Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67071.t1 | XP_003589274.2 | 93.7 | 350 | 14 | 1 | 1 | 342 | 40 | 389 | 1.10E-185 | 659.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67071.t1 | Q8RYD1 | 46.6 | 163 | 83 | 2 | 123 | 281 | 11 | 173 | 5.8e-37 | 156.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67071.t1 | G7I4K8 | 93.7 | 350 | 14 | 1 | 1 | 342 | 40 | 389 | 8.3e-186 | 659.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene67071.t1 | TF | B3 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67071.t1 | MTR_1g021360 | 93.714 | 350 | 14 | 1 | 1 | 342 | 40 | 389 | 0.0 | 671 |
MS.gene67071.t1 | MTR_1g021360 | 79.433 | 141 | 28 | 1 | 121 | 260 | 10 | 150 | 3.36e-73 | 234 |
MS.gene67071.t1 | MTR_1g021320 | 75.373 | 268 | 58 | 1 | 1 | 260 | 40 | 307 | 3.71e-144 | 428 |
MS.gene67071.t1 | MTR_1g021320 | 79.577 | 142 | 27 | 1 | 121 | 260 | 9 | 150 | 2.54e-74 | 245 |
MS.gene67071.t1 | MTR_1g021320 | 65.385 | 130 | 36 | 1 | 1 | 121 | 197 | 326 | 7.53e-48 | 172 |
MS.gene67071.t1 | MTR_1g021320 | 47.748 | 111 | 19 | 4 | 269 | 342 | 413 | 521 | 4.69e-16 | 79.7 |
MS.gene67071.t1 | MTR_1g021290 | 66.316 | 285 | 64 | 3 | 1 | 274 | 42 | 305 | 4.82e-130 | 375 |
MS.gene67071.t1 | MTR_1g021290 | 72.857 | 140 | 37 | 1 | 112 | 250 | 3 | 142 | 7.29e-66 | 211 |
MS.gene67071.t1 | MTR_1g021440 | 63.736 | 273 | 47 | 6 | 121 | 342 | 7 | 278 | 5.22e-112 | 327 |
MS.gene67071.t1 | MTR_1g021440 | 70.312 | 128 | 30 | 1 | 1 | 120 | 37 | 164 | 2.75e-57 | 187 |
MS.gene67071.t1 | MTR_1g021440 | 63.736 | 273 | 47 | 6 | 121 | 342 | 7 | 278 | 1.56e-110 | 327 |
MS.gene67071.t1 | MTR_1g021440 | 70.312 | 128 | 30 | 1 | 1 | 120 | 37 | 164 | 8.08e-56 | 186 |
MS.gene67071.t1 | MTR_1g021400 | 66.923 | 260 | 46 | 7 | 121 | 342 | 14 | 271 | 1.08e-109 | 324 |
MS.gene67071.t1 | MTR_1g021400 | 77.778 | 117 | 24 | 1 | 1 | 115 | 45 | 161 | 1.84e-55 | 185 |
MS.gene67071.t1 | MTR_1g021440 | 59.794 | 291 | 47 | 7 | 121 | 342 | 7 | 296 | 6.36e-108 | 317 |
MS.gene67071.t1 | MTR_1g021440 | 70.312 | 128 | 30 | 1 | 1 | 120 | 37 | 164 | 4.35e-57 | 187 |
MS.gene67071.t1 | MTR_1g021410 | 66.279 | 258 | 51 | 5 | 121 | 342 | 7 | 264 | 9.33e-107 | 317 |
MS.gene67071.t1 | MTR_1g021410 | 73.984 | 123 | 30 | 1 | 1 | 121 | 37 | 159 | 2.05e-54 | 182 |
MS.gene67071.t1 | MTR_1g021440 | 59.794 | 291 | 47 | 7 | 121 | 342 | 7 | 296 | 1.71e-106 | 317 |
MS.gene67071.t1 | MTR_1g021440 | 70.312 | 128 | 30 | 1 | 1 | 120 | 37 | 164 | 1.09e-55 | 187 |
MS.gene67071.t1 | MTR_1g021435 | 62.692 | 260 | 58 | 6 | 121 | 342 | 6 | 264 | 2.81e-100 | 300 |
MS.gene67071.t1 | MTR_1g021435 | 79.091 | 110 | 23 | 0 | 1 | 110 | 37 | 146 | 9.88e-54 | 181 |
MS.gene67071.t1 | MTR_1g021330 | 60.370 | 270 | 59 | 8 | 121 | 342 | 10 | 279 | 5.20e-100 | 300 |
MS.gene67071.t1 | MTR_1g021330 | 71.875 | 128 | 29 | 1 | 1 | 121 | 41 | 168 | 2.75e-58 | 193 |
MS.gene67071.t1 | MTR_1g021380 | 60.800 | 250 | 69 | 6 | 121 | 342 | 6 | 254 | 2.99e-93 | 282 |
MS.gene67071.t1 | MTR_1g021380 | 65.517 | 116 | 35 | 2 | 1 | 115 | 36 | 147 | 3.98e-45 | 157 |
MS.gene67071.t1 | MTR_1g021350 | 59.722 | 216 | 50 | 5 | 121 | 299 | 6 | 221 | 1.64e-77 | 241 |
MS.gene67071.t1 | MTR_1g021350 | 74.380 | 121 | 21 | 1 | 1 | 121 | 36 | 146 | 1.80e-54 | 182 |
MS.gene67071.t1 | MTR_1g021500 | 44.531 | 256 | 57 | 9 | 117 | 306 | 7 | 243 | 1.07e-52 | 180 |
MS.gene67071.t1 | MTR_1g021500 | 42.000 | 150 | 61 | 6 | 1 | 145 | 41 | 169 | 3.96e-22 | 97.1 |
MS.gene67071.t1 | MTR_1g021500 | 44.531 | 256 | 57 | 9 | 117 | 306 | 7 | 243 | 3.34e-52 | 180 |
MS.gene67071.t1 | MTR_1g021500 | 42.000 | 150 | 61 | 6 | 1 | 145 | 41 | 169 | 6.43e-22 | 96.7 |
MS.gene67071.t1 | MTR_1g021270 | 32.184 | 261 | 121 | 10 | 133 | 342 | 15 | 270 | 3.24e-24 | 103 |
MS.gene67071.t1 | MTR_1g021270 | 38.372 | 86 | 52 | 1 | 2 | 87 | 31 | 115 | 5.75e-13 | 70.1 |
MS.gene67071.t1 | MTR_7g050640 | 38.272 | 81 | 50 | 0 | 148 | 228 | 26 | 106 | 3.10e-14 | 68.6 |
MS.gene67071.t1 | MTR_7g050640 | 41.892 | 74 | 43 | 0 | 2 | 75 | 29 | 102 | 2.24e-13 | 66.2 |
MS.gene67071.t1 | MTR_3g098790 | 35.052 | 97 | 61 | 1 | 135 | 229 | 11 | 107 | 5.85e-14 | 72.0 |
MS.gene67071.t1 | MTR_7g050580 | 37.000 | 100 | 60 | 1 | 130 | 229 | 11 | 107 | 1.53e-13 | 70.9 |
MS.gene67071.t1 | MTR_7g050710 | 24.373 | 279 | 150 | 9 | 2 | 223 | 29 | 303 | 8.17e-13 | 68.6 |
MS.gene67071.t1 | MTR_7g050710 | 38.158 | 76 | 47 | 0 | 149 | 224 | 27 | 102 | 1.28e-12 | 68.2 |
MS.gene67071.t1 | MTR_7g050720 | 38.542 | 96 | 56 | 1 | 130 | 225 | 8 | 100 | 9.40e-13 | 68.6 |
MS.gene67071.t1 | MTR_1g034240 | 39.241 | 79 | 48 | 0 | 147 | 225 | 19 | 97 | 1.91e-11 | 65.1 |
MS.gene67071.t1 | MTR_3g061310 | 25.490 | 204 | 123 | 6 | 137 | 331 | 13 | 196 | 2.68e-11 | 63.9 |
MS.gene67071.t1 | MTR_7g050590 | 36.709 | 79 | 50 | 0 | 151 | 229 | 2 | 80 | 2.97e-11 | 63.9 |
MS.gene67071.t1 | MTR_5g044670 | 30.702 | 114 | 76 | 1 | 146 | 259 | 27 | 137 | 3.14e-11 | 63.9 |
MS.gene67071.t1 | MTR_4g068320 | 39.744 | 78 | 47 | 0 | 147 | 224 | 18 | 95 | 4.39e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene67071.t1 | AT4G33280 | 47.561 | 164 | 85 | 1 | 123 | 285 | 11 | 174 | 7.18e-49 | 166 |
MS.gene67071.t1 | AT4G33280 | 49.505 | 101 | 50 | 1 | 1 | 100 | 38 | 138 | 9.04e-26 | 104 |
MS.gene67071.t1 | AT4G33280 | 47.561 | 164 | 85 | 1 | 123 | 285 | 11 | 174 | 2.53e-47 | 165 |
MS.gene67071.t1 | AT4G33280 | 49.505 | 101 | 50 | 1 | 1 | 100 | 38 | 138 | 4.24e-25 | 105 |
MS.gene67071.t1 | AT4G33280 | 47.205 | 161 | 81 | 2 | 123 | 279 | 11 | 171 | 1.15e-45 | 159 |
MS.gene67071.t1 | AT4G33280 | 28.679 | 265 | 136 | 6 | 1 | 212 | 38 | 302 | 3.92e-26 | 107 |
MS.gene67071.t1 | AT4G34400 | 35.714 | 98 | 63 | 0 | 137 | 234 | 17 | 114 | 6.78e-18 | 84.3 |
MS.gene67071.t1 | AT4G34400 | 36.471 | 85 | 54 | 0 | 1 | 85 | 30 | 114 | 2.29e-16 | 79.7 |
MS.gene67071.t1 | AT4G34400 | 35.714 | 98 | 63 | 0 | 137 | 234 | 17 | 114 | 6.78e-18 | 84.3 |
MS.gene67071.t1 | AT4G34400 | 36.471 | 85 | 54 | 0 | 1 | 85 | 30 | 114 | 2.29e-16 | 79.7 |
MS.gene67071.t1 | AT3G06220 | 26.115 | 157 | 112 | 1 | 137 | 293 | 11 | 163 | 4.17e-15 | 72.8 |
MS.gene67071.t1 | AT3G06220 | 27.434 | 113 | 74 | 2 | 2 | 114 | 25 | 129 | 4.26e-12 | 64.3 |
MS.gene67071.t1 | AT5G60130 | 38.614 | 101 | 57 | 2 | 137 | 232 | 15 | 115 | 3.74e-14 | 71.6 |
MS.gene67071.t1 | AT3G18990 | 36.957 | 92 | 58 | 0 | 134 | 225 | 5 | 96 | 7.14e-14 | 72.4 |
MS.gene67071.t1 | AT3G18990 | 40.000 | 75 | 45 | 0 | 2 | 76 | 22 | 96 | 5.28e-12 | 66.6 |
MS.gene67071.t1 | AT3G18990 | 36.957 | 92 | 58 | 0 | 134 | 225 | 5 | 96 | 7.45e-14 | 72.0 |
MS.gene67071.t1 | AT3G18990 | 40.000 | 75 | 45 | 0 | 2 | 76 | 22 | 96 | 4.23e-12 | 66.6 |
MS.gene67071.t1 | AT3G06160 | 27.143 | 140 | 93 | 3 | 137 | 275 | 26 | 157 | 9.05e-14 | 71.6 |
MS.gene67071.t1 | AT3G06160 | 27.143 | 140 | 93 | 3 | 137 | 275 | 11 | 142 | 1.00e-13 | 71.2 |
MS.gene67071.t1 | AT3G06160 | 27.143 | 140 | 93 | 3 | 137 | 275 | 11 | 142 | 1.00e-13 | 71.2 |
MS.gene67071.t1 | AT3G06160 | 27.143 | 140 | 93 | 3 | 137 | 275 | 11 | 142 | 1.00e-13 | 71.2 |
MS.gene67071.t1 | AT5G60130 | 38.614 | 101 | 57 | 2 | 137 | 232 | 15 | 115 | 1.08e-13 | 71.2 |
MS.gene67071.t1 | AT5G60130 | 38.614 | 101 | 57 | 2 | 137 | 232 | 15 | 115 | 1.11e-13 | 71.2 |
MS.gene67071.t1 | AT5G60130 | 38.614 | 101 | 57 | 2 | 137 | 232 | 12 | 112 | 1.16e-13 | 71.2 |
MS.gene67071.t1 | AT5G60130 | 41.573 | 89 | 47 | 2 | 149 | 232 | 1 | 89 | 1.55e-13 | 70.9 |
MS.gene67071.t1 | AT3G06160 | 27.143 | 140 | 93 | 3 | 137 | 275 | 70 | 201 | 1.74e-13 | 71.2 |
MS.gene67071.t1 | AT5G66980 | 31.169 | 154 | 97 | 3 | 137 | 286 | 11 | 159 | 3.11e-12 | 67.0 |
MS.gene67071.t1 | AT3G53310 | 34.831 | 89 | 58 | 0 | 137 | 225 | 12 | 100 | 6.82e-12 | 65.9 |
MS.gene67071.t1 | AT5G60140 | 31.481 | 108 | 71 | 1 | 128 | 232 | 7 | 114 | 1.07e-11 | 65.5 |
Find 72 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTTAAGGGTCACACTTTC+TGG | 0.078351 | 1.2:-3224185 | None:intergenic |
CAACTCCACTAGGACCTTTA+AGG | 0.178570 | 1.2:-3223085 | None:intergenic |
CAACTCCACTAGGACCTTTA+AGG | 0.178570 | 1.2:-3224199 | None:intergenic |
CAAAATCGGTGCGAAGAAAT+TGG | 0.189182 | 1.2:-3223442 | None:intergenic |
CCAGCAAATGTGACCCTTAA+AGG | 0.268883 | 1.2:+3223071 | MS.gene67071:CDS |
CCAGAAAGTGTGACCCTTAA+AGG | 0.272751 | 1.2:+3224185 | MS.gene67071:CDS |
TCACAAGAGTTACCTGCTTT+TGG | 0.287075 | 1.2:-3224587 | None:intergenic |
AGTGGAGTTGTGTGGAATAT+AGG | 0.300231 | 1.2:+3224212 | MS.gene67071:CDS |
CCTTTAAGGGTCACATTTGC+TGG | 0.308416 | 1.2:-3223071 | None:intergenic |
TGTCGATGGTCCACGTATTC+TGG | 0.310730 | 1.2:+3226707 | MS.gene67071:CDS |
AGTGGAGTTGTGTGGGATAT+AGG | 0.336475 | 1.2:+3223098 | MS.gene67071:CDS |
TGTTTCCCCTGAGCAGTTCA+TGG | 0.340150 | 1.2:+3224472 | MS.gene67071:CDS |
GTCGTCTTCCTCGCTTAGTC+TGG | 0.342526 | 1.2:-3224565 | None:intergenic |
ATTGGGTGAAATGGATGAAT+TGG | 0.352469 | 1.2:-3223424 | None:intergenic |
CATGGGAGGAAGACATTTAC+TGG | 0.353390 | 1.2:+3223393 | MS.gene67071:CDS |
CGGTGTTGAATGCGGTTTGC+TGG | 0.371258 | 1.2:+3223364 | MS.gene67071:CDS |
TGAAATGGATGAATTGGAAA+TGG | 0.407277 | 1.2:-3223418 | None:intergenic |
GTGGAGTTGTGTGGAATATA+GGG | 0.421556 | 1.2:+3224213 | MS.gene67071:CDS |
ACAGGCGTAACTTCATTAAC+AGG | 0.421710 | 1.2:-3224542 | None:intergenic |
GTGGAGTTGTGTGGGATATA+GGG | 0.433125 | 1.2:+3223099 | MS.gene67071:CDS |
AACAAGTTGCTGTTCAAAAT+CGG | 0.433766 | 1.2:-3223456 | None:intergenic |
CAATGGTGAATCACTCTTTG+AGG | 0.437853 | 1.2:+3223220 | MS.gene67071:CDS |
TGCGAAGAAATTGGGTGAAA+TGG | 0.439739 | 1.2:-3223433 | None:intergenic |
AAAATCGGTGCGAAGAAATT+GGG | 0.448775 | 1.2:-3223441 | None:intergenic |
TTTAACAAAATAAGGAAAAG+AGG | 0.464646 | 1.2:-3226667 | None:intergenic |
GCATCAGCCATGAACTGCTC+AGG | 0.467203 | 1.2:-3224479 | None:intergenic |
CCTCCCAAACAAACGGCAAA+AGG | 0.468139 | 1.2:+3224507 | MS.gene67071:CDS |
AAAAGAGGAGGTAAATGATT+CGG | 0.471467 | 1.2:-3226652 | None:intergenic |
AACTCCACTAGGACCTTTAA+GGG | 0.479312 | 1.2:-3223084 | None:intergenic |
AACTCCACTAGGACCTTTAA+GGG | 0.479312 | 1.2:-3224198 | None:intergenic |
CAACGGTAAATCACTCTTTG+AGG | 0.482140 | 1.2:+3224334 | MS.gene67071:CDS |
GGCACTTCCTAAAACATTCT+CGG | 0.491082 | 1.2:+3224142 | MS.gene67071:intron |
CTTCCTCGCTTAGTCTGGAC+AGG | 0.500517 | 1.2:-3224560 | None:intergenic |
CTGTTTACTTCGTGGACGGT+TGG | 0.503491 | 1.2:+3224255 | MS.gene67071:CDS |
CACCATTGTACTTGAAGACA+AGG | 0.518563 | 1.2:-3223205 | None:intergenic |
GAAATGGATGAATTGGAAAT+GGG | 0.527526 | 1.2:-3223417 | None:intergenic |
AGATGATACTGTTTACTTCG+TGG | 0.529756 | 1.2:+3224247 | MS.gene67071:CDS |
GCGGTTCCCTCCCAAACAAA+CGG | 0.536582 | 1.2:+3224500 | MS.gene67071:CDS |
CAATTTACTCCACGGATGGT+TGG | 0.537159 | 1.2:+3223141 | MS.gene67071:CDS |
GGGAATGCTCAAACCGAACA+AGG | 0.539691 | 1.2:+3224419 | MS.gene67071:CDS |
TTCCTTGTCTTCAAGTACAA+TGG | 0.547188 | 1.2:+3223203 | MS.gene67071:CDS |
TGGAGATAGTTTCTGTGAGA+AGG | 0.547709 | 1.2:+3224370 | MS.gene67071:CDS |
ATATCCCACACAACTCCACT+AGG | 0.558401 | 1.2:-3223095 | None:intergenic |
AAGGTCCTAGTGGAGTTGTG+TGG | 0.558725 | 1.2:+3223090 | MS.gene67071:CDS |
AAGGACACAGACACTTCTAA+TGG | 0.558911 | 1.2:+3223341 | MS.gene67071:CDS |
TTCCTTGTCTTTAAGTACAA+CGG | 0.560047 | 1.2:+3224317 | MS.gene67071:CDS |
ATCAAAACGTTCAATGTCGA+TGG | 0.563766 | 1.2:+3226693 | MS.gene67071:CDS |
CGAGGAAGACGACCAAAAGC+AGG | 0.564365 | 1.2:+3224575 | MS.gene67071:CDS |
CATCAGCCATGAACTGCTCA+GGG | 0.564547 | 1.2:-3224478 | None:intergenic |
TACCGTTGTACTTAAAGACA+AGG | 0.571756 | 1.2:-3224319 | None:intergenic |
ATATTCCACACAACTCCACT+AGG | 0.578077 | 1.2:-3224209 | None:intergenic |
GAATTGTTGCCAACCATCCG+TGG | 0.586978 | 1.2:-3223150 | None:intergenic |
AGGTCCTAGTGGAGTTGTGT+GGG | 0.591978 | 1.2:+3223091 | MS.gene67071:CDS |
GATACAATTTACTCCACGGA+TGG | 0.597040 | 1.2:+3223137 | MS.gene67071:CDS |
GATACTGTTTACTTCGTGGA+CGG | 0.601093 | 1.2:+3224251 | MS.gene67071:CDS |
TCTAATGGCGGTGTTGAATG+CGG | 0.602315 | 1.2:+3223356 | MS.gene67071:CDS |
ACAAGGAGGTCGCAATGCAA+AGG | 0.616207 | 1.2:+3223322 | MS.gene67071:CDS |
AACAAAATAAGGAAAAGAGG+AGG | 0.617290 | 1.2:-3226664 | None:intergenic |
AAGGTCCTAGTGGAGTTGTG+TGG | 0.624686 | 1.2:+3224204 | MS.gene67071:CDS |
GGAATGCTCAAACCGAACAA+GGG | 0.628948 | 1.2:+3224420 | MS.gene67071:CDS |
GGACAAGCTCATACTGAACA+AGG | 0.629596 | 1.2:+3223305 | MS.gene67071:CDS |
TGAGCAGTTCATGGCTGATG+CGG | 0.629723 | 1.2:+3224481 | MS.gene67071:CDS |
GTGACCCTTAAAGGTCCTAG+TGG | 0.630968 | 1.2:+3223080 | MS.gene67071:CDS |
AGATGATACAATTTACTCCA+CGG | 0.640312 | 1.2:+3223133 | MS.gene67071:CDS |
GTGACCCTTAAAGGTCCTAG+TGG | 0.642671 | 1.2:+3224194 | MS.gene67071:CDS |
ACGGCAAAAGGATCAAGAAG+AGG | 0.646902 | 1.2:+3224519 | MS.gene67071:CDS |
GAATGCTCAAACCGAACAAG+GGG | 0.647827 | 1.2:+3224421 | MS.gene67071:CDS |
ACGCCTGTCCAGACTAAGCG+AGG | 0.652299 | 1.2:+3224557 | MS.gene67071:CDS |
GACACAGACACTTCTAATGG+CGG | 0.675478 | 1.2:+3223344 | MS.gene67071:CDS |
ATCAGCCATGAACTGCTCAG+GGG | 0.743763 | 1.2:-3224477 | None:intergenic |
CAAGCTCATACTGAACAAGG+AGG | 0.768313 | 1.2:+3223308 | MS.gene67071:CDS |
AATGCTCAAACCGAACAAGG+GGG | 0.785077 | 1.2:+3224422 | MS.gene67071:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTAAATAGTAAAAGTTAA+TGG | - | chr1.2:3224676-3224695 | None:intergenic | 10.0% |
!! | TTAAATAAAATAATAAGCTT+TGG | - | chr1.2:3226552-3226571 | None:intergenic | 10.0% |
!! | AAAGAATTAACTAAAGTTAA+GGG | - | chr1.2:3223686-3223705 | None:intergenic | 15.0% |
!! | AAATAATTATGTTTAACTCT+TGG | + | chr1.2:3223937-3223956 | MS.gene67071:intron | 15.0% |
!! | AGATAGATACAAAATTTAAA+AGG | - | chr1.2:3223657-3223676 | None:intergenic | 15.0% |
!! | ATTGATTAAAGGAAAATAAA+AGG | + | chr1.2:3223875-3223894 | MS.gene67071:intron | 15.0% |
!!! | TTGATCATTTTAACAAAATA+AGG | - | chr1.2:3226678-3226697 | None:intergenic | 15.0% |
!! | AAAATAAAAGGAAGTGAATA+AGG | + | chr1.2:3223887-3223906 | MS.gene67071:intron | 20.0% |
!! | AAAGCAAGAAAAAAAGAAAA+AGG | - | chr1.2:3223504-3223523 | None:intergenic | 20.0% |
!! | AGATACAAAATTTAAAAGGT+GGG | - | chr1.2:3223653-3223672 | None:intergenic | 20.0% |
!! | ATACAAATTTGACAAAAAAG+TGG | - | chr1.2:3224990-3225009 | None:intergenic | 20.0% |
!! | CAAAGAATTAACTAAAGTTA+AGG | - | chr1.2:3223687-3223706 | None:intergenic | 20.0% |
!! | CAAATTTCATTTGTAATTCT+AGG | + | chr1.2:3225319-3225338 | MS.gene67071:intron | 20.0% |
!! | CATTTAAGTAGATTGATTAA+AGG | + | chr1.2:3223864-3223883 | MS.gene67071:intron | 20.0% |
!! | GAAGTTCATATATAATGTAT+CGG | + | chr1.2:3225065-3225084 | MS.gene67071:intron | 20.0% |
!! | TAGATACAAAATTTAAAAGG+TGG | - | chr1.2:3223654-3223673 | None:intergenic | 20.0% |
!! | TTTAACAAAATAAGGAAAAG+AGG | - | chr1.2:3226670-3226689 | None:intergenic | 20.0% |
!! | TTTCCATTAATAAATGTGAT+AGG | + | chr1.2:3225640-3225659 | MS.gene67071:intron | 20.0% |
!!! | AATTGCCTTTGATTTTATTT+TGG | + | chr1.2:3226430-3226449 | MS.gene67071:intron | 20.0% |
!!! | ATTGCCTTTGATTTTATTTT+GGG | + | chr1.2:3226431-3226450 | MS.gene67071:intron | 20.0% |
!!! | GAAATTTACATTTTAATTGC+AGG | + | chr1.2:3224121-3224140 | MS.gene67071:intron | 20.0% |
!!! | TCACATGTTTTTACTTAAAA+AGG | + | chr1.2:3225105-3225124 | MS.gene67071:intron | 20.0% |
!!! | TCTATTTTACAATTTCTACT+GGG | - | chr1.2:3226214-3226233 | None:intergenic | 20.0% |
!!! | TTCTAAAGTGTTTCATATTT+GGG | + | chr1.2:3223553-3223572 | MS.gene67071:intron | 20.0% |
!!! | TTCTATTTTACAATTTCTAC+TGG | - | chr1.2:3226215-3226234 | None:intergenic | 20.0% |
!!! | TTCTTTTGTCATTTGATATA+TGG | + | chr1.2:3225022-3225041 | MS.gene67071:intron | 20.0% |
!!! | TTGTGCTTGTTTTTAAATAA+TGG | + | chr1.2:3223725-3223744 | MS.gene67071:intron | 20.0% |
!!! | TTGTTTTTAAATAATGGCTT+AGG | + | chr1.2:3223731-3223750 | MS.gene67071:intron | 20.0% |
!!! | TTTCTAAAGTGTTTCATATT+TGG | + | chr1.2:3223552-3223571 | MS.gene67071:intron | 20.0% |
!!! | TTTGAGGTTTTAATATTTGA+TGG | + | chr1.2:3224350-3224369 | MS.gene67071:CDS | 20.0% |
! | AAAAAGGAAACAAGAATGAA+GGG | - | chr1.2:3223488-3223507 | None:intergenic | 25.0% |
! | AAAAATAAAGCTTGAGATGA+AGG | - | chr1.2:3225623-3225642 | None:intergenic | 25.0% |
! | AAATTTGACAAAAAAGTGGT+TGG | - | chr1.2:3224986-3225005 | None:intergenic | 25.0% |
! | AAGGGAATAAATTCAAAGTA+TGG | + | chr1.2:3225181-3225200 | MS.gene67071:intron | 25.0% |
! | AATTGCAATATTGTTCAAGA+AGG | + | chr1.2:3226267-3226286 | MS.gene67071:intron | 25.0% |
! | AGACACACATTATTATCAAT+TGG | - | chr1.2:3224899-3224918 | None:intergenic | 25.0% |
! | ATAAATAGTGTTTGCAGAAT+CGG | - | chr1.2:3223980-3223999 | None:intergenic | 25.0% |
! | ATATTCTACGAATATCTCTT+GGG | + | chr1.2:3224064-3224083 | MS.gene67071:intron | 25.0% |
! | ATCAAATGACAAAAGAAAAG+TGG | - | chr1.2:3225019-3225038 | None:intergenic | 25.0% |
! | ATTAACTAAAGTTAAGGGAA+TGG | - | chr1.2:3223681-3223700 | None:intergenic | 25.0% |
! | CTTAGGAACATTATAAAAAG+GGG | - | chr1.2:3224814-3224833 | None:intergenic | 25.0% |
! | GACACACATTATTATCAATT+GGG | - | chr1.2:3224898-3224917 | None:intergenic | 25.0% |
! | GATAATAATGTGTGTCTATT+TGG | + | chr1.2:3224902-3224921 | MS.gene67071:intron | 25.0% |
! | GCTTAGGAACATTATAAAAA+GGG | - | chr1.2:3224815-3224834 | None:intergenic | 25.0% |
! | TAGACCCAAAATAAAATCAA+AGG | - | chr1.2:3226438-3226457 | None:intergenic | 25.0% |
! | TATATTCTACGAATATCTCT+TGG | + | chr1.2:3224063-3224082 | MS.gene67071:intron | 25.0% |
!! | AAATTGTCTGAGAATGTTTT+AGG | - | chr1.2:3223038-3223057 | None:intergenic | 25.0% |
!! | ATGTATCTTTTAATCTCAGA+TGG | + | chr1.2:3224099-3224118 | MS.gene67071:intron | 25.0% |
!! | GTGATTTTATGTAAGAATCA+TGG | + | chr1.2:3225203-3225222 | MS.gene67071:intron | 25.0% |
!! | TAAGCTTTGGCATAAATATA+AGG | - | chr1.2:3226539-3226558 | None:intergenic | 25.0% |
!!! | CTTATTTTGTTGGAAAATGT+GGG | + | chr1.2:3224399-3224418 | MS.gene67071:CDS | 25.0% |
!!! | TCTTATTTTATTCTTGAACG+TGG | + | chr1.2:3223284-3223303 | MS.gene67071:CDS | 25.0% |
!!! | TCTTATTTTGTTGGAAAATG+TGG | + | chr1.2:3224398-3224417 | MS.gene67071:CDS | 25.0% |
!!! | TTTGAGGTTTTAATCTTTCA+TGG | + | chr1.2:3223236-3223255 | MS.gene67071:CDS | 25.0% |
AAAAGAGGAGGTAAATGATT+CGG | - | chr1.2:3226655-3226674 | None:intergenic | 30.0% | |
AACAAAATAAGGAAAAGAGG+AGG | - | chr1.2:3226667-3226686 | None:intergenic | 30.0% | |
AAGACATATTGATCTCTCAA+AGG | - | chr1.2:3225549-3225568 | None:intergenic | 30.0% | |
AATGACAAAAGAAAAGTGGT+TGG | - | chr1.2:3225015-3225034 | None:intergenic | 30.0% | |
ACAGACAACTGAAGATAAAA+AGG | + | chr1.2:3226236-3226255 | MS.gene67071:intron | 30.0% | |
AGATGATACAATTTACTCCA+CGG | + | chr1.2:3223133-3223152 | MS.gene67071:CDS | 30.0% | |
ATTGCCATGATTAGAAGATT+AGG | - | chr1.2:3225877-3225896 | None:intergenic | 30.0% | |
CAAGCATTTCTTGAAAATTG+AGG | - | chr1.2:3225587-3225606 | None:intergenic | 30.0% | |
CGCTTAGGAACATTATAAAA+AGG | - | chr1.2:3224816-3224835 | None:intergenic | 30.0% | |
GAAAAAGGAAACAAGAATGA+AGG | - | chr1.2:3223489-3223508 | None:intergenic | 30.0% | |
GAAATGGATGAATTGGAAAT+GGG | - | chr1.2:3223420-3223439 | None:intergenic | 30.0% | |
GGTCCTATCACATTTATTAA+TGG | - | chr1.2:3225646-3225665 | None:intergenic | 30.0% | |
TAATCTTCTAATCATGGCAA+TGG | + | chr1.2:3225876-3225895 | MS.gene67071:intron | 30.0% | |
TCAAAAGCAAACACTAGAAA+GGG | - | chr1.2:3223797-3223816 | None:intergenic | 30.0% | |
TCACAAGAAAAGTTATGACA+AGG | - | chr1.2:3225452-3225471 | None:intergenic | 30.0% | |
TGAAATGGATGAATTGGAAA+TGG | - | chr1.2:3223421-3223440 | None:intergenic | 30.0% | |
TGCAAACACTATTTATGTAC+TGG | + | chr1.2:3223984-3224003 | MS.gene67071:intron | 30.0% | |
TGCAAGGTTTGCAATAAATT+TGG | + | chr1.2:3225420-3225439 | MS.gene67071:intron | 30.0% | |
TGTTCCTAATCTTCTAATCA+TGG | + | chr1.2:3225870-3225889 | MS.gene67071:intron | 30.0% | |
TTAACTTTAGCAGATGACTT+GGG | + | chr1.2:3225147-3225166 | MS.gene67071:intron | 30.0% | |
TTAGAAGATAAGCAAAGTCA+AGG | - | chr1.2:3226404-3226423 | None:intergenic | 30.0% | |
TTCCTTGTCTTTAAGTACAA+CGG | + | chr1.2:3224317-3224336 | MS.gene67071:CDS | 30.0% | |
! | AAATTGTCCGAGAATGTTTT+AGG | - | chr1.2:3224152-3224171 | None:intergenic | 30.0% |
! | AACAAGTTGCTGTTCAAAAT+CGG | - | chr1.2:3223459-3223478 | None:intergenic | 30.0% |
! | TTCTTGTGATTTTGCTCAAT+GGG | + | chr1.2:3225463-3225482 | MS.gene67071:intron | 30.0% |
! | TTTCTTGTGATTTTGCTCAA+TGG | + | chr1.2:3225462-3225481 | MS.gene67071:intron | 30.0% |
! | TTTTATAATGTTCCTAAGCG+TGG | + | chr1.2:3224816-3224835 | MS.gene67071:intron | 30.0% |
!! | GGAAGAATCATTGTTTTGTT+TGG | + | chr1.2:3225224-3225243 | MS.gene67071:intron | 30.0% |
!! | TTTCTTGCTTCTGTTATTTC+TGG | + | chr1.2:3225353-3225372 | MS.gene67071:intron | 30.0% |
!!! | GTTTTTGAGTCTCTATCAAT+TGG | - | chr1.2:3226080-3226099 | None:intergenic | 30.0% |
AAAAGCAAACACTAGAAAGG+GGG | - | chr1.2:3223795-3223814 | None:intergenic | 35.0% | |
AAAATCGGTGCGAAGAAATT+GGG | - | chr1.2:3223444-3223463 | None:intergenic | 35.0% | |
AAATGTGATAGGACCCATTA+AGG | + | chr1.2:3225651-3225670 | MS.gene67071:intron | 35.0% | |
AACAAATTAGTCCAACCTTC+CGG | + | chr1.2:3225381-3225400 | MS.gene67071:intron | 35.0% | |
AATGTGATAGGACCCATTAA+GGG | + | chr1.2:3225652-3225671 | MS.gene67071:intron | 35.0% | |
AGAGAAATACACATGGAAGA+GGG | + | chr1.2:3225729-3225748 | MS.gene67071:intron | 35.0% | |
AGATGATACTGTTTACTTCG+TGG | + | chr1.2:3224247-3224266 | MS.gene67071:CDS | 35.0% | |
AGCATTGCTTTGTGTAGTTA+GGG | + | chr1.2:3225276-3225295 | MS.gene67071:intron | 35.0% | |
AGGATCTTTAACGTGAAATC+CGG | + | chr1.2:3225985-3226004 | MS.gene67071:intron | 35.0% | |
ATCAAAACGTTCAATGTCGA+TGG | + | chr1.2:3226693-3226712 | MS.gene67071:CDS | 35.0% | |
ATTAGTGGAAAGGAATTGCA+AGG | + | chr1.2:3225404-3225423 | MS.gene67071:intron | 35.0% | |
ATTGGGTGAAATGGATGAAT+TGG | - | chr1.2:3223427-3223446 | None:intergenic | 35.0% | |
ATTTGGACCTTTCCCTTAAT+GGG | - | chr1.2:3225667-3225686 | None:intergenic | 35.0% | |
CAAAAGCAAACACTAGAAAG+GGG | - | chr1.2:3223796-3223815 | None:intergenic | 35.0% | |
CAAGTCATCTGCTAAAGTTA+AGG | - | chr1.2:3225148-3225167 | None:intergenic | 35.0% | |
CTCAAAAGCAAACACTAGAA+AGG | - | chr1.2:3223798-3223817 | None:intergenic | 35.0% | |
CTTAACTTTAGCAGATGACT+TGG | + | chr1.2:3225146-3225165 | MS.gene67071:intron | 35.0% | |
CTTAGGAACTTTGACAATAG+TGG | + | chr1.2:3223748-3223767 | MS.gene67071:intron | 35.0% | |
CTTGTAATAAGGAACACTCT+GGG | + | chr1.2:3224630-3224649 | MS.gene67071:intron | 35.0% | |
GATTAGAAGATTAGGAACAC+AGG | - | chr1.2:3225869-3225888 | None:intergenic | 35.0% | |
GCATTTCTTGAAAATTGAGG+TGG | - | chr1.2:3225584-3225603 | None:intergenic | 35.0% | |
TACCGTTGTACTTAAAGACA+AGG | - | chr1.2:3224322-3224341 | None:intergenic | 35.0% | |
TAGCAAACTGATACTTGTCT+AGG | + | chr1.2:3226491-3226510 | MS.gene67071:intron | 35.0% | |
TCAATTCGATACACATGCTT+CGG | + | chr1.2:3224728-3224747 | MS.gene67071:intron | 35.0% | |
TCTACTTAAATGTAGACGCA+TGG | - | chr1.2:3223856-3223875 | None:intergenic | 35.0% | |
TGTCAACTTAGTTAGAGAGA+GGG | + | chr1.2:3225706-3225725 | MS.gene67071:intron | 35.0% | |
TTCCTTGTCTTCAAGTACAA+TGG | + | chr1.2:3223203-3223222 | MS.gene67071:CDS | 35.0% | |
TTGTCAACTTAGTTAGAGAG+AGG | + | chr1.2:3225705-3225724 | MS.gene67071:intron | 35.0% | |
TTTCACGTTAAAGATCCTGT+TGG | - | chr1.2:3225983-3226002 | None:intergenic | 35.0% | |
TTTGGACATGTATCTCATCT+TGG | + | chr1.2:3224920-3224939 | MS.gene67071:intron | 35.0% | |
! | AGAAATGCTTGAGTTTTCTG+AGG | + | chr1.2:3225596-3225615 | MS.gene67071:intron | 35.0% |
! | AGCTTTGCTCTATGGATTAT+AGG | - | chr1.2:3226161-3226180 | None:intergenic | 35.0% |
! | CAATATGTCTTGCTTTGAGT+AGG | + | chr1.2:3225558-3225577 | MS.gene67071:intron | 35.0% |
! | CTTTTCTTCAAGCATTCACA+AGG | - | chr1.2:3226371-3226390 | None:intergenic | 35.0% |
! | TAGACAAGTATCAGTTTGCT+AGG | - | chr1.2:3226492-3226511 | None:intergenic | 35.0% |
! | TTTGCTCTATGGATTATAGG+AGG | - | chr1.2:3226158-3226177 | None:intergenic | 35.0% |
!! | AGACAAGTATCAGTTTGCTA+GGG | - | chr1.2:3226491-3226510 | None:intergenic | 35.0% |
!! | TGATTTGGTGGCTTGTAATA+AGG | + | chr1.2:3224619-3224638 | MS.gene67071:intron | 35.0% |
!!! | AAGGCAGCTTCTTATTTTGT+TGG | + | chr1.2:3224389-3224408 | MS.gene67071:CDS | 35.0% |
AAAGCAAACACTAGAAAGGG+GGG | - | chr1.2:3223794-3223813 | None:intergenic | 40.0% | |
AACTCCACTAGGACCTTTAA+GGG | - | chr1.2:3223087-3223106 | None:intergenic | 40.0% | |
AACTGTTCAATTCCACACAG+AGG | + | chr1.2:3226584-3226603 | MS.gene67071:intron | 40.0% | |
AAGGACACAGACACTTCTAA+TGG | + | chr1.2:3223341-3223360 | MS.gene67071:CDS | 40.0% | |
ACAGGCGTAACTTCATTAAC+AGG | - | chr1.2:3224545-3224564 | None:intergenic | 40.0% | |
ACGTTAAAGATCCTGTTGGA+TGG | - | chr1.2:3225979-3225998 | None:intergenic | 40.0% | |
AGAAGATTAGGAACACAGGT+GGG | - | chr1.2:3225865-3225884 | None:intergenic | 40.0% | |
AGTGGAGTTGTGTGGAATAT+AGG | + | chr1.2:3224212-3224231 | MS.gene67071:CDS | 40.0% | |
ATACGTGTTTGACCTTTAGC+AGG | - | chr1.2:3225524-3225543 | None:intergenic | 40.0% | |
ATAGAGCAAAGCTCTTTCAG+AGG | + | chr1.2:3226168-3226187 | MS.gene67071:intron | 40.0% | |
ATATTCCACACAACTCCACT+AGG | - | chr1.2:3224212-3224231 | None:intergenic | 40.0% | |
CAAAATCGGTGCGAAGAAAT+TGG | - | chr1.2:3223445-3223464 | None:intergenic | 40.0% | |
CAACGGTAAATCACTCTTTG+AGG | + | chr1.2:3224334-3224353 | MS.gene67071:CDS | 40.0% | |
CAATGGTGAATCACTCTTTG+AGG | + | chr1.2:3223220-3223239 | MS.gene67071:CDS | 40.0% | |
CACCATTGTACTTGAAGACA+AGG | - | chr1.2:3223208-3223227 | None:intergenic | 40.0% | |
CATTAAGGGAAAGGTCCAAA+TGG | + | chr1.2:3225666-3225685 | MS.gene67071:intron | 40.0% | |
CATTTGGACCTTTCCCTTAA+TGG | - | chr1.2:3225668-3225687 | None:intergenic | 40.0% | |
CGTTAAAGATCCTGTTGGAT+GGG | - | chr1.2:3225978-3225997 | None:intergenic | 40.0% | |
GAAGAGGGGAATATATAGAG+AGG | + | chr1.2:3225744-3225763 | MS.gene67071:intron | 40.0% | |
GAGAAATACACATGGAAGAG+GGG | + | chr1.2:3225730-3225749 | MS.gene67071:intron | 40.0% | |
GAGAGAAATACACATGGAAG+AGG | + | chr1.2:3225728-3225747 | MS.gene67071:intron | 40.0% | |
GATACAATTTACTCCACGGA+TGG | + | chr1.2:3223137-3223156 | MS.gene67071:CDS | 40.0% | |
GATACTCATAAACCACGCTT+AGG | - | chr1.2:3224831-3224850 | None:intergenic | 40.0% | |
GATACTGTTTACTTCGTGGA+CGG | + | chr1.2:3224251-3224270 | MS.gene67071:CDS | 40.0% | |
GCAATTCCTTTCCACTAATC+CGG | - | chr1.2:3225403-3225422 | None:intergenic | 40.0% | |
GCTTGTAATAAGGAACACTC+TGG | + | chr1.2:3224629-3224648 | MS.gene67071:intron | 40.0% | |
GGCACTTCCTAAAACATTCT+CGG | + | chr1.2:3224142-3224161 | MS.gene67071:intron | 40.0% | |
GTGGAGTTGTGTGGAATATA+GGG | + | chr1.2:3224213-3224232 | MS.gene67071:CDS | 40.0% | |
TACAATTTCTACTGGGCAGA+GGG | - | chr1.2:3226207-3226226 | None:intergenic | 40.0% | |
TAGAAGATTAGGAACACAGG+TGG | - | chr1.2:3225866-3225885 | None:intergenic | 40.0% | |
TCTGAAAGAGCTTTGCTCTA+TGG | - | chr1.2:3226169-3226188 | None:intergenic | 40.0% | |
TGCGAAGAAATTGGGTGAAA+TGG | - | chr1.2:3223436-3223455 | None:intergenic | 40.0% | |
TGGAGATAGTTTCTGTGAGA+AGG | + | chr1.2:3224370-3224389 | MS.gene67071:CDS | 40.0% | |
TTACAATTTCTACTGGGCAG+AGG | - | chr1.2:3226208-3226227 | None:intergenic | 40.0% | |
TTCTTCAAGCATTCACAAGG+AGG | - | chr1.2:3226368-3226387 | None:intergenic | 40.0% | |
TTGTGAGAGAGCTCATGATT+TGG | + | chr1.2:3224604-3224623 | MS.gene67071:intron | 40.0% | |
TTTGACCTTTAGCAGGAAAC+AGG | - | chr1.2:3225517-3225536 | None:intergenic | 40.0% | |
TTTGCTGGAAAAATCATGGG+AGG | + | chr1.2:3223379-3223398 | MS.gene67071:CDS | 40.0% | |
! | ACTGGTTTCCCTCTTATATC+CGG | + | chr1.2:3226045-3226064 | MS.gene67071:intron | 40.0% |
! | GAGCATTGCTTTGTGTAGTT+AGG | + | chr1.2:3225275-3225294 | MS.gene67071:intron | 40.0% |
! | TCACAAGAGTTACCTGCTTT+TGG | - | chr1.2:3224590-3224609 | None:intergenic | 40.0% |
!! | ATGGGTTGAAAGAGCATCAA+GGG | - | chr1.2:3225960-3225979 | None:intergenic | 40.0% |
!! | CGGTTTGCTGGAAAAATCAT+GGG | + | chr1.2:3223376-3223395 | MS.gene67071:CDS | 40.0% |
!! | GATCCTTTTGCCGTTTGTTT+GGG | - | chr1.2:3224513-3224532 | None:intergenic | 40.0% |
!! | TGATCCTTTTGCCGTTTGTT+TGG | - | chr1.2:3224514-3224533 | None:intergenic | 40.0% |
!!! | GGTGAAGCTGGTCTTATTTT+TGG | - | chr1.2:3225939-3225958 | None:intergenic | 40.0% |
AATGCTCAAACCGAACAAGG+GGG | + | chr1.2:3224422-3224441 | MS.gene67071:CDS | 45.0% | |
ACGGCAAAAGGATCAAGAAG+AGG | + | chr1.2:3224519-3224538 | MS.gene67071:CDS | 45.0% | |
ACTTGGGCTTGAGTCACAAA+GGG | + | chr1.2:3225163-3225182 | MS.gene67071:intron | 45.0% | |
AGTGACGATGGACAACATGT+GGG | - | chr1.2:3226028-3226047 | None:intergenic | 45.0% | |
AGTGGAGTTGTGTGGGATAT+AGG | + | chr1.2:3223098-3223117 | MS.gene67071:CDS | 45.0% | |
ATATCCCACACAACTCCACT+AGG | - | chr1.2:3223098-3223117 | None:intergenic | 45.0% | |
CAACTCCACTAGGACCTTTA+AGG | - | chr1.2:3223088-3223107 | None:intergenic | 45.0% | |
CAAGCTCATACTGAACAAGG+AGG | + | chr1.2:3223308-3223327 | MS.gene67071:CDS | 45.0% | |
CAATTTACTCCACGGATGGT+TGG | + | chr1.2:3223141-3223160 | MS.gene67071:CDS | 45.0% | |
CATGGGAGGAAGACATTTAC+TGG | + | chr1.2:3223393-3223412 | MS.gene67071:CDS | 45.0% | |
CCAGCAAATGTGACCCTTAA+AGG | + | chr1.2:3223071-3223090 | MS.gene67071:CDS | 45.0% | |
CTCAGTTGAACAGCTAATGC+TGG | - | chr1.2:3225840-3225859 | None:intergenic | 45.0% | |
GAATGCTCAAACCGAACAAG+GGG | + | chr1.2:3224421-3224440 | MS.gene67071:CDS | 45.0% | |
GACACAGACACTTCTAATGG+CGG | + | chr1.2:3223344-3223363 | MS.gene67071:CDS | 45.0% | |
GAGAGGGAGAGAAATACACA+TGG | + | chr1.2:3225722-3225741 | MS.gene67071:intron | 45.0% | |
GATAGGACCCATTAAGGGAA+AGG | + | chr1.2:3225657-3225676 | MS.gene67071:intron | 45.0% | |
GCTTACCTGTTTCCTGCTAA+AGG | + | chr1.2:3225509-3225528 | MS.gene67071:intron | 45.0% | |
GGAATGCTCAAACCGAACAA+GGG | + | chr1.2:3224420-3224439 | MS.gene67071:CDS | 45.0% | |
GGACAAGCTCATACTGAACA+AGG | + | chr1.2:3223305-3223324 | MS.gene67071:CDS | 45.0% | |
GTGGAGTTGTGTGGGATATA+GGG | + | chr1.2:3223099-3223118 | MS.gene67071:CDS | 45.0% | |
TATAGAGAGGCAGTGTCATG+AGG | + | chr1.2:3225757-3225776 | MS.gene67071:intron | 45.0% | |
TTCCTTTCCACTAATCCGGA+AGG | - | chr1.2:3225399-3225418 | None:intergenic | 45.0% | |
TTGAGCTTGCATTGCACTAG+AGG | + | chr1.2:3223828-3223847 | MS.gene67071:intron | 45.0% | |
TTTCCACTAATCCGGAAGGT+TGG | - | chr1.2:3225395-3225414 | None:intergenic | 45.0% | |
! | CCAGAAAGTGTGACCCTTAA+AGG | + | chr1.2:3224185-3224204 | MS.gene67071:CDS | 45.0% |
! | CCTTTAAGGGTCACACTTTC+TGG | - | chr1.2:3224188-3224207 | None:intergenic | 45.0% |
! | CCTTTAAGGGTCACATTTGC+TGG | - | chr1.2:3223074-3223093 | None:intergenic | 45.0% |
! | TATCAATTGGTCTGACCTGC+CGG | - | chr1.2:3226067-3226086 | None:intergenic | 45.0% |
! | TCTAATGGCGGTGTTGAATG+CGG | + | chr1.2:3223356-3223375 | MS.gene67071:CDS | 45.0% |
! | TGAGAGAGCTCATGATTTGG+TGG | + | chr1.2:3224607-3224626 | MS.gene67071:intron | 45.0% |
! | TGGTTGGCTACTCTAAGTTC+AGG | - | chr1.2:3224970-3224989 | None:intergenic | 45.0% |
!! | AACCTTCCGGATTAGTGGAA+AGG | + | chr1.2:3225394-3225413 | MS.gene67071:intron | 45.0% |
!! | CTTTTGCCGTTTGTTTGGGA+GGG | - | chr1.2:3224509-3224528 | None:intergenic | 45.0% |
!! | GATGGGTTGAAAGAGCATCA+AGG | - | chr1.2:3225961-3225980 | None:intergenic | 45.0% |
!! | GCGGTTTGCTGGAAAAATCA+TGG | + | chr1.2:3223375-3223394 | MS.gene67071:CDS | 45.0% |
AACCGAACAAGGGGGTAGAA+AGG | + | chr1.2:3224430-3224449 | MS.gene67071:CDS | 50.0% | |
AAGAGGGAAACCAGTGACGA+TGG | - | chr1.2:3226040-3226059 | None:intergenic | 50.0% | |
AAGGTCCTAGTGGAGTTGTG+TGG | + | chr1.2:3223090-3223109 | MS.gene67071:CDS | 50.0% | |
ACAAGGAGGTCGCAATGCAA+AGG | + | chr1.2:3223322-3223341 | MS.gene67071:CDS | 50.0% | |
AGGGAAAGGTCCAAATGGAG+AGG | + | chr1.2:3225671-3225690 | MS.gene67071:intron | 50.0% | |
AGGTCCTAGTGGAGTTGTGT+GGG | + | chr1.2:3223091-3223110 | MS.gene67071:CDS | 50.0% | |
ATCAGCCATGAACTGCTCAG+GGG | - | chr1.2:3224480-3224499 | None:intergenic | 50.0% | |
CAAACACTAGAAAGGGGGGA+AGG | - | chr1.2:3223790-3223809 | None:intergenic | 50.0% | |
CAAGCACTCTCCTCTCCATT+TGG | - | chr1.2:3225684-3225703 | None:intergenic | 50.0% | |
CACATGTTGTCCATCGTCAC+TGG | + | chr1.2:3226027-3226046 | MS.gene67071:intron | 50.0% | |
CAGTGACGATGGACAACATG+TGG | - | chr1.2:3226029-3226048 | None:intergenic | 50.0% | |
CATCAGCCATGAACTGCTCA+GGG | - | chr1.2:3224481-3224500 | None:intergenic | 50.0% | |
CCTCCCAAACAAACGGCAAA+AGG | + | chr1.2:3224507-3224526 | MS.gene67071:CDS | 50.0% | |
CTGACCTGCCGGATATAAGA+GGG | - | chr1.2:3226056-3226075 | None:intergenic | 50.0% | |
CTGTTTACTTCGTGGACGGT+TGG | + | chr1.2:3224255-3224274 | MS.gene67071:CDS | 50.0% | |
GAATTGTTGCCAACCATCCG+TGG | - | chr1.2:3223153-3223172 | None:intergenic | 50.0% | |
GACTTGGGCTTGAGTCACAA+AGG | + | chr1.2:3225162-3225181 | MS.gene67071:intron | 50.0% | |
GCTCTTTCAACCCATCCAAC+AGG | + | chr1.2:3225965-3225984 | MS.gene67071:intron | 50.0% | |
GGGAATGCTCAAACCGAACA+AGG | + | chr1.2:3224419-3224438 | MS.gene67071:CDS | 50.0% | |
GTGACCCTTAAAGGTCCTAG+TGG | + | chr1.2:3223080-3223099 | MS.gene67071:CDS | 50.0% | |
GTTTCCCTCTTATATCCGGC+AGG | + | chr1.2:3226049-3226068 | MS.gene67071:intron | 50.0% | |
TCTGACCTGCCGGATATAAG+AGG | - | chr1.2:3226057-3226076 | None:intergenic | 50.0% | |
TGAGCAGTTCATGGCTGATG+CGG | + | chr1.2:3224481-3224500 | MS.gene67071:CDS | 50.0% | |
TGCCTTTCTACCCCCTTGTT+CGG | - | chr1.2:3224435-3224454 | None:intergenic | 50.0% | |
TGTCGATGGTCCACGTATTC+TGG | + | chr1.2:3226707-3226726 | MS.gene67071:CDS | 50.0% | |
TGTTTCCCCTGAGCAGTTCA+TGG | + | chr1.2:3224472-3224491 | MS.gene67071:CDS | 50.0% | |
! | AGTCCAACCTTCCGGATTAG+TGG | + | chr1.2:3225389-3225408 | MS.gene67071:intron | 50.0% |
! | TTCTACTGGGCAGAGGGTAT+TGG | - | chr1.2:3226201-3226220 | None:intergenic | 50.0% |
!! | AAGAGCATCAAGGGTGAAGC+TGG | - | chr1.2:3225951-3225970 | None:intergenic | 50.0% |
!! | CAAATGGAGAGGAGAGTGCT+TGG | + | chr1.2:3225682-3225701 | MS.gene67071:intron | 50.0% |
!! | CCTTTTGCCGTTTGTTTGGG+AGG | - | chr1.2:3224510-3224529 | None:intergenic | 50.0% |
AGAGAGGCAGTGTCATGAGG+AGG | + | chr1.2:3225760-3225779 | MS.gene67071:intron | 55.0% | |
CGAGGAAGACGACCAAAAGC+AGG | + | chr1.2:3224575-3224594 | MS.gene67071:CDS | 55.0% | |
CTTCCTCGCTTAGTCTGGAC+AGG | - | chr1.2:3224563-3224582 | None:intergenic | 55.0% | |
GCATCAGCCATGAACTGCTC+AGG | - | chr1.2:3224482-3224501 | None:intergenic | 55.0% | |
GCGGTTCCCTCCCAAACAAA+CGG | + | chr1.2:3224500-3224519 | MS.gene67071:CDS | 55.0% | |
GGCTACGATGGTAGAGTCAC+CGG | - | chr1.2:3226007-3226026 | None:intergenic | 55.0% | |
GTCGTCTTCCTCGCTTAGTC+TGG | - | chr1.2:3224568-3224587 | None:intergenic | 55.0% | |
TTGACAGTGCTGCCTCTGTG+TGG | - | chr1.2:3226599-3226618 | None:intergenic | 55.0% | |
! | CGGTGTTGAATGCGGTTTGC+TGG | + | chr1.2:3223364-3223383 | MS.gene67071:CDS | 55.0% |
! | GGACAACATGTGGGCTACGA+TGG | - | chr1.2:3226019-3226038 | None:intergenic | 55.0% |
ACGCCTGTCCAGACTAAGCG+AGG | + | chr1.2:3224557-3224576 | MS.gene67071:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 3223029 | 3226728 | 3223029 | ID=MS.gene67071 |
chr1.2 | mRNA | 3223029 | 3226728 | 3223029 | ID=MS.gene67071.t1;Parent=MS.gene67071 |
chr1.2 | exon | 3223029 | 3223475 | 3223029 | ID=MS.gene67071.t1.exon1;Parent=MS.gene67071.t1 |
chr1.2 | CDS | 3223029 | 3223475 | 3223029 | ID=cds.MS.gene67071.t1;Parent=MS.gene67071.t1 |
chr1.2 | exon | 3224143 | 3224596 | 3224143 | ID=MS.gene67071.t1.exon2;Parent=MS.gene67071.t1 |
chr1.2 | CDS | 3224143 | 3224596 | 3224143 | ID=cds.MS.gene67071.t1;Parent=MS.gene67071.t1 |
chr1.2 | exon | 3226604 | 3226728 | 3226604 | ID=MS.gene67071.t1.exon3;Parent=MS.gene67071.t1 |
chr1.2 | CDS | 3226604 | 3226728 | 3226604 | ID=cds.MS.gene67071.t1;Parent=MS.gene67071.t1 |
Gene Sequence |
Protein sequence |