AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67361

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67361.t1 MTR_4g063100 97.638 254 5 1 1 254 1 253 0.0 512
MS.gene67361.t1 MTR_4g063100 95.475 221 9 1 34 254 5 224 9.28e-156 432
MS.gene67361.t1 MTR_4g063100 96.842 190 5 1 65 254 1 189 1.36e-134 377
MS.gene67361.t1 MTR_4g063100 97.093 172 4 1 83 254 6 176 5.02e-121 342
MS.gene67361.t1 MTR_4g063100 97.297 148 3 1 107 254 1 147 3.80e-101 291
MS.gene67361.t1 MTR_2g096380 57.308 260 68 10 1 244 1 233 5.58e-85 253
MS.gene67361.t1 MTR_2g096380 52.915 223 63 9 38 244 18 214 4.70e-60 189
MS.gene67361.t1 MTR_1g045610 65.455 110 38 0 1 110 15 124 3.25e-51 168
MS.gene67361.t1 MTR_1g073170 61.818 110 42 0 1 110 14 123 2.53e-48 160
MS.gene67361.t1 MTR_1g110460 63.208 106 39 0 8 113 27 132 3.30e-48 162
MS.gene67361.t1 MTR_1g086530 58.974 117 45 1 2 115 25 141 6.65e-47 157
MS.gene67361.t1 MTR_1g062940 64.078 103 37 0 8 110 7 109 1.60e-45 152
MS.gene67361.t1 MTR_7g035075 60.377 106 42 0 8 113 15 120 1.81e-45 151
MS.gene67361.t1 MTR_6g006030 60.377 106 42 0 8 113 15 120 2.12e-45 151
MS.gene67361.t1 MTR_1g086510 60.185 108 43 0 8 115 22 129 8.01e-44 149
MS.gene67361.t1 MTR_4g102380 62.136 103 39 0 8 110 13 115 5.88e-42 144
MS.gene67361.t1 MTR_2g096380 48.469 196 59 9 65 244 1 170 1.12e-40 138
MS.gene67361.t1 MTR_4g100720 46.897 145 76 1 3 146 9 153 1.22e-40 138
MS.gene67361.t1 MTR_3g097450 56.364 110 48 0 1 110 6 115 1.26e-40 142
MS.gene67361.t1 MTR_5g078140 39.698 199 102 4 8 192 13 207 3.94e-40 141
MS.gene67361.t1 MTR_8g027345 53.719 121 54 1 9 129 14 132 4.05e-40 140
MS.gene67361.t1 MTR_7g076740 50.370 135 61 3 8 136 13 147 5.80e-40 140
MS.gene67361.t1 MTR_5g029840 59.223 103 42 0 8 110 13 115 7.96e-40 140
MS.gene67361.t1 MTR_7g117730 58.824 102 42 0 9 110 14 115 1.73e-39 137
MS.gene67361.t1 MTR_3g074520 56.604 106 46 0 8 113 13 118 2.90e-39 139
MS.gene67361.t1 MTR_3g065440 59.223 103 42 0 8 110 13 115 3.15e-39 138
MS.gene67361.t1 MTR_4g073420 49.630 135 67 1 7 140 12 146 3.35e-39 137
MS.gene67361.t1 MTR_4g091490 57.282 103 44 0 8 110 14 116 3.49e-39 139
MS.gene67361.t1 MTR_1g112760 54.206 107 49 0 8 114 14 120 5.03e-39 135
MS.gene67361.t1 MTR_1g076150 47.761 134 70 0 8 141 13 146 5.04e-39 136
MS.gene67361.t1 MTR_3g077110 54.206 107 49 0 8 114 13 119 1.01e-38 138
MS.gene67361.t1 MTR_2g089620 57.282 103 44 0 8 110 13 115 1.05e-38 137
MS.gene67361.t1 MTR_2g011660 58.252 103 43 0 8 110 14 116 1.21e-38 137
MS.gene67361.t1 MTR_4g485530 50.376 133 63 2 9 141 14 143 1.21e-38 133
MS.gene67361.t1 MTR_7g096930 43.791 153 76 2 8 160 13 155 1.57e-38 135
MS.gene67361.t1 MTR_5g079670 53.636 110 51 0 1 110 5 114 1.82e-38 134
MS.gene67361.t1 MTR_7g115650 55.340 103 46 0 8 110 13 115 2.40e-38 133
MS.gene67361.t1 MTR_2g099740 53.398 103 48 0 8 110 13 115 4.00e-38 137
MS.gene67361.t1 MTR_3g083540 57.282 103 44 0 8 110 42 144 4.28e-38 135
MS.gene67361.t1 MTR_8g017440 54.369 103 47 0 8 110 13 115 4.76e-38 136
MS.gene67361.t1 MTR_2g033170 58.333 108 45 0 8 115 25 132 5.35e-38 135
MS.gene67361.t1 MTR_8g031360 57.692 104 43 1 8 110 14 117 6.47e-38 134
MS.gene67361.t1 MTR_4g065017 52.586 116 55 0 8 123 18 133 7.12e-38 135
MS.gene67361.t1 MTR_7g011170 57.282 103 44 0 8 110 13 115 1.12e-37 134
MS.gene67361.t1 MTR_4g082290 57.282 103 44 0 8 110 13 115 1.14e-37 136
MS.gene67361.t1 MTR_2g097910 51.613 124 56 1 8 131 21 140 1.17e-37 134
MS.gene67361.t1 MTR_1g085040 55.660 106 47 0 8 113 13 118 1.45e-37 135
MS.gene67361.t1 MTR_3g028740 58.252 103 43 0 8 110 23 125 1.52e-37 135
MS.gene67361.t1 MTR_1g100653 46.565 131 70 0 8 138 13 143 2.43e-37 133
MS.gene67361.t1 MTR_4g478180 54.717 106 48 0 8 113 14 119 2.44e-37 134
MS.gene67361.t1 MTR_1g043080 43.590 156 72 2 8 147 13 168 2.76e-37 132
MS.gene67361.t1 MTR_4g125520 50.407 123 57 1 2 120 7 129 3.05e-37 133
MS.gene67361.t1 MTR_4g082230 56.311 103 45 0 8 110 13 115 3.22e-37 135
MS.gene67361.t1 MTR_0008s0390 56.311 103 45 0 8 110 14 116 3.31e-37 132
MS.gene67361.t1 MTR_0251s0050 56.311 103 45 0 8 110 14 116 3.57e-37 132
MS.gene67361.t1 MTR_7g110830 56.075 107 47 0 8 114 13 119 3.63e-37 134
MS.gene67361.t1 MTR_8g095390 53.846 104 48 0 7 110 12 115 3.64e-37 133
MS.gene67361.t1 MTR_5g007370 53.774 106 49 0 8 113 13 118 4.77e-37 132
MS.gene67361.t1 MTR_2g034790 55.340 103 46 0 8 110 13 115 7.65e-37 132
MS.gene67361.t1 MTR_4g123040 56.481 108 47 0 8 115 25 132 9.24e-37 132
MS.gene67361.t1 MTR_8g017540 44.056 143 73 2 8 145 59 199 9.69e-37 134
MS.gene67361.t1 MTR_2g067420 57.576 99 42 0 8 106 15 113 1.28e-36 132
MS.gene67361.t1 MTR_8g017500 44.056 143 73 2 8 145 13 153 1.36e-36 132
MS.gene67361.t1 MTR_2g089450 48.780 123 63 0 8 130 13 135 1.95e-36 129
MS.gene67361.t1 MTR_4g121460 56.311 103 45 0 8 110 13 115 2.03e-36 132
MS.gene67361.t1 MTR_0008s0280 54.369 103 47 0 7 109 12 114 2.30e-36 129
MS.gene67361.t1 MTR_1g085640 54.206 107 49 0 8 114 13 119 2.93e-36 132
MS.gene67361.t1 MTR_8g017390 51.351 111 53 1 1 110 6 116 3.01e-36 134
MS.gene67361.t1 MTR_4g105130 54.206 107 49 0 8 114 13 119 3.02e-36 132
MS.gene67361.t1 MTR_6g055910 51.852 108 52 0 8 115 15 122 3.20e-36 130
MS.gene67361.t1 MTR_2g064160 48.182 110 57 0 1 110 5 114 5.22e-36 130
MS.gene67361.t1 MTR_6g012690 55.340 103 46 0 8 110 13 115 5.59e-36 131
MS.gene67361.t1 MTR_1g043050 38.674 181 90 3 8 168 13 192 5.85e-36 128
MS.gene67361.t1 MTR_3g011610 55.238 105 47 0 6 110 36 140 8.05e-36 133
MS.gene67361.t1 MTR_3g461490 54.369 103 47 0 8 110 13 115 8.30e-36 130
MS.gene67361.t1 MTR_2g089420 53.211 109 51 0 8 116 12 120 9.30e-36 132
MS.gene67361.t1 MTR_1g021230 38.378 185 92 5 8 192 58 220 9.85e-36 132
MS.gene67361.t1 MTR_0008s0470 54.369 103 47 0 8 110 14 116 1.11e-35 129
MS.gene67361.t1 MTR_1g100667 52.830 106 50 0 8 113 14 119 1.30e-35 128
MS.gene67361.t1 MTR_8g098860 50.909 110 54 0 1 110 6 115 1.45e-35 129
MS.gene67361.t1 MTR_6g009430 54.369 103 47 0 8 110 13 115 1.57e-35 129
MS.gene67361.t1 MTR_8g017340 50.450 111 54 1 1 110 6 116 1.93e-35 132
MS.gene67361.t1 MTR_3g052430 51.887 106 51 0 8 113 42 147 2.04e-35 132
MS.gene67361.t1 MTR_8g042410 53.333 105 49 0 6 110 36 140 3.09e-35 132
MS.gene67361.t1 MTR_3g052450 43.262 141 71 2 8 143 41 177 3.30e-35 132
MS.gene67361.t1 MTR_8g020490 53.922 102 47 0 9 110 10 111 6.98e-35 125
MS.gene67361.t1 MTR_8g017350 50.000 110 54 1 2 110 7 116 8.37e-35 131
MS.gene67361.t1 MTR_7g111290 57.732 97 41 0 8 104 13 109 1.21e-34 128
MS.gene67361.t1 MTR_5g010020 50.476 105 52 0 1 105 6 110 3.95e-34 125
MS.gene67361.t1 MTR_5g079120 51.402 107 52 0 8 114 62 168 8.68e-34 124
MS.gene67361.t1 MTR_7g087130 47.458 118 62 0 8 125 13 130 1.31e-33 124
MS.gene67361.t1 MTR_0063s0090 41.667 132 76 1 8 138 13 144 1.42e-33 121
MS.gene67361.t1 MTR_7g010210 35.023 217 107 3 1 211 6 194 1.45e-33 122
MS.gene67361.t1 MTR_7g010210 51.402 107 52 0 4 110 9 115 1.58e-33 124
MS.gene67361.t1 MTR_2g088170 53.846 104 48 0 8 111 30 133 1.64e-33 126
MS.gene67361.t1 MTR_1g017000 48.148 108 55 1 4 110 9 116 7.04e-33 120
MS.gene67361.t1 MTR_5g078910 50.485 103 51 0 8 110 8 110 9.28e-33 121
MS.gene67361.t1 MTR_8g060940 51.000 100 49 0 8 107 8 107 2.63e-32 119
MS.gene67361.t1 MTR_3g039990 50.485 103 51 0 8 110 14 116 3.85e-32 120
MS.gene67361.t1 MTR_5g078930 46.218 119 61 1 1 116 3 121 6.63e-32 117
MS.gene67361.t1 MTR_5g079290 50.485 103 51 0 8 110 18 120 7.10e-32 118
MS.gene67361.t1 MTR_0197s0010 49.000 100 51 0 11 110 5 104 1.33e-31 116
MS.gene67361.t1 MTR_0140s0030 49.515 103 52 0 8 110 14 116 2.74e-31 118
MS.gene67361.t1 MTR_0489s0020 49.515 103 52 0 8 110 14 116 2.74e-31 118
MS.gene67361.t1 MTR_5g042030 49.515 103 52 0 8 110 8 110 3.46e-31 117
MS.gene67361.t1 MTR_5g079220 49.515 103 52 0 8 110 22 124 3.49e-31 116
MS.gene67361.t1 MTR_3g103570 42.177 147 78 3 8 148 13 158 5.39e-31 117
MS.gene67361.t1 MTR_1g083630 51.456 103 50 0 8 110 13 115 7.40e-31 120
MS.gene67361.t1 MTR_0247s0040 49.074 108 55 0 1 108 1 108 7.58e-31 113
MS.gene67361.t1 MTR_5g078800 50.485 103 51 0 8 110 8 110 1.28e-30 115
MS.gene67361.t1 MTR_6g055910 56.098 82 36 0 34 115 12 93 2.51e-30 114
MS.gene67361.t1 MTR_8g006470 50.467 107 52 1 4 109 7 113 2.63e-30 114
MS.gene67361.t1 MTR_5g078950 48.515 101 52 0 8 108 8 108 3.17e-30 114
MS.gene67361.t1 MTR_5g088640 43.077 130 69 3 7 134 12 138 3.61e-30 114
MS.gene67361.t1 MTR_7g109320 53.398 103 48 0 8 110 13 115 3.74e-30 115
MS.gene67361.t1 MTR_5g088080 43.077 130 69 3 7 134 12 138 4.17e-30 113
MS.gene67361.t1 MTR_5g088150 43.077 130 69 3 7 134 12 138 4.17e-30 113
MS.gene67361.t1 MTR_5g488210 43.077 130 69 3 7 134 12 138 4.17e-30 113
MS.gene67361.t1 MTR_6g012180 49.515 103 52 0 4 106 9 111 4.47e-30 114
MS.gene67361.t1 MTR_6g090405 41.221 131 71 2 8 132 13 143 5.26e-30 113
MS.gene67361.t1 MTR_0001s0360 48.544 103 53 0 8 110 8 110 6.21e-30 112
MS.gene67361.t1 MTR_5g078860 48.544 103 53 0 8 110 8 110 8.58e-30 114
MS.gene67361.t1 MTR_7g017260 46.154 117 59 2 8 120 26 142 9.40e-30 112
MS.gene67361.t1 MTR_4g019370 47.273 110 55 2 9 117 38 145 9.50e-30 114
MS.gene67361.t1 MTR_5g488170 43.077 130 69 3 7 134 12 138 9.84e-30 112
MS.gene67361.t1 MTR_0193s0090 44.538 119 66 0 1 119 1 119 1.62e-29 110
MS.gene67361.t1 MTR_7g102110 47.115 104 54 1 8 110 13 116 2.47e-29 111
MS.gene67361.t1 MTR_1g017140 49.038 104 52 1 8 110 13 116 2.61e-29 113
MS.gene67361.t1 MTR_4g029540 47.458 118 59 2 8 124 11 126 5.48e-29 111
MS.gene67361.t1 MTR_5g014990 48.113 106 50 2 8 110 13 116 5.69e-29 111
MS.gene67361.t1 MTR_5g088610 36.527 167 91 3 7 172 9 161 6.47e-29 112
MS.gene67361.t1 MTR_5g062790 44.348 115 60 2 7 120 9 120 6.80e-29 111
MS.gene67361.t1 MTR_2g095520 43.511 131 67 3 8 131 13 143 2.31e-28 110
MS.gene67361.t1 MTR_4g057635 47.115 104 54 1 8 110 13 116 3.71e-28 109
MS.gene67361.t1 MTR_5g070020 44.094 127 66 3 3 126 116 240 8.38e-28 109
MS.gene67361.t1 MTR_4g094982 44.660 103 54 2 9 110 5 105 1.16e-27 107
MS.gene67361.t1 MTR_5g016510 47.059 102 53 1 9 110 5 105 1.61e-27 107
MS.gene67361.t1 MTR_7g111290 68.657 67 21 0 38 104 1 67 1.86e-27 108
MS.gene67361.t1 MTR_4g097570 49.485 97 48 1 8 103 13 109 2.35e-27 107
MS.gene67361.t1 MTR_7g037260 46.018 113 60 1 9 121 145 256 5.96e-27 107
MS.gene67361.t1 MTR_4g128670 48.485 99 50 1 8 105 13 111 6.00e-27 107
MS.gene67361.t1 MTR_7g061330 49.020 102 51 1 9 110 113 213 6.51e-27 108
MS.gene67361.t1 MTR_7g061330 37.000 100 61 2 9 107 61 159 2.76e-13 69.3
MS.gene67361.t1 MTR_7g461410 49.020 102 51 1 9 110 113 213 6.51e-27 108
MS.gene67361.t1 MTR_7g461410 37.000 100 61 2 9 107 61 159 2.76e-13 69.3
MS.gene67361.t1 MTR_4g097570 49.495 99 46 2 8 103 13 110 1.07e-26 105
MS.gene67361.t1 MTR_7g061330 49.020 102 51 1 9 110 77 177 1.44e-26 107
MS.gene67361.t1 MTR_7g061330 37.000 100 61 2 9 107 25 123 4.56e-13 68.9
MS.gene67361.t1 MTR_3g463400 43.307 127 67 3 9 134 133 255 1.53e-26 107
MS.gene67361.t1 MTR_6g015455 46.078 102 54 1 9 110 5 105 9.13e-26 106
MS.gene67361.t1 MTR_3g101290 44.660 103 54 2 9 110 37 137 1.19e-25 100
MS.gene67361.t1 MTR_5g041570 48.544 103 50 2 9 110 134 234 1.25e-25 104
MS.gene67361.t1 MTR_4g082040 45.217 115 59 3 5 117 101 213 1.94e-25 103
MS.gene67361.t1 MTR_3g045430 43.519 108 61 0 6 113 12 119 3.57e-25 101
MS.gene67361.t1 MTR_5g049190 45.299 117 58 3 9 124 19 130 3.99e-25 100
MS.gene67361.t1 MTR_7g451170 44.248 113 62 1 9 121 191 302 1.39e-24 101
MS.gene67361.t1 MTR_7g450950 40.367 109 64 1 9 117 157 264 1.70e-24 100
MS.gene67361.t1 MTR_4g105660 45.283 106 55 2 6 110 177 280 2.98e-24 100
MS.gene67361.t1 MTR_5g082910 46.000 100 51 2 9 107 19 116 5.82e-24 97.8
MS.gene67361.t1 MTR_6g074860 43.411 129 66 3 9 131 4 131 5.96e-24 96.7
MS.gene67361.t1 MTR_3g077650 42.991 107 60 1 9 115 181 286 2.48e-23 98.2
MS.gene67361.t1 MTR_4g088015 42.478 113 64 1 9 121 221 332 3.73e-23 97.8
MS.gene67361.t1 MTR_6g027370 37.931 145 81 3 5 142 95 237 1.08e-22 95.5
MS.gene67361.t1 MTR_3g110028 41.748 103 57 2 9 110 85 185 1.76e-22 96.7
MS.gene67361.t1 MTR_3g110028 34.314 102 65 2 7 107 31 131 9.11e-12 65.1
MS.gene67361.t1 MTR_5g010650 32.569 218 132 4 9 218 110 320 4.16e-22 95.1
MS.gene67361.t1 MTR_6g027340 40.566 106 58 3 9 113 16 117 6.24e-22 90.5
MS.gene67361.t1 MTR_7g037130 42.478 113 64 1 9 121 145 256 8.47e-22 93.2
MS.gene67361.t1 MTR_3g089045 47.706 109 53 3 9 115 16 122 9.27e-22 92.0
MS.gene67361.t1 MTR_7g035350 41.880 117 67 1 12 128 228 343 1.06e-21 93.6
MS.gene67361.t1 MTR_4g128190 40.777 103 47 2 8 109 12 101 1.39e-21 90.5
MS.gene67361.t1 MTR_6g027360 42.453 106 56 3 9 113 78 179 1.51e-21 91.7
MS.gene67361.t1 MTR_5g007300 51.316 76 37 0 8 83 65 140 1.66e-21 87.8
MS.gene67361.t1 MTR_1g026870 40.777 103 58 2 9 110 85 185 1.73e-21 94.0
MS.gene67361.t1 MTR_1g026870 35.294 102 64 2 7 107 31 131 1.72e-12 67.4
MS.gene67361.t1 MTR_1g057980 35.465 172 84 5 8 155 79 247 2.26e-21 90.9
MS.gene67361.t1 MTR_7g086960 42.342 111 60 3 5 113 85 193 9.61e-21 90.1
MS.gene67361.t1 MTR_1g085880 37.209 129 73 2 2 129 7 128 5.78e-20 85.1
MS.gene67361.t1 MTR_1g085770 37.500 128 72 2 2 128 7 127 2.26e-19 85.9
MS.gene67361.t1 MTR_7g061550 35.849 106 66 1 12 115 10 115 2.31e-18 83.6
MS.gene67361.t1 MTR_5g038910 40.196 102 59 2 12 113 29 128 3.96e-18 83.6
MS.gene67361.t1 MTR_5g038910 40.196 102 59 2 12 113 29 128 4.23e-18 83.2
MS.gene67361.t1 MTR_8g468380 39.216 102 60 2 12 113 25 124 3.72e-16 77.8
MS.gene67361.t1 MTR_6g055910 52.941 51 24 0 65 115 2 52 4.83e-14 69.3
MS.gene67361.t1 MTR_0023s0210 35.526 76 49 0 8 83 8 83 8.40e-13 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67361.t1 AT3G46130 54.510 255 95 8 1 243 3 248 5.34e-79 239
MS.gene67361.t1 AT5G59780 58.009 231 79 6 2 231 3 216 1.70e-77 234
MS.gene67361.t1 AT3G46130 50.917 218 86 8 38 243 8 216 6.67e-57 181
MS.gene67361.t1 AT3G46130 50.926 216 85 8 40 243 20 226 2.75e-56 180
MS.gene67361.t1 AT5G59780 54.922 193 69 6 40 231 20 195 7.27e-56 178
MS.gene67361.t1 AT4G13480 55.474 137 54 1 2 138 1 130 6.85e-51 167
MS.gene67361.t1 AT3G24310 69.903 103 31 0 8 110 19 121 6.09e-50 165
MS.gene67361.t1 AT3G53200 65.741 108 37 0 4 111 6 113 1.24e-49 163
MS.gene67361.t1 AT3G27810 53.623 138 61 1 8 145 21 155 4.67e-49 161
MS.gene67361.t1 AT3G30210 52.632 152 61 1 7 147 27 178 9.15e-49 162
MS.gene67361.t1 AT1G25340 63.208 106 39 0 8 113 19 124 5.82e-47 157
MS.gene67361.t1 AT5G40350 39.450 218 106 3 8 225 18 209 6.34e-47 155
MS.gene67361.t1 AT1G68320 62.264 106 40 0 8 113 20 125 2.54e-46 156
MS.gene67361.t1 AT2G47190 64.078 103 37 0 8 110 21 123 9.63e-46 154
MS.gene67361.t1 AT3G01530 42.197 173 90 3 8 174 26 194 2.24e-44 149
MS.gene67361.t1 AT1G48000 59.804 102 41 0 8 109 33 134 7.45e-44 149
MS.gene67361.t1 AT1G79180 46.405 153 74 1 8 160 15 159 4.52e-43 148
MS.gene67361.t1 AT1G25340 60.377 106 37 1 8 113 19 119 3.47e-42 145
MS.gene67361.t1 AT1G25340 60.377 106 37 1 8 113 19 119 6.51e-42 145
MS.gene67361.t1 AT5G10280 57.547 106 45 0 8 113 13 118 9.61e-41 143
MS.gene67361.t1 AT4G12350 60.000 105 42 0 6 110 11 115 1.12e-40 141
MS.gene67361.t1 AT2G31180 55.660 106 47 0 8 113 13 118 4.77e-40 139
MS.gene67361.t1 AT1G66230 61.165 103 40 0 8 110 13 115 5.32e-40 140
MS.gene67361.t1 AT4G22680 60.194 103 41 0 8 110 13 115 1.02e-39 139
MS.gene67361.t1 AT4G38620 51.538 130 60 1 7 136 12 138 1.36e-39 139
MS.gene67361.t1 AT5G52600 39.572 187 109 1 8 194 13 195 1.68e-39 136
MS.gene67361.t1 AT3G06490 57.407 108 46 0 8 115 20 127 2.62e-39 139
MS.gene67361.t1 AT4G05100 58.252 103 43 0 8 110 14 116 2.71e-39 139
MS.gene67361.t1 AT1G06180 56.311 103 45 0 8 110 13 115 3.20e-39 137
MS.gene67361.t1 AT5G16770 58.491 106 44 0 8 113 13 118 4.56e-39 138
MS.gene67361.t1 AT5G16770 58.491 106 44 0 8 113 13 118 4.56e-39 138
MS.gene67361.t1 AT4G28110 57.282 103 44 0 8 110 13 115 6.72e-39 137
MS.gene67361.t1 AT5G16770 58.491 106 44 0 8 113 13 118 7.00e-39 138
MS.gene67361.t1 AT5G16770 58.491 106 44 0 8 113 13 118 7.00e-39 138
MS.gene67361.t1 AT3G02940 58.491 106 44 0 8 113 13 118 8.65e-39 137
MS.gene67361.t1 AT5G65230 54.717 106 48 0 8 113 13 118 1.12e-38 137
MS.gene67361.t1 AT3G01140 47.826 138 66 1 8 139 13 150 1.16e-38 138
MS.gene67361.t1 AT5G14750 58.252 103 43 0 8 110 17 119 1.27e-38 134
MS.gene67361.t1 AT5G16600 60.194 103 41 0 8 110 13 115 1.37e-38 137
MS.gene67361.t1 AT4G21440 58.252 103 43 0 8 110 13 115 1.42e-38 137
MS.gene67361.t1 AT3G02940 58.491 106 44 0 8 113 13 118 1.49e-38 137
MS.gene67361.t1 AT3G02940 58.491 106 44 0 8 113 13 118 1.49e-38 137
MS.gene67361.t1 AT3G13540 57.009 107 46 0 8 114 24 130 1.59e-38 135
MS.gene67361.t1 AT4G17785 42.945 163 89 1 8 166 14 176 1.66e-38 137
MS.gene67361.t1 AT4G17785 42.945 163 89 1 8 166 14 176 1.73e-38 137
MS.gene67361.t1 AT1G09540 57.547 106 45 0 8 113 13 118 2.19e-38 137
MS.gene67361.t1 AT3G01140 47.826 138 66 1 8 139 56 193 2.23e-38 138
MS.gene67361.t1 AT5G26660 57.282 103 44 0 8 110 13 115 2.69e-38 137
MS.gene67361.t1 AT1G16490 52.336 107 51 0 8 114 15 121 4.56e-38 134
MS.gene67361.t1 AT3G27810 56.604 106 43 1 40 145 4 106 4.86e-38 131
MS.gene67361.t1 AT3G13890 54.369 103 47 0 8 110 13 115 5.08e-38 136
MS.gene67361.t1 AT3G48920 51.538 130 58 1 1 125 12 141 5.47e-38 134
MS.gene67361.t1 AT5G54230 57.282 103 44 0 8 110 13 115 7.50e-38 135
MS.gene67361.t1 AT3G46130 46.073 191 82 8 65 243 1 182 1.23e-37 131
MS.gene67361.t1 AT4G34990 56.731 104 45 0 7 110 12 115 1.43e-37 133
MS.gene67361.t1 AT2G16720 56.863 102 44 0 9 110 14 115 1.48e-37 133
MS.gene67361.t1 AT5G49620 56.481 108 47 0 8 115 27 134 1.54e-37 134
MS.gene67361.t1 AT1G57560 56.311 103 45 0 8 110 13 115 1.68e-37 133
MS.gene67361.t1 AT4G09460 55.769 104 46 0 7 110 12 115 1.78e-37 132
MS.gene67361.t1 AT4G26930 51.852 108 52 0 6 113 18 125 1.84e-37 135
MS.gene67361.t1 AT3G23250 52.991 117 54 1 8 124 13 128 1.87e-37 133
MS.gene67361.t1 AT1G79180 38.172 186 74 2 8 160 15 192 1.97e-37 134
MS.gene67361.t1 AT1G57560 56.311 103 45 0 8 110 13 115 1.98e-37 134
MS.gene67361.t1 AT5G14340 57.282 103 44 0 8 110 25 127 2.19e-37 132
MS.gene67361.t1 AT2G32460 56.604 106 45 1 8 112 7 112 2.63e-37 137
MS.gene67361.t1 AT2G32460 56.604 106 45 1 8 112 19 124 2.71e-37 137
MS.gene67361.t1 AT5G40330 57.282 103 44 0 8 110 13 115 2.97e-37 130
MS.gene67361.t1 AT5G12870 57.282 103 44 0 8 110 19 121 3.98e-37 132
MS.gene67361.t1 AT5G07690 49.612 129 61 1 8 132 13 141 4.48e-37 133
MS.gene67361.t1 AT3G08500 59.223 103 42 0 8 110 31 133 5.06e-37 133
MS.gene67361.t1 AT5G59780 48.810 168 68 6 65 231 1 151 5.08e-37 129
MS.gene67361.t1 AT1G34670 54.717 106 48 0 8 113 13 118 5.12e-37 134
MS.gene67361.t1 AT1G22640 56.863 102 44 0 9 110 14 115 5.75e-37 131
MS.gene67361.t1 AT1G35515 56.863 102 44 0 9 110 14 115 7.11e-37 129
MS.gene67361.t1 AT3G61250 56.311 103 45 0 8 110 13 115 1.07e-36 131
MS.gene67361.t1 AT5G15310 56.311 103 45 0 8 110 13 115 1.14e-36 130
MS.gene67361.t1 AT4G01680 56.311 103 45 0 8 110 13 115 1.28e-36 130
MS.gene67361.t1 AT5G62320 56.364 110 41 1 8 110 14 123 1.60e-36 129
MS.gene67361.t1 AT5G40350 39.247 186 87 3 40 225 5 164 1.65e-36 127
MS.gene67361.t1 AT5G15310 56.311 103 45 0 8 110 13 115 1.87e-36 132
MS.gene67361.t1 AT2G26960 44.025 159 80 3 9 165 22 173 2.21e-36 133
MS.gene67361.t1 AT5G15310 56.311 103 45 0 8 110 13 115 2.33e-36 131
MS.gene67361.t1 AT4G01680 56.311 103 45 0 8 110 13 115 3.08e-36 131
MS.gene67361.t1 AT2G47460 57.282 103 44 0 8 110 13 115 4.06e-36 132
MS.gene67361.t1 AT5G56110 53.211 109 51 0 2 110 7 115 4.07e-36 130
MS.gene67361.t1 AT1G56160 52.427 103 49 0 8 110 15 117 4.85e-36 130
MS.gene67361.t1 AT3G27920 48.333 120 62 0 8 127 15 134 6.08e-36 127
MS.gene67361.t1 AT5G60890 49.550 111 56 0 4 114 9 119 1.64e-35 128
MS.gene67361.t1 AT5G55020 53.846 104 48 0 6 109 25 128 1.95e-35 132
MS.gene67361.t1 AT1G18570 55.340 103 46 0 8 110 14 116 2.49e-35 129
MS.gene67361.t1 AT5G07700 35.565 239 123 7 8 218 13 248 2.54e-35 129
MS.gene67361.t1 AT5G07700 35.565 239 123 7 8 218 13 248 2.54e-35 129
MS.gene67361.t1 AT3G28470 56.122 98 43 0 8 105 13 110 3.18e-35 128
MS.gene67361.t1 AT3G62610 54.369 103 47 0 8 110 13 115 3.50e-35 129
MS.gene67361.t1 AT3G12820 51.456 103 50 0 8 110 15 117 3.91e-35 126
MS.gene67361.t1 AT4G25560 52.830 106 50 0 5 110 8 113 4.09e-35 127
MS.gene67361.t1 AT5G61420 51.402 107 52 0 8 114 13 119 4.14e-35 129
MS.gene67361.t1 AT3G13890 50.000 112 47 1 8 110 13 124 5.42e-35 129
MS.gene67361.t1 AT1G63910 44.882 127 67 1 1 124 6 132 5.60e-35 129
MS.gene67361.t1 AT5G35550 43.939 132 74 0 2 133 9 140 8.41e-35 125
MS.gene67361.t1 AT3G53200 73.611 72 19 0 40 111 9 80 8.64e-35 124
MS.gene67361.t1 AT1G66370 49.180 122 59 1 8 126 9 130 1.55e-34 124
MS.gene67361.t1 AT1G74430 50.467 107 53 0 8 114 13 119 2.05e-34 125
MS.gene67361.t1 AT5G52260 48.438 128 64 1 8 133 13 140 2.77e-34 124
MS.gene67361.t1 AT5G49330 54.369 103 47 0 8 110 13 115 3.34e-34 126
MS.gene67361.t1 AT5G06100 51.923 104 50 0 8 111 33 136 5.01e-34 127
MS.gene67361.t1 AT3G11440 48.148 108 56 0 4 111 38 145 5.76e-34 127
MS.gene67361.t1 AT5G49620 50.000 122 47 1 8 115 27 148 7.31e-34 124
MS.gene67361.t1 AT3G12720 47.573 103 54 0 8 110 23 125 7.85e-34 124
MS.gene67361.t1 AT1G74080 52.941 102 48 0 8 109 13 114 8.08e-34 125
MS.gene67361.t1 AT3G47600 41.892 148 79 1 8 155 13 153 9.46e-34 124
MS.gene67361.t1 AT5G06100 51.923 104 50 0 8 111 33 136 1.50e-33 127
MS.gene67361.t1 AT5G06100 51.923 104 50 0 8 111 33 136 1.50e-33 127
MS.gene67361.t1 AT5G06100 51.923 104 50 0 8 111 33 136 1.50e-33 127
MS.gene67361.t1 AT5G06100 51.923 104 50 0 8 111 33 136 1.50e-33 127
MS.gene67361.t1 AT3G11440 48.148 108 56 0 4 111 38 145 1.74e-33 127
MS.gene67361.t1 AT3G11440 48.148 108 56 0 4 111 38 145 1.74e-33 127
MS.gene67361.t1 AT3G11440 48.148 108 56 0 4 111 38 145 1.74e-33 127
MS.gene67361.t1 AT4G01680 50.435 115 45 1 8 110 13 127 8.31e-33 122
MS.gene67361.t1 AT1G08810 41.727 139 71 1 8 136 13 151 2.04e-32 120
MS.gene67361.t1 AT1G18710 46.729 107 57 0 8 114 13 119 5.98e-32 118
MS.gene67361.t1 AT1G74650 49.074 108 55 0 8 115 13 120 1.09e-31 119
MS.gene67361.t1 AT3G28910 50.485 103 51 0 8 110 13 115 2.47e-31 118
MS.gene67361.t1 AT5G62470 50.485 103 51 0 8 110 13 115 5.05e-31 118
MS.gene67361.t1 AT5G26660 67.606 71 23 0 40 110 14 84 1.57e-30 116
MS.gene67361.t1 AT5G14750 59.756 82 28 1 34 110 4 85 2.44e-30 111
MS.gene67361.t1 AT5G57620 45.946 111 59 1 8 117 13 123 9.59e-30 114
MS.gene67361.t1 AT1G66380 53.398 103 48 0 8 110 9 111 9.67e-30 108
MS.gene67361.t1 AT3G49690 46.429 112 55 2 8 116 13 122 1.28e-29 113
MS.gene67361.t1 AT5G62470 50.485 103 50 1 8 110 13 114 1.64e-29 114
MS.gene67361.t1 AT5G35550 47.222 108 57 0 26 133 36 143 1.98e-29 111
MS.gene67361.t1 AT1G56650 46.774 124 61 1 8 126 9 132 2.63e-29 111
MS.gene67361.t1 AT5G23000 48.077 104 53 1 8 110 13 116 6.56e-29 112
MS.gene67361.t1 AT4G37780 45.536 112 60 1 8 118 13 124 8.13e-29 111
MS.gene67361.t1 AT3G60460 49.565 115 55 2 4 117 8 120 1.33e-28 110
MS.gene67361.t1 AT5G65790 45.536 112 56 2 8 116 13 122 1.35e-28 112
MS.gene67361.t1 AT1G66390 51.456 103 50 0 8 110 9 111 1.61e-28 108
MS.gene67361.t1 AT2G39880 47.664 107 53 2 9 114 50 154 3.64e-28 110
MS.gene67361.t1 AT2G26950 46.729 107 55 1 9 115 18 122 1.05e-27 109
MS.gene67361.t1 AT3G09230 49.020 102 51 1 9 110 55 155 1.19e-27 109
MS.gene67361.t1 AT2G36890 46.226 106 52 2 8 110 13 116 1.05e-26 105
MS.gene67361.t1 AT2G36890 46.226 106 52 2 8 110 54 157 1.69e-26 105
MS.gene67361.t1 AT3G47600 44.828 116 57 1 40 155 39 147 1.77e-26 105
MS.gene67361.t1 AT3G55730 47.619 105 52 2 9 112 56 158 1.84e-26 106
MS.gene67361.t1 AT3G12820 59.155 71 29 0 43 113 2 72 1.84e-26 102
MS.gene67361.t1 AT1G69560 39.597 149 74 5 9 143 107 253 8.42e-26 103
MS.gene67361.t1 AT1G69560 39.597 149 74 5 9 143 123 269 9.05e-26 103
MS.gene67361.t1 AT3G09370 47.059 102 53 1 9 110 135 235 9.84e-26 105
MS.gene67361.t1 AT3G09370 39.000 100 59 2 9 107 83 181 5.55e-13 68.6
MS.gene67361.t1 AT3G09370 47.059 102 53 1 9 110 130 230 1.04e-25 105
MS.gene67361.t1 AT3G09370 39.000 100 59 2 9 107 78 176 6.18e-13 68.6
MS.gene67361.t1 AT3G09370 47.059 102 53 1 9 110 143 243 1.60e-25 105
MS.gene67361.t1 AT3G09370 39.000 100 59 2 9 107 91 189 6.93e-13 68.2
MS.gene67361.t1 AT5G02320 47.059 102 53 1 9 110 127 227 1.69e-25 105
MS.gene67361.t1 AT5G02320 36.000 100 62 2 9 107 75 173 8.10e-12 65.1
MS.gene67361.t1 AT5G02320 47.059 102 53 1 9 110 127 227 1.69e-25 105
MS.gene67361.t1 AT5G02320 36.000 100 62 2 9 107 75 173 8.10e-12 65.1
MS.gene67361.t1 AT5G17800 38.686 137 79 3 2 134 86 221 1.93e-25 102
MS.gene67361.t1 AT1G26780 47.573 103 51 2 9 110 98 198 1.95e-25 101
MS.gene67361.t1 AT1G26780 47.573 103 51 2 9 110 98 198 2.62e-25 102
MS.gene67361.t1 AT5G02320 47.059 102 53 1 9 110 67 167 2.66e-25 104
MS.gene67361.t1 AT5G02320 36.000 100 62 2 9 107 15 113 1.12e-11 64.7
MS.gene67361.t1 AT3G50060 44.118 102 56 1 9 110 6 106 3.14e-25 101
MS.gene67361.t1 AT3G27785 44.444 108 59 1 9 116 189 295 4.10e-25 103
MS.gene67361.t1 AT4G18770 43.590 117 62 2 9 122 217 332 5.61e-25 102
MS.gene67361.t1 AT5G58850 41.129 124 69 3 9 131 105 225 1.28e-24 101
MS.gene67361.t1 AT5G11050 40.833 120 68 2 9 127 105 222 1.50e-24 101
MS.gene67361.t1 AT5G67300 44.118 102 56 1 9 110 6 106 1.56e-24 99.8
MS.gene67361.t1 AT2G23290 46.078 102 54 1 9 110 13 113 1.97e-24 99.8
MS.gene67361.t1 AT1G17950 47.788 113 55 3 9 120 5 114 3.19e-24 97.8
MS.gene67361.t1 AT4G37260 43.396 106 59 1 9 114 13 117 9.90e-24 97.8
MS.gene67361.t1 AT4G33450 39.130 138 76 3 8 138 18 154 1.17e-22 93.6
MS.gene67361.t1 AT5G11510 41.176 102 59 1 9 110 81 181 1.20e-22 97.1
MS.gene67361.t1 AT5G11510 35.294 102 64 2 7 107 27 127 2.53e-12 67.0
MS.gene67361.t1 AT5G11510 41.176 102 59 1 9 110 81 181 1.20e-22 97.1
MS.gene67361.t1 AT5G11510 35.294 102 64 2 7 107 27 127 2.53e-12 67.0
MS.gene67361.t1 AT5G11510 41.176 102 59 1 9 110 81 181 1.20e-22 97.1
MS.gene67361.t1 AT5G11510 35.294 102 64 2 7 107 27 127 2.53e-12 67.0
MS.gene67361.t1 AT5G11510 41.176 102 59 1 9 110 81 181 1.28e-22 97.1
MS.gene67361.t1 AT5G11510 35.294 102 64 2 7 107 27 127 2.43e-12 67.0
MS.gene67361.t1 AT5G11510 41.176 102 59 1 9 110 81 181 1.32e-22 97.1
MS.gene67361.t1 AT5G11510 35.294 102 64 2 7 107 27 127 2.54e-12 66.6
MS.gene67361.t1 AT1G66380 59.211 76 31 0 35 110 3 78 5.37e-22 87.8
MS.gene67361.t1 AT1G73410 46.789 109 55 2 9 116 6 112 5.76e-22 91.7
MS.gene67361.t1 AT3G29020 34.483 145 81 3 4 145 57 190 1.23e-21 90.5
MS.gene67361.t1 AT1G73410 46.789 109 55 2 9 116 6 112 1.57e-21 89.4
MS.gene67361.t1 AT3G29020 34.483 145 81 3 4 145 59 192 1.96e-21 91.3
MS.gene67361.t1 AT1G22640 65.517 58 20 0 53 110 1 58 2.16e-21 89.0
MS.gene67361.t1 AT5G14750 62.069 58 22 0 53 110 1 58 2.65e-21 87.4
MS.gene67361.t1 AT5G14750 62.069 58 22 0 53 110 1 58 2.65e-21 87.4
MS.gene67361.t1 AT2G25230 40.541 111 63 2 9 119 26 133 2.76e-21 89.7
MS.gene67361.t1 AT5G40360 38.261 115 70 1 4 118 153 266 3.10e-21 91.7
MS.gene67361.t1 AT3G23250 55.556 72 31 1 53 124 1 71 9.22e-21 88.2
MS.gene67361.t1 AT4G32730 38.835 103 60 2 9 110 87 187 2.13e-20 90.5
MS.gene67361.t1 AT4G32730 33.333 102 66 2 7 107 33 133 1.30e-11 64.7
MS.gene67361.t1 AT4G32730 38.835 103 60 2 9 110 87 187 2.13e-20 90.5
MS.gene67361.t1 AT4G32730 33.333 102 66 2 7 107 33 133 1.30e-11 64.7
MS.gene67361.t1 AT4G32730 38.835 103 60 2 9 110 87 187 2.13e-20 90.5
MS.gene67361.t1 AT4G32730 33.333 102 66 2 7 107 33 133 1.30e-11 64.7
MS.gene67361.t1 AT4G32730 38.835 103 60 2 9 110 87 187 2.13e-20 90.5
MS.gene67361.t1 AT4G32730 33.333 102 66 2 7 107 33 133 1.30e-11 64.7
MS.gene67361.t1 AT4G32730 38.835 103 60 2 9 110 87 187 2.20e-20 90.5
MS.gene67361.t1 AT4G32730 33.333 102 66 2 7 107 33 133 1.15e-11 64.7
MS.gene67361.t1 AT5G39700 34.400 125 81 1 8 132 55 178 3.21e-19 83.2
MS.gene67361.t1 AT2G37630 38.679 106 63 1 12 115 7 112 5.84e-19 85.5
MS.gene67361.t1 AT2G02820 41.121 107 61 2 12 118 33 137 2.42e-18 84.3
MS.gene67361.t1 AT2G02820 41.121 107 61 2 12 118 33 137 3.01e-18 84.0
MS.gene67361.t1 AT2G02820 41.121 107 61 2 12 118 33 137 3.67e-18 82.8
MS.gene67361.t1 AT1G14350 41.176 102 58 2 12 113 28 127 5.28e-18 83.2
MS.gene67361.t1 AT1G14350 41.176 102 58 2 12 113 28 127 5.28e-18 83.2
MS.gene67361.t1 AT1G71030 49.231 65 33 0 46 110 5 69 5.05e-17 77.0
MS.gene67361.t1 AT1G18960 37.143 105 63 2 9 113 10 111 5.37e-17 79.3
MS.gene67361.t1 AT1G71030 49.231 65 33 0 46 110 19 83 8.06e-17 76.6
MS.gene67361.t1 AT5G40430 38.318 107 62 3 9 115 54 156 2.95e-16 76.3
MS.gene67361.t1 AT4G00540 39.091 110 61 4 8 113 102 209 2.74e-15 75.1
MS.gene67361.t1 AT4G00540 39.091 110 61 4 8 113 100 207 4.51e-15 74.7
MS.gene67361.t1 AT1G66380 45.000 80 44 0 8 87 9 88 4.60e-15 69.7
MS.gene67361.t1 AT3G18100 38.384 99 58 2 7 104 544 640 3.27e-14 72.4
MS.gene67361.t1 AT3G18100 38.384 99 58 2 7 104 383 479 3.61e-14 72.4
MS.gene67361.t1 AT3G18100 38.384 99 58 2 7 104 496 592 4.18e-14 72.0
MS.gene67361.t1 AT3G18100 38.384 99 58 2 7 104 331 427 4.87e-14 71.6
MS.gene67361.t1 AT4G25560 56.522 46 20 0 65 110 2 47 1.60e-13 68.2
MS.gene67361.t1 AT1G14350 38.776 98 44 3 17 113 2 84 8.95e-13 67.8
MS.gene67361.t1 AT1G14350 38.776 98 44 3 17 113 2 84 8.95e-13 67.8

Find 55 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATGGAACTTCACTCTAAA+TGG 0.146424 4.1:+37324249 MS.gene67361:CDS
AGTACCCTTGTTCAATTTCT+TGG 0.198476 4.1:-37325128 None:intergenic
CATAACAAGTGTTTCTTCTT+GGG 0.234566 4.1:-37324231 None:intergenic
TTCACTCTAAATGGGGAAAT+AGG 0.260240 4.1:+37324258 MS.gene67361:CDS
CCATAACAAGTGTTTCTTCT+TGG 0.289211 4.1:-37324232 None:intergenic
GGTTATTTGGTGATCGTAGA+TGG 0.292214 4.1:+37323989 MS.gene67361:CDS
ATCTCATTGTCTGTTCTTCC+TGG 0.294103 4.1:-37324919 None:intergenic
GTTCTTCAACCTGTTCTTGA+TGG 0.305333 4.1:+37325201 MS.gene67361:CDS
GATGATGTAGAAGGCATTAT+AGG 0.306843 4.1:-37325258 None:intergenic
GTAGATCAGGTAAGAGTTGC+AGG 0.324383 4.1:+37324156 MS.gene67361:CDS
GGTACTCAATGGATGATATA+TGG 0.324488 4.1:+37325145 MS.gene67361:CDS
GAGAATAGTAATAATTTATC+TGG 0.338505 4.1:+37325234 MS.gene67361:CDS
ATCTTGCCACGTTTGAGATC+AGG 0.342275 4.1:-37324203 None:intergenic
CAAGGGAACACATTTCTAAC+TGG 0.364614 4.1:+37325384 MS.gene67361:CDS
ACAATGAGATTAAGAATTAC+TGG 0.365207 4.1:+37324932 MS.gene67361:CDS
GTTCCCTTGTTGATCATAGA+AGG 0.376985 4.1:-37325370 None:intergenic
CTTGTTCAATTTCTTGGACT+TGG 0.379831 4.1:-37325122 None:intergenic
TATGGAACTTCACTCTAAAT+GGG 0.390577 4.1:+37324250 MS.gene67361:CDS
CAACTAGAAGATTGATGATC+AGG 0.393403 4.1:-37325021 None:intergenic
AGAACAAGAAGATTACAAAT+TGG 0.394597 4.1:+37323954 MS.gene67361:CDS
TAATCTTCTTGTTCTGTCCA+TGG 0.396833 4.1:-37323946 None:intergenic
GTTGTAGGTTTGAGTAGATC+AGG 0.410818 4.1:+37324143 MS.gene67361:intron
TTCTTCTTCAGACTCTTTGT+TGG 0.419812 4.1:-37325094 None:intergenic
CCAAGAAGAAACACTTGTTA+TGG 0.427820 4.1:+37324232 MS.gene67361:CDS
AAGATGTTATTCCCTCCTAT+TGG 0.427899 4.1:+37325333 MS.gene67361:CDS
TTCATATTTAGATCCATTGT+GGG 0.445170 4.1:+37325290 MS.gene67361:CDS
TCACTAGTTCCATCAAGAAC+AGG 0.449699 4.1:-37325210 None:intergenic
TCACAAGAAATAAGCAGAAA+AGG 0.460369 4.1:+37323922 MS.gene67361:CDS
TAATCCCATGATGATGTAGA+AGG 0.467172 4.1:-37325267 None:intergenic
TAAGAGTTGCAGGTTACGTT+GGG 0.469904 4.1:+37324166 MS.gene67361:CDS
ATAACAAGTGTTTCTTCTTG+GGG 0.472612 4.1:-37324230 None:intergenic
GTTATTTGGTGATCGTAGAT+GGG 0.492828 4.1:+37323990 MS.gene67361:CDS
TAATGCCTTCTACATCATCA+TGG 0.505668 4.1:+37325262 MS.gene67361:CDS
TCTTGCCACGTTTGAGATCA+GGG 0.506211 4.1:-37324202 None:intergenic
TTTAGATCCATTGTGGGTGA+TGG 0.511419 4.1:+37325296 MS.gene67361:CDS
ATTCATATTTAGATCCATTG+TGG 0.525981 4.1:+37325289 MS.gene67361:CDS
AATTGAACAAGGGTACTCAA+TGG 0.554035 4.1:+37325134 MS.gene67361:CDS
AAATATTGGTCACCAATAGG+AGG 0.555227 4.1:-37325345 None:intergenic
AAATAAGCAGAAAAGGTCCA+TGG 0.566374 4.1:+37323929 MS.gene67361:CDS
CAAGTCCAAGAAATTGAACA+AGG 0.573106 4.1:+37325123 MS.gene67361:CDS
GTAAGAGTTGCAGGTTACGT+TGG 0.576254 4.1:+37324165 MS.gene67361:CDS
TCTTCATCCATCACCCACAA+TGG 0.577626 4.1:-37325303 None:intergenic
AATGCCTTCTACATCATCAT+GGG 0.580960 4.1:+37325263 MS.gene67361:CDS
TTTCCTTCTATGATCAACAA+GGG 0.589914 4.1:+37325367 MS.gene67361:CDS
AATATTGGTCACCAATAGGA+GGG 0.618360 4.1:-37325344 None:intergenic
CTCGAATAGTAACCATGGTG+TGG 0.629282 4.1:+37325059 MS.gene67361:CDS
AGAATTGCGAGAAGACTACC+AGG 0.634342 4.1:+37324901 MS.gene67361:CDS
ATGGAACTTCACTCTAAATG+GGG 0.635977 4.1:+37324251 MS.gene67361:CDS
CATTTCTCGAATAGTAACCA+TGG 0.643534 4.1:+37325054 MS.gene67361:CDS
GTTACTATTCGAGAAATGCG+AGG 0.661814 4.1:-37325049 None:intergenic
CTTCACCCTGATCTCAAACG+TGG 0.676208 4.1:+37324197 MS.gene67361:CDS
TCAGGTGACGATGAAATCGA+AGG 0.678422 4.1:-37325003 None:intergenic
AAGTCCAAGAAATTGAACAA+GGG 0.687184 4.1:+37325124 MS.gene67361:CDS
ATGAGATTAAGAATTACTGG+AGG 0.710072 4.1:+37324935 MS.gene67361:CDS
AAGCATGTGAGTCCACACCA+TGG 0.742880 4.1:-37325071 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATTCTTGAATAGATT+TGG + chr4.1:37324819-37324838 MS.gene67361:intron 15.0%
!! AATAAATAGGTATGCTTATA+AGG + chr4.1:37324057-37324076 MS.gene67361:intron 20.0%
!! ATAAATAGGTATGCTTATAA+GGG + chr4.1:37324058-37324077 MS.gene67361:intron 20.0%
!! GAGAATAGTAATAATTTATC+TGG + chr4.1:37325234-37325253 MS.gene67361:CDS 20.0%
!!! GATTTGGTTTTGAATTTTTT+TGG + chr4.1:37324835-37324854 MS.gene67361:intron 20.0%
! AAACAGAAAAACATGGTTAA+AGG - chr4.1:37324113-37324132 None:intergenic 25.0%
! ACAATGAGATTAAGAATTAC+TGG + chr4.1:37324932-37324951 MS.gene67361:CDS 25.0%
! AGAACAAGAAGATTACAAAT+TGG + chr4.1:37323954-37323973 MS.gene67361:CDS 25.0%
! ATTCATATTTAGATCCATTG+TGG + chr4.1:37325289-37325308 MS.gene67361:CDS 25.0%
! GATCATAGAAGGAAAAATAT+TGG - chr4.1:37325362-37325381 None:intergenic 25.0%
! TAAAAGACATGAGATGTATT+TGG - chr4.1:37324353-37324372 None:intergenic 25.0%
! TGTATTTGGATATATGAAGT+AGG - chr4.1:37324339-37324358 None:intergenic 25.0%
! TTCATATTTAGATCCATTGT+GGG + chr4.1:37325290-37325309 MS.gene67361:CDS 25.0%
!! ACAAATTGGCATATTTTGTA+GGG + chr4.1:37323968-37323987 MS.gene67361:CDS 25.0%
!! ATCTCATGTCTTTTAAATTG+CGG + chr4.1:37324358-37324377 MS.gene67361:intron 25.0%
!! TACAAATTGGCATATTTTGT+AGG + chr4.1:37323967-37323986 MS.gene67361:CDS 25.0%
AAGTCCAAGAAATTGAACAA+GGG + chr4.1:37325124-37325143 MS.gene67361:CDS 30.0%
AGAATACTTTATGATTGCAG+CGG - chr4.1:37324386-37324405 None:intergenic 30.0%
ATAACAAGTGTTTCTTCTTG+GGG - chr4.1:37324233-37324252 None:intergenic 30.0%
ATGAGATTAAGAATTACTGG+AGG + chr4.1:37324935-37324954 MS.gene67361:CDS 30.0%
CATAACAAGTGTTTCTTCTT+GGG - chr4.1:37324234-37324253 None:intergenic 30.0%
CCTTGTCAAATATACGAAAT+GGG + chr4.1:37324558-37324577 MS.gene67361:intron 30.0%
GAAAAATATTGGTCACCAAT+AGG - chr4.1:37325351-37325370 None:intergenic 30.0%
TATGGAACTTCACTCTAAAT+GGG + chr4.1:37324250-37324269 MS.gene67361:CDS 30.0%
TCACAAGAAATAAGCAGAAA+AGG + chr4.1:37323922-37323941 MS.gene67361:CDS 30.0%
TCCTTGTCAAATATACGAAA+TGG + chr4.1:37324557-37324576 MS.gene67361:intron 30.0%
TTATGGAACTTCACTCTAAA+TGG + chr4.1:37324249-37324268 MS.gene67361:CDS 30.0%
TTTCCTTCTATGATCAACAA+GGG + chr4.1:37325367-37325386 MS.gene67361:CDS 30.0%
! AAATTGGATTGGATTCTCTA+GGG + chr4.1:37324424-37324443 MS.gene67361:intron 30.0%
! GATTTTATAGCAAAGGTTTC+AGG + chr4.1:37324012-37324031 MS.gene67361:CDS 30.0%
! GCATATTTTGTAGGGTTATT+TGG + chr4.1:37323976-37323995 MS.gene67361:CDS 30.0%
! TAAAGTATTCTTGAGAGCTA+CGG + chr4.1:37324395-37324414 MS.gene67361:intron 30.0%
! TAGATGGGATTTTATAGCAA+AGG + chr4.1:37324005-37324024 MS.gene67361:CDS 30.0%
! TTTTCCTTCTATGATCAACA+AGG + chr4.1:37325366-37325385 MS.gene67361:CDS 30.0%
AAATAAGCAGAAAAGGTCCA+TGG + chr4.1:37323929-37323948 MS.gene67361:CDS 35.0%
AAATATTGGTCACCAATAGG+AGG - chr4.1:37325348-37325367 None:intergenic 35.0%
AAGATGTTATTCCCTCCTAT+TGG + chr4.1:37325333-37325352 MS.gene67361:CDS 35.0%
AATATGGTGCTCAAACAGTA+AGG + chr4.1:37324451-37324470 MS.gene67361:intron 35.0%
AATATTGGTCACCAATAGGA+GGG - chr4.1:37325347-37325366 None:intergenic 35.0%
AATGCCTTCTACATCATCAT+GGG + chr4.1:37325263-37325282 MS.gene67361:CDS 35.0%
AGTACCCTTGTTCAATTTCT+TGG - chr4.1:37325131-37325150 None:intergenic 35.0%
ATGGAACTTCACTCTAAATG+GGG + chr4.1:37324251-37324270 MS.gene67361:CDS 35.0%
CAAGTCCAAGAAATTGAACA+AGG + chr4.1:37325123-37325142 MS.gene67361:CDS 35.0%
CATTTCTCGAATAGTAACCA+TGG + chr4.1:37325054-37325073 MS.gene67361:CDS 35.0%
CCATAACAAGTGTTTCTTCT+TGG - chr4.1:37324235-37324254 None:intergenic 35.0%
CCCATTTCGTATATTTGACA+AGG - chr4.1:37324561-37324580 None:intergenic 35.0%
CTTGTTCAATTTCTTGGACT+TGG - chr4.1:37325125-37325144 None:intergenic 35.0%
GAATACTTTATGATTGCAGC+GGG - chr4.1:37324385-37324404 None:intergenic 35.0%
GACACACATGAGAAAAAAGA+GGG + chr4.1:37324957-37324976 MS.gene67361:CDS 35.0%
GATCTTCTATAGCTGTGTTA+TGG - chr4.1:37324539-37324558 None:intergenic 35.0%
GCAAGGACTTGAATTATCTA+CGG - chr4.1:37324681-37324700 None:intergenic 35.0%
GGATATATGAAGTAGGTAGT+AGG - chr4.1:37324332-37324351 None:intergenic 35.0%
GGTACTCAATGGATGATATA+TGG + chr4.1:37325145-37325164 MS.gene67361:CDS 35.0%
GTAGGTAGTAGGAAAAGAAA+AGG - chr4.1:37324321-37324340 None:intergenic 35.0%
GTGTGAGAAACAGAAAAACA+TGG - chr4.1:37324120-37324139 None:intergenic 35.0%
TAATCTTCTTGTTCTGTCCA+TGG - chr4.1:37323949-37323968 None:intergenic 35.0%
TAATGCCTTCTACATCATCA+TGG + chr4.1:37325262-37325281 MS.gene67361:CDS 35.0%
TACGGTCAAAGAAATTGGAT+TGG + chr4.1:37324413-37324432 MS.gene67361:intron 35.0%
TCGCAGTGACATAAAAATTG+CGG + chr4.1:37324750-37324769 MS.gene67361:intron 35.0%
TTCACTCTAAATGGGGAAAT+AGG + chr4.1:37324258-37324277 MS.gene67361:CDS 35.0%
TTCTTCTTCAGACTCTTTGT+TGG - chr4.1:37325097-37325116 None:intergenic 35.0%
! CAACTAGAAGATTGATGATC+AGG - chr4.1:37325024-37325043 None:intergenic 35.0%
! CCAAGAAGAAACACTTGTTA+TGG + chr4.1:37324232-37324251 MS.gene67361:CDS 35.0%
! GAAATTGGATTGGATTCTCT+AGG + chr4.1:37324423-37324442 MS.gene67361:intron 35.0%
! GTTATTTGGTGATCGTAGAT+GGG + chr4.1:37323990-37324009 MS.gene67361:CDS 35.0%
! TAATCCCATGATGATGTAGA+AGG - chr4.1:37325270-37325289 None:intergenic 35.0%
! TGTTTCTCACACTTTGTTGT+AGG + chr4.1:37324128-37324147 MS.gene67361:intron 35.0%
!! AATTGAACAAGGGTACTCAA+TGG + chr4.1:37325134-37325153 MS.gene67361:CDS 35.0%
!! GATGATGTAGAAGGCATTAT+AGG - chr4.1:37325261-37325280 None:intergenic 35.0%
AATTCAAGTCCTTGCTCAGA+TGG + chr4.1:37324686-37324705 MS.gene67361:intron 40.0%
ACTTGAATTATCTACGGCAG+CGG - chr4.1:37324675-37324694 None:intergenic 40.0%
AGAGCTACGGTCAAAGAAAT+TGG + chr4.1:37324408-37324427 MS.gene67361:intron 40.0%
ATCTCATTGTCTGTTCTTCC+TGG - chr4.1:37324922-37324941 None:intergenic 40.0%
ATTCAAGTCCTTGCTCAGAT+GGG + chr4.1:37324687-37324706 MS.gene67361:intron 40.0%
CAAGGGAACACATTTCTAAC+TGG + chr4.1:37325384-37325403 MS.gene67361:CDS 40.0%
GGACACACATGAGAAAAAAG+AGG + chr4.1:37324956-37324975 MS.gene67361:CDS 40.0%
GTTACTATTCGAGAAATGCG+AGG - chr4.1:37325052-37325071 None:intergenic 40.0%
GTTCCCTTGTTGATCATAGA+AGG - chr4.1:37325373-37325392 None:intergenic 40.0%
GTTCTTCAACCTGTTCTTGA+TGG + chr4.1:37325201-37325220 MS.gene67361:CDS 40.0%
GTTGTAGGTTTGAGTAGATC+AGG + chr4.1:37324143-37324162 MS.gene67361:intron 40.0%
TAAGAGTTGCAGGTTACGTT+GGG + chr4.1:37324166-37324185 MS.gene67361:CDS 40.0%
TCACTAGTTCCATCAAGAAC+AGG - chr4.1:37325213-37325232 None:intergenic 40.0%
TGATGAACAAGATTGCGTTG+TGG + chr4.1:37324719-37324738 MS.gene67361:intron 40.0%
TTTAGATCCATTGTGGGTGA+TGG + chr4.1:37325296-37325315 MS.gene67361:CDS 40.0%
! GGTTATTTGGTGATCGTAGA+TGG + chr4.1:37323989-37324008 MS.gene67361:CDS 40.0%
!! AAAGGTTTCAGGTTTGAAGG+TGG + chr4.1:37324023-37324042 MS.gene67361:intron 40.0%
!! AGCAAAGGTTTCAGGTTTGA+AGG + chr4.1:37324020-37324039 MS.gene67361:intron 40.0%
AGAATTGCGAGAAGACTACC+AGG + chr4.1:37324901-37324920 MS.gene67361:CDS 45.0%
AGCTGTGTGATGATTGCAGA+TGG + chr4.1:37324875-37324894 MS.gene67361:intron 45.0%
AGTACAGTGCTGCAACTGTA+AGG + chr4.1:37324596-37324615 MS.gene67361:intron 45.0%
CTCGAATAGTAACCATGGTG+TGG + chr4.1:37325059-37325078 MS.gene67361:CDS 45.0%
GGCGGGAGAGAGTAATAAAT+AGG + chr4.1:37324044-37324063 MS.gene67361:intron 45.0%
GTAAGAGTTGCAGGTTACGT+TGG + chr4.1:37324165-37324184 MS.gene67361:CDS 45.0%
GTAGATCAGGTAAGAGTTGC+AGG + chr4.1:37324156-37324175 MS.gene67361:CDS 45.0%
TCAGGTGACGATGAAATCGA+AGG - chr4.1:37325006-37325025 None:intergenic 45.0%
TCTTCATCCATCACCCACAA+TGG - chr4.1:37325306-37325325 None:intergenic 45.0%
TGGTGCTCAAACAGTAAGGA+CGG + chr4.1:37324455-37324474 MS.gene67361:intron 45.0%
TTGCGGTGTCTGATCTAGTT+TGG + chr4.1:37324767-37324786 MS.gene67361:intron 45.0%
TTTATGTCACTGCGACTCTG+AGG - chr4.1:37324745-37324764 None:intergenic 45.0%
! ATCTTGCCACGTTTGAGATC+AGG - chr4.1:37324206-37324225 None:intergenic 45.0%
! TCTTGCCACGTTTGAGATCA+GGG - chr4.1:37324205-37324224 None:intergenic 45.0%
!! GATTCTCTAGGGCTGCAATA+TGG + chr4.1:37324435-37324454 MS.gene67361:intron 45.0%
!!! AATTTTTATAAAAATACAAA+AGG - chr4.1:37324807-37324826 None:intergenic 5.0%
AAGCATGTGAGTCCACACCA+TGG - chr4.1:37325074-37325093 None:intergenic 50.0%
CTTCACCCTGATCTCAAACG+TGG + chr4.1:37324197-37324216 MS.gene67361:CDS 50.0%
TGCATCATCCCATCTGAGCA+AGG - chr4.1:37324698-37324717 None:intergenic 50.0%
!! GGTTTCAGGTTTGAAGGTGG+CGG + chr4.1:37324026-37324045 MS.gene67361:intron 50.0%
!! GTTATGGTGCTGCAACTGTG+AGG - chr4.1:37324523-37324542 None:intergenic 50.0%
!! GTTTCAGGTTTGAAGGTGGC+GGG + chr4.1:37324027-37324046 MS.gene67361:intron 50.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 37323916 37325410 37323916 ID=MS.gene67361
chr4.1 mRNA 37323916 37325410 37323916 ID=MS.gene67361.t1;Parent=MS.gene67361
chr4.1 exon 37323916 37324033 37323916 ID=MS.gene67361.t1.exon1;Parent=MS.gene67361.t1
chr4.1 CDS 37323916 37324033 37323916 ID=cds.MS.gene67361.t1;Parent=MS.gene67361.t1
chr4.1 exon 37324150 37324279 37324150 ID=MS.gene67361.t1.exon2;Parent=MS.gene67361.t1
chr4.1 CDS 37324150 37324279 37324150 ID=cds.MS.gene67361.t1;Parent=MS.gene67361.t1
chr4.1 exon 37324894 37325410 37324894 ID=MS.gene67361.t1.exon3;Parent=MS.gene67361.t1
chr4.1 CDS 37324894 37325410 37324894 ID=cds.MS.gene67361.t1;Parent=MS.gene67361.t1
Gene Sequence

>MS.gene67361

ATGGTTTCACAAGAAATAAGCAGAAAAGGTCCATGGACAGAACAAGAAGATTACAAATTGGCATATTTTGTAGGGTTATTTGGTGATCGTAGATGGGATTTTATAGCAAAGGTTTCAGGTTTGAAGGTGGCGGGAGAGAGTAATAAATAGGTATGCTTATAAGGGCATGCTGAATTATAATAGAAGCATTAATTCCTTTAACCATGTTTTTCTGTTTCTCACACTTTGTTGTAGGTTTGAGTAGATCAGGTAAGAGTTGCAGGTTACGTTGGGTTAATTATCTTCACCCTGATCTCAAACGTGGCAAGATGACACCCCAAGAAGAAACACTTGTTATGGAACTTCACTCTAAATGGGGAAATAGGTTTGAGACTGAATATTATCAAGCAGACTCACTATTTTCCTTTTCTTTTCCTACTACCTACTTCATATATCCAAATACATCTCATGTCTTTTAAATTGCGGTCCCGCTGCAATCATAAAGTATTCTTGAGAGCTACGGTCAAAGAAATTGGATTGGATTCTCTAGGGCTGCAATATGGTGCTCAAACAGTAAGGACGGTTAGATTTATTGAGAATTTTTTCTCTCTCAAAGTCTAATAGTCCTCACAGTTGCAGCACCATAACACAGCTATAGAAGATCCTTGTCAAATATACGAAATGGGATCTTCTACAATTGCAGTACAGTGCTGCAACTGTAAGGACTATTAGATTTATAGAGAAATTTTATCTCTCTAAATCTAATAGTCTCTACTACCGCTGCCGTAGATAATTCAAGTCCTTGCTCAGATGGGATGATGCAGTGATGAACAAGATTGCGTTGTGGCCTCAGAGTCGCAGTGACATAAAAATTGCGGTGTCTGATCTAGTTTGGCGTCGCATACTTTTCCTTTTGTATTTTTATAAAAATTCTTGAATAGATTTGGTTTTGAATTTTTTTGGTTACTCAAGTTTAATATAGCTGTGTGATGATTGCAGATGGTCAAGAATTGCGAGAAGACTACCAGGAAGAACAGACAATGAGATTAAGAATTACTGGAGGACACACATGAGAAAAAAGAGGGCACAAGAGAAAAAACATGCAACACCTTCGATTTCATCGTCACCTGATCATCAATCTTCTAGTTGTCAATCCTCGCATTTCTCGAATAGTAACCATGGTGTGGACTCACATGCTTCCAACAAAGAGTCTGAAGAAGAAAATTACCAAGTCCAAGAAATTGAACAAGGGTACTCAATGGATGATATATGGAAAGATATTGCTATGTCTGAAGATGACATCAATGTTCTTCAACCTGTTCTTGATGGAACTAGTGAAGAGAATAGTAATAATTTATCTGGTCCTATAATGCCTTCTACATCATCATGGGATTATTCATATTTAGATCCATTGTGGGTGATGGATGAAGAAGAAAGCAAGATGTTATTCCCTCCTATTGGTGACCAATATTTTTCCTTCTATGATCAACAAGGGAACACATTTCTAACTGGTTAA
Protein sequence

>MS.gene67361.t1

MVSQEISRKGPWTEQEDYKLAYFVGLFGDRRWDFIAKVSGLSRSGKSCRLRWVNYLHPDLKRGKMTPQEETLVMELHSKWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKRAQEKKHATPSISSSPDHQSSSCQSSHFSNSNHGVDSHASNKESEEENYQVQEIEQGYSMDDIWKDIAMSEDDINVLQPVLDGTSEENSNNLSGPIMPSTSSWDYSYLDPLWVMDEEESKMLFPPIGDQYFSFYDQQGNTFLTG