
CCACGCCGCAACGCCGCGAA+AGG | - | chr2.3:37144583-37144602 | None:intergenic | 75.0% | |
CCTTTCGCGGCGTTGCGGCG+TGG | + | chr2.3:37144580-37144599 | MS.gene66904:CDS | 75.0% | |
TTCGCGGCGTTGCGGCGTGG+CGG | + | chr2.3:37144583-37144602 | MS.gene66904:CDS | 75.0% | |
!! | CGGCATTGGTCCGCCGTCGC+TGG | + | chr2.3:37144485-37144504 | MS.gene66904:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 37143700 | 37145214 | 37143700 | ID=MS.gene66904 |
chr2.3 | mRNA | 37143700 | 37145214 | 37143700 | ID=MS.gene66904.t1;Parent=MS.gene66904 |
chr2.3 | exon | 37143700 | 37145214 | 37143700 | ID=MS.gene66904.t1.exon1;Parent=MS.gene66904.t1 |
chr2.3 | CDS | 37143700 | 37145214 | 37143700 | ID=cds.MS.gene66904.t1;Parent=MS.gene66904.t1 |
Gene Sequence |
Protein sequence |