Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67389.t1 | GAU29118.1 | 81.1 | 774 | 92 | 5 | 1 | 774 | 1 | 720 | 0.00E+00 | 1238 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67389.t1 | Q9SZL8 | 34.4 | 683 | 432 | 9 | 43 | 713 | 59 | 737 | 2.4e-107 | 391.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67389.t1 | A0A2Z6MBM1 | 81.1 | 774 | 92 | 5 | 1 | 774 | 1 | 720 | 0.0e+00 | 1238.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene67389.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67389.t1 | MTR_0402s0040 | 68.500 | 200 | 62 | 1 | 30 | 229 | 2 | 200 | 4.14e-87 | 284 |
| MS.gene67389.t1 | MTR_0402s0040 | 47.397 | 365 | 108 | 8 | 414 | 777 | 200 | 481 | 6.11e-81 | 268 |
| MS.gene67389.t1 | MTR_5g015480 | 66.667 | 174 | 52 | 2 | 10 | 183 | 18 | 185 | 5.15e-66 | 220 |
| MS.gene67389.t1 | MTR_6g017200 | 64.925 | 134 | 43 | 1 | 20 | 149 | 20 | 153 | 7.30e-51 | 175 |
| MS.gene67389.t1 | MTR_1g057920 | 69.421 | 121 | 37 | 0 | 23 | 143 | 3 | 123 | 2.80e-50 | 172 |
| MS.gene67389.t1 | MTR_7g113010 | 60.000 | 160 | 50 | 1 | 20 | 179 | 423 | 568 | 1.48e-49 | 184 |
| MS.gene67389.t1 | MTR_2g070590 | 71.681 | 113 | 32 | 0 | 45 | 157 | 8 | 120 | 1.48e-48 | 167 |
| MS.gene67389.t1 | MTR_1g086270 | 81.707 | 82 | 15 | 0 | 349 | 430 | 1 | 82 | 3.82e-43 | 152 |
| MS.gene67389.t1 | MTR_6g051425 | 31.973 | 294 | 178 | 6 | 61 | 335 | 24 | 314 | 1.13e-42 | 158 |
| MS.gene67389.t1 | MTR_0137s0040 | 68.269 | 104 | 33 | 0 | 19 | 122 | 1 | 104 | 8.37e-40 | 142 |
| MS.gene67389.t1 | MTR_0558s0020 | 34.008 | 247 | 144 | 5 | 68 | 295 | 50 | 296 | 4.66e-39 | 147 |
| MS.gene67389.t1 | MTR_8g446020 | 35.795 | 176 | 112 | 1 | 121 | 295 | 81 | 256 | 6.70e-33 | 128 |
| MS.gene67389.t1 | MTR_6g090505 | 37.714 | 175 | 108 | 1 | 121 | 294 | 56 | 230 | 1.48e-31 | 127 |
| MS.gene67389.t1 | MTR_1g070355 | 33.471 | 242 | 153 | 5 | 53 | 289 | 71 | 309 | 3.77e-31 | 129 |
| MS.gene67389.t1 | MTR_4g035820 | 32.414 | 290 | 174 | 10 | 25 | 299 | 42 | 324 | 1.88e-26 | 115 |
| MS.gene67389.t1 | MTR_1g050985 | 80.000 | 60 | 12 | 0 | 124 | 183 | 39 | 98 | 1.60e-25 | 101 |
| MS.gene67389.t1 | MTR_7g074790 | 39.429 | 175 | 84 | 4 | 51 | 224 | 7 | 160 | 2.90e-25 | 105 |
| MS.gene67389.t1 | MTR_1g083640 | 29.289 | 239 | 145 | 6 | 52 | 266 | 44 | 282 | 7.73e-25 | 105 |
| MS.gene67389.t1 | MTR_5g039760 | 35.922 | 206 | 102 | 6 | 48 | 250 | 4 | 182 | 6.46e-23 | 97.4 |
| MS.gene67389.t1 | MTR_0291s0060 | 60.274 | 73 | 29 | 0 | 32 | 104 | 13 | 85 | 6.63e-22 | 91.3 |
| MS.gene67389.t1 | MTR_7g446520 | 31.174 | 247 | 148 | 6 | 57 | 300 | 91 | 318 | 1.79e-21 | 97.1 |
| MS.gene67389.t1 | MTR_4g102720 | 33.333 | 171 | 78 | 3 | 51 | 221 | 4 | 138 | 3.38e-21 | 93.6 |
| MS.gene67389.t1 | MTR_4g067290 | 43.089 | 123 | 61 | 4 | 41 | 158 | 40 | 158 | 5.05e-21 | 93.2 |
| MS.gene67389.t1 | MTR_4g067290 | 43.089 | 123 | 61 | 4 | 41 | 158 | 40 | 158 | 5.85e-21 | 93.2 |
| MS.gene67389.t1 | MTR_4g067290 | 43.089 | 123 | 61 | 4 | 41 | 158 | 60 | 178 | 9.41e-21 | 93.2 |
| MS.gene67389.t1 | MTR_4g067290 | 43.089 | 123 | 61 | 4 | 41 | 158 | 58 | 176 | 9.55e-21 | 92.8 |
| MS.gene67389.t1 | MTR_4g067290 | 43.089 | 123 | 61 | 4 | 41 | 158 | 60 | 178 | 1.06e-20 | 92.8 |
| MS.gene67389.t1 | MTR_4g067290 | 43.089 | 123 | 61 | 4 | 41 | 158 | 100 | 218 | 1.34e-20 | 93.6 |
| MS.gene67389.t1 | MTR_5g076070 | 26.638 | 229 | 158 | 5 | 60 | 283 | 59 | 282 | 9.23e-19 | 87.8 |
| MS.gene67389.t1 | MTR_2g098920 | 42.991 | 107 | 55 | 3 | 54 | 158 | 80 | 182 | 1.03e-18 | 87.4 |
| MS.gene67389.t1 | MTR_0337s0040 | 30.405 | 148 | 102 | 1 | 114 | 260 | 75 | 222 | 1.42e-18 | 85.9 |
| MS.gene67389.t1 | MTR_7g061980 | 41.026 | 117 | 65 | 3 | 50 | 165 | 6 | 119 | 1.02e-17 | 80.1 |
| MS.gene67389.t1 | MTR_7g446480 | 33.333 | 174 | 113 | 2 | 130 | 301 | 140 | 312 | 1.19e-16 | 82.0 |
| MS.gene67389.t1 | MTR_1g091013 | 67.857 | 56 | 18 | 0 | 67 | 122 | 14 | 69 | 1.73e-16 | 75.1 |
| MS.gene67389.t1 | MTR_7g446510 | 32.571 | 175 | 115 | 2 | 130 | 302 | 155 | 328 | 3.66e-16 | 80.9 |
| MS.gene67389.t1 | MTR_6g022070 | 28.161 | 174 | 120 | 1 | 349 | 522 | 1 | 169 | 3.12e-15 | 78.2 |
| MS.gene67389.t1 | MTR_3g006370 | 41.818 | 110 | 50 | 3 | 54 | 156 | 50 | 152 | 8.23e-15 | 75.1 |
| MS.gene67389.t1 | MTR_1g008290 | 33.333 | 138 | 86 | 3 | 112 | 248 | 9 | 141 | 1.40e-14 | 72.0 |
| MS.gene67389.t1 | MTR_2g014100 | 25.110 | 227 | 147 | 5 | 30 | 233 | 15 | 241 | 1.50e-14 | 74.7 |
| MS.gene67389.t1 | MTR_5g045210 | 32.540 | 126 | 82 | 1 | 586 | 708 | 20 | 145 | 1.54e-13 | 70.5 |
| MS.gene67389.t1 | MTR_2g099430 | 40.449 | 89 | 51 | 1 | 77 | 165 | 26 | 112 | 1.75e-13 | 67.8 |
| MS.gene67389.t1 | MTR_1g019850 | 30.872 | 149 | 96 | 2 | 44 | 192 | 60 | 201 | 2.05e-13 | 71.2 |
| MS.gene67389.t1 | MTR_3g450850 | 24.696 | 247 | 172 | 6 | 60 | 294 | 53 | 297 | 2.74e-13 | 72.4 |
| MS.gene67389.t1 | MTR_2g098880 | 38.393 | 112 | 64 | 3 | 54 | 162 | 61 | 170 | 1.43e-12 | 68.9 |
| MS.gene67389.t1 | MTR_2g098880 | 38.393 | 112 | 64 | 3 | 54 | 162 | 73 | 182 | 1.57e-12 | 68.9 |
| MS.gene67389.t1 | MTR_6g022080 | 26.543 | 162 | 116 | 2 | 52 | 211 | 83 | 243 | 8.48e-12 | 66.6 |
| MS.gene67389.t1 | MTR_0337s0060 | 25.556 | 270 | 143 | 8 | 445 | 709 | 21 | 237 | 9.84e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67389.t1 | AT4G38180 | 36.573 | 607 | 370 | 8 | 42 | 636 | 58 | 661 | 1.32e-124 | 392 |
| MS.gene67389.t1 | AT4G15090 | 31.019 | 677 | 433 | 11 | 50 | 714 | 47 | 701 | 8.89e-100 | 327 |
| MS.gene67389.t1 | AT4G15090 | 31.019 | 677 | 433 | 11 | 50 | 714 | 47 | 701 | 8.89e-100 | 327 |
| MS.gene67389.t1 | AT4G15090 | 31.019 | 677 | 433 | 11 | 50 | 714 | 47 | 701 | 8.89e-100 | 327 |
| MS.gene67389.t1 | AT4G15090 | 31.019 | 677 | 433 | 11 | 50 | 714 | 47 | 701 | 8.89e-100 | 327 |
| MS.gene67389.t1 | AT4G15090 | 31.019 | 677 | 433 | 11 | 50 | 714 | 47 | 701 | 8.89e-100 | 327 |
| MS.gene67389.t1 | AT3G22170 | 31.429 | 630 | 377 | 13 | 49 | 654 | 59 | 657 | 9.29e-91 | 303 |
| MS.gene67389.t1 | AT3G22170 | 31.429 | 630 | 377 | 13 | 49 | 654 | 59 | 657 | 9.29e-91 | 303 |
| MS.gene67389.t1 | AT1G76320 | 32.085 | 614 | 370 | 14 | 58 | 654 | 1 | 584 | 3.90e-90 | 297 |
| MS.gene67389.t1 | AT1G76320 | 31.974 | 613 | 372 | 14 | 58 | 654 | 1 | 584 | 7.81e-90 | 298 |
| MS.gene67389.t1 | AT1G76320 | 31.974 | 613 | 372 | 14 | 58 | 654 | 1 | 584 | 7.81e-90 | 298 |
| MS.gene67389.t1 | AT1G76320 | 31.974 | 613 | 372 | 14 | 58 | 654 | 1 | 584 | 8.12e-90 | 298 |
| MS.gene67389.t1 | AT2G27110 | 31.833 | 622 | 381 | 14 | 54 | 667 | 49 | 635 | 4.27e-86 | 291 |
| MS.gene67389.t1 | AT2G27110 | 31.833 | 622 | 381 | 14 | 54 | 667 | 49 | 635 | 4.27e-86 | 291 |
| MS.gene67389.t1 | AT3G06250 | 28.617 | 622 | 382 | 12 | 54 | 666 | 190 | 758 | 4.17e-76 | 262 |
| MS.gene67389.t1 | AT3G06250 | 28.617 | 622 | 382 | 12 | 54 | 666 | 190 | 758 | 4.17e-76 | 262 |
| MS.gene67389.t1 | AT3G06250 | 28.617 | 622 | 382 | 12 | 54 | 666 | 190 | 758 | 4.17e-76 | 262 |
| MS.gene67389.t1 | AT2G27110 | 34.086 | 443 | 277 | 8 | 233 | 667 | 55 | 490 | 1.05e-75 | 259 |
| MS.gene67389.t1 | AT2G32250 | 27.850 | 614 | 388 | 10 | 58 | 666 | 42 | 605 | 3.69e-75 | 259 |
| MS.gene67389.t1 | AT2G32250 | 27.850 | 614 | 388 | 10 | 58 | 666 | 1 | 564 | 7.30e-75 | 258 |
| MS.gene67389.t1 | AT2G32250 | 27.850 | 614 | 388 | 10 | 58 | 666 | 42 | 605 | 8.10e-75 | 259 |
| MS.gene67389.t1 | AT2G32250 | 27.850 | 614 | 388 | 10 | 58 | 666 | 42 | 605 | 8.10e-75 | 259 |
| MS.gene67389.t1 | AT2G32250 | 27.850 | 614 | 388 | 10 | 58 | 666 | 1 | 564 | 8.80e-75 | 258 |
| MS.gene67389.t1 | AT2G32250 | 27.850 | 614 | 388 | 10 | 58 | 666 | 42 | 605 | 9.07e-75 | 259 |
| MS.gene67389.t1 | AT2G32250 | 27.850 | 614 | 388 | 10 | 58 | 666 | 42 | 605 | 9.07e-75 | 259 |
| MS.gene67389.t1 | AT2G32250 | 27.850 | 614 | 388 | 10 | 58 | 666 | 42 | 605 | 9.07e-75 | 259 |
| MS.gene67389.t1 | AT1G10240 | 27.484 | 644 | 422 | 13 | 45 | 663 | 39 | 662 | 8.33e-74 | 254 |
| MS.gene67389.t1 | AT1G10240 | 27.484 | 644 | 422 | 13 | 45 | 663 | 39 | 662 | 8.33e-74 | 254 |
| MS.gene67389.t1 | AT5G18960 | 28.846 | 624 | 381 | 14 | 54 | 666 | 211 | 782 | 2.35e-72 | 252 |
| MS.gene67389.t1 | AT5G18960 | 28.846 | 624 | 381 | 14 | 54 | 666 | 211 | 782 | 2.35e-72 | 252 |
| MS.gene67389.t1 | AT4G38170 | 29.694 | 458 | 298 | 8 | 233 | 679 | 21 | 465 | 9.75e-64 | 223 |
| MS.gene67389.t1 | AT4G19990 | 27.723 | 606 | 373 | 10 | 59 | 642 | 26 | 588 | 2.84e-62 | 223 |
| MS.gene67389.t1 | AT4G19990 | 27.734 | 631 | 385 | 11 | 59 | 664 | 26 | 610 | 3.44e-62 | 223 |
| MS.gene67389.t1 | AT4G19990 | 27.734 | 631 | 385 | 11 | 59 | 664 | 26 | 610 | 3.44e-62 | 223 |
| MS.gene67389.t1 | AT4G19990 | 27.707 | 628 | 389 | 10 | 59 | 664 | 26 | 610 | 3.96e-62 | 223 |
| MS.gene67389.t1 | AT4G19990 | 27.707 | 628 | 389 | 10 | 59 | 664 | 26 | 610 | 3.96e-62 | 223 |
| MS.gene67389.t1 | AT4G19990 | 27.723 | 606 | 373 | 10 | 59 | 642 | 40 | 602 | 3.99e-62 | 223 |
| MS.gene67389.t1 | AT5G28530 | 26.904 | 617 | 417 | 15 | 35 | 629 | 37 | 641 | 7.19e-62 | 221 |
| MS.gene67389.t1 | AT5G28530 | 26.966 | 623 | 405 | 16 | 35 | 629 | 37 | 637 | 1.68e-61 | 220 |
| MS.gene67389.t1 | AT5G28530 | 26.966 | 623 | 405 | 16 | 35 | 629 | 37 | 637 | 1.68e-61 | 220 |
| MS.gene67389.t1 | AT1G80010 | 27.521 | 585 | 377 | 12 | 54 | 609 | 95 | 661 | 1.68e-57 | 209 |
| MS.gene67389.t1 | AT1G52520 | 28.744 | 581 | 360 | 17 | 53 | 607 | 84 | 636 | 1.79e-57 | 209 |
| MS.gene67389.t1 | AT4G19990 | 27.797 | 590 | 365 | 11 | 85 | 664 | 15 | 553 | 2.89e-54 | 199 |
| MS.gene67389.t1 | AT5G28530 | 24.053 | 607 | 384 | 15 | 35 | 629 | 37 | 578 | 9.76e-41 | 159 |
| MS.gene67389.t1 | AT5G28530 | 24.144 | 613 | 372 | 16 | 35 | 629 | 37 | 574 | 2.39e-40 | 158 |
| MS.gene67389.t1 | AT3G59470 | 46.667 | 105 | 54 | 2 | 54 | 158 | 70 | 172 | 2.05e-20 | 92.0 |
| MS.gene67389.t1 | AT3G59470 | 46.667 | 105 | 54 | 2 | 54 | 158 | 70 | 172 | 2.05e-20 | 92.0 |
| MS.gene67389.t1 | AT3G59470 | 46.667 | 105 | 54 | 2 | 54 | 158 | 82 | 184 | 2.94e-20 | 91.7 |
| MS.gene67389.t1 | AT2G43280 | 43.925 | 107 | 52 | 3 | 54 | 156 | 22 | 124 | 1.76e-15 | 76.3 |
| MS.gene67389.t1 | AT4G12850 | 36.508 | 126 | 73 | 3 | 54 | 179 | 11 | 129 | 2.87e-15 | 73.9 |
| MS.gene67389.t1 | AT3G07500 | 42.857 | 105 | 59 | 1 | 54 | 158 | 33 | 136 | 4.53e-15 | 75.5 |
| MS.gene67389.t1 | AT4G12850 | 39.252 | 107 | 61 | 2 | 54 | 160 | 11 | 113 | 1.30e-14 | 72.0 |
| MS.gene67389.t1 | AT4G12850 | 39.252 | 107 | 61 | 2 | 54 | 160 | 11 | 113 | 3.95e-14 | 72.0 |
| MS.gene67389.t1 | AT2G43280 | 43.478 | 92 | 44 | 3 | 69 | 156 | 2 | 89 | 1.75e-12 | 66.6 |
Find 126 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAAGTTTCTTGGCTATT+TGG | 0.127787 | 4.1:-37700341 | None:intergenic |
| AATTTCTCCTTCCATGATTT+AGG | 0.199189 | 4.1:-37702384 | None:intergenic |
| GAAATTCTTCATATTCTTCT+TGG | 0.203404 | 4.1:-37701786 | None:intergenic |
| ATAAACGATTATGGATATTT+TGG | 0.203454 | 4.1:+37701019 | MS.gene67389:CDS |
| AGCAAATAACAAATATCTTT+TGG | 0.204370 | 4.1:+37700981 | MS.gene67389:CDS |
| AATAAGGAGAGGAAAGTAAT+AGG | 0.229152 | 4.1:+37701868 | MS.gene67389:CDS |
| CTCACCATTTGTAATTGATA+TGG | 0.238596 | 4.1:-37702277 | None:intergenic |
| TGGAAAACCTAAAGAAAATT+TGG | 0.238961 | 4.1:+37702443 | MS.gene67389:CDS |
| TTGAAATTGATGGCTCATTA+AGG | 0.253482 | 4.1:-37700268 | None:intergenic |
| AGAATTTCCTTCGAACTAAA+AGG | 0.257081 | 4.1:+37700855 | MS.gene67389:CDS |
| GAAATTGGATAGAAAGAAAA+AGG | 0.272410 | 4.1:+37702401 | MS.gene67389:CDS |
| AGCAGAAATGGGAGCTCTTT+TGG | 0.284940 | 4.1:-37701357 | None:intergenic |
| TTTGGTATTCGTCGAGAATA+TGG | 0.306820 | 4.1:+37700449 | MS.gene67389:CDS |
| GTTATGCCTCAAACATTTCA+TGG | 0.308775 | 4.1:+37701280 | MS.gene67389:CDS |
| GAAGAATATGAAGAATTTCT+AGG | 0.312241 | 4.1:+37701790 | MS.gene67389:CDS |
| TTTGAAGTCAGATATAAATT+TGG | 0.313176 | 4.1:+37701600 | MS.gene67389:CDS |
| TAGTTCGAAGGAAATTCTTA+TGG | 0.319083 | 4.1:-37700850 | None:intergenic |
| TATAATCTACAAAAGTTTCT+TGG | 0.325632 | 4.1:-37700349 | None:intergenic |
| TAAATCATGGAAGGAGAAAT+TGG | 0.331287 | 4.1:+37702386 | MS.gene67389:CDS |
| CCTTCAACAATTGAAATTGA+TGG | 0.337251 | 4.1:-37700278 | None:intergenic |
| GCACAGATGATAAACGATTA+TGG | 0.341323 | 4.1:+37701010 | MS.gene67389:CDS |
| GAAAGGACATCATATTGATT+TGG | 0.350662 | 4.1:+37702062 | MS.gene67389:CDS |
| TTGTTGAAGGTGTAGAGAAA+TGG | 0.358317 | 4.1:+37700291 | MS.gene67389:CDS |
| AATGAGTATAGCAGGAGAAT+TGG | 0.360693 | 4.1:+37700425 | MS.gene67389:CDS |
| TTTATGTCTTGACTCATAAT+CGG | 0.369202 | 4.1:-37701683 | None:intergenic |
| TGGCAAAATACTTTCATGAA+TGG | 0.373730 | 4.1:-37700321 | None:intergenic |
| CTTCAAAATCCGAGCAGAAA+TGG | 0.375608 | 4.1:-37701369 | None:intergenic |
| ACGTGCTTTACACCCAGTTC+TGG | 0.377947 | 4.1:-37700585 | None:intergenic |
| AAACAATTCCTTCCTTTCAA+TGG | 0.386086 | 4.1:+37701164 | MS.gene67389:CDS |
| CGACCATTGGGAGTATTTGT+TGG | 0.391913 | 4.1:+37701088 | MS.gene67389:CDS |
| TGTTGAAGGTGTAGAGAAAT+GGG | 0.392498 | 4.1:+37700292 | MS.gene67389:CDS |
| TATACATGATGATGACAATA+AGG | 0.396194 | 4.1:+37701852 | MS.gene67389:CDS |
| GTCTATTCCACCAACTTGCT+TGG | 0.399516 | 4.1:-37700804 | None:intergenic |
| ATAGGTGGTTCACATGCCTT+AGG | 0.401174 | 4.1:-37701333 | None:intergenic |
| GTTAGACTCTTCATAGACTT+TGG | 0.404170 | 4.1:-37702187 | None:intergenic |
| TACAACATACAAGACAAATA+AGG | 0.410215 | 4.1:+37701060 | MS.gene67389:CDS |
| AAAATCCTTTGGCTTTAATC+CGG | 0.414261 | 4.1:-37700768 | None:intergenic |
| TGCATAAAGAATTTGAATGA+TGG | 0.425164 | 4.1:+37701817 | MS.gene67389:CDS |
| CGTACTGATGGAGAATCAAT+TGG | 0.425368 | 4.1:+37702240 | MS.gene67389:CDS |
| ATACTCATTATAAAATTCAT+AGG | 0.433466 | 4.1:-37700411 | None:intergenic |
| TTCAAAATCCGAGCAGAAAT+GGG | 0.435563 | 4.1:-37701368 | None:intergenic |
| ACATACTCATGAAAATCCTT+TGG | 0.439521 | 4.1:-37700779 | None:intergenic |
| TCTAGAGCAGAAACCAGAAC+TGG | 0.439558 | 4.1:+37700572 | MS.gene67389:CDS |
| TTATACACCACACTTGGAAA+TGG | 0.441214 | 4.1:+37700367 | MS.gene67389:CDS |
| TATAGCAGGAGAATTGGATT+TGG | 0.445248 | 4.1:+37700431 | MS.gene67389:CDS |
| ATAAGGAGAGGAAAGTAATA+GGG | 0.446156 | 4.1:+37701869 | MS.gene67389:CDS |
| ACCACCTCTTTGTCATTCCA+CGG | 0.452949 | 4.1:+37700072 | MS.gene67389:CDS |
| GGTCAGGAAGTAATCGAGAT+AGG | 0.453653 | 4.1:+37702040 | MS.gene67389:CDS |
| CCATCAATTTCAATTGTTGA+AGG | 0.458479 | 4.1:+37700278 | MS.gene67389:CDS |
| ACTCAACAATTGAGTAAAAG+TGG | 0.464087 | 4.1:-37702798 | None:intergenic |
| AGGTGGTGGACGGCCAGAAT+TGG | 0.466416 | 4.1:-37700056 | None:intergenic |
| GTAATAAACGTCCTAAATCA+TGG | 0.467780 | 4.1:+37702373 | MS.gene67389:CDS |
| AAGATGGAGAAAACCAATTC+TGG | 0.469862 | 4.1:+37700043 | None:intergenic |
| TCAAATAACCATTGAAAGGA+AGG | 0.471148 | 4.1:-37701172 | None:intergenic |
| TGAAAGTCATAAAAGAAAGA+AGG | 0.477032 | 4.1:-37700944 | None:intergenic |
| CAAGATAGTTGAGGATATGT+TGG | 0.484150 | 4.1:+37702209 | MS.gene67389:CDS |
| AGGGAGCTTCGAGGATCAAA+AGG | 0.489800 | 4.1:+37701888 | MS.gene67389:CDS |
| TCCTAAGTTGAAAATTAAGA+AGG | 0.489936 | 4.1:+37701708 | MS.gene67389:CDS |
| CATTTCATGGACTATGCACT+TGG | 0.490965 | 4.1:+37701293 | MS.gene67389:CDS |
| AAGATTCTCGTGCTTTAAAG+AGG | 0.497851 | 4.1:+37700508 | MS.gene67389:CDS |
| GTTGGTGGAATAGACATAGT+TGG | 0.498391 | 4.1:+37700812 | MS.gene67389:CDS |
| TAAAAGTGGGACTTGTATGA+AGG | 0.499833 | 4.1:-37702784 | None:intergenic |
| GTTTCCATATCAATTACAAA+TGG | 0.502177 | 4.1:+37702273 | MS.gene67389:CDS |
| AATAAGGATTATCGACCATT+GGG | 0.502732 | 4.1:+37701076 | MS.gene67389:CDS |
| AAATAAGGATTATCGACCAT+TGG | 0.506629 | 4.1:+37701075 | MS.gene67389:CDS |
| GCATAAAGAATTTGAATGAT+GGG | 0.507372 | 4.1:+37701818 | MS.gene67389:CDS |
| ATGGTCAAATTAACAAATAG+AGG | 0.510113 | 4.1:+37702132 | MS.gene67389:CDS |
| ATAATGTTTCTGATGATTCG+TGG | 0.513389 | 4.1:+37701458 | MS.gene67389:CDS |
| CATAGTCCATGAAATGTTTG+AGG | 0.517904 | 4.1:-37701286 | None:intergenic |
| TGGACAAGAGAAGCAAGGTC+AGG | 0.530771 | 4.1:+37702024 | MS.gene67389:CDS |
| TGTAGATTATACACCACACT+TGG | 0.533801 | 4.1:+37700361 | MS.gene67389:CDS |
| TCACTGAGGTATGGTGAAGT+AGG | 0.535157 | 4.1:+37700884 | MS.gene67389:CDS |
| AAGATGAATTTCTGAACGCA+TGG | 0.536411 | 4.1:+37701416 | MS.gene67389:CDS |
| AACTGGGTGTAAAGCACGTA+TGG | 0.543457 | 4.1:+37700589 | MS.gene67389:CDS |
| ATTGTGTTGGCTGATGAATC+CGG | 0.546006 | 4.1:+37700749 | MS.gene67389:CDS |
| TTGGCTAATAAGCGTACTGA+TGG | 0.547149 | 4.1:+37702228 | MS.gene67389:CDS |
| AAAGCTTCAGTAACAGATGA+TGG | 0.552141 | 4.1:+37702752 | MS.gene67389:CDS |
| AGGAATCATTCACTGAGGTA+TGG | 0.556258 | 4.1:+37700875 | MS.gene67389:CDS |
| TAGTCATGCTTTGAAAGTGT+TGG | 0.559284 | 4.1:+37701954 | MS.gene67389:CDS |
| TAGGTGGTTCACATGCCTTA+GGG | 0.559416 | 4.1:-37701332 | None:intergenic |
| AAAAGTGGGACTTGTATGAA+GGG | 0.559635 | 4.1:-37702783 | None:intergenic |
| TCAAAATGCAGCAATGGCCA+AGG | 0.565175 | 4.1:+37701246 | MS.gene67389:CDS |
| GGAAATGGAGTTTGAATCTG+AGG | 0.566587 | 4.1:+37700382 | MS.gene67389:CDS |
| CCACCTCTTTGTCATTCCAC+GGG | 0.567560 | 4.1:+37700073 | MS.gene67389:CDS |
| AACAGATCAAAATGCAGCAA+TGG | 0.567887 | 4.1:+37701240 | MS.gene67389:CDS |
| CACTTCGAAAGAGTTGTGAA+TGG | 0.569131 | 4.1:+37701637 | MS.gene67389:CDS |
| GCATTATTGATGTATTTCAA+AGG | 0.569965 | 4.1:+37700908 | MS.gene67389:CDS |
| TTTGTTAATTTGACCATCCG+AGG | 0.571395 | 4.1:-37702126 | None:intergenic |
| AAAGAGCTCCCATTTCTGCT+CGG | 0.571791 | 4.1:+37701360 | MS.gene67389:CDS |
| GCACGTATGCTTGTTCAAGC+CGG | 0.574035 | 4.1:+37701730 | MS.gene67389:CDS |
| TCAAACTCCATTTCCAAGTG+TGG | 0.576119 | 4.1:-37700374 | None:intergenic |
| CAATGATTTATGTCCTCGGA+TGG | 0.584590 | 4.1:+37702113 | MS.gene67389:CDS |
| AGTTTCAAATAACCATTGAA+AGG | 0.585078 | 4.1:-37701176 | None:intergenic |
| CGTACCCTGGTGGTTGAAGA+AGG | 0.585881 | 4.1:-37700676 | None:intergenic |
| CGCTTGAGTATATAGTGCGA+AGG | 0.588820 | 4.1:-37702000 | None:intergenic |
| GAAAGTAATAGGGAGCTTCG+AGG | 0.589174 | 4.1:+37701879 | MS.gene67389:CDS |
| CTCAACAATTGAGTAAAAGT+GGG | 0.589530 | 4.1:-37702797 | None:intergenic |
| CATAACTAGAGAAATAGCCT+TGG | 0.598382 | 4.1:-37701263 | None:intergenic |
| AGATTCTCGTGCTTTAAAGA+GGG | 0.598984 | 4.1:+37700509 | MS.gene67389:CDS |
| GTGGAATGACAAAGAGGTGG+TGG | 0.601159 | 4.1:-37700070 | None:intergenic |
| CGCACTATATACTCAAGCGA+TGG | 0.601753 | 4.1:+37702004 | MS.gene67389:CDS |
| AATCACCTTCTTCAACCACC+AGG | 0.604960 | 4.1:+37700671 | MS.gene67389:CDS |
| AAAGTGGGACTTGTATGAAG+GGG | 0.605496 | 4.1:-37702782 | None:intergenic |
| TAAACGTCCTAAATCATGGA+AGG | 0.606769 | 4.1:+37702377 | MS.gene67389:CDS |
| ACAAGCATCACAAATTGTGT+TGG | 0.607468 | 4.1:+37700736 | MS.gene67389:CDS |
| TAGACATAGTTGGTTATACA+AGG | 0.611692 | 4.1:+37700822 | MS.gene67389:CDS |
| TGCTTTAAAGAGGGAAAGCG+AGG | 0.618222 | 4.1:+37700518 | MS.gene67389:CDS |
| TGTCGTAAATTTGAGACACA+TGG | 0.618799 | 4.1:+37701922 | MS.gene67389:CDS |
| GATACAATGATTTATGTCCT+CGG | 0.618907 | 4.1:+37702109 | MS.gene67389:CDS |
| TATGTGTCCAAGCAAGTTGG+TGG | 0.620761 | 4.1:+37700797 | MS.gene67389:CDS |
| GGAAGTAATCGAGATAGGAA+AGG | 0.629938 | 4.1:+37702045 | MS.gene67389:CDS |
| AGTCCAACAAATACTCCCAA+TGG | 0.630456 | 4.1:-37701091 | None:intergenic |
| CTAGAGCAGAAACCAGAACT+GGG | 0.631153 | 4.1:+37700573 | MS.gene67389:CDS |
| ATATAAGAGAAAATGCCCTA+AGG | 0.636935 | 4.1:+37701317 | MS.gene67389:CDS |
| CGAATCATATGAACGTACCC+TGG | 0.641374 | 4.1:-37700689 | None:intergenic |
| TGAATCCGGATTAAAGCCAA+AGG | 0.646687 | 4.1:+37700763 | MS.gene67389:CDS |
| AATGACAAAGAGGTGGTGGA+CGG | 0.652235 | 4.1:-37700066 | None:intergenic |
| AGCGATGGACAAGAGAAGCA+AGG | 0.654037 | 4.1:+37702019 | MS.gene67389:CDS |
| TTACCCGTGGAATGACAAAG+AGG | 0.668554 | 4.1:-37700076 | None:intergenic |
| ATGATGATGACAATAAGGAG+AGG | 0.685843 | 4.1:+37701857 | MS.gene67389:CDS |
| CCCGTGGAATGACAAAGAGG+TGG | 0.685949 | 4.1:-37700073 | None:intergenic |
| ATCACCTTCTTCAACCACCA+GGG | 0.688985 | 4.1:+37700672 | MS.gene67389:CDS |
| ATCATATGAACGTACCCTGG+TGG | 0.694249 | 4.1:-37700686 | None:intergenic |
| GAGTATGTGTCCAAGCAAGT+TGG | 0.694904 | 4.1:+37700794 | MS.gene67389:CDS |
| AGAGTCTAACAAGATAGTTG+AGG | 0.708912 | 4.1:+37702200 | MS.gene67389:CDS |
| CTAAAAGGAATCATTCACTG+AGG | 0.744388 | 4.1:+37700870 | MS.gene67389:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTCATTATAAAATTCAT+AGG | - | chr4.1:37700414-37700433 | None:intergenic | 15.0% |
| !! | TATAATCTACAAAAGTTTCT+TGG | - | chr4.1:37700352-37700371 | None:intergenic | 20.0% |
| !! | TTTGTAGTATTAACTAAAAG+AGG | - | chr4.1:37700184-37700203 | None:intergenic | 20.0% |
| !!! | AATAAGTATTTTGTTAAACC+AGG | - | chr4.1:37700126-37700145 | None:intergenic | 20.0% |
| !!! | AATTTTATAATGAGTATAGC+AGG | + | chr4.1:37700417-37700436 | MS.gene67389:CDS | 20.0% |
| !!! | AGCAAATAACAAATATCTTT+TGG | + | chr4.1:37700981-37701000 | MS.gene67389:CDS | 20.0% |
| !!! | ATAAACGATTATGGATATTT+TGG | + | chr4.1:37701019-37701038 | MS.gene67389:CDS | 20.0% |
| !!! | ATGTGTTTTAGTTAATTTTG+GGG | + | chr4.1:37702598-37702617 | MS.gene67389:intron | 20.0% |
| !!! | GATGTGTTTTAGTTAATTTT+GGG | + | chr4.1:37702597-37702616 | MS.gene67389:intron | 20.0% |
| !!! | GCAAATAACAAATATCTTTT+GGG | + | chr4.1:37700982-37701001 | MS.gene67389:CDS | 20.0% |
| !!! | TCTTTCTTTTTTATTGCTTT+TGG | - | chr4.1:37702339-37702358 | None:intergenic | 20.0% |
| !!! | TGAATTACCAAATTTTCTTT+AGG | - | chr4.1:37702453-37702472 | None:intergenic | 20.0% |
| !!! | TGATGTGTTTTAGTTAATTT+TGG | + | chr4.1:37702596-37702615 | MS.gene67389:intron | 20.0% |
| !!! | TTTCTTTTATGACTTTCAAA+TGG | + | chr4.1:37700949-37700968 | MS.gene67389:CDS | 20.0% |
| !!! | TTTGAAGTCAGATATAAATT+TGG | + | chr4.1:37701600-37701619 | MS.gene67389:CDS | 20.0% |
| ! | AGTTTCAAATAACCATTGAA+AGG | - | chr4.1:37701179-37701198 | None:intergenic | 25.0% |
| ! | ATGGTCAAATTAACAAATAG+AGG | + | chr4.1:37702132-37702151 | MS.gene67389:CDS | 25.0% |
| ! | ATTTCACTTGATCGAAAAAT+TGG | + | chr4.1:37700614-37700633 | MS.gene67389:CDS | 25.0% |
| ! | GAAATTCTTCATATTCTTCT+TGG | - | chr4.1:37701789-37701808 | None:intergenic | 25.0% |
| ! | GAAATTGGATAGAAAGAAAA+AGG | + | chr4.1:37702401-37702420 | MS.gene67389:CDS | 25.0% |
| ! | GAAGAATATGAAGAATTTCT+AGG | + | chr4.1:37701790-37701809 | MS.gene67389:CDS | 25.0% |
| ! | GCATAAAGAATTTGAATGAT+GGG | + | chr4.1:37701818-37701837 | MS.gene67389:CDS | 25.0% |
| ! | GCATTATTGATGTATTTCAA+AGG | + | chr4.1:37700908-37700927 | MS.gene67389:CDS | 25.0% |
| ! | GTTTCCATATCAATTACAAA+TGG | + | chr4.1:37702273-37702292 | MS.gene67389:CDS | 25.0% |
| ! | TACAACATACAAGACAAATA+AGG | + | chr4.1:37701060-37701079 | MS.gene67389:CDS | 25.0% |
| ! | TACTTATACTTCAATTATGC+AGG | + | chr4.1:37702727-37702746 | MS.gene67389:intron | 25.0% |
| ! | TCGAAAAATTGGAAAATACA+AGG | + | chr4.1:37700625-37700644 | MS.gene67389:CDS | 25.0% |
| ! | TGAAAGTCATAAAAGAAAGA+AGG | - | chr4.1:37700947-37700966 | None:intergenic | 25.0% |
| ! | TGCATAAAGAATTTGAATGA+TGG | + | chr4.1:37701817-37701836 | MS.gene67389:CDS | 25.0% |
| ! | TGGAAAACCTAAAGAAAATT+TGG | + | chr4.1:37702443-37702462 | MS.gene67389:CDS | 25.0% |
| ! | TTACACTCCAAAAATATTTG+AGG | + | chr4.1:37701759-37701778 | MS.gene67389:CDS | 25.0% |
| ! | TTTATGTCTTGACTCATAAT+CGG | - | chr4.1:37701686-37701705 | None:intergenic | 25.0% |
| !! | AATAACAAATATCTTTTGGG+CGG | + | chr4.1:37700985-37701004 | MS.gene67389:CDS | 25.0% |
| !! | TATACATGATGATGACAATA+AGG | + | chr4.1:37701852-37701871 | MS.gene67389:CDS | 25.0% |
| !! | TCCTAAGTTGAAAATTAAGA+AGG | + | chr4.1:37701708-37701727 | MS.gene67389:CDS | 25.0% |
| AAACAATTCCTTCCTTTCAA+TGG | + | chr4.1:37701164-37701183 | MS.gene67389:CDS | 30.0% | |
| AAATAAGGATTATCGACCAT+TGG | + | chr4.1:37701075-37701094 | MS.gene67389:CDS | 30.0% | |
| AATAAGGAGAGGAAAGTAAT+AGG | + | chr4.1:37701868-37701887 | MS.gene67389:CDS | 30.0% | |
| AATAAGGATTATCGACCATT+GGG | + | chr4.1:37701076-37701095 | MS.gene67389:CDS | 30.0% | |
| AATTTCTCCTTCCATGATTT+AGG | - | chr4.1:37702387-37702406 | None:intergenic | 30.0% | |
| ACAAAAGTTTCTTGGCTATT+TGG | - | chr4.1:37700344-37700363 | None:intergenic | 30.0% | |
| ACATACTCATGAAAATCCTT+TGG | - | chr4.1:37700782-37700801 | None:intergenic | 30.0% | |
| ACTCAACAATTGAGTAAAAG+TGG | - | chr4.1:37702801-37702820 | None:intergenic | 30.0% | |
| AGAATTTCCTTCGAACTAAA+AGG | + | chr4.1:37700855-37700874 | MS.gene67389:CDS | 30.0% | |
| ATAAGGAGAGGAAAGTAATA+GGG | + | chr4.1:37701869-37701888 | MS.gene67389:CDS | 30.0% | |
| ATATAAGAGAAAATGCCCTA+AGG | + | chr4.1:37701317-37701336 | MS.gene67389:CDS | 30.0% | |
| CACAGTAACAAGAAGTAAAT+AGG | - | chr4.1:37702663-37702682 | None:intergenic | 30.0% | |
| CACTCATTATTATTGAAACC+TGG | + | chr4.1:37700105-37700124 | MS.gene67389:intron | 30.0% | |
| CCATCAATTTCAATTGTTGA+AGG | + | chr4.1:37700278-37700297 | MS.gene67389:CDS | 30.0% | |
| CCTTCAACAATTGAAATTGA+TGG | - | chr4.1:37700281-37700300 | None:intergenic | 30.0% | |
| CTAAAACACATCAAACTAGT+AGG | - | chr4.1:37702589-37702608 | None:intergenic | 30.0% | |
| CTCAACAATTGAGTAAAAGT+GGG | - | chr4.1:37702800-37702819 | None:intergenic | 30.0% | |
| CTCACCATTTGTAATTGATA+TGG | - | chr4.1:37702280-37702299 | None:intergenic | 30.0% | |
| GATACAATGATTTATGTCCT+CGG | + | chr4.1:37702109-37702128 | MS.gene67389:CDS | 30.0% | |
| GGCAATAAAAGCAAAAAAGA+CGG | + | chr4.1:37700470-37700489 | MS.gene67389:CDS | 30.0% | |
| GTAATAAACGTCCTAAATCA+TGG | + | chr4.1:37702373-37702392 | MS.gene67389:CDS | 30.0% | |
| GTAGTATTAACTAAAAGAGG+AGG | - | chr4.1:37700181-37700200 | None:intergenic | 30.0% | |
| TAAATCATGGAAGGAGAAAT+TGG | + | chr4.1:37702386-37702405 | MS.gene67389:CDS | 30.0% | |
| TAGACATAGTTGGTTATACA+AGG | + | chr4.1:37700822-37700841 | MS.gene67389:CDS | 30.0% | |
| TAGTTCGAAGGAAATTCTTA+TGG | - | chr4.1:37700853-37700872 | None:intergenic | 30.0% | |
| TCAAATAACCATTGAAAGGA+AGG | - | chr4.1:37701175-37701194 | None:intergenic | 30.0% | |
| TGGCAAAATACTTTCATGAA+TGG | - | chr4.1:37700324-37700343 | None:intergenic | 30.0% | |
| TGGGAAAAATATAGAGTCAA+TGG | - | chr4.1:37700243-37700262 | None:intergenic | 30.0% | |
| TTTCGAAGTGTGTGAAAAAT+TGG | - | chr4.1:37701627-37701646 | None:intergenic | 30.0% | |
| ! | ATAATGTTTCTGATGATTCG+TGG | + | chr4.1:37701458-37701477 | MS.gene67389:CDS | 30.0% |
| ! | GAAACTTTTCTCAAAGCAAT+GGG | + | chr4.1:37701193-37701212 | MS.gene67389:CDS | 30.0% |
| ! | GAAAGGACATCATATTGATT+TGG | + | chr4.1:37702062-37702081 | MS.gene67389:CDS | 30.0% |
| ! | GCCTTCTTAATTTTCAACTT+AGG | - | chr4.1:37701712-37701731 | None:intergenic | 30.0% |
| ! | TGAAACTTTTCTCAAAGCAA+TGG | + | chr4.1:37701192-37701211 | MS.gene67389:CDS | 30.0% |
| ! | TGATCTGTTAAGATGGTTTT+TGG | - | chr4.1:37701229-37701248 | None:intergenic | 30.0% |
| ! | TGGAACTCCTCAAATATTTT+TGG | - | chr4.1:37701769-37701788 | None:intergenic | 30.0% |
| ! | TTGAAATTGATGGCTCATTA+AGG | - | chr4.1:37700271-37700290 | None:intergenic | 30.0% |
| !! | AAAATCCTTTGGCTTTAATC+CGG | - | chr4.1:37700771-37700790 | None:intergenic | 30.0% |
| !! | ATTGACTCTATATTTTTCCC+AGG | + | chr4.1:37700242-37700261 | MS.gene67389:intron | 30.0% |
| !! | TATATAATTTGTTGTGCTGC+TGG | + | chr4.1:37702489-37702508 | MS.gene67389:intron | 30.0% |
| !! | TGCATTTTGATCTGTTAAGA+TGG | - | chr4.1:37701236-37701255 | None:intergenic | 30.0% |
| !!! | AATGATTCCTTTTAGTTCGA+AGG | - | chr4.1:37700865-37700884 | None:intergenic | 30.0% |
| !!! | TTCAGACAAACTGTTGTTTT+TGG | + | chr4.1:37701121-37701140 | MS.gene67389:CDS | 30.0% |
| !!! | TTTTCGAGTGAAGGAAAAAT+GGG | + | chr4.1:37701492-37701511 | MS.gene67389:CDS | 30.0% |
| !!! | TTTTGGAGTGTAAATGTTTC+CGG | - | chr4.1:37701752-37701771 | None:intergenic | 30.0% |
| !!! | TTTTTCGAGTGAAGGAAAAA+TGG | + | chr4.1:37701491-37701510 | MS.gene67389:CDS | 30.0% |
| AAAAGTGGGACTTGTATGAA+GGG | - | chr4.1:37702786-37702805 | None:intergenic | 35.0% | |
| AAAGCTTCAGTAACAGATGA+TGG | + | chr4.1:37702752-37702771 | MS.gene67389:CDS | 35.0% | |
| AACAGATCAAAATGCAGCAA+TGG | + | chr4.1:37701240-37701259 | MS.gene67389:CDS | 35.0% | |
| AAGATGAATTTCTGAACGCA+TGG | + | chr4.1:37701416-37701435 | MS.gene67389:CDS | 35.0% | |
| AATGAGTATAGCAGGAGAAT+TGG | + | chr4.1:37700425-37700444 | MS.gene67389:CDS | 35.0% | |
| ACAAGCATCACAAATTGTGT+TGG | + | chr4.1:37700736-37700755 | MS.gene67389:CDS | 35.0% | |
| AGAGTCTAACAAGATAGTTG+AGG | + | chr4.1:37702200-37702219 | MS.gene67389:CDS | 35.0% | |
| CAAGATAGTTGAGGATATGT+TGG | + | chr4.1:37702209-37702228 | MS.gene67389:CDS | 35.0% | |
| CATAACTAGAGAAATAGCCT+TGG | - | chr4.1:37701266-37701285 | None:intergenic | 35.0% | |
| CATAGTCCATGAAATGTTTG+AGG | - | chr4.1:37701289-37701308 | None:intergenic | 35.0% | |
| CTAAAAGGAATCATTCACTG+AGG | + | chr4.1:37700870-37700889 | MS.gene67389:CDS | 35.0% | |
| GCACAGATGATAAACGATTA+TGG | + | chr4.1:37701010-37701029 | MS.gene67389:CDS | 35.0% | |
| GTTAGACTCTTCATAGACTT+TGG | - | chr4.1:37702190-37702209 | None:intergenic | 35.0% | |
| GTTATGCCTCAAACATTTCA+TGG | + | chr4.1:37701280-37701299 | MS.gene67389:CDS | 35.0% | |
| TAAAAGTGGGACTTGTATGA+AGG | - | chr4.1:37702787-37702806 | None:intergenic | 35.0% | |
| TAAACGTCCTAAATCATGGA+AGG | + | chr4.1:37702377-37702396 | MS.gene67389:CDS | 35.0% | |
| TATAGCAGGAGAATTGGATT+TGG | + | chr4.1:37700431-37700450 | MS.gene67389:CDS | 35.0% | |
| TGTAGATTATACACCACACT+TGG | + | chr4.1:37700361-37700380 | MS.gene67389:CDS | 35.0% | |
| TGTTCGAAAAACTTTCACTG+CGG | + | chr4.1:37701525-37701544 | MS.gene67389:CDS | 35.0% | |
| TTATACACCACACTTGGAAA+TGG | + | chr4.1:37700367-37700386 | MS.gene67389:CDS | 35.0% | |
| TTCAAAATCCGAGCAGAAAT+GGG | - | chr4.1:37701371-37701390 | None:intergenic | 35.0% | |
| TTTGGTATTCGTCGAGAATA+TGG | + | chr4.1:37700449-37700468 | MS.gene67389:CDS | 35.0% | |
| ! | ATGATGATGACAATAAGGAG+AGG | + | chr4.1:37701857-37701876 | MS.gene67389:CDS | 35.0% |
| ! | ATTTTTAATCCTGATGCCTG+CGG | + | chr4.1:37702561-37702580 | MS.gene67389:intron | 35.0% |
| ! | TGTCGTAAATTTGAGACACA+TGG | + | chr4.1:37701922-37701941 | MS.gene67389:CDS | 35.0% |
| ! | TGTTGAAGGTGTAGAGAAAT+GGG | + | chr4.1:37700292-37700311 | MS.gene67389:CDS | 35.0% |
| ! | TTGTTGAAGGTGTAGAGAAA+TGG | + | chr4.1:37700291-37700310 | MS.gene67389:CDS | 35.0% |
| ! | TTTGTTAATTTGACCATCCG+AGG | - | chr4.1:37702129-37702148 | None:intergenic | 35.0% |
| !! | AAGATTCTCGTGCTTTAAAG+AGG | + | chr4.1:37700508-37700527 | MS.gene67389:CDS | 35.0% |
| !! | AGATTCTCGTGCTTTAAAGA+GGG | + | chr4.1:37700509-37700528 | MS.gene67389:CDS | 35.0% |
| !! | GATGTGTTTTTGTATGACAG+TGG | + | chr4.1:37702516-37702535 | MS.gene67389:intron | 35.0% |
| !! | TAGTCATGCTTTGAAAGTGT+TGG | + | chr4.1:37701954-37701973 | MS.gene67389:CDS | 35.0% |
| !!! | GCATTCAATTTTTCGAGTGA+AGG | + | chr4.1:37701483-37701502 | MS.gene67389:CDS | 35.0% |
| !!! | GTTAATTTTGGGGTCTAGTT+TGG | + | chr4.1:37702608-37702627 | MS.gene67389:intron | 35.0% |
| AAAGTGGGACTTGTATGAAG+GGG | - | chr4.1:37702785-37702804 | None:intergenic | 40.0% | |
| AGGAATCATTCACTGAGGTA+TGG | + | chr4.1:37700875-37700894 | MS.gene67389:CDS | 40.0% | |
| AGTCCAACAAATACTCCCAA+TGG | - | chr4.1:37701094-37701113 | None:intergenic | 40.0% | |
| AGTGAAGGAAAAATGGGCAT+GGG | + | chr4.1:37701498-37701517 | MS.gene67389:CDS | 40.0% | |
| ATGAGTGAATTTCTTACCCG+TGG | - | chr4.1:37700092-37700111 | None:intergenic | 40.0% | |
| ATGGCTCATTAAGGTTTCCT+GGG | - | chr4.1:37700262-37700281 | None:intergenic | 40.0% | |
| CAATGATTTATGTCCTCGGA+TGG | + | chr4.1:37702113-37702132 | MS.gene67389:CDS | 40.0% | |
| CACTTCGAAAGAGTTGTGAA+TGG | + | chr4.1:37701637-37701656 | MS.gene67389:CDS | 40.0% | |
| CTTCAAAATCCGAGCAGAAA+TGG | - | chr4.1:37701372-37701391 | None:intergenic | 40.0% | |
| GCAAATACAAGCACTAAAGG+AGG | - | chr4.1:37702634-37702653 | None:intergenic | 40.0% | |
| GCGTGCATATCAAGGAAAAA+TGG | + | chr4.1:37702423-37702442 | MS.gene67389:CDS | 40.0% | |
| GCTGCAAATACAAGCACTAA+AGG | - | chr4.1:37702637-37702656 | None:intergenic | 40.0% | |
| GGAAATGGAGTTTGAATCTG+AGG | + | chr4.1:37700382-37700401 | MS.gene67389:CDS | 40.0% | |
| GGAAGTAATCGAGATAGGAA+AGG | + | chr4.1:37702045-37702064 | MS.gene67389:CDS | 40.0% | |
| GTTCGAAAAACTTTCACTGC+GGG | + | chr4.1:37701526-37701545 | MS.gene67389:CDS | 40.0% | |
| TCAAACTCCATTTCCAAGTG+TGG | - | chr4.1:37700377-37700396 | None:intergenic | 40.0% | |
| TGAATCCGGATTAAAGCCAA+AGG | + | chr4.1:37700763-37700782 | MS.gene67389:CDS | 40.0% | |
| TTGGCTAATAAGCGTACTGA+TGG | + | chr4.1:37702228-37702247 | MS.gene67389:CDS | 40.0% | |
| ! | AATGGGAGCTCTTTTGGTAT+AGG | - | chr4.1:37701354-37701373 | None:intergenic | 40.0% |
| ! | ACTTTTCTCAAAGCAATGGG+TGG | + | chr4.1:37701196-37701215 | MS.gene67389:CDS | 40.0% |
| ! | AGAAAAAGGCGTGCATATCA+AGG | + | chr4.1:37702415-37702434 | MS.gene67389:CDS | 40.0% |
| ! | CATTTCATGGACTATGCACT+TGG | + | chr4.1:37701293-37701312 | MS.gene67389:CDS | 40.0% |
| ! | CGTACTGATGGAGAATCAAT+TGG | + | chr4.1:37702240-37702259 | MS.gene67389:CDS | 40.0% |
| ! | CTCTAGACTCTTTTGTCAAG+TGG | - | chr4.1:37700559-37700578 | None:intergenic | 40.0% |
| ! | GTTGGTGGAATAGACATAGT+TGG | + | chr4.1:37700812-37700831 | MS.gene67389:CDS | 40.0% |
| !! | ATTGTGTTGGCTGATGAATC+CGG | + | chr4.1:37700749-37700768 | MS.gene67389:CDS | 40.0% |
| AAAGAGCTCCCATTTCTGCT+CGG | + | chr4.1:37701360-37701379 | MS.gene67389:CDS | 45.0% | |
| AACTGGGTGTAAAGCACGTA+TGG | + | chr4.1:37700589-37700608 | MS.gene67389:CDS | 45.0% | |
| AATCACCTTCTTCAACCACC+AGG | + | chr4.1:37700671-37700690 | MS.gene67389:CDS | 45.0% | |
| ACCACCTCTTTGTCATTCCA+CGG | + | chr4.1:37700072-37700091 | MS.gene67389:CDS | 45.0% | |
| ATAGGTGGTTCACATGCCTT+AGG | - | chr4.1:37701336-37701355 | None:intergenic | 45.0% | |
| ATCAAACTAGTAGGAACCGC+AGG | - | chr4.1:37702580-37702599 | None:intergenic | 45.0% | |
| ATCACCTTCTTCAACCACCA+GGG | + | chr4.1:37700672-37700691 | MS.gene67389:CDS | 45.0% | |
| ATCATATGAACGTACCCTGG+TGG | - | chr4.1:37700689-37700708 | None:intergenic | 45.0% | |
| CGAATCATATGAACGTACCC+TGG | - | chr4.1:37700692-37700711 | None:intergenic | 45.0% | |
| CGCACTATATACTCAAGCGA+TGG | + | chr4.1:37702004-37702023 | MS.gene67389:CDS | 45.0% | |
| CGCTTGAGTATATAGTGCGA+AGG | - | chr4.1:37702003-37702022 | None:intergenic | 45.0% | |
| CTAGAGCAGAAACCAGAACT+GGG | + | chr4.1:37700573-37700592 | MS.gene67389:CDS | 45.0% | |
| GAAAGTAATAGGGAGCTTCG+AGG | + | chr4.1:37701879-37701898 | MS.gene67389:CDS | 45.0% | |
| GAGTATGTGTCCAAGCAAGT+TGG | + | chr4.1:37700794-37700813 | MS.gene67389:CDS | 45.0% | |
| GAGTGAAGGAAAAATGGGCA+TGG | + | chr4.1:37701497-37701516 | MS.gene67389:CDS | 45.0% | |
| GATGGCTCATTAAGGTTTCC+TGG | - | chr4.1:37700263-37700282 | None:intergenic | 45.0% | |
| GGTCAGGAAGTAATCGAGAT+AGG | + | chr4.1:37702040-37702059 | MS.gene67389:CDS | 45.0% | |
| TAGGTGGTTCACATGCCTTA+GGG | - | chr4.1:37701335-37701354 | None:intergenic | 45.0% | |
| TCAAAATGCAGCAATGGCCA+AGG | + | chr4.1:37701246-37701265 | MS.gene67389:CDS | 45.0% | |
| TCACTGAGGTATGGTGAAGT+AGG | + | chr4.1:37700884-37700903 | MS.gene67389:CDS | 45.0% | |
| TTACCCGTGGAATGACAAAG+AGG | - | chr4.1:37700079-37700098 | None:intergenic | 45.0% | |
| ! | AGCAGAAATGGGAGCTCTTT+TGG | - | chr4.1:37701360-37701379 | None:intergenic | 45.0% |
| ! | GTCTATTCCACCAACTTGCT+TGG | - | chr4.1:37700807-37700826 | None:intergenic | 45.0% |
| ! | TATGTGTCCAAGCAAGTTGG+TGG | + | chr4.1:37700797-37700816 | MS.gene67389:CDS | 45.0% |
| ! | TCTAGAGCAGAAACCAGAAC+TGG | + | chr4.1:37700572-37700591 | MS.gene67389:CDS | 45.0% |
| !! | AATGACAAAGAGGTGGTGGA+CGG | - | chr4.1:37700069-37700088 | None:intergenic | 45.0% |
| !! | CGACCATTGGGAGTATTTGT+TGG | + | chr4.1:37701088-37701107 | MS.gene67389:CDS | 45.0% |
| !! | TGCTTTAAAGAGGGAAAGCG+AGG | + | chr4.1:37700518-37700537 | MS.gene67389:CDS | 45.0% |
| !! | AATTATATAATAATAAAGTT+AGG | - | chr4.1:37702478-37702497 | None:intergenic | 5.0% |
| ACGTGCTTTACACCCAGTTC+TGG | - | chr4.1:37700588-37700607 | None:intergenic | 50.0% | |
| AGCGATGGACAAGAGAAGCA+AGG | + | chr4.1:37702019-37702038 | MS.gene67389:CDS | 50.0% | |
| AGGGAGCTTCGAGGATCAAA+AGG | + | chr4.1:37701888-37701907 | MS.gene67389:CDS | 50.0% | |
| CCACCTCTTTGTCATTCCAC+GGG | + | chr4.1:37700073-37700092 | MS.gene67389:CDS | 50.0% | |
| GCACGTATGCTTGTTCAAGC+CGG | + | chr4.1:37701730-37701749 | MS.gene67389:CDS | 50.0% | |
| GTGGAATGACAAAGAGGTGG+TGG | - | chr4.1:37700073-37700092 | None:intergenic | 50.0% | |
| TGGACAAGAGAAGCAAGGTC+AGG | + | chr4.1:37702024-37702043 | MS.gene67389:CDS | 50.0% | |
| ! | GGGAGCTCTTTTGGTATAGG+TGG | - | chr4.1:37701351-37701370 | None:intergenic | 50.0% |
| CCCGTGGAATGACAAAGAGG+TGG | - | chr4.1:37700076-37700095 | None:intergenic | 55.0% | |
| CGTACCCTGGTGGTTGAAGA+AGG | - | chr4.1:37700679-37700698 | None:intergenic | 55.0% | |
| TAGTAGGAACCGCAGGCATC+AGG | - | chr4.1:37702573-37702592 | None:intergenic | 55.0% | |
| !! | AGGTGGTGGACGGCCAGAAT+TGG | - | chr4.1:37700059-37700078 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 37700046 | 37702832 | 37700046 | ID=MS.gene67389 |
| chr4.1 | mRNA | 37700046 | 37702832 | 37700046 | ID=MS.gene67389.t1;Parent=MS.gene67389 |
| chr4.1 | exon | 37700046 | 37700094 | 37700046 | ID=MS.gene67389.t1.exon1;Parent=MS.gene67389.t1 |
| chr4.1 | CDS | 37700046 | 37700094 | 37700046 | ID=cds.MS.gene67389.t1;Parent=MS.gene67389.t1 |
| chr4.1 | exon | 37700264 | 37702464 | 37700264 | ID=MS.gene67389.t1.exon2;Parent=MS.gene67389.t1 |
| chr4.1 | CDS | 37700264 | 37702464 | 37700264 | ID=cds.MS.gene67389.t1;Parent=MS.gene67389.t1 |
| chr4.1 | exon | 37702749 | 37702832 | 37702749 | ID=MS.gene67389.t1.exon3;Parent=MS.gene67389.t1 |
| chr4.1 | CDS | 37702749 | 37702832 | 37702749 | ID=cds.MS.gene67389.t1;Parent=MS.gene67389.t1 |
| Gene Sequence |
| Protein sequence |