AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68386

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68386.t1 MTR_1g045610 98.450 258 4 0 1 258 1 258 0.0 536
MS.gene68386.t1 MTR_1g073170 65.975 241 74 4 5 238 4 243 7.41e-102 297
MS.gene68386.t1 MTR_1g110460 69.091 110 34 0 17 126 22 131 2.20e-53 175
MS.gene68386.t1 MTR_7g035075 70.476 105 31 0 22 126 15 119 1.94e-52 169
MS.gene68386.t1 MTR_1g086530 69.159 107 33 0 20 126 32 138 4.61e-52 171
MS.gene68386.t1 MTR_1g086510 70.476 105 31 0 22 126 22 126 7.28e-52 170
MS.gene68386.t1 MTR_6g006030 69.524 105 32 0 22 126 15 119 9.21e-52 168
MS.gene68386.t1 MTR_4g063100 65.455 110 38 0 15 124 1 110 5.87e-51 167
MS.gene68386.t1 MTR_2g096380 64.602 113 39 1 15 127 1 112 6.09e-50 164
MS.gene68386.t1 MTR_5g078140 51.515 165 73 4 22 180 13 176 9.10e-47 158
MS.gene68386.t1 MTR_4g478180 60.909 110 43 0 15 124 7 116 1.27e-46 159
MS.gene68386.t1 MTR_7g117730 63.810 105 38 0 23 127 14 118 9.01e-46 154
MS.gene68386.t1 MTR_4g073420 55.072 138 59 2 23 160 14 148 9.40e-46 155
MS.gene68386.t1 MTR_4g121460 66.990 103 34 0 22 124 13 115 1.19e-45 156
MS.gene68386.t1 MTR_2g033170 70.476 105 31 0 22 126 25 129 1.92e-45 155
MS.gene68386.t1 MTR_3g097450 62.727 110 41 0 15 124 6 115 2.85e-45 154
MS.gene68386.t1 MTR_7g076740 61.682 107 40 1 22 127 13 119 5.45e-45 153
MS.gene68386.t1 MTR_4g102380 65.049 103 36 0 22 124 13 115 1.53e-44 151
MS.gene68386.t1 MTR_4g125520 60.000 110 44 0 18 127 9 118 1.94e-44 152
MS.gene68386.t1 MTR_5g007370 56.481 108 47 0 17 124 8 115 6.12e-44 150
MS.gene68386.t1 MTR_3g074520 58.182 110 46 0 15 124 6 115 6.79e-44 152
MS.gene68386.t1 MTR_8g027345 65.686 102 35 0 23 124 14 115 8.83e-44 150
MS.gene68386.t1 MTR_7g115650 59.048 105 43 0 22 126 13 117 2.08e-43 146
MS.gene68386.t1 MTR_3g065440 53.906 128 57 1 22 149 13 138 2.12e-43 149
MS.gene68386.t1 MTR_2g034790 63.107 103 38 0 22 124 13 115 2.21e-43 150
MS.gene68386.t1 MTR_4g123040 67.619 105 34 0 22 126 25 129 2.29e-43 149
MS.gene68386.t1 MTR_3g083540 62.264 106 40 0 22 127 42 147 2.31e-43 149
MS.gene68386.t1 MTR_8g031360 60.577 104 40 1 22 124 14 117 4.03e-43 148
MS.gene68386.t1 MTR_7g011170 63.107 103 38 0 22 124 13 115 4.90e-43 148
MS.gene68386.t1 MTR_2g011660 61.165 103 40 0 22 124 14 116 5.44e-43 149
MS.gene68386.t1 MTR_5g029840 62.136 103 39 0 22 124 13 115 5.71e-43 149
MS.gene68386.t1 MTR_1g085040 58.772 114 47 0 13 126 4 117 6.60e-43 149
MS.gene68386.t1 MTR_2g099740 56.250 112 49 0 13 124 4 115 1.14e-42 150
MS.gene68386.t1 MTR_3g011610 55.372 121 50 1 6 126 26 142 1.14e-42 152
MS.gene68386.t1 MTR_1g076150 61.165 103 40 0 22 124 13 115 1.18e-42 146
MS.gene68386.t1 MTR_7g096930 46.795 156 77 3 22 171 13 168 2.19e-42 146
MS.gene68386.t1 MTR_1g100653 56.250 112 49 0 15 126 6 117 2.30e-42 146
MS.gene68386.t1 MTR_5g079670 56.364 110 48 0 15 124 5 114 3.52e-42 143
MS.gene68386.t1 MTR_1g062940 60.952 105 41 0 22 126 7 111 5.19e-42 143
MS.gene68386.t1 MTR_8g095390 59.091 110 45 0 15 124 6 115 5.77e-42 145
MS.gene68386.t1 MTR_2g089620 60.194 103 41 0 22 124 13 115 6.02e-42 146
MS.gene68386.t1 MTR_4g091490 60.194 103 41 0 22 124 14 116 6.27e-42 147
MS.gene68386.t1 MTR_1g112760 57.143 112 48 0 13 124 5 116 6.93e-42 143
MS.gene68386.t1 MTR_3g052450 59.091 110 45 0 17 126 36 145 9.22e-42 150
MS.gene68386.t1 MTR_8g017440 56.250 112 49 0 13 124 4 115 9.29e-42 146
MS.gene68386.t1 MTR_3g052430 60.952 105 41 0 22 126 42 146 9.89e-42 150
MS.gene68386.t1 MTR_4g065017 42.714 199 91 4 22 198 18 215 1.42e-41 145
MS.gene68386.t1 MTR_2g064160 54.386 114 52 0 11 124 1 114 2.77e-41 144
MS.gene68386.t1 MTR_1g043080 55.455 110 49 0 15 124 6 115 3.71e-41 142
MS.gene68386.t1 MTR_0140s0030 50.746 134 66 0 22 155 14 147 3.86e-41 144
MS.gene68386.t1 MTR_0489s0020 50.746 134 66 0 22 155 14 147 3.86e-41 144
MS.gene68386.t1 MTR_3g077110 61.165 103 40 0 22 124 13 115 4.98e-41 144
MS.gene68386.t1 MTR_0008s0390 56.034 116 51 0 22 137 14 129 6.47e-41 142
MS.gene68386.t1 MTR_4g485530 60.784 102 40 0 23 124 14 115 7.32e-41 139
MS.gene68386.t1 MTR_7g111290 61.905 105 40 0 13 117 4 108 7.64e-41 144
MS.gene68386.t1 MTR_2g097910 54.400 125 49 1 22 138 21 145 8.20e-41 143
MS.gene68386.t1 MTR_1g100667 61.538 104 40 0 22 125 14 117 9.81e-41 141
MS.gene68386.t1 MTR_4g082290 63.107 103 38 0 22 124 13 115 1.05e-40 145
MS.gene68386.t1 MTR_1g021230 60.000 105 42 0 22 126 58 162 1.32e-40 145
MS.gene68386.t1 MTR_7g087130 56.897 116 49 1 22 137 13 127 1.32e-40 143
MS.gene68386.t1 MTR_8g042410 59.048 105 43 0 20 124 36 140 1.51e-40 147
MS.gene68386.t1 MTR_4g082230 62.136 103 39 0 22 124 13 115 1.99e-40 144
MS.gene68386.t1 MTR_8g017540 55.357 112 50 0 13 124 50 161 2.58e-40 143
MS.gene68386.t1 MTR_3g028740 60.000 105 42 0 22 126 23 127 2.70e-40 142
MS.gene68386.t1 MTR_7g010210 57.143 112 48 0 15 126 6 117 2.72e-40 142
MS.gene68386.t1 MTR_1g043050 54.867 113 51 0 15 127 6 118 2.98e-40 139
MS.gene68386.t1 MTR_7g010210 57.143 112 48 0 15 126 6 117 3.23e-40 140
MS.gene68386.t1 MTR_6g012690 61.165 103 40 0 22 124 13 115 3.37e-40 142
MS.gene68386.t1 MTR_0251s0050 59.434 106 43 0 22 127 14 119 4.15e-40 140
MS.gene68386.t1 MTR_6g055910 56.881 109 47 0 16 124 9 117 4.59e-40 140
MS.gene68386.t1 MTR_8g098860 54.386 114 52 0 13 126 4 117 4.84e-40 141
MS.gene68386.t1 MTR_8g020490 61.765 102 39 0 23 124 10 111 5.08e-40 139
MS.gene68386.t1 MTR_3g039990 44.706 170 87 3 22 188 14 179 6.15e-40 140
MS.gene68386.t1 MTR_4g100720 57.407 108 46 0 18 125 10 117 8.77e-40 136
MS.gene68386.t1 MTR_7g110830 55.263 114 51 0 13 126 4 117 1.01e-39 141
MS.gene68386.t1 MTR_8g017500 54.464 112 51 0 13 124 4 115 1.39e-39 140
MS.gene68386.t1 MTR_0008s0470 54.310 116 53 0 22 137 14 129 1.63e-39 139
MS.gene68386.t1 MTR_1g085640 55.263 114 51 0 13 126 4 117 2.86e-39 140
MS.gene68386.t1 MTR_0008s0280 57.143 105 45 0 22 126 13 117 5.74e-39 135
MS.gene68386.t1 MTR_4g105130 55.357 112 50 0 13 124 4 115 1.46e-38 138
MS.gene68386.t1 MTR_8g017340 54.867 113 50 1 13 124 4 116 1.90e-38 140
MS.gene68386.t1 MTR_5g010020 55.140 107 48 0 13 119 4 110 3.10e-38 137
MS.gene68386.t1 MTR_8g017390 54.867 113 50 1 13 124 4 116 3.73e-38 139
MS.gene68386.t1 MTR_2g089450 58.824 102 42 0 22 123 13 114 5.45e-38 134
MS.gene68386.t1 MTR_4g063100 76.712 73 17 0 52 124 9 81 5.90e-38 133
MS.gene68386.t1 MTR_8g017350 53.982 113 51 1 13 124 4 116 1.57e-37 139
MS.gene68386.t1 MTR_2g089420 59.223 103 42 0 22 124 12 114 1.59e-37 137
MS.gene68386.t1 MTR_1g017000 52.252 111 52 1 15 124 6 116 2.32e-37 132
MS.gene68386.t1 MTR_6g009430 56.311 103 45 0 22 124 13 115 2.32e-37 134
MS.gene68386.t1 MTR_6g012180 56.604 106 46 0 15 120 6 111 3.85e-37 133
MS.gene68386.t1 MTR_0063s0090 53.774 106 49 0 22 127 13 118 6.62e-37 130
MS.gene68386.t1 MTR_2g096380 72.368 76 21 0 52 127 18 93 2.31e-36 128
MS.gene68386.t1 MTR_7g109320 63.462 104 38 0 22 125 13 116 3.93e-36 131
MS.gene68386.t1 MTR_1g017140 53.333 120 53 2 22 138 13 132 4.50e-36 131
MS.gene68386.t1 MTR_4g057635 56.731 104 44 1 22 124 13 116 9.51e-36 130
MS.gene68386.t1 MTR_3g103570 51.639 122 56 2 22 140 13 134 1.86e-35 129
MS.gene68386.t1 MTR_3g461490 52.727 110 52 0 15 124 6 115 2.69e-35 129
MS.gene68386.t1 MTR_5g042030 55.340 103 46 0 22 124 8 110 2.92e-35 127
MS.gene68386.t1 MTR_5g079120 55.769 104 46 0 22 125 62 165 5.30e-35 127
MS.gene68386.t1 MTR_2g067420 56.566 99 43 0 22 120 15 113 6.10e-35 128
MS.gene68386.t1 MTR_2g088170 58.095 105 44 0 22 126 30 134 8.95e-35 130
MS.gene68386.t1 MTR_5g014990 44.586 157 70 3 22 175 13 155 1.35e-34 126
MS.gene68386.t1 MTR_2g095520 56.566 99 42 1 22 119 13 111 2.59e-34 126
MS.gene68386.t1 MTR_7g102110 53.846 104 47 1 22 124 13 116 3.04e-34 124
MS.gene68386.t1 MTR_1g083630 55.238 105 47 0 22 126 13 117 5.06e-34 129
MS.gene68386.t1 MTR_5g078910 54.808 104 47 0 22 125 8 111 7.54e-34 124
MS.gene68386.t1 MTR_0197s0010 55.556 99 44 0 26 124 6 104 9.49e-34 122
MS.gene68386.t1 MTR_8g006470 49.565 115 57 1 13 126 2 116 2.65e-33 122
MS.gene68386.t1 MTR_5g079290 54.369 103 47 0 22 124 18 120 6.66e-33 120
MS.gene68386.t1 MTR_4g097570 55.670 97 42 1 22 117 13 109 1.01e-32 121
MS.gene68386.t1 MTR_5g078800 54.808 104 47 0 22 125 8 111 2.11e-32 119
MS.gene68386.t1 MTR_6g090405 52.885 104 48 1 22 124 13 116 2.38e-32 119
MS.gene68386.t1 MTR_4g128670 55.556 99 43 1 22 119 13 111 2.92e-32 121
MS.gene68386.t1 MTR_5g079220 54.369 103 47 0 22 124 22 124 3.24e-32 119
MS.gene68386.t1 MTR_8g060940 55.000 100 45 0 22 121 8 107 3.36e-32 118
MS.gene68386.t1 MTR_4g097570 55.102 98 42 2 22 117 13 110 9.94e-32 118
MS.gene68386.t1 MTR_0247s0040 54.455 101 46 0 22 122 8 108 1.06e-31 115
MS.gene68386.t1 MTR_5g088640 33.166 199 112 4 22 216 13 194 1.23e-31 118
MS.gene68386.t1 MTR_7g017260 38.554 166 97 2 22 185 26 188 1.37e-31 117
MS.gene68386.t1 MTR_0001s0360 53.846 104 48 0 22 125 8 111 2.14e-31 116
MS.gene68386.t1 MTR_5g088080 37.423 163 89 3 22 180 13 166 3.33e-31 116
MS.gene68386.t1 MTR_5g088150 37.423 163 89 3 22 180 13 166 3.33e-31 116
MS.gene68386.t1 MTR_5g488210 37.423 163 89 3 22 180 13 166 3.33e-31 116
MS.gene68386.t1 MTR_5g488170 37.423 163 89 3 22 180 13 166 6.37e-31 115
MS.gene68386.t1 MTR_5g062790 33.971 209 108 7 22 219 10 199 1.38e-30 115
MS.gene68386.t1 MTR_5g078860 52.885 104 49 0 22 125 8 111 1.42e-30 115
MS.gene68386.t1 MTR_0193s0090 51.961 102 49 0 22 123 8 109 2.75e-30 112
MS.gene68386.t1 MTR_5g078930 51.456 103 50 0 22 124 10 112 2.79e-30 113
MS.gene68386.t1 MTR_3g101290 50.485 103 50 1 23 125 37 138 2.94e-30 113
MS.gene68386.t1 MTR_4g029540 44.262 122 63 2 22 138 11 132 3.43e-30 114
MS.gene68386.t1 MTR_6g055910 65.753 73 25 0 52 124 16 88 6.55e-30 112
MS.gene68386.t1 MTR_5g078950 50.495 101 50 0 22 122 8 108 2.82e-29 111
MS.gene68386.t1 MTR_5g016510 48.113 106 52 2 23 127 5 108 1.72e-28 110
MS.gene68386.t1 MTR_5g088610 46.429 112 56 2 22 129 10 121 2.07e-28 111
MS.gene68386.t1 MTR_3g045430 49.524 105 53 0 20 124 12 116 3.15e-28 109
MS.gene68386.t1 MTR_6g015455 49.515 103 49 2 23 124 5 105 6.94e-28 112
MS.gene68386.t1 MTR_4g094982 46.667 105 55 1 23 127 5 108 1.24e-27 107
MS.gene68386.t1 MTR_7g111290 72.727 66 18 0 52 117 1 66 1.29e-27 108
MS.gene68386.t1 MTR_5g070020 51.000 100 46 2 19 117 118 215 6.85e-27 107
MS.gene68386.t1 MTR_5g049190 51.042 96 44 2 23 117 19 112 1.45e-26 103
MS.gene68386.t1 MTR_5g007300 53.947 76 35 0 22 97 65 140 1.61e-26 100
MS.gene68386.t1 MTR_4g019370 49.038 104 50 2 23 125 38 139 1.67e-26 105
MS.gene68386.t1 MTR_5g082910 48.000 100 49 2 23 121 19 116 5.43e-25 100
MS.gene68386.t1 MTR_3g463400 42.400 125 64 3 23 141 133 255 1.32e-24 102
MS.gene68386.t1 MTR_3g077650 29.596 223 140 5 23 244 181 387 1.39e-24 102
MS.gene68386.t1 MTR_4g105660 50.000 96 45 2 23 117 180 273 3.81e-24 100
MS.gene68386.t1 MTR_7g061330 47.573 103 51 2 23 124 113 213 1.21e-23 99.8
MS.gene68386.t1 MTR_7g061330 38.000 100 60 2 23 121 61 159 2.67e-12 66.6
MS.gene68386.t1 MTR_7g461410 47.573 103 51 2 23 124 113 213 1.21e-23 99.8
MS.gene68386.t1 MTR_7g461410 38.000 100 60 2 23 121 61 159 2.67e-12 66.6
MS.gene68386.t1 MTR_7g037260 39.837 123 73 1 23 145 145 266 1.24e-23 98.2
MS.gene68386.t1 MTR_3g110028 44.660 103 54 2 23 124 85 185 1.51e-23 99.8
MS.gene68386.t1 MTR_7g061330 47.573 103 51 2 23 124 77 177 1.55e-23 99.4
MS.gene68386.t1 MTR_7g061330 38.000 100 60 2 23 121 25 123 2.55e-12 66.6
MS.gene68386.t1 MTR_7g451170 46.154 117 53 4 23 138 191 298 2.17e-23 98.2
MS.gene68386.t1 MTR_7g450950 32.237 152 96 2 23 168 157 307 5.98e-23 96.3
MS.gene68386.t1 MTR_1g026870 43.689 103 55 2 23 124 85 185 8.54e-23 97.8
MS.gene68386.t1 MTR_1g026870 34.000 100 64 2 23 121 33 131 1.47e-11 64.7
MS.gene68386.t1 MTR_6g074860 43.590 117 55 3 23 130 4 118 9.73e-23 93.6
MS.gene68386.t1 MTR_1g085880 47.475 99 51 1 26 123 17 115 1.72e-22 92.0
MS.gene68386.t1 MTR_5g041570 38.760 129 73 3 23 150 134 257 5.50e-22 94.4
MS.gene68386.t1 MTR_1g085770 47.475 99 51 1 26 123 17 115 5.66e-22 92.8
MS.gene68386.t1 MTR_1g057980 43.878 98 54 1 22 119 79 175 6.30e-22 92.8
MS.gene68386.t1 MTR_4g128190 35.625 160 85 5 22 178 12 156 1.12e-21 90.9
MS.gene68386.t1 MTR_4g088015 38.710 124 73 2 23 145 221 342 1.47e-21 93.2
MS.gene68386.t1 MTR_5g010650 50.000 96 45 2 23 117 110 203 1.52e-21 93.6
MS.gene68386.t1 MTR_4g082040 36.090 133 79 3 23 154 105 232 3.98e-21 92.0
MS.gene68386.t1 MTR_6g027340 42.708 96 52 2 23 117 16 109 1.01e-20 87.4
MS.gene68386.t1 MTR_4g063100 76.087 46 11 0 79 124 1 46 3.04e-20 85.9
MS.gene68386.t1 MTR_6g027360 41.837 98 54 2 23 119 78 173 3.33e-20 88.2
MS.gene68386.t1 MTR_7g061550 43.564 101 54 2 26 124 10 109 6.26e-20 88.2
MS.gene68386.t1 MTR_2g096380 71.429 49 14 0 79 127 1 49 6.51e-20 84.3
MS.gene68386.t1 MTR_7g035350 39.024 123 66 4 26 146 228 343 8.79e-20 88.2
MS.gene68386.t1 MTR_7g037130 41.228 114 63 2 23 133 145 257 1.70e-19 86.7
MS.gene68386.t1 MTR_5g038910 41.176 102 57 2 26 126 29 128 4.30e-19 85.9
MS.gene68386.t1 MTR_5g038910 41.176 102 57 2 26 126 29 128 4.55e-19 86.3
MS.gene68386.t1 MTR_3g089045 45.631 103 53 2 23 124 16 116 1.21e-18 83.6
MS.gene68386.t1 MTR_8g468380 39.091 110 64 2 26 134 25 132 2.02e-18 84.3
MS.gene68386.t1 MTR_6g027370 40.777 103 58 2 23 124 99 199 6.98e-18 82.0
MS.gene68386.t1 MTR_7g086960 43.000 100 54 2 19 117 85 182 2.29e-17 80.9
MS.gene68386.t1 MTR_0023s0210 44.737 76 42 0 22 97 8 83 4.57e-15 68.9
MS.gene68386.t1 MTR_6g055910 58.696 46 19 0 79 124 2 47 2.32e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68386.t1 AT4G13480 54.511 266 93 5 16 258 1 261 1.80e-87 261
MS.gene68386.t1 AT3G24310 59.160 262 79 8 18 258 15 269 5.83e-87 259
MS.gene68386.t1 AT3G30210 47.059 255 94 8 22 258 28 259 3.88e-64 202
MS.gene68386.t1 AT3G46130 40.000 255 132 4 15 258 3 247 5.01e-54 175
MS.gene68386.t1 AT5G59780 69.725 109 33 0 18 126 5 113 4.30e-53 172
MS.gene68386.t1 AT3G27810 69.091 110 33 1 17 126 17 125 3.27e-52 169
MS.gene68386.t1 AT1G48000 71.429 105 30 0 22 126 33 137 1.21e-51 169
MS.gene68386.t1 AT5G40350 70.588 102 30 0 22 123 18 119 1.82e-51 167
MS.gene68386.t1 AT1G68320 66.972 109 36 0 18 126 16 124 4.09e-51 169
MS.gene68386.t1 AT1G25340 67.619 105 34 0 22 126 19 123 3.21e-50 166
MS.gene68386.t1 AT2G47190 66.981 106 35 0 22 127 21 126 1.32e-49 164
MS.gene68386.t1 AT3G01530 58.730 126 52 0 1 126 5 130 3.73e-49 161
MS.gene68386.t1 AT1G06180 61.062 113 44 0 22 134 13 125 1.55e-46 155
MS.gene68386.t1 AT3G53200 65.421 107 37 0 18 124 6 112 1.97e-46 155
MS.gene68386.t1 AT5G14750 62.500 104 39 0 21 124 16 119 3.16e-46 153
MS.gene68386.t1 AT5G40330 61.111 108 42 0 17 124 8 115 4.14e-46 154
MS.gene68386.t1 AT5G49620 68.750 112 35 0 15 126 20 131 8.60e-46 155
MS.gene68386.t1 AT1G25340 64.762 105 32 1 22 126 19 118 1.27e-45 154
MS.gene68386.t1 AT1G25340 64.762 105 32 1 22 126 19 118 2.14e-45 154
MS.gene68386.t1 AT5G10280 60.000 110 44 0 15 124 6 115 2.44e-45 155
MS.gene68386.t1 AT1G35515 62.832 113 42 0 15 127 6 118 2.60e-45 151
MS.gene68386.t1 AT1G22640 66.667 102 34 0 23 124 14 115 2.69e-45 153
MS.gene68386.t1 AT3G06490 66.964 112 36 1 16 126 13 124 5.56e-45 154
MS.gene68386.t1 AT3G62610 62.963 108 40 0 22 129 13 120 1.63e-44 153
MS.gene68386.t1 AT4G28110 62.136 103 39 0 22 124 13 115 2.17e-44 151
MS.gene68386.t1 AT3G27920 44.242 165 90 1 17 179 10 174 5.33e-44 149
MS.gene68386.t1 AT5G60890 59.821 112 45 0 15 126 6 117 6.06e-44 150
MS.gene68386.t1 AT5G07690 63.810 105 38 0 19 123 10 114 6.93e-44 151
MS.gene68386.t1 AT2G31180 62.136 103 39 0 22 124 13 115 7.26e-44 149
MS.gene68386.t1 AT4G09460 65.686 102 35 0 23 124 14 115 8.08e-44 148
MS.gene68386.t1 AT5G26660 59.649 114 46 0 13 126 4 117 1.17e-43 151
MS.gene68386.t1 AT5G16770 59.091 110 45 0 15 124 6 115 1.19e-43 150
MS.gene68386.t1 AT5G16770 59.091 110 45 0 15 124 6 115 1.19e-43 150
MS.gene68386.t1 AT5G54230 63.107 103 38 0 22 124 13 115 1.22e-43 150
MS.gene68386.t1 AT5G65230 60.185 108 43 0 17 124 8 115 1.36e-43 150
MS.gene68386.t1 AT3G02940 59.091 110 45 0 15 124 6 115 1.45e-43 150
MS.gene68386.t1 AT4G34990 43.605 172 95 1 15 186 6 175 1.82e-43 149
MS.gene68386.t1 AT1G09540 59.649 114 46 0 13 126 4 117 2.07e-43 151
MS.gene68386.t1 AT2G16720 60.909 110 43 0 15 124 6 115 2.26e-43 148
MS.gene68386.t1 AT1G66230 53.846 130 51 1 22 142 13 142 2.26e-43 149
MS.gene68386.t1 AT5G16770 59.091 110 45 0 15 124 6 115 2.43e-43 150
MS.gene68386.t1 AT5G16770 59.091 110 45 0 15 124 6 115 2.43e-43 150
MS.gene68386.t1 AT2G32460 58.407 113 47 0 14 126 11 123 2.50e-43 153
MS.gene68386.t1 AT4G05100 61.165 103 40 0 22 124 14 116 2.78e-43 149
MS.gene68386.t1 AT3G02940 59.091 110 45 0 15 124 6 115 2.89e-43 149
MS.gene68386.t1 AT3G02940 59.091 110 45 0 15 124 6 115 2.89e-43 149
MS.gene68386.t1 AT5G16600 48.428 159 64 4 22 164 13 169 2.89e-43 149
MS.gene68386.t1 AT3G47600 48.052 154 74 1 22 169 13 166 4.25e-43 149
MS.gene68386.t1 AT4G21440 57.273 110 47 0 15 124 6 115 5.43e-43 149
MS.gene68386.t1 AT1G57560 50.355 141 61 1 13 144 4 144 6.48e-43 147
MS.gene68386.t1 AT1G34670 59.091 110 45 0 15 124 6 115 7.13e-43 149
MS.gene68386.t1 AT5G07700 58.772 114 41 1 11 124 8 115 8.10e-43 149
MS.gene68386.t1 AT5G07700 58.772 114 41 1 11 124 8 115 8.10e-43 149
MS.gene68386.t1 AT3G13540 62.136 103 39 0 22 124 24 126 8.40e-43 146
MS.gene68386.t1 AT5G61420 61.321 106 41 0 19 124 10 115 8.54e-43 149
MS.gene68386.t1 AT2G32460 60.952 105 41 0 22 126 7 111 1.03e-42 151
MS.gene68386.t1 AT4G12350 62.136 103 39 0 22 124 13 115 1.04e-42 147
MS.gene68386.t1 AT1G57560 58.929 112 46 0 13 124 4 115 1.10e-42 147
MS.gene68386.t1 AT3G01140 64.078 103 37 0 22 124 13 115 1.66e-42 148
MS.gene68386.t1 AT3G11440 60.000 105 42 0 20 124 40 144 2.28e-42 150
MS.gene68386.t1 AT1G18570 64.078 103 37 0 22 124 14 116 2.45e-42 148
MS.gene68386.t1 AT4G38620 60.952 105 41 0 23 127 14 118 2.54e-42 146
MS.gene68386.t1 AT2G47460 54.331 127 47 1 22 148 13 128 2.65e-42 148
MS.gene68386.t1 AT3G13890 55.357 112 50 0 13 124 4 115 3.04e-42 147
MS.gene68386.t1 AT3G01140 64.078 103 37 0 22 124 56 158 3.41e-42 148
MS.gene68386.t1 AT5G49620 61.111 126 35 1 15 126 20 145 3.79e-42 146
MS.gene68386.t1 AT5G15310 63.107 103 38 0 22 124 13 115 4.04e-42 144
MS.gene68386.t1 AT5G62470 48.649 148 75 1 22 169 13 159 6.84e-42 147
MS.gene68386.t1 AT4G22680 38.679 212 109 3 22 231 13 205 7.22e-42 144
MS.gene68386.t1 AT4G26930 44.970 169 85 3 1 167 3 165 1.05e-41 147
MS.gene68386.t1 AT5G15310 63.107 103 38 0 22 124 13 115 1.05e-41 145
MS.gene68386.t1 AT3G61250 59.223 103 42 0 22 124 13 115 1.11e-41 145
MS.gene68386.t1 AT5G15310 63.107 103 38 0 22 124 13 115 1.14e-41 145
MS.gene68386.t1 AT3G11440 60.000 105 42 0 20 124 40 144 1.52e-41 149
MS.gene68386.t1 AT3G11440 60.000 105 42 0 20 124 40 144 1.52e-41 149
MS.gene68386.t1 AT3G11440 60.000 105 42 0 20 124 40 144 1.52e-41 149
MS.gene68386.t1 AT1G08810 54.918 122 54 1 22 143 13 133 1.56e-41 144
MS.gene68386.t1 AT5G52600 59.615 104 42 0 22 125 13 116 1.90e-41 141
MS.gene68386.t1 AT5G06100 57.522 113 42 1 12 124 29 135 4.54e-41 146
MS.gene68386.t1 AT3G23250 52.991 117 55 0 22 138 13 129 9.67e-41 142
MS.gene68386.t1 AT5G49330 62.136 103 39 0 22 124 13 115 1.09e-40 143
MS.gene68386.t1 AT5G62320 60.000 110 37 1 22 124 14 123 1.27e-40 140
MS.gene68386.t1 AT5G06100 57.522 113 42 1 12 124 29 135 1.90e-40 146
MS.gene68386.t1 AT5G06100 57.522 113 42 1 12 124 29 135 1.90e-40 146
MS.gene68386.t1 AT5G06100 57.522 113 42 1 12 124 29 135 1.90e-40 146
MS.gene68386.t1 AT5G06100 57.522 113 42 1 12 124 29 135 1.90e-40 146
MS.gene68386.t1 AT1G63910 53.448 116 54 0 13 128 4 119 3.25e-40 142
MS.gene68386.t1 AT5G55020 60.577 104 41 0 20 123 25 128 3.58e-40 145
MS.gene68386.t1 AT4G01680 57.018 114 49 0 13 126 4 117 3.87e-40 139
MS.gene68386.t1 AT1G74080 61.905 105 40 0 19 123 10 114 4.62e-40 141
MS.gene68386.t1 AT3G08500 60.952 105 41 0 22 126 31 135 5.06e-40 141
MS.gene68386.t1 AT5G62470 48.649 148 74 2 22 169 13 158 6.06e-40 141
MS.gene68386.t1 AT4G01680 57.018 114 49 0 13 126 4 117 1.02e-39 140
MS.gene68386.t1 AT5G12870 59.048 105 43 0 22 126 19 123 1.22e-39 139
MS.gene68386.t1 AT4G17785 61.165 103 40 0 22 124 14 116 1.37e-39 140
MS.gene68386.t1 AT1G74430 58.182 110 45 1 22 130 13 122 1.46e-39 138
MS.gene68386.t1 AT4G17785 61.165 103 40 0 22 124 14 116 1.70e-39 140
MS.gene68386.t1 AT2G26960 61.165 103 40 0 21 123 20 122 2.39e-39 141
MS.gene68386.t1 AT1G74650 61.165 103 40 0 22 124 13 115 2.91e-39 139
MS.gene68386.t1 AT3G13890 51.240 121 50 1 13 124 4 124 3.07e-39 140
MS.gene68386.t1 AT3G12720 51.304 115 56 0 10 124 11 125 3.69e-39 138
MS.gene68386.t1 AT1G79180 55.652 115 50 1 22 135 15 129 4.17e-39 138
MS.gene68386.t1 AT4G25560 36.596 235 138 4 22 246 11 244 8.81e-39 137
MS.gene68386.t1 AT3G46130 37.500 232 120 5 38 258 8 225 1.65e-38 134
MS.gene68386.t1 AT3G28910 60.194 103 41 0 22 124 13 115 1.68e-38 137
MS.gene68386.t1 AT3G46130 38.249 217 113 4 53 258 9 215 2.33e-38 134
MS.gene68386.t1 AT5G35550 53.390 118 54 1 7 124 1 117 3.80e-38 134
MS.gene68386.t1 AT1G56160 56.311 103 45 0 22 124 15 117 3.81e-38 135
MS.gene68386.t1 AT1G16490 55.340 103 46 0 22 124 15 117 4.92e-38 134
MS.gene68386.t1 AT5G59780 79.452 73 15 0 54 126 20 92 1.39e-37 132
MS.gene68386.t1 AT3G48920 57.547 106 45 0 18 123 15 120 1.88e-37 132
MS.gene68386.t1 AT5G14340 58.491 106 44 0 22 127 25 130 2.46e-37 132
MS.gene68386.t1 AT4G01680 52.381 126 48 1 13 126 4 129 4.40e-37 134
MS.gene68386.t1 AT4G37780 57.692 104 43 1 22 124 13 116 2.26e-36 131
MS.gene68386.t1 AT5G56110 56.481 108 47 0 17 124 8 115 2.78e-36 131
MS.gene68386.t1 AT5G52260 58.252 103 43 0 22 124 13 115 3.71e-36 129
MS.gene68386.t1 AT3G28470 57.143 98 42 0 22 119 13 110 3.94e-36 130
MS.gene68386.t1 AT3G12820 55.340 103 46 0 22 124 15 117 5.53e-36 128
MS.gene68386.t1 AT3G27810 73.973 73 19 0 54 126 4 76 6.29e-36 126
MS.gene68386.t1 AT5G40350 74.286 70 18 0 54 123 5 74 1.00e-34 123
MS.gene68386.t1 AT1G66370 56.311 103 45 0 22 124 9 111 1.39e-34 125
MS.gene68386.t1 AT5G57620 56.731 104 44 1 22 124 13 116 1.71e-34 127
MS.gene68386.t1 AT1G18710 53.398 103 48 0 22 124 13 115 2.32e-34 125
MS.gene68386.t1 AT3G49690 55.140 107 47 1 22 127 13 119 6.33e-34 125
MS.gene68386.t1 AT5G65790 54.206 107 48 1 22 127 13 119 1.29e-33 125
MS.gene68386.t1 AT3G53200 74.648 71 18 0 54 124 9 79 1.66e-33 120
MS.gene68386.t1 AT5G23000 54.808 104 46 1 22 124 13 116 2.44e-33 124
MS.gene68386.t1 AT1G79180 42.568 148 51 2 22 135 15 162 1.07e-32 122
MS.gene68386.t1 AT2G36890 53.846 104 47 1 22 124 13 116 2.17e-32 120
MS.gene68386.t1 AT2G36890 53.846 104 47 1 22 124 54 157 4.89e-32 120
MS.gene68386.t1 AT2G26950 52.000 100 48 0 18 117 13 112 1.42e-31 120
MS.gene68386.t1 AT3G60460 48.649 111 56 1 17 126 7 117 2.84e-31 117
MS.gene68386.t1 AT1G66380 56.311 103 45 0 22 124 9 111 3.88e-31 112
MS.gene68386.t1 AT1G56650 55.340 103 46 0 22 124 9 111 1.69e-30 114
MS.gene68386.t1 AT1G66390 56.311 103 45 0 22 124 9 111 2.35e-30 114
MS.gene68386.t1 AT5G26660 69.863 73 22 0 54 126 14 86 3.59e-30 115
MS.gene68386.t1 AT3G47600 46.721 122 59 1 54 169 39 160 2.02e-28 110
MS.gene68386.t1 AT5G14750 58.025 81 29 1 49 124 5 85 7.39e-28 105
MS.gene68386.t1 AT5G58850 48.031 127 51 4 23 136 105 229 5.67e-27 108
MS.gene68386.t1 AT5G35550 61.842 76 29 0 49 124 45 120 6.73e-27 105
MS.gene68386.t1 AT3G12820 66.176 68 23 0 57 124 2 69 8.42e-27 103
MS.gene68386.t1 AT3G27785 51.579 95 45 1 23 117 189 282 8.53e-27 108
MS.gene68386.t1 AT2G23290 49.038 104 50 2 23 125 13 114 8.85e-27 105
MS.gene68386.t1 AT2G39880 48.544 103 50 2 23 124 50 150 7.89e-26 104
MS.gene68386.t1 AT3G09230 47.414 116 54 3 23 137 55 164 8.64e-26 104
MS.gene68386.t1 AT4G37260 46.602 103 54 1 23 125 13 114 1.13e-25 103
MS.gene68386.t1 AT3G55730 48.544 103 50 2 23 124 56 156 2.93e-25 103
MS.gene68386.t1 AT4G18770 48.421 95 48 1 23 117 217 310 6.38e-25 102
MS.gene68386.t1 AT5G02320 46.602 103 52 2 23 124 127 227 9.71e-25 103
MS.gene68386.t1 AT5G02320 37.000 100 61 2 23 121 75 173 9.07e-12 65.1
MS.gene68386.t1 AT5G02320 46.602 103 52 2 23 124 127 227 9.71e-25 103
MS.gene68386.t1 AT5G02320 37.000 100 61 2 23 121 75 173 9.07e-12 65.1
MS.gene68386.t1 AT5G02320 46.602 103 52 2 23 124 67 167 1.25e-24 102
MS.gene68386.t1 AT5G02320 37.000 100 61 2 23 121 15 113 9.24e-12 65.1
MS.gene68386.t1 AT5G11050 50.000 96 45 2 23 117 105 198 1.54e-24 101
MS.gene68386.t1 AT3G50060 44.231 104 55 2 23 125 6 107 1.99e-24 99.4
MS.gene68386.t1 AT3G09370 45.714 105 54 2 23 126 135 237 2.51e-24 101
MS.gene68386.t1 AT3G09370 37.000 100 61 2 23 121 83 181 7.28e-11 62.4
MS.gene68386.t1 AT3G09370 45.714 105 54 2 23 126 143 245 2.86e-24 101
MS.gene68386.t1 AT3G09370 37.000 100 61 2 23 121 91 189 5.76e-11 62.8
MS.gene68386.t1 AT3G09370 45.714 105 54 2 23 126 130 232 2.90e-24 101
MS.gene68386.t1 AT3G09370 37.000 100 61 2 23 121 78 176 8.48e-11 62.0
MS.gene68386.t1 AT5G11510 43.689 103 55 2 23 124 81 181 3.50e-23 99.0
MS.gene68386.t1 AT5G11510 36.000 100 62 2 23 121 29 127 9.39e-12 65.1
MS.gene68386.t1 AT5G11510 43.689 103 55 2 23 124 81 181 3.64e-23 98.6
MS.gene68386.t1 AT5G11510 36.000 100 62 2 23 121 29 127 9.30e-12 65.1
MS.gene68386.t1 AT5G11510 43.689 103 55 2 23 124 81 181 3.64e-23 99.0
MS.gene68386.t1 AT5G11510 36.000 100 62 2 23 121 29 127 1.26e-11 64.7
MS.gene68386.t1 AT5G11510 43.689 103 55 2 23 124 81 181 3.64e-23 99.0
MS.gene68386.t1 AT5G11510 36.000 100 62 2 23 121 29 127 1.26e-11 64.7
MS.gene68386.t1 AT5G11510 43.689 103 55 2 23 124 81 181 3.64e-23 99.0
MS.gene68386.t1 AT5G11510 36.000 100 62 2 23 121 29 127 1.26e-11 64.7
MS.gene68386.t1 AT5G67300 44.231 104 55 2 23 125 6 107 1.26e-22 94.7
MS.gene68386.t1 AT5G40360 36.641 131 76 3 17 141 152 281 1.79e-22 95.1
MS.gene68386.t1 AT1G17950 44.762 105 55 2 23 126 5 107 4.96e-22 92.0
MS.gene68386.t1 AT4G32730 42.718 103 56 2 23 124 87 187 5.50e-22 95.5
MS.gene68386.t1 AT4G32730 42.718 103 56 2 23 124 87 187 5.50e-22 95.5
MS.gene68386.t1 AT4G32730 42.718 103 56 2 23 124 87 187 5.50e-22 95.5
MS.gene68386.t1 AT4G32730 42.718 103 56 2 23 124 87 187 5.50e-22 95.5
MS.gene68386.t1 AT4G32730 42.718 103 56 2 23 124 87 187 5.61e-22 95.1
MS.gene68386.t1 AT4G32730 30.252 119 81 2 4 121 16 133 9.89e-11 62.0
MS.gene68386.t1 AT5G59780 79.167 48 10 0 79 126 1 48 6.53e-22 89.7
MS.gene68386.t1 AT3G46130 32.984 191 107 4 79 258 1 181 9.47e-22 89.7
MS.gene68386.t1 AT1G69560 43.689 103 55 2 23 124 107 207 1.57e-21 92.0
MS.gene68386.t1 AT1G26780 40.870 115 65 2 23 136 98 210 1.66e-21 91.3
MS.gene68386.t1 AT1G69560 42.857 105 57 2 23 126 123 225 1.68e-21 92.4
MS.gene68386.t1 AT1G26780 42.593 108 59 2 20 126 95 200 2.34e-21 92.0
MS.gene68386.t1 AT1G73410 45.714 105 54 2 23 126 6 108 3.15e-21 89.7
MS.gene68386.t1 AT1G73410 45.714 105 54 2 23 126 6 108 4.93e-21 88.2
MS.gene68386.t1 AT1G22640 65.517 58 20 0 67 124 1 58 5.02e-21 88.2
MS.gene68386.t1 AT1G66380 55.844 77 34 0 48 124 2 78 5.71e-21 85.5
MS.gene68386.t1 AT3G23250 55.556 72 32 0 67 138 1 72 8.41e-21 88.2
MS.gene68386.t1 AT5G14750 60.345 58 23 0 67 124 1 58 5.60e-20 84.0
MS.gene68386.t1 AT5G14750 60.345 58 23 0 67 124 1 58 5.60e-20 84.0
MS.gene68386.t1 AT3G29020 38.318 107 65 1 20 126 62 167 9.69e-20 85.5
MS.gene68386.t1 AT3G29020 38.318 107 65 1 20 126 64 169 1.86e-19 85.9
MS.gene68386.t1 AT1G14350 38.843 121 69 3 26 145 28 144 1.93e-19 87.4
MS.gene68386.t1 AT1G14350 38.843 121 69 3 26 145 28 144 1.93e-19 87.4
MS.gene68386.t1 AT4G33450 39.474 114 66 2 23 135 19 130 2.79e-19 84.7
MS.gene68386.t1 AT5G17800 37.500 120 71 2 7 126 80 195 3.83e-19 85.5
MS.gene68386.t1 AT2G02820 41.441 111 58 2 26 133 33 139 1.25e-18 84.3
MS.gene68386.t1 AT2G02820 41.441 111 58 2 26 133 33 139 1.71e-18 84.7
MS.gene68386.t1 AT2G02820 41.441 111 58 2 26 133 33 139 2.44e-18 84.3
MS.gene68386.t1 AT2G25230 42.105 95 52 2 26 119 29 121 3.81e-18 81.3
MS.gene68386.t1 AT1G71030 37.755 98 57 1 60 153 5 102 4.91e-18 79.7
MS.gene68386.t1 AT2G37630 40.594 101 57 2 26 124 7 106 6.67e-18 82.4
MS.gene68386.t1 AT1G71030 37.000 100 59 1 60 155 19 118 8.17e-18 79.3
MS.gene68386.t1 AT1G66380 50.000 80 40 0 22 101 9 88 1.40e-17 76.6
MS.gene68386.t1 AT1G18960 38.235 102 60 2 23 124 10 108 6.14e-17 79.0
MS.gene68386.t1 AT4G00540 41.509 106 56 3 23 124 103 206 3.80e-16 77.8
MS.gene68386.t1 AT4G00540 41.509 106 56 3 23 124 101 204 5.30e-16 77.4
MS.gene68386.t1 AT5G39700 36.735 98 61 1 22 119 55 151 2.53e-14 69.7
MS.gene68386.t1 AT4G25560 30.899 178 112 4 79 246 2 178 6.73e-14 69.3
MS.gene68386.t1 AT5G40430 38.776 98 56 3 23 119 54 148 1.08e-13 69.3
MS.gene68386.t1 AT1G14350 41.463 82 46 1 64 145 22 101 1.25e-12 67.4
MS.gene68386.t1 AT1G14350 41.463 82 46 1 64 145 22 101 1.25e-12 67.4
MS.gene68386.t1 AT3G18100 36.082 97 61 1 22 118 497 592 1.55e-11 64.7
MS.gene68386.t1 AT3G18100 36.082 97 61 1 22 118 545 640 1.62e-11 64.3
MS.gene68386.t1 AT3G18100 36.082 97 61 1 22 118 384 479 1.77e-11 64.3
MS.gene68386.t1 AT3G18100 36.082 97 61 1 22 118 332 427 2.13e-11 63.9
MS.gene68386.t1 AT5G61420 74.286 35 9 0 90 124 2 36 6.02e-11 62.0

Find 61 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGATCATCTGTTGTATT+TGG 0.168813 1.3:+27246965 None:intergenic
GTTGGATGGTCTGTGGAATT+TGG 0.261417 1.3:-27246885 MS.gene68386:CDS
AACTCAGTTGCTAGGCTTAC+AGG 0.272684 1.3:-27248131 MS.gene68386:intron
ATTTCATTGTCTGTTCTTCC+TGG 0.287218 1.3:+27247244 None:intergenic
CCATGATACCATGACCAATT+TGG 0.296887 1.3:+27248243 None:intergenic
CATGTTGAAAATTTCTTGTC+TGG 0.326162 1.3:+27246991 None:intergenic
CTATCATCTTCTGTTGCATT+AGG 0.338553 1.3:+27246911 None:intergenic
ACAATGAAATAAAGAATTAC+TGG 0.345073 1.3:-27247231 MS.gene68386:CDS
ACATTTGATTCTACATGTAT+TGG 0.353073 1.3:-27248283 None:intergenic
TCCAAATACAACAGATGATC+AGG 0.360219 1.3:-27246966 MS.gene68386:CDS
ATAACTGCTTTCTCAGAAAT+CGG 0.374451 1.3:+27247149 None:intergenic
CAGGGTTACTTTATGCTCAA+TGG 0.388112 1.3:-27246947 MS.gene68386:CDS
TGTCTGGCTTGAGATATATA+AGG 0.396316 1.3:+27247007 None:intergenic
ATCTAAGACCTGATCTCAAA+AGG 0.406655 1.3:-27247637 MS.gene68386:CDS
GGTTGTTGATTGACTATGTT+AGG 0.410992 1.3:-27248175 MS.gene68386:CDS
GAGATATATAAGGAATTCTA+TGG 0.419104 1.3:+27247017 None:intergenic
AATATTATGCTTTCTTCTTG+TGG 0.423745 1.3:+27247602 None:intergenic
TTCATGCTAGGTGGGGAAAC+AGG 0.426004 1.3:-27247574 MS.gene68386:intron
TCTAAGACCTGATCTCAAAA+GGG 0.452488 1.3:-27247636 MS.gene68386:CDS
TATTGTGAATAGGATTGAAA+AGG 0.465627 1.3:-27247694 MS.gene68386:intron
GGAGTGATGGCAGGCCAAAT+TGG 0.469256 1.3:-27248257 MS.gene68386:CDS
TCCATTTGATGCTTCCGAAA+AGG 0.471438 1.3:-27247179 MS.gene68386:CDS
GTATCATGGAGGAAGAGGTT+TGG 0.478271 1.3:-27248229 MS.gene68386:CDS
CCAAATTGGTCATGGTATCA+TGG 0.489340 1.3:-27248243 MS.gene68386:CDS
TGAATAGGATTGAAAAGGAA+TGG 0.493359 1.3:-27247689 MS.gene68386:intron
AACAGAAGATGATAGTTTGT+TGG 0.498647 1.3:-27246903 MS.gene68386:CDS
ACAACAACTGCAATTCAACT+TGG 0.507410 1.3:-27247080 MS.gene68386:CDS
TCTAAGTAAAACTAACAGTA+AGG 0.510800 1.3:+27246794 None:intergenic
GGCTGCATGGTGAAGGCAGA+TGG 0.514412 1.3:-27248154 MS.gene68386:CDS
GAGGAAGAGGTTTGGAGGAA+AGG 0.515111 1.3:-27248221 MS.gene68386:CDS
ATGGAAAGAGTTGCAGATTG+AGG 0.519759 1.3:-27247670 MS.gene68386:CDS
ATTAGAGCTTCATGCTAGGT+GGG 0.524194 1.3:-27247582 MS.gene68386:CDS
TCATGGTATCATGGAGGAAG+AGG 0.529376 1.3:-27248234 MS.gene68386:CDS
TGGAATTTGGATGATGTTCA+AGG 0.535682 1.3:-27246872 MS.gene68386:CDS
TCATGGAGGAAGAGGTTTGG+AGG 0.542638 1.3:-27248226 MS.gene68386:CDS
ATTGACTATGTTAGGCTGCA+TGG 0.543560 1.3:-27248167 MS.gene68386:CDS
AGGTGTCATGTCCATGTTTG+AGG 0.551244 1.3:-27247050 MS.gene68386:CDS
CATGGACTGCTGAAGAGGAT+AGG 0.552283 1.3:-27248196 MS.gene68386:CDS
GCTAATGCAACAAACAAAGC+TGG 0.555726 1.3:-27246836 MS.gene68386:CDS
CAATTCAACTTGGACATGAA+AGG 0.556323 1.3:-27247070 MS.gene68386:CDS
CTATCCTCTTCAGCAGTCCA+TGG 0.557457 1.3:+27248197 None:intergenic
CATGTATTGGCGTGGAGTGA+TGG 0.557598 1.3:-27248270 MS.gene68386:CDS
GAAGATGATAGTTTGTTGGA+TGG 0.563995 1.3:-27246899 MS.gene68386:CDS
ACAATTGCAAGAAGTTTACC+AGG 0.565868 1.3:-27247262 MS.gene68386:CDS
GCAGATGGAACTCAGTTGCT+AGG 0.568807 1.3:-27248139 MS.gene68386:CDS
TATTGGCGTGGAGTGATGGC+AGG 0.570660 1.3:-27248266 MS.gene68386:CDS
AGGACCATGGACTGCTGAAG+AGG 0.572659 1.3:-27248201 MS.gene68386:CDS
TATTAGAGCTTCATGCTAGG+TGG 0.600065 1.3:-27247583 MS.gene68386:CDS
TAATATTAGAGCTTCATGCT+AGG 0.601475 1.3:-27247586 MS.gene68386:CDS
TGATTCTACATGTATTGGCG+TGG 0.606123 1.3:-27248278 None:intergenic
ATAGTTTGTTGGATGGTCTG+TGG 0.607091 1.3:-27246892 MS.gene68386:CDS
TATGTTAGGCTGCATGGTGA+AGG 0.611355 1.3:-27248161 MS.gene68386:CDS
ATGGCAGGCCAAATTGGTCA+TGG 0.615150 1.3:-27248251 MS.gene68386:CDS
TTAGAGCTTCATGCTAGGTG+GGG 0.621689 1.3:-27247581 MS.gene68386:CDS
CTAAGACCTGATCTCAAAAG+GGG 0.623043 1.3:-27247635 MS.gene68386:CDS
AAAGAGTTGCAGATTGAGGT+GGG 0.627035 1.3:-27247666 MS.gene68386:CDS
GAAAGAGTTGCAGATTGAGG+TGG 0.638530 1.3:-27247667 MS.gene68386:CDS
AGGTTTGGAGGAAAGGACCA+TGG 0.648109 1.3:-27248214 MS.gene68386:CDS
CCAAATACAACAGATGATCA+GGG 0.652014 1.3:-27246965 MS.gene68386:CDS
ATGAAATAAAGAATTACTGG+AGG 0.671820 1.3:-27247228 MS.gene68386:CDS
AATTGGTCATGGTATCATGG+AGG 0.749718 1.3:-27248240 MS.gene68386:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGAAAAAAAATATATGTTG+CGG - chr1.3:27247235-27247254 MS.gene68386:CDS 15.0%
!! CTGAAAATTTACAAATTTAT+TGG + chr1.3:27247785-27247804 None:intergenic 15.0%
!!! TAAATTTGTAAATTTTCAGA+TGG - chr1.3:27247786-27247805 MS.gene68386:intron 15.0%
!!! TTATTGTTTTTATTGTGAAT+AGG - chr1.3:27247370-27247389 MS.gene68386:intron 15.0%
!! ACAATGAAATAAAGAATTAC+TGG - chr1.3:27247843-27247862 MS.gene68386:intron 20.0%
! AATATTATGCTTTCTTCTTG+TGG + chr1.3:27247475-27247494 None:intergenic 25.0%
! AATGTCTATGTTTCATATAC+TGG - chr1.3:27247733-27247752 MS.gene68386:intron 25.0%
! ATGAAATAAAGAATTACTGG+AGG - chr1.3:27247846-27247865 MS.gene68386:intron 25.0%
! ATGTAGCTCAAAAATATTTG+AGG + chr1.3:27247540-27247559 None:intergenic 25.0%
! GAGATATATAAGGAATTCTA+TGG + chr1.3:27248060-27248079 None:intergenic 25.0%
! TATAGTAGATAAGTTTCAAG+AGG - chr1.3:27247198-27247217 MS.gene68386:CDS 25.0%
! TATTGTGAATAGGATTGAAA+AGG - chr1.3:27247380-27247399 MS.gene68386:intron 25.0%
!! ATTTTATCTGCTATAGCAAT+AGG - chr1.3:27247148-27247167 MS.gene68386:CDS 25.0%
!!! GCTACATGTTTTTTTATGAT+TGG - chr1.3:27247553-27247572 MS.gene68386:intron 25.0%
AGAAACGAGTAGAAAAAGAT+TGG + chr1.3:27246979-27246998 None:intergenic 30.0%
ATAACTGCTTTCTCAGAAAT+CGG + chr1.3:27247928-27247947 None:intergenic 30.0%
CATGTTGAAAATTTCTTGTC+TGG + chr1.3:27248086-27248105 None:intergenic 30.0%
GCTAACAAAAAACTTGATCA+TGG + chr1.3:27247308-27247327 None:intergenic 30.0%
TAATATTAGAGCTTCATGCT+AGG - chr1.3:27247488-27247507 MS.gene68386:intron 30.0%
TATGTTTCATATACTGGCAA+AGG - chr1.3:27247739-27247758 MS.gene68386:intron 30.0%
TGAAACTTATCTACTATAGC+AGG + chr1.3:27247196-27247215 None:intergenic 30.0%
TGAATAGGATTGAAAAGGAA+TGG - chr1.3:27247385-27247404 MS.gene68386:intron 30.0%
! AACAGAAGATGATAGTTTGT+TGG - chr1.3:27248171-27248190 MS.gene68386:CDS 30.0%
!! AATAGTAGCATTGATAGTGA+TGG - chr1.3:27247089-27247108 MS.gene68386:CDS 30.0%
!!! TTTTTTTCATGTCTCTGCAA+TGG + chr1.3:27247225-27247244 None:intergenic 30.0%
ACAACAACTGCAATTCAACT+TGG - chr1.3:27247994-27248013 MS.gene68386:intron 35.0%
ACAATTGCAAGAAGTTTACC+AGG - chr1.3:27247812-27247831 MS.gene68386:intron 35.0%
ATTTCATTGTCTGTTCTTCC+TGG + chr1.3:27247833-27247852 None:intergenic 35.0%
CAATTCAACTTGGACATGAA+AGG - chr1.3:27248004-27248023 MS.gene68386:intron 35.0%
CCAAATACAACAGATGATCA+GGG - chr1.3:27248109-27248128 MS.gene68386:intron 35.0%
CTATCATCTTCTGTTGCATT+AGG + chr1.3:27248166-27248185 None:intergenic 35.0%
CTTATCTACTATAGCAGGTA+AGG + chr1.3:27247191-27247210 None:intergenic 35.0%
TCCAAATACAACAGATGATC+AGG - chr1.3:27248108-27248127 MS.gene68386:intron 35.0%
TGGAATTTGGATGATGTTCA+AGG - chr1.3:27248202-27248221 MS.gene68386:CDS 35.0%
! ACTCCTTCTATAAGAAGTGT+CGG + chr1.3:27247591-27247610 None:intergenic 35.0%
! ATCTAAGACCTGATCTCAAA+AGG - chr1.3:27247437-27247456 MS.gene68386:intron 35.0%
! GCTATTGTTTTCCTCAAACA+TGG + chr1.3:27248038-27248057 None:intergenic 35.0%
! GGTTGTTGATTGACTATGTT+AGG - chr1.3:27246899-27246918 MS.gene68386:CDS 35.0%
! TCTAAGACCTGATCTCAAAA+GGG - chr1.3:27247438-27247457 MS.gene68386:intron 35.0%
! TGTCTGGCTTGAGATATATA+AGG + chr1.3:27248070-27248089 None:intergenic 35.0%
!! AAATCGGTTTTTCGCCTTTT+CGG + chr1.3:27247912-27247931 None:intergenic 35.0%
!! GAAGATGATAGTTTGTTGGA+TGG - chr1.3:27248175-27248194 MS.gene68386:CDS 35.0%
AAAGAGTTGCAGATTGAGGT+GGG - chr1.3:27247408-27247427 MS.gene68386:intron 40.0%
AACCCGACACTTCTTATAGA+AGG - chr1.3:27247585-27247604 MS.gene68386:CDS 40.0%
AATTGGTCATGGTATCATGG+AGG - chr1.3:27246834-27246853 MS.gene68386:CDS 40.0%
ATGGAAAGAGTTGCAGATTG+AGG - chr1.3:27247404-27247423 MS.gene68386:intron 40.0%
ATTAGAGCTTCATGCTAGGT+GGG - chr1.3:27247492-27247511 MS.gene68386:intron 40.0%
ATTGACTATGTTAGGCTGCA+TGG - chr1.3:27246907-27246926 MS.gene68386:CDS 40.0%
CCAAATTGGTCATGGTATCA+TGG - chr1.3:27246831-27246850 MS.gene68386:CDS 40.0%
CCATGATACCATGACCAATT+TGG + chr1.3:27246834-27246853 None:intergenic 40.0%
CCCTGATCATCTGTTGTATT+TGG + chr1.3:27248112-27248131 None:intergenic 40.0%
CTAAGACCTGATCTCAAAAG+GGG - chr1.3:27247439-27247458 MS.gene68386:intron 40.0%
GCTAATGCAACAAACAAAGC+TGG - chr1.3:27248238-27248257 MS.gene68386:CDS 40.0%
GTTTCTCGTAATAGCGATCA+AGG - chr1.3:27246993-27247012 MS.gene68386:CDS 40.0%
TATTAGAGCTTCATGCTAGG+TGG - chr1.3:27247491-27247510 MS.gene68386:intron 40.0%
TCCATTTGATGCTTCCGAAA+AGG - chr1.3:27247895-27247914 MS.gene68386:intron 40.0%
! ATTGTTGTTGTTGTTGCTGC+TGG + chr1.3:27247955-27247974 None:intergenic 40.0%
! CAGGGTTACTTTATGCTCAA+TGG - chr1.3:27248127-27248146 MS.gene68386:intron 40.0%
!! AGTAGCATTGATAGTGATGG+TGG - chr1.3:27247092-27247111 MS.gene68386:CDS 40.0%
!! ATAGTTTGTTGGATGGTCTG+TGG - chr1.3:27248182-27248201 MS.gene68386:CDS 40.0%
!! CTCCTTCTATAAGAAGTGTC+GGG + chr1.3:27247590-27247609 None:intergenic 40.0%
!! TGGCAAAGGTGTTTGAATCA+AGG - chr1.3:27247753-27247772 MS.gene68386:intron 40.0%
!!! ATTTGACCCCTTTTGAGATC+AGG + chr1.3:27247448-27247467 None:intergenic 40.0%
AACTCAGTTGCTAGGCTTAC+AGG - chr1.3:27246943-27246962 MS.gene68386:CDS 45.0%
CAATGCGTCAGTGTCGTATT+TGG - chr1.3:27247706-27247725 MS.gene68386:intron 45.0%
CTCATTGGTCATGTCTACGA+TGG - chr1.3:27247116-27247135 MS.gene68386:CDS 45.0%
GAAAGAGTTGCAGATTGAGG+TGG - chr1.3:27247407-27247426 MS.gene68386:intron 45.0%
GCGGTTCAAATTGCTATCAC+AGG - chr1.3:27247254-27247273 MS.gene68386:CDS 45.0%
GTATCATGGAGGAAGAGGTT+TGG - chr1.3:27246845-27246864 MS.gene68386:CDS 45.0%
GTTGGATGGTCTGTGGAATT+TGG - chr1.3:27248189-27248208 MS.gene68386:CDS 45.0%
TATGTTAGGCTGCATGGTGA+AGG - chr1.3:27246913-27246932 MS.gene68386:CDS 45.0%
TCATGGTATCATGGAGGAAG+AGG - chr1.3:27246840-27246859 MS.gene68386:CDS 45.0%
TTAGAGCTTCATGCTAGGTG+GGG - chr1.3:27247493-27247512 MS.gene68386:intron 45.0%
! AGGTGTCATGTCCATGTTTG+AGG - chr1.3:27248024-27248043 MS.gene68386:intron 45.0%
!! GATAGTGATGGTGGTCTCAT+TGG - chr1.3:27247101-27247120 MS.gene68386:CDS 45.0%
!!! GCCTTTTCGGAAGCATCAAA+TGG + chr1.3:27247899-27247918 None:intergenic 45.0%
AGGTTTGGAGGAAAGGACCA+TGG - chr1.3:27246860-27246879 MS.gene68386:CDS 50.0%
ATGGCAGGCCAAATTGGTCA+TGG - chr1.3:27246823-27246842 MS.gene68386:CDS 50.0%
CTATCCTCTTCAGCAGTCCA+TGG + chr1.3:27246880-27246899 None:intergenic 50.0%
CTGACACCAACACGTCTTAC+TGG + chr1.3:27247616-27247635 None:intergenic 50.0%
GAGGAAGAGGTTTGGAGGAA+AGG - chr1.3:27246853-27246872 MS.gene68386:CDS 50.0%
GAGTCTCCAGTAAGACGTGT+TGG - chr1.3:27247607-27247626 MS.gene68386:CDS 50.0%
GCAGATGGAACTCAGTTGCT+AGG - chr1.3:27246935-27246954 MS.gene68386:CDS 50.0%
TCATGGAGGAAGAGGTTTGG+AGG - chr1.3:27246848-27246867 MS.gene68386:CDS 50.0%
TTCATGCTAGGTGGGGAAAC+AGG - chr1.3:27247500-27247519 MS.gene68386:intron 50.0%
! CAGTAAGACGTGTTGGTGTC+AGG - chr1.3:27247614-27247633 MS.gene68386:CDS 50.0%
! CATGGACTGCTGAAGAGGAT+AGG - chr1.3:27246878-27246897 MS.gene68386:CDS 50.0%
GGAGTGATGGCAGGCCAAAT+TGG - chr1.3:27246817-27246836 MS.gene68386:CDS 55.0%
TATTGGCGTGGAGTGATGGC+AGG - chr1.3:27246808-27246827 MS.gene68386:CDS 55.0%
! AGGACCATGGACTGCTGAAG+AGG - chr1.3:27246873-27246892 MS.gene68386:CDS 55.0%
GGCTGCATGGTGAAGGCAGA+TGG - chr1.3:27246920-27246939 MS.gene68386:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 27246805 27248291 27246805 ID=MS.gene68386
chr1.3 mRNA 27246805 27248291 27246805 ID=MS.gene68386.t1;Parent=MS.gene68386
chr1.3 exon 27248132 27248291 27248132 ID=MS.gene68386.t1.exon1;Parent=MS.gene68386.t1
chr1.3 CDS 27248132 27248291 27248132 ID=cds.MS.gene68386.t1;Parent=MS.gene68386.t1
chr1.3 exon 27247575 27247704 27247575 ID=MS.gene68386.t1.exon2;Parent=MS.gene68386.t1
chr1.3 CDS 27247575 27247704 27247575 ID=cds.MS.gene68386.t1;Parent=MS.gene68386.t1
chr1.3 exon 27246805 27247291 27246805 ID=MS.gene68386.t1.exon3;Parent=MS.gene68386.t1
chr1.3 CDS 27246805 27247291 27246805 ID=cds.MS.gene68386.t1;Parent=MS.gene68386.t1
Gene Sequence

>MS.gene68386

ATGTATTGGCGTGGAGTGATGGCAGGCCAAATTGGTCATGGTATCATGGAGGAAGAGGTTTGGAGGAAAGGACCATGGACTGCTGAAGAGGATAGGTTGTTGATTGACTATGTTAGGCTGCATGGTGAAGGCAGATGGAACTCAGTTGCTAGGCTTACAGGTAATTACAAACCAATCTTTTTCTACTCGTTTCTCGTAATAGCGATCAAGGTTTTAAATTGCAGTTGCAGTAACTATTAAAGATATAGTTTGTTATCAATTAGATACTAGCTTACTATATCTCTAATAGTAGCATTGATAGTGATGGTGGTCTCATTGGTCATGTCTACGATGGATCTCTTGAATTTTATCTGCTATAGCAATAGGAAGTTAACATAATATTTCCTTACCTGCTATAGTAGATAAGTTTCAAGAGGTCCATTGCAGAGACATGAAAAAAAATATATGTTGCGGTTCAAATTGCTATCACAGGAAAGTTGCTTATAACTTGTACTCTTCAACCATGATCAAGTTTTTTGTTAGCTGTTTATTTTTCAACTATGATCAAGTTGTTATGTAGCTTAATTTATTGTTTTTATTGTGAATAGGATTGAAAAGGAATGGAAAGAGTTGCAGATTGAGGTGGGTGAATTATCTAAGACCTGATCTCAAAAGGGGTCAAATAACACCACAAGAAGAAAGCATAATATTAGAGCTTCATGCTAGGTGGGGAAACAGGTAAATTTCTTAAATCCTCAAATATTTTTGAGCTACATGTTTTTTTATGATTGGCAATTAAGTAACCCGACACTTCTTATAGAAGGAGTCTCCAGTAAGACGTGTTGGTGTCAGGTAGTGACATGACACTAACACATATAAATATATTCAATTAATTCAACTATTCAAATCATTATCTGTGTATCAATGCGTCAGTGTCGTATTTGGTGTCAATGTCTATGTTTCATATACTGGCAAAGGTGTTTGAATCAAGGACTTGACCAATAAATTTGTAAATTTTCAGATGGTCAACAATTGCAAGAAGTTTACCAGGAAGAACAGACAATGAAATAAAGAATTACTGGAGGACTCATTTCAAGAAAAAAGCAAAAAATCCATTTGATGCTTCCGAAAAGGCGAAAAACCGATTTCTGAGAAAGCAGTTATTTCACCAGCAGCAACAACAACAACAATTGCAGCAGCAGCAGCAACAACAACAACTGCAATTCAACTTGGACATGAAAGGTGTCATGTCCATGTTTGAGGAAAACAATAGCCATAGAATTCCTTATATATCTCAAGCCAGACAAGAAATTTTCAACATGTATCCAAATACAACAGATGATCAGGGTTACTTTATGCTCAATGGAAACTCTTCTGTACCTAATGCAACAGAAGATGATAGTTTGTTGGATGGTCTGTGGAATTTGGATGATGTTCAAGGAAATTTCAGTGTTGCTAATGCAACAAACAAAGCTGGTCTATATAATTTAGTTGCTCCTTACTGTTAG
Protein sequence

>MS.gene68386.t1

MYWRGVMAGQIGHGIMEEEVWRKGPWTAEEDRLLIDYVRLHGEGRWNSVARLTGLKRNGKSCRLRWVNYLRPDLKRGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKNPFDASEKAKNRFLRKQLFHQQQQQQQLQQQQQQQQLQFNLDMKGVMSMFEENNSHRIPYISQARQEIFNMYPNTTDDQGYFMLNGNSSVPNATEDDSLLDGLWNLDDVQGNFSVANATNKAGLYNLVAPYC